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Homologs of hrpR gene of NC_004578_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpR
( NP_791206.1 )

type III transcriptional regulator HrpR

NC_004578
(Pseudomonas syringae DC3000)

5e-146

100

2) hrpR
( YP_273529.1 )

type III transcriptional regulator HrpR

NC_005773
(Pseudomonas syringae 1448A)

2e-134

3) HrpR
( YP_234282.1 )

type III transcriptional regulator HrpR

NC_007005
(Pseudomonas syringae B728a)

5e-130

4) Pmen_0033
( YP_001185540.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

1e-94

5) hrpS
( NP_791207.1 )

type III transcriptional regulator HrpS

NC_004578
(Pseudomonas syringae DC3000)

2e-83

6) Pmen_0032
( YP_001185539.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

4e-82

7) HrpS
( YP_234283.1 )

type III transcriptional regulator HrpS

NC_007005
(Pseudomonas syringae B728a)

3e-81

8) rspS
( YP_006322245.1 )

type III secretion system transcriptional regulator RspS

NC_017911
(Pseudomonas fluorescens A506)

9e-80

9) hrpS
( YP_003883235.1 )

HrpS type III protein secretion system regulatory protein

NC_014500
(Dickeya dadantii 3937)

2e-79

10) Dd586_1893
( YP_003333457.1 )

sigma54 specific transcriptional regulator, Fis family

NC_013592
(Dickeya dadantii Ech586)

5e-78

11) Dd1591_1896
( YP_003004225.1 )

sigma54 specific transcriptional regulator, Fis family

NC_012912
(Dickeya zeae Ech1591)

7e-78

12) PCC21_022790
( YP_006646935.1 )

HrpS

NC_018525
(Pectobacterium carotovorum PCC21)

2e-77

13) hrpS
( YP_273530.1 )

type III transcriptional regulator HrpS

NC_005773
(Pseudomonas syringae 1448A)

4e-77

14) hrpS
( YP_050185.1 )

sigma-54-dependent enhancer-binding protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-76

15) PC1_2201
( YP_003017776.1 )

Fis family sigma-54 specific transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

2e-76

16) Ser39006_2908
( YP_008523290.1 )

sigma54 specific transcriptional regulator, Fis family

NC_022268
(Serratia sp. ATCC 39006)

1e-75

17) hrpS
( YP_005210952.1 )

protein HrpS

NC_016830
(Pseudomonas fluorescens F113)

9e-75

18) PSEBR_a5366
( YP_004356874.1 )

Fis family transcriptional regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

1e-74

19) rspR
( YP_002870393.1 )

putative type III secretion system, regulatory protein

NC_012660
(Pseudomonas fluorescens SBW25)

3e-72

20) hrpS
( YP_005804080.1 )

Sigma-54-dependent enhancer-binding protein HrpS

NC_017390
(Erwinia pyrifoliae DSM 12163)

3e-71

21) hrpS
( YP_002650063.1 )

Hrp/hrc secretion/translocation pathway protein HrpS

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-71

22) hrpS
( YP_001906474.1 )

Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-70

23) hrpS
( YP_005818266.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein

NC_017445
(Erwinia sp. Ejp617)

5e-71

24) hrpS
( YP_003539957.1 )

sigma-54-dependent enhancer-binding protein

NC_013971
(Erwinia amylovora ATCC 49946)

3e-69

25) hrpS
( YP_003529897.1 )

sigma-54-dependent enhancer-binding protein HrpS

NC_013961
(Erwinia amylovora CFBP1430)

3e-69

26) D781_3924
( YP_007346299.1 )

sigma-54 interacting regulator

NC_020064
(Serratia marcescens FGI94)

5e-67

27) H045_00470
( YP_007395666.1 )

type III secretion system transcriptional regulator RspS

NC_020209
(Pseudomonas poae RE*1-1-14)

2e-63

28) AciX8_2166
( YP_005057520.1 )

Fis family sigma-54 specific transcriptional regulator

NC_016631
(Granulicella mallensis MP5ACTX8)

1e-42

29) Nhal_2343
( YP_003527818.1 )

Fis family transcriptional regulator

NC_013960
(Nitrosococcus halophilus Nc 4)

2e-41

30) MCA0447
( YP_112977.1 )

sigma-54 dependent DNA-binding response regulator

NC_002977
(Methylococcus capsulatus Bath)

3e-39

31) Sala_0205
( YP_615262.1 )

sigma-54 dependent trancsriptional regulator

NC_008048
(Sphingopyxis alaskensis RB2256)

2e-37

32) PputGB1_5223
( YP_001671441.1 )

putative sigma-54 specific transcriptional regulator

NC_010322
(Pseudomonas putida GB-1)

1e-36

33) Atc_1480
( YP_004748829.1 )

flagellar regulatory protein fleQ

NC_015850
(Acidithiobacillus caldus SM-1)

2e-36

34) PPS_5018
( YP_004704425.1 )

sigma-54 dependent transcriptional regulator

NC_015733
(Pseudomonas putida S16)

2e-36

35) PPUBIRD1_4959
( YP_005932714.1 )

Sigma-54 dependent transcriptional regulator

NC_017530
(Pseudomonas putida BIRD-1)

2e-36

36) PP_5166
( NP_747267.1 )

Fis family transcriptional regulator

NC_002947
(Pseudomonas putida KT2440)

2e-36

37) B479_25340
( YP_007231900.1 )

sigma-54 dependent transcriptional regulator

NC_019905
(Pseudomonas putida PC9)

2e-36

38) SCE1572_16595
( YP_008149739.1 )

hypothetical protein

NC_021658
(Sorangium cellulosum So0157-2)

1e-35

39) Mmc1_0097
( YP_864032.1 )

sigma-54 dependent trancsriptional regulator

NC_008576
(Magnetococcus marinus MC-1)

2e-35

40) AvCA_31690
( YP_007894117.1 )

Sigma54 -dependent activator protein

NC_021149
(Azotobacter vinelandii CA)

6e-34

41) AvCA6_31690
( YP_007899166.1 )

Sigma54 -dependent activator protein

NC_021150
(Azotobacter vinelandii CA6)

6e-34

42) Avin_31690
( YP_002800307.1 )

Sigma54 -dependent activator protein

NC_012560
(Azotobacter vinelandii DJ)

6e-34

43) Pfl01_0222
( YP_345955.1 )

response regulator receiver domain-containing protein

NC_007492
(Pseudomonas fluorescens Pf0-1)

1e-30

44) PCA10_01930
( YP_008100530.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

5e-30

45) MCA1102
( YP_113572.1 )

sigma-54 dependent transcriptional regulator

NC_002977
(Methylococcus capsulatus Bath)

2e-29

46) tyrR
( YP_248124.1 )

transcriptional regulatory protein TyrR

NC_007146
(Haemophilus influenzae 86-028NP)

3e-29

47) CGSHiGG_05235
( YP_001292363.1 )

transcriptional regulatory protein TyrR

NC_009567
(Haemophilus influenzae PittGG)

3e-29

48) tyrR
( YP_008544823.1 )

transcriptional regulatory protein TyrR

NC_022356
(Haemophilus influenzae KR494)

6e-29

49) HIBPF19250
( YP_004136266.1 )

transcriptional regulatory protein tyrr

NC_014920
(Haemophilus influenzae F3031)

1e-28

50) CGSHiEE_00945
( YP_001290062.1 )

transcriptional regulatory protein

NC_009566
(Haemophilus influenzae PittEE)

1e-28

51) HIB_05210
( YP_005178551.1 )

transcriptional regulatory protein TyrR

NC_016809
(Haemophilus influenzae 10810)

2e-28

52) HICON_10040
( YP_004138150.1 )

transcriptional regulatory protein TyrR

NC_014922
(Haemophilus influenzae F3047)

2e-28

53) tyrR
( YP_005828687.1 )

Tyrosine repressor protein TyrR

NC_017452
(Haemophilus influenzae R2846)

2e-28

54) tyrR
( YP_005826887.1 )

Tyrosine repressor protein TyrR

NC_017451
(Haemophilus influenzae R2866)

2e-28

55) tyrR
( NP_438572.1 )

transcriptional regulatory protein

NC_000907
(Haemophilus influenzae Rd KW20)

2e-28

56) flbD1
( YP_007997535.1 )

transcriptional regulatory protein FlbD

NC_021237
(Pseudomonas fluorescens CHA0)

3e-27

57) PFL_0229
( YP_257375.1 )

sigma-54-binding protein

NC_004129
(Pseudomonas protegens Pf-5)

3e-27

• Sequence Alignments

1) hrpR in NC_004578


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  510 bits (1923),  Expect = 5e-146, Method: Compositional matrix adjust.
 Identities = 314/314 (100%), Positives = 314/314 (100%), Gaps = 0/314 (0%)

Query  1    MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG  60
            MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG
Sbjct  1    MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG  60

Query  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120
            PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA
Sbjct  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120

Query  121  KLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA  180
            KLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA
Sbjct  121  KLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA  180

Query  181  LRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLG  240
            LRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLG
Sbjct  181  LRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLG  240

Query  241  FPLLGADPVEALDPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMK  300
            FPLLGADPVEALDPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMK
Sbjct  241  FPLLGADPVEALDPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMK  300

Query  301  ELGVAAPIAATAGV  314
            ELGVAAPIAATAGV
Sbjct  301  ELGVAAPIAATAGV  314

2) hrpR in NC_005773


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  471 bits (1776),  Expect = 2e-134, Method: Compositional matrix adjust.
 Identities = 283/306 (93%), Positives = 296/306 (97%), Gaps = 0/306 (0%)

Query  1    MSTDIDKGVREYWDVTALSAGHQIVMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG  60
            MST+IDK+VRE W+VTALSAGHQI MNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG
Sbjct  1    MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG  60

Query  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120
            PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA
Sbjct  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120

Query  121  KLLRVLESRGVERLGSTEFIPLDLRVIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA  180
            KLLRVLESRG+ERLGSTEFIP+DLR+IASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA
Sbjct  121  KLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA  180

Query  181  LRKRREQILPLFDQFTQEIAAEFQRPVPVLDNGRVQILLSHDWPGNVRELKSAAKRFVLG  240
            LRKRREQILPLFDQFTQ IAAEF RP P LD+GRVQ+LLSHDWPGN+RELKSAAKRFVLG
Sbjct  181  LRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLG  240

Query  241  FPLLGAEPMDARDPVTGLRMQMRVIEKMLIQDALKRHRHNVDAVLQELELPRRTLYHRMK  300
            FPLLGA+P++A DP TGLR QMR+IEKMLIQDALKRHRHN DAVLQELELPRRTLYHRMK
Sbjct  241  FPLLGADPVEALDPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMK  300

Query  301  ELGVAA  306
            ELGVAA
Sbjct  301  ELGVAA  306

3) HrpR in NC_007005


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  457 bits (1721),  Expect = 5e-130, Method: Compositional matrix adjust.
 Identities = 272/309 (89%), Positives = 295/309 (96%), Gaps = 0/309 (0%)

Query  1    MSTDIDNDVLTCCNVTALSAGHQIVMNSVLMDMDLLLCGETGTGKDTLASRIHELSSRTG  60
            MST+ID+DV  C  VTALSAGHQI MNS ++DMDLLLCGETGTGKDTLA+RIHELSSR+G
Sbjct  1    MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG  60

Query  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120
            PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA
Sbjct  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120

Query  121  KLLRVLESRGVERLGSTDFIPLDLRVIASAQRPLDELVEQGLFRRDLFFRLNVLTLQLPA  180
            KLLRVLESRG+ERLGST+FIP+DLR+IASAQRPLDELVEQGLFRRDLFFRLNVLTL+LPA
Sbjct  121  KLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA  180

Query  181  LRKRREQILPLFDQFTQDVAAESGRSVPTLDNRRVQILLSHDWPGNVRELKSAAKRFVLG  240
            LRKRREQILPLFDQFTQ++AAE GR+ P+LD+ RVQ+LLSHDWPGN+RELKSAAKRFVLG
Sbjct  181  LRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLG  240

Query  241  LPLLGAEPVEARDPVTGLRMQMRVIEKMLIQDALKRHRHNFDAVLEELELPRRTLYHRMK  300
            +PLLGA+PVEA DP TGLR QMR+IEKMLIQDALKRHRHNFDAVL+ELELPRRTLYHRMK
Sbjct  241  FPLLGADPVEALDPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMK  300

Query  301  ELGVASHID  309
            ELGVA+ I 
Sbjct  301  ELGVAAPIA  309

4) Pmen_0033 in NC_009439


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  339 bits (1273),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 194/309 (63%), Positives = 257/309 (84%), Gaps = 5/309 (1%)

Query  1    MSRGVAAEKSARRHGGTDVPELGITLSAGHFRMDLLLCGETGTGKDVLARHIHDLSGRTG  60
            MS G+  +    +   +  +   I+++++ + MDLLLCGETGTGKD LA +IH+LS+R+G
Sbjct  1    MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG  60

Query  61   AFVGINCAAIPEALAESQLFGVASGAFTGANRSRQGYIEASNDGTLYLDEIDSMPLQLQA  120
            +FVG+NCAAIPE+LAESQLFGV +GAFTG  R+R+GYIEAS++GTLYLDEIDSMPL LQA
Sbjct  61   PFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQA  120

Query  121  KLLRVLETRGVERLGTTKFIPLNLRIIASTQRPLEELVEQGLFRRDLLFRLNAMTLSLPP  180
            KLLRVLE+RG+ERLG+T FIP++LRIIAS+QRPL+ELVEQGLFRRDL+FRLN +TL LP+
Sbjct  121  KLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPA  180

Query  181  LRQRRELILPLFKRFTRSLGAKQANGAQALDSQLIQLLLSHPWPGNIRELKSAAKRYVIG  240
            LR+RRE ILPLF +FT++++A  +  A ALDS  +QLLLSH WPGNIRELKSAAKR+V+G
Sbjct  181  LRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLG  240

Query  241  LPPIDAGVLADLEDGDFPHDRGLKKRMRAVEKMLIQDALKRHKNGLEAVAEELGISRRTL  300
            +P ++A+ +  L+ +      GL+ +MR +EKMLIQDALKRH++ ++AV +EL ++RRTL
Sbjct  241  FPLLGADPVEALDPAT-----GLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTL  295

Query  301  YQRIKELDV  309
            Y+R+KEL+V
Sbjct  296  YHRMKELGV  304

5) hrpS in NC_004578


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  302 bits (1131),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 178/274 (65%), Positives = 232/274 (85%), Gaps = 0/274 (0%)

Query  29   LGIDVLLSGETGTGKDTIARRIHEMSGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGA  88
            L++D+LL GETGTGKDT+A RIHE+S+R G +V+MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  89   DRSRVGYVEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDICVIASA  148
             R+R GY+EA+ GGTLYLDEIDSMPLSLQAKLLRVLE+R++ERLGST  I +D+ +IASA
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  149  QCSLDDAVERGQFRRDLYFRLNVLTLKLPPLRNQSDRIVPLFTRFTAAAARELGVPVPDV  208
            Q +LD+ VE+G FRRDL+FRLNVLTL LP+LR++ ++I+PLF +FT + A E+G P P +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  209  CPLLHKVLLGHDWPGNIRELKAAAKRHVLGFPLLGAEPQGEEHLACGLKSQLRVIEKALI  268
             +   ++LL+HDWPGNIRELK+AAKR VLGFPLLGA+P    + A GL++Q+R+IEK LI
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  269  QESLKRHDNCVDSVSLELDVPRRTLYRRIKELQI  302
            Q++LKRH +  D+V  EL++PRRTLY+R+KEL +
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304

6) Pmen_0032 in NC_009439


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  297 bits (1114),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 172/274 (63%), Positives = 235/274 (86%), Gaps = 2/274 (0%)

Query  30   LNIDVLLTGETGSGKDTLAQYLHKLSGRKGPFVAMNCAAIPESLFESELFGVTSGAYTGA  89
            L++D+LL GETG+GKDTLA+ +H LS+R GPFV+MNCAAIPESL ES+LFGV +GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  90   DHSRMGYVEAAQGGTLYLDEIDSMPAFLQAKLLRVLETRQIERLGSTTPVPLDICVVASA  149
             ++R GY+EA+ GGTLYLDEIDSMP  LQAKLLRVLE+R IERLGST  +P+D+ ++ASA
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  150  QRSLDALVEQGEFRRDLYFRLNVLTLRLPALRQKREWIIPMFERFAFEASQDMDTALPVI  209
            QR+LD LVEQG FRRDL+FRLNVLTL+LPALR++RE I+P+F++F+   + + + + P +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  210  DPAIEHVLLNHDWPGNLRELKSAAKRHVLGINLLGIEAEQPIE--CDLKCQLRLIEKVLI  267
            D++  ++LL+HDWPGN+RELKSAAKR VLG+ LLG ++ ++++   +L+ Q+R+IEK+LI
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  268  QESLQRHEHCIEAVLHELDIPRRTLYHRMKELDV  301
            Q++L+RH H ++AVL+EL++PRRTLYHRMKEL+V
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304

7) HrpS in NC_007005


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  295 bits (1104),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 179/274 (66%), Positives = 227/274 (83%), Gaps = 0/274 (0%)

Query  29   LGIDVLLSGETGTGKDTIARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGAYTGA  88
            L++D+LL GETGTGKDT+A RIH++S+R G FV MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  89   DRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTINLDICVIASA  148
             R+R GYIEA+ GGTLYLDEIDSMPL+LQAKLLRVLE+R++ERLGST  I +D+ +IASA
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  149  QACLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELSVPIPDV  208
            Q  LD+ VE+G FRRDL+FRLNVLTL LP+LR + E+ILPLF +F  + A E++ P P +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  209  CPLLQQVLTGHHWPGNIRELKAAAKRHVLGFPLLGADSQTEEHLACGLKFQLRAIEKALI  268
             +   Q+L +H+WPGNIRELK+AAKR VLGFPLLGAD+    + A GL+ Q+R IEK LI
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  269  QQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302
            Q+ALKRHR+ +DA   EL++PRRTLY+R+KEL++
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304

8) rspS in NC_017911


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  290 bits (1085),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 172/293 (59%), Positives = 233/293 (80%), Gaps = 3/293 (1%)

Query  13   VSLIDGQEIETTLNNTAALNVDILLLGETGTGKDTLAQRIHRLSGRRGNFVAVNCAAIPE  72
             +L  G++I     N+A L++D+LL GETGTGKDTLA+RIH LS+R G FV++NCAAIPE
Sbjct  16   TALSAGHQIAM---NSAFLDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPE  72

Query  73   SLAESQLFGVNSGAYTGAVQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLRVLECRGVE  132
            SLAESQLFGV +GA+TG  ++R G++EA+  GTLYLDEIDSMPLSLQAKLLRVLE RG+E
Sbjct  73   SLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIE  132

Query  133  RLGSTRFISVDMRVIASAQQSLQIMVDQGAFRRDLYFRLNVVNIELPALRDRRERIIPLF  192
            RLGST FI+VD+R+IASAQ++L+ +V+QG FRRDL+FRLNV+ ++LPALR RRE+I+PLF
Sbjct  133  RLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLF  192

Query  193  LQMIQEEADQFNCTPPSPSDGLLHELLCHPWLGNVRELRSAAKRFVLGLPPLSAPACRQP  252
             Q  Q  A +F   +P+   G ++ LL H W GN+REL+SAAKRFVLG+P L+A +    
Sbjct  193  DQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEAL  252

Query  253  PPQTDLKARLQQIEKALIEESMYRHQHCVDTVAIELGVAKRTLYYRMKQLNIS  305
             P T+L+++++ IEK LI++++ RH+H  D+V  EL +++RTLY RMK+L ++
Sbjct  253  DPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVA  305

9) hrpS in NC_014500


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  289 bits (1082),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 163/282 (58%), Positives = 230/282 (82%), Gaps = 6/282 (2%)

Query  43   LNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCAAVPETLAESELFGVVSGAYTGA  102
            L++D++L GETGTGKDTLA RIH+LS+ +GP+V++NCAA+PE+LAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  103  SRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQFKPVDMRVIVAT  162
             R+R GY+E++  G L+LDEIDSMPL+LQAK+LRVLESRGIERLGST+F PVD+R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  163  QTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLFERFLLEASARLKRPAPGL  222
            Q PL+ LV++G FRRDL+FRL+ + ++LP+LR R E ILPLF++F    +A + RPAP+L
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  223  SAIIQEQLLMHGWPGNIRELKAAAERWVLGLSPVPIASDGDVQVMGEDTPLTSLKVRLRR  282
             +   + LL H+WPGNIRELK+AA R VLG+   P+ + + V+ ++   P T+L+ ++R 
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGF---PLLGADPVEALD---PATGLRTQMRI  264

Query  283  IERFLIQEALQRNDHCIDTVVNELGIPKRTLYHRIKLLNVAA  324
            IE+ LIQ+AL+R+ H +D+V++EL +P+RTLYHR+K L VAA
Sbjct  265  IEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAA  306

10) Dd586_1893 in NC_013592


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  284 bits (1063),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 161/280 (58%), Positives = 226/280 (81%), Gaps = 4/280 (1%)

Query  43   LHVDIVLEGETGTGKDTLARRIHQLSGCPGPLVAVNCAAVPETLAESELFGVVSGAYTGA  102
            L++D++L GETGTGKDTLA RIH+LS+ +GP+V++NCAA+PE+LAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  103  SRSRAGYLEIADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQFKPVNMRVIVAT  162
             R+R GY+E +  G L+LDEIDSMPL+LQAK+LRVLESRGIERLGST+F PV++R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  163  QTPLHKLVEKGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLFQRFLHDAAARLKRPVPGV  222
            Q PL+ LVE+G FRRDL+FRL+ + ++LP+LR R E ILPLF++F ++ AA + RP P++
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  223  SAMMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPVAADGGKAGNDTPLTSLKVRLRRIE  282
             +   + LL HDWPGNIRELK+AA R VLG++ +    +++      P T+L+ ++R IE
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLL----GADPVEALDPATGLRTQMRIIE  266

Query  283  RFLIQEALQRNDHCIDNVVHELGIPKRTLYHRIKLLNVAA  322
            + LIQ+AL+R+ H +D V++EL +P+RTLYHR+K L VAA
Sbjct  267  KMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAA  306

11) Dd1591_1896 in NC_012912


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  283 bits (1061),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 160/280 (58%), Positives = 227/280 (82%), Gaps = 4/280 (1%)

Query  43   LNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCAAVPETLAESELFGVVSGAYTGA  102
            L++D++L GETGTGKDTLA RIH+LS+ +GP+V++NCAA+PE+LAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  103  SRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQFKPVDMRVIVAT  162
             R+R GY+E++  G L+LDEIDSMPL+LQAK+LRVLESRGIERLGST+F PVD+R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  163  QTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTDIILPLFQRFLHDAAARLKLSVPGV  222
            Q PL+ LV++G FRRDL+FRL+ + ++LP+LR R + ILPLF++F ++ AA +  + P++
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  223  SVIMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPIVADGDGAESDTPLTSLKVRLRRIE  282
                 + LL HDWPGNIRELK+AA R VLG++    + ++D  E+  P T+L+ ++R IE
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFP----LLGADPVEALDPATGLRTQMRIIE  266

Query  283  RFLIQEALQRNDHCIDTVVSELGIPKRTLYHRIKLLNVAA  322
            + LIQ+AL+R+ H +D+V+ EL +P+RTLYHR+K L VAA
Sbjct  267  KMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAA  306

12) PCC21_022790 in NC_018525


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  282 bits (1057),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 162/285 (57%), Positives = 226/285 (80%), Gaps = 4/285 (1%)

Query  68   LNVDIVLEGETGTGKDTLANRIHQLSRCSGPLVAVNCAAVPENLAESELFGVVSGAYTGA  127
            L++D++L GETGTGKDTLANRIH+LS  SGP+V++NCAA+PE+LAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  128  NRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQFTPVDMRVIVAT  187
             R+R GY+E++  G L+LDEIDSMP++LQAK+LRVLESRG+ RLGST+F PVD+R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  188  QTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQEAAVRLKMTLPPM  247
            Q PL +LVE+GLFRRDL+FRL+ + ++LP+LR R + ILPLF++F+Q  A  +    P++
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  248  TAEIHEQLLTHSWPGNIRELKAAADRWALGLSPLAEIQPL--LHPRPLQLKDRLKRIEKF  305
             +   + LL+H WPGNIRELK+AA R  LG+ PL   +P+  L+P +  L+ +++ IEK 
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGF-PLLGADPVEALDP-ATGLRTQMRIIEKM  268

Query  306  LIQDALRRHDHCIDDVIVELGIPKRTLYHRLKVLNVTAREMCAGG  350
            LIQDAL+RH H +D V+ EL +P+RTLYHR+K L V+A    ++G
Sbjct  269  LIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAPIAATAG  313

13) hrpS in NC_005773


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  281 bits (1052),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 177/274 (65%), Positives = 230/274 (84%), Gaps = 0/274 (0%)

Query  29   LGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGA  88
            L++D+LL GETGTGKDT+A+RIH +S+R G +V+MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  89   DRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASA  148
             R+R GYIEA+ GGTLYLDEIDSMPLSLQAKLLRVLE+R++ERLGST  I +D+ +IASA
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  149  QSSLDDAVEQGKFRRDLYFRLNVltlqlpplrtqpERILPLFKRFMAAAAKELNVASADV  208
            Q +LD+ VEQG FRRDL+FRLNVLTL+LP+LR + E+ILPLF +F  + A E+  +++ +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  209  CPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLRAIEKALI  268
             +   Q+LL+H+WPGNIRELK+AAKR VLGFP+LG DP    + A GL++Q+R IEK LI
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  269  QQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302
            Q++LKRHR+ +DA   EL++PRRTLY+R+KEL +
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304

14) hrpS in NC_004547


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  280 bits (1047),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 158/284 (56%), Positives = 225/284 (80%), Gaps = 2/284 (0%)

Query  66   LNVDIVLEGETGTGKDTLANRIHQISQCSGPLVAVNCAAVPENLAESELFGVVSGAYTGA  125
            L++D++L GETGTGKDTLANRIH++S  SGP+V++NCAA+PE+LAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  126  NRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQFTPVDMRVIVAT  185
             R+R GY+E++  G L+LDEIDSMP++LQAK+LRVLESRG+ RLGST+F PVD+R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  186  QTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQEAAVRLRMTLPPM  245
            Q PL +LVE+GLFRRDL+FRL+ + ++LP+LR R + ILPLF++F+Q  A  +    P++
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  246  TAEIDEQLLTHSWPGNIRELKAAADRWAMGLSPL-AEIQQLLHPRPLQLKDRLKRIEKFL  304
             +   + LL+H WPGNIRELK+AA R  +G++ L A+  + L+P +  L+ +++ IEK L
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDP-ATGLRTQMRIIEKML  269

Query  305  IQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNVTVREMCAGG  348
            IQDAL+RH H +D V+ EL +P+RTLYHR+K L V+     ++G
Sbjct  270  IQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAPIAATAG  313

15) PC1_2201 in NC_012917


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 160/285 (57%), Positives = 224/285 (79%), Gaps = 4/285 (1%)

Query  64   LNVDIVLEGETGTGKDTLANRIHRLSRCSGPLVAVNCAAVPENLAESELFGVVSGAYTGA  123
            L++D++L GETGTGKDTLANRIH LS  SGP+V++NCAA+PE+LAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  124  NRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQFTPVDMRVIVAT  183
             R+R GY+E++  G L+LDEIDSMP++LQAK+LRVLESRG+ RLGST+F PVD+R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  184  QTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQEAAVRLRMTQPPM  243
            Q PL +LVE+GLFRRDL+FRL+ + ++LP+LR R + ILPLF++F+Q  A  +    P++
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  244  TAEIYEQLLTHSWPGNIRELKAAADRWAMGLSPLAEIQPL--LHPRPLQLKDRLKRIEKF  301
             +   + LL+H WPGNIRELK+AA R  +G+ PL   +P+  L+P +  L+ +++ IEK 
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGF-PLLGADPVEALDP-ATGLRTQMRIIEKM  268

Query  302  LIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNVTVREMCAGG  346
            LIQDAL+RH H +D V+ EL +P+RTLYHR+K L V+     ++G
Sbjct  269  LIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAPIAATAG  313

16) Ser39006_2908 in NC_022268


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  276 bits (1033),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 159/282 (57%), Positives = 222/282 (79%), Gaps = 0/282 (0%)

Query  43   LNVDIVLEGETGTGKDTLARRIHKLSGCSGPLVAVNCAAIPESLAESELFGVVSGAYTGA  102
            L++D++L GETGTGKDTLA RIH LS+ SGP+V++NCAAIPESLAES+LFGVV+GA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  103  NRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLENRGIERLGSTQFKAVDMRVIVAT  162
             R+R GY+E++  G L+LDEIDSMPL+LQAK+LRVLE+RGIERLGST+F +VD+R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  163  QTPLSKLVEEGRFRRDLYFRLDTVKIQLPTLRSRIDIILPMFQRFTREASARLKRSSPPI  222
            Q PL  LVE+G FRRDL+FRL+ + ++LP+LR R + ILP+F++FT+  +A + R++P++
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  223  PVSVHERLLTHSWQGNIRELKAAAERWVLGLPPLPMVMETSAQHHPLLKERLRRIEKFLI  282
              +  + LL+H W GNIRELK+AA R VLG+P L      + +    L+ ++R IEK LI
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  283  QDALTRNGHCIDDVVTELGIPKRTLYHRIKLLNVRSANGCTP  324
            QDAL R+ H +D V+ EL +P+RTLYHR+K L V ++ + T+
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAPIAATA  312

17) hrpS in NC_016830


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  273 bits (1021),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 158/278 (57%), Positives = 225/278 (81%), Gaps = 1/278 (0%)

Query  30   LMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQLFGANTGAFTGA  89
            L +D+LL GETGTGKDTLA++IH +S+ SG FV++NCAAIPE+LAESQLFG   GAFTG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  90   SQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQNIPVNMRVIASA  149
             + R G++EA+  GTLYLDEIDSMPL+LQAKLLRVLESR ++RLGST+ IPV++R+IASA
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  150  QCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRREAQALDRPYVAP  209
            Q PL+E+VE+G FRRDL+FRLN+++L LP+LR R+E+I+PLF+ + +  A  ++RP  A 
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  210  SPALLRQLIGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKLKEHLQQFEKIL  269
             ++ ++ L++  WPGNIREL+SAAKR+VLG+P L  A+ +E   ++  L+ +++ +EK+L
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLG-ADPVEALDPATGLRTQMRIIEKML  269

Query  270  IEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQISTS  307
            I+D ++RH+H +D V+ EL ++RRTLY RMK L ++++
Sbjct  270  IQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAP  307

18) PSEBR_a5366 in NC_015379


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  272 bits (1019),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 159/278 (58%), Positives = 225/278 (81%), Gaps = 1/278 (0%)

Query  30   LMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQLFGANTGAFTGA  89
            L +D+LL GETGTGKDTLA++IH +S+ SG FV++NCAAIPE+LAESQLFG   GAFTG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  90   NQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQSIPVNMRVIASA  149
             + R G++EA+  GTLYLDEIDSMPL+LQAKLLRVLESR ++RLGST+ IPV++R+IASA
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  150  QCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRREAQALDRPYVAP  209
            Q PL+E+VE+G FRRDL+FRLN+++L LP+LR R+E+I+PLF+ + +  A  ++RP  A 
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  210  SPALLRQLLGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKLKEHLQQFEKIL  269
             ++ ++ LL+  WPGNIREL+SAAKR+VLG+P L  A+ +E   ++  L+ +++ +EK+L
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLG-ADPVEALDPATGLRTQMRIIEKML  269

Query  270  IEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQISTS  307
            I+D ++RH+H +D V+ EL ++RRTLY RMK L ++++
Sbjct  270  IQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAP  307

19) rspR in NC_012660


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  265 bits (990),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 162/284 (58%), Positives = 223/284 (79%), Gaps = 0/284 (0%)

Query  22   EEILSGTAQLNIDILLLGETGTGKDTLAQRIHRLSGRRGSFIAVNCAAIPETLAESQLFG  81
            ++I   +A L++D+LL GETGTGKDTLA+RIH LS+R G+F+++NCAAIPE+LAESQLFG
Sbjct  22   HQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFG  81

Query  82   VNSGAYTGAVQSRAGFIEAAHLGTLYLDEIDSMPLSLQAKLLRTLESRGVERLGSTRFIP  141
            V +GA+TG  ++R G+IEA+  GTLYLDEIDSMPLSLQAKLLR LESRG+ERLGST FIP
Sbjct  82   VVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIP  141

Query  142  VDMRVIASAQQSLYEMVERGTFRRDLYFRLSVVNIQLPSLRECRDRIIPLFLTMIRQEAE  201
            VD+R+IASAQ++L E+VE+G FRRDL+FRL+V+ ++LP+LR  R++I+PLF    +  A 
Sbjct  142  VDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAA  201

Query  202  SFKCPYpqppssllqqllCHPWPGNVRELSSTAKRFVLGLPPLSVRGKNPKISEASLKER  261
             F  P P   S+ +Q LL H WPGN+REL S+AKRFVLG+P L+    ++  + ++L+ +
Sbjct  202  EFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQ  261

Query  262  LQRIEKSLIEESLHRHNGNVDLAAADLRVAKRTFYYRMKQLGID  305
            ++ IEK LI+++L RH  N D    +L +++RT+Y RMK+LG+ 
Sbjct  262  MRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVA  305

20) hrpS in NC_017390


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  261 bits (977),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 156/277 (57%), Positives = 211/277 (77%), Gaps = 1/277 (0%)

Query  44   LKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESELFGINNGAYTGA  103
            L +DL+L GETGTGKDTLA +IH+LS+  G +V++NCAAIPE+LAES+LFG+ NGA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  104  GQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTQFTPVNMRVIVAT  163
             +AR GY+EA+  G L+LDEIDSMPLSLQAK+LRVLE+RG+ERLG+T+F PV++R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  164  QTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKAASTLQCAPREI  223
            Q PL  LVE+G FRRDL+FRLN ++++L +LR R E I+PLF  F Q  A+ +  ++  +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  224  TQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERPQ-LKELMRRIEKNVI  282
               + + LLS  WPGNIRELK+AA RFVLG+P LG     + + +  L+  MR IEK +I
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  283  HDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVATS  319
            +D L RH H++D   QEL +P RTLYHR+K L VA++
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAP  307

21) hrpS in NC_012214


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  261 bits (977),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 156/277 (57%), Positives = 211/277 (77%), Gaps = 1/277 (0%)

Query  44   LKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESELFGINNGAYTGA  103
            L +DL+L GETGTGKDTLA +IH+LS+  G +V++NCAAIPE+LAES+LFG+ NGA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  104  GQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTQFTPVNMRVIVAT  163
             +AR GY+EA+  G L+LDEIDSMPLSLQAK+LRVLE+RG+ERLG+T+F PV++R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  164  QTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKAASTLQCAPREI  223
            Q PL  LVE+G FRRDL+FRLN ++++L +LR R E I+PLF  F Q  A+ +  ++  +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  224  TQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERPQ-LKELMRRIEKNVI  282
               + + LLS  WPGNIRELK+AA RFVLG+P LG     + + +  L+  MR IEK +I
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  283  HDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVATS  319
            +D L RH H++D   QEL +P RTLYHR+K L VA++
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAP  307

22) hrpS in NC_010694


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 159/277 (58%), Positives = 211/277 (77%), Gaps = 1/277 (0%)

Query  44   LKIDLVLEGETGTGKDTLARKIHQLSGCSGKLVAVNCAAIPETLAESELFGINNGAYTGA  103
            L +DL+L GETGTGKDTLA +IH+LS+ SG +V++NCAAIPE+LAES+LFG+ NGA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  104  GQARAGYVEAAHNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRFTPVNMRVIVAT  163
             +AR GY+EA+  G L+LDEIDSMPLSLQAK+LRVLE+RG+ERLG+T F PV++R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  164  QTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEIIIPLFRYFIQQAATTLQCPQREI  223
            Q PL  LVE+G FRRDL+FRLN ++++L +LR R E I+PLF  F Q  A+ +  P   +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  224  TQEHYECLLSYGWPGNIRELKAAAERFVLGLPPLGF-SCHCEDERPRLKEMMRRIEKSLI  282
               + + LLS +WPGNIRELK+AA RFVLG+P LG  + +  D    L+  MR IEK LI
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  283  HDCLLRHGHSIDDAAQELGIPLRTLYHRIKLLNVTTS  319
            +D L RH H++D   QEL +P RTLYHR+K L V+++
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAP  307

23) hrpS in NC_017445


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  260 bits (973),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 156/277 (57%), Positives = 210/277 (76%), Gaps = 1/277 (0%)

Query  23   LKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESELFGINNGAYTGA  82
            L +DL+L GETGTGKDTLA +IH+LS+  G +V++NCAAIPE+LAES+LFG+ NGA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  83   GQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRFTPVNMRVIVAT  142
             +AR GY+EA+  G L+LDEIDSMPLSLQAK+LRVLE+RG+ERLG+T F PV++R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  143  QTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKAASTLQCAPREI  202
            Q PL  LVE+G FRRDL+FRLN ++++L +LR R E I+PLF  F Q  A+ +  ++  +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  203  TQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERPQ-LKELMRRIEKNVI  261
               + + LLS  WPGNIRELK+AA RFVLG+P LG     + + +  L+  MR IEK +I
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  262  HDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVATS  298
            +D L RH H++D   QEL +P RTLYHR+K L VA++
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAP  307

24) hrpS in NC_013971


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  255 bits (952),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 154/276 (56%), Positives = 207/276 (75%), Gaps = 1/276 (0%)

Query  44   LKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAIPETLAESELFGINNGAYTGA  103
            L +DL+L GETGTGKDTLA +IH+LS+  G +V++NCAAIPE+LAES+LFG+ NGA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  104  GQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRFTPVNMRVIVAT  163
             +AR GY+EA+  G L+LDEIDSMPLSLQAK+LRVLE+RG+ERLG+T F PV++R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  164  QTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPMFRSFIQKAASTLQCAPREI  223
            Q PL  LVE+G FRRDL+FRLN ++++L +LR R E I+P+F  F Q  A+ +  ++  +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  224  TQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDL-PCHCGQERPQLKELMRRIEKNVI  282
               + + LLS  WPGNIRELK+AA RFVLG+P L+  P +  +    L+  MR IEK +I
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  283  YDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVNT  318
             D L RH H++D   QEL +P RTLYHR+K L V +
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAA  306

25) hrpS in NC_013961


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  255 bits (952),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 154/276 (56%), Positives = 207/276 (75%), Gaps = 1/276 (0%)

Query  44   LKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAIPETLAESELFGINNGAYTGA  103
            L +DL+L GETGTGKDTLA +IH+LS+  G +V++NCAAIPE+LAES+LFG+ NGA+TG 
Sbjct  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  104  GQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRFTPVNMRVIVAT  163
             +AR GY+EA+  G L+LDEIDSMPLSLQAK+LRVLE+RG+ERLG+T F PV++R+I ++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  164  QTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPMFRSFIQKAASTLQCAPREI  223
            Q PL  LVE+G FRRDL+FRLN ++++L +LR R E I+P+F  F Q  A+ +  ++  +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  224  TQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDL-PCHCGQERPQLKELMRRIEKNVI  282
               + + LLS  WPGNIRELK+AA RFVLG+P L+  P +  +    L+  MR IEK +I
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270

Query  283  YDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNVNT  318
             D L RH H++D   QEL +P RTLYHR+K L V +
Sbjct  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAA  306

26) D781_3924 in NC_020064


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 160/288 (56%), Positives = 218/288 (76%), Gaps = 7/288 (2%)

Query  42   HKLTKIVAPLHVDVLLEGETGTGKDTLARRIYELSGGNGPFVPVNCGAIPESLAESELFG  101
            H+++   A L++D+LL GETGTGKDTLA RI ELS+ +GPFV +NC+AIPESLAES+LFG
Sbjct  22   HQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFG  81

Query  102  VEAGAYTGASHARAGYLETANNGILFLDEIDSMPLTVQAKLLRVLETRTITRLGSTKPIS  161
            V  GA+TG  +AR GY+E+++ G L+LDEIDSMPL++QAKLLRVLE+R I RLGST  I+
Sbjct  82   VVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIP  141

Query  162  LHLRVIVAAQTPLEQLVEAGRFRRDLCFRLNTIKLETPTLRSRPELIIPLFRRFAIESAL  221
            ++LR+I +AQ PL++LVE G FRRDL FRLN + L+ P+LR R E I+PLF +F+   A 
Sbjct  142  VDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAA  201

Query  222  RLGMPHPPRSTALDEALLLHCWPGNLRELKAAAERFILGLPPLN----QALPQESGAVLL  277
             +G P P+  ++  + LL H WPGN+RELK+AA RF+LG+P L     +AL   +G   L
Sbjct  202  EFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATG---L  258

Query  278  KERLKRIERSLIHDCLhrhdhriddvvhELGIPRRTLYHRLKQLNIHA  325
            + +++ IE+ LI+D L RH H +D V++EL +PRRTLYHR+K+L + A
Sbjct  259  RTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAA  306

27) H045_00470 in NC_020209


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 144/240 (60%), Positives = 195/240 (82%), Gaps = 0/240 (0%)

Query  1    MNCAAIPESLAESQLFGVNSGAFTGAMQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLR  60
            MNCAAIPESLAESQLFGV +GAFTG  ++R G++EA+  GTLYLDEIDSMPLSLQAKLLR
Sbjct  65   MNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLR  124

Query  61   VLESRGVERLGSTRFIPVDMRVIASAQHSLHAMVEQGTFRRDLFFRLNVVTIQLPALRDQ  120
            VLESRG+ERLGST FIPVD+R+IASAQ++L+ +VEQG FRRDLFFRLNV+T++LPALR +
Sbjct  125  VLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKR  184

Query  121  RERIVPLFLQMVRQEAELFECPAPTPTAELLQQLLCQSWLGNIRELRSTAKRFVlglppl  180
            RE+I+PLF Q  +  A  F  PAP+  +  +Q LL + W GNIREL+S+AKRFVLG+P L
Sbjct  185  REQILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLL  244

Query  181  spplsKPQGNEMSLKARLQEIEKALIEESMQRNDRCVDRVAIEMGIAKRTLYHRMKQLAI  240
            ++    + +   +L+++++ IEK LI+++++R+ +  D V  E+ +++RTLYHRMK+L++
Sbjct  245  GADPVEALDPATGLRTQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304

28) dctD in NC_011983


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  197 bits (731),  Expect = 8e-52, Method: Compositional matrix adjust.
 Identities = 120/277 (44%), Positives = 193/277 (70%), Gaps = 4/277 (1%)

Query  24   DVDVLVTGETGSGKEVVASLLHRWSRRAKGNFVALNCGALPETVIESELFGHEPGAFTGA  83
            D+D+L+ GETG+GK+ +A+ +H  S R+ G FV++NC+A+PE++ ES+LFG   GAFTG 
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  84   QKKRIGRIEHASAGTLFLDEIESMPPAVQVQLLRVLEMREVTPLGTNEVRPVDLRVVAAA  143
             + R G IE +S+GTL+LDEI+SMP ++Q +LLRVLE R +  LG+ E  PVDLR++A+A
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  144  KVDLGDPRQRGDFREDLYYRLNVVTISIPPLRDRRDDIPLLFGYFAERAASRFKRDVPTM  203
            +  L++  ++G FR DL++RLNV+T+ +P+LR RR++I  LF+ F++  A+ F R  P++
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  204  STAIRRHLQHHDWPGNVRELSHFAERFVLGLESAAGSKPGETPSTDTVLPLPARVERYEA  263
             ++  + L  HDWPGN+REL   A RFVLG+ +  G+ P E+    T L    R+   E 
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGF-PLLGADPVEALDPATGLRTQMRI--IEK  267

Query  264  DLIRETLAQNGGDVRRTIEALGIPRKTFYDKLQRHGI  300
             LI+++L ++  +    ++ L +PR+T+Y++++  G+
Sbjct  268  MLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304

29) Reut_B5077 in NC_007348


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  170 bits (627),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 113/282 (41%), Positives = 180/282 (64%), Gaps = 16/282 (5%)

Query  53   DVTMIAVGESGTGKEVVARAVHARSSRCEGPFVAVNCGAIQPTLIESELFGHEKGGFTGA  112
            D+ ++  GE+GTGK+ +A  +H  SSR  GPFV++NC+AI  +L ES+LFG  +G+FTG 
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSR-SGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  113  IDQKAGYFEQAQGGTLFLDEVTEMPLAMQVKLLRVLESCTFHRVGGDTMIATDVRILAAT  172
               + GY+E + GGTL+LDE+  MPL++Q KLLRVLES  ++R+G+   I+ D+RI+A++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  173  NRDPLDA-VRGGQLREDLLYRLAVFPLHIPPLRERVEDIIPLARHFLAEYNA-MERTDKV  230
            +R PLD  V  G +R DL++RL V+ LH+P+LR R E+I+PL  +F     A   R    
Sbjct  151  QR-PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPA  209

Query  231  FSAGTLERLTRYDWPGNVRELKNAVYRAFILADKVIEIGNPNLGSQPQRPNTVDGVVNVR  290
            + +G ++ L   DWPGN+RELK+A  + F+L       G P LG++P   +++D    +R
Sbjct  210  LDSGRVQLLLSHDWPGNIRELKSAA-KRFVL-------GFPLLGADP--VEALDPATGLR  259

Query  291  VGTTLADTQREIIMATLAHYNGDKRQAARALGISLKTLYNRL  332
              T +   ++ +I  +L +   +     + L ++ +TLY+R+
Sbjct  260  --TQMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRM  299

30) AciX8_2166 in NC_016631


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  167 bits (616),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 118/290 (41%), Positives = 186/290 (65%), Gaps = 9/290 (3%)

Query  43   DSTVLIEGETGTGKELIARAIHNLSPRSDQNYVRFNCAAIPLGLLESELFGYEKGAFTGA  102
            D  +L+ GETGTGK+ +A  IH+LS+RS+  +V  NCAAIP +L ES+LFG  +GAFTG 
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGP-FVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  103  VVRKLGRFELSNGGTLFLDEIGDIPLELQAKLLRVLQEQEFERLGSNLTQKVDVRIVAAT  162
               + G +E S+GGTL+LDEI+ +PL LQAKLLRVL+ + +ERLGS     VD+RI+A++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  163  HRNLKQMVKEKQFRSDLFFRLSVFPIFVPPLRDRREDIPMLVRAFVGNYVRRMGRRVETI  222
            +R L ++V +  FR DLFFRL+V+ + +P+LR RRE+I  L   F        GR   ++
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  223  PEETMSALVEHDWPGNVRELQNFIERAVILSPGLVLRAPLEGLDRPGECISSAPKTLAQM  282
                +  L+ HDWPGN+REL++   +  +L+  L+   P+E+LD P+  + +  + + +M
Sbjct  211  DSGRVQLLLSHDWPGNIRELKS-AAKRFVLGFPLLGADPVEALD-PATGLRTQMRIIEKM  268

Query  283  EFDHILQAVKETDWVIGGPMGAATKLGLKRTTLIAKMRKLGVSRSNEAIS  332
             +++ L+  ++    +++ +     L L R TL  +M+ LGV+ +  A +
Sbjct  269  LIQDALKRHRHN---FDAVL---QELELPRRTLYHRMKELGVAAPIAATA  312

31) Nhal_2343 in NC_013960


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  163 bits (602),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 126/295 (43%), Positives = 188/295 (64%), Gaps = 20/295 (6%)

Query  48   VLISGESGTGKEVLAHYIHRHSRCCEGPFVAINCAAIPENMLEATLFGYEKGAFTGAHQT  107
            +L+ GE+GTGK+ LA+ IH  S    GPFV++NCAAIPE++ E+ LFG  +GAFTG  ++
Sbjct  35   LLLCGETGTGKDTLANRIHELS-SRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCRA  93

Query  108  RPGKFEQAQGGTLLLDEISEMDLDLQAKLLRVLQEREVERLGGCKVIPLDVRILATTNQD  167
            R G +E + GGTL LDEI  M L LQAKLLRVL+ R +ERLG+   IP+D+RI+A++++ 
Sbjct  94   REGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQRP  153

Query  168  LREQIGNGQFREDLYYRLNVFPLQLPPLRERTQDIlplarrltasraaaVGRLPPRLTLA  227
            L E + +G FR DL++RLNV+ L+LP+LR R ++ILPL  ++T + AA  GR +P L  +
Sbjct  154  LDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDSG  213

Query  228  AETKLLAHPWPGNIRELDNVIQR---ALILEEGEAITAQALAFEAGMEAPLPRGVGELSK  284
                LL+H WPGNIREL +  +R   ++ L  ++++ A            L  + G L  
Sbjct  214  RVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEA------------LDPATG-LRT  260

Query  285  DLKSHEKQLILDTLARCGGRRKQAAAQLGISERTLRYKLARLRKAGVTIPDPSNT  339
            +++  EK LI D+L R          +L ++ RTL Y   R++  GV+ P ++ +
Sbjct  261  QMRIIEKMLIQDALKRHRHNFDAVLQELELPRRTL-YH--RMKELGVAAPIAATA  312

32) BMAA1984 in NC_006349


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

33) BMA10229_1294 in NC_008835


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

34) BMA10247_A2270 in NC_009079


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

35) BMASAVP1_1006 in NC_008784


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

36) BP1026B_II2423 in NC_017832


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

37) BURPS1106A_A3036 in NC_009078


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

38) BURPS668_A3165 in NC_009075


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

39) BPC006_II2986 in NC_018529


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

40) BPSS2250 in NC_006351


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

41) BDL_5724 in NC_021877


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  161 bits (594),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 93/228 (41%), Positives = 156/228 (69%), Gaps = 3/228 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES  I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  NPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKR-LSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + +  +     L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPVRRLAPRDDVR  260
              ++ L +  WPGN+REL++A  R ++L+   +   PV  L P  ++R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLR  259

42) BTI_4853 in NC_021174


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  160 bits (592),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 158/230 (69%), Gaps = 3/230 (1%)

Query  34   SVLIVGESGVGKDIVARLLHDMSPRRHGPFVPVNCGAIPRDIAESQLFGHEKGSFTGAAA  93
             +L+ GE+G GKD +A  +H++S+R  GPFV +NC+AIP  +AESQLFG  +G+FTG   
Sbjct  34   DLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  94   QHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNSITRVGGSEPIALDVRVVAATHH  153
             + G++EA+ GGT++LDE+  M+  LQ KLLR LES +I R+G++E I++D+R++A++++
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  154  DPAEAVQEGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNARH-RTRKRLSG  212
               E V++G FR DLF+RL V++L++PALR R ++I  + +++ + + A   R    L +
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  213  QALKTLRTYSWPGNVRELRNAIERAYILSDEQIEQLPLRRIAPRDDVRKH  262
              ++ L +  WPGN+REL++A  R ++L+   +   P+  + P  ++R +
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKR-FVLGFPLLGADPVEALDPATGLRTQ  261

43) MCA0447 in NC_002977


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  155 bits (572),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 99/231 (43%), Positives = 162/231 (71%), Gaps = 5/231 (2%)

Query  26   DVTVLIVGETGTGKELLARALQGHSLRADRPFVTLNCAALPASVAESELFGHRRGAFTGA  85
            D+ +L+ GETGTGK+ LA  ++  S R++ PFV +NCAA+P S+AES+LFG   GAFTG 
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSG-PFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  86   VSDFPGRLETADGGTLFLDEINSLPLPVQAKLLRFLDSGEIQPVGARAPQRVDVRIIAAT  145
                 G +E++ GGTL+LDEI+S+PL++QAKLLR L+S  I+ +G+     VD+RIIA++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  146  NANLADKIDKGEFRRDLYYRLSVVPLEIPPLRERGGDVELLLHHFMRHFAQTHAIPPAVF  205
            +  L + +++G FRRDL++RL+V+ L++P+LR R  ++  L+++F + +A   + P++ +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  206  GRGAVRRLIAYPWPGNIRELRNLCERLAI---LMPGRVIEEQDLPEEALRA  253
            + G V+ L++  WPGNIREL++   R+ +   L+ +  +E  D P  +LR+
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALD-PATGLRT  260

44) Sala_0205 in NC_008048


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  149 bits (550),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 102/242 (43%), Positives = 162/242 (67%), Gaps = 7/242 (2%)

Query  12   AAFQDAVDRASQAALLDRPVLVIGERGTGKELIAERLHRLSTRWDRPYVIMNCAAMPETL  71
            +A+  + + A ++A+LD  +L+ GE GTGK+ +A+R+H LS+R + P+V MNCAA+PE+L
Sbjct  16   TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELSSRSG-PFVGMNCAAIPESL  74

Query  72   IESELFGHEAGAFTGATRSRAGRFEEADGGTLFLDELATMSMGAQERLLRAVEYGEITRV  131
             ES+LFG   GAFTG  R+R G +E + GGTL+LDE+ +M+++ Q +LLR +E   I R+
Sbjct  75   AESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERL  134

Query  132  GASRPIRVDVRIVAATNEHLPALVEENRFRADLLDRLSFEVITLPPLRAREGDIEVLATY  191
            G++  I VD+RI+A+++  L  LVE+  FR DL+ RL+   + LP+LR R  +I  L   
Sbjct  135  GSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQ  194

Query  192  FGQRMAAVVGWDEWPGFGPRALAAMEGHDWPGNVRELRNVIERAVYRWGDP---TKPIDA  248
            F Q +AA  G+   P++++  +  + +HDWPGN+REL++   R  +  G P   + P++A
Sbjct  195  FTQGIAAEFGRPA-PALDSGRVQLLLSHDWPGNIRELKSAAKR--FVLGFPLLGADPVEA  251

Query  249  LS  250
            L 
Sbjct  252  LD  253

45) PputGB1_5223 in NC_010322


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  146 bits (539),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 94/231 (41%), Positives = 144/231 (63%), Gaps = 5/231 (2%)

Query  51   VPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAGSHGGTAS  110
            + +L+ GETGTGK+ LA +IH  S R+G FV++NCAAI+ + A+++LFG   G+  G   
Sbjct  33   MDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  111  SRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            +R G + +++GGTLYLDEI  +PL++Q+KLL  LE+R + R+G+ +  PVD+R++A++  
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQRPVPLVSE  230
             L  +V  G F   L+  L   +L+LP+LR R  +ILPL + F    +  + RP P +  
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  231  AAQQVLEAHFWPGNTRELEN-----VIHFALLVNDGAEILPEDLDLANPAR  276
            +  Q+L +H WPGN REL +     V+ F+LL  D  E L    +L    R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMR  263

46) Atc_1480 in NC_015850


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  146 bits (538),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 94/228 (42%), Positives = 154/228 (68%), Gaps = 4/228 (1%)

Query  19   LLLGESGTTGKEVVAQCLHQHSSRRNGPFVAVNCGAIPAELMESELFGHEKGAFTGALVA  78
            LLL     TGK+ +A+ +H+ SSR +GPFV++NC+AIP  L ES+LFG  +GAFTG   A
Sbjct  35   LLLCGETGTGKDTLANRIHELSSR-SGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCRA  93

Query  79   RKGRFELAEGGTLFLDEVAEMSPQMQVKLLRVLQERRFERVGGSRSLHANVRIIAATHRN  138
            R G +E + GGTL+LDE+  M+  +Q KLLRVL+ R +ER+G++  +  ++RIIA+++R 
Sbjct  94   REGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQRP  153

Query  139  LEDRIRENLFREDLYYRLNVFPVDLPPLRCRENDVRLLMEFFLKRQAAETGNLEVRLTEA  198
            L++ + + LFR DL++RLNV+ ++LP+LR R +++  L + F +  AAE G     L  +
Sbjct  154  LDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDSG  213

Query  199  AWRVLRDYHWPGNVRELQNLAERLSI---LHAGEEIDVEQLPERLRRH  243
              ++L   +WPGN+REL++ A R+ +   L +++ ++  + +  LR +
Sbjct  214  RVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQ  261

47) PPS_5018 in NC_015733


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  146 bits (536),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/231 (42%), Positives = 143/231 (62%), Gaps = 5/231 (2%)

Query  51   LPVLIRGETGTGKELLARQIHRASDRSGLFVSVNCAAISPTYADAELFGYSAGSQGGTAS  110
            + +L+ GETGTGK+ LA +IH  S RSG FV++NCAAI+ + A+++LFG   G+  G   
Sbjct  33   MDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  111  SRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            +R G + +++GGTLYLDEI  +PL++Q+KLL  LE+R + R+G+ +  PVD+R++A++  
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  171  DLARVVRAGRFNERLYQYLREGTLELPPLRERPGDILPLAEYFVGIYSVRLQRPVPLVSE  230
             L  +V  G F   L+  L   TL+LP+LR R  +ILPL + F    +  + RP P +  
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  231  AAQQALEAHPWPGNTRELEN-----VIHFALLLNDGEEILAEDLDLPDPAR  276
            +  Q L +H WPGN REL +     V+ F+LL  D  E L    +L    R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMR  263

48) PPUBIRD1_4959 in NC_017530


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 94/231 (41%), Positives = 145/231 (63%), Gaps = 5/231 (2%)

Query  51   LPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAGSHGGTAS  110
            + +L+ GETGTGK+ LA +IH  S R+G FV++NCAAI+ + A+++LFG   G+  G   
Sbjct  33   MDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  111  SRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            +R G + ++SGGTLYLDEI  +PL++Q+KLL  LE+R + R+G+ +  PVD+R++A++  
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFAGIYSVRLQRPVPLVSE  230
             L  +V  G F   L+  L   +L+LP+LR R  +ILPL + F+   +  + RP P +  
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  231  AAQRVLEGHFWPGNTRELEN-----VIHFALLVNDGEEILPEDLDLPDPAR  276
            +  ++L +H WPGN REL +     V+ F+LL  D  E L    +L    R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMR  263

49) B479_25340 in NC_019905


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 95/232 (41%), Positives = 143/232 (62%), Gaps = 5/232 (2%)

Query  50   SLPVLIRGETGTGKELLARQIHRASDRSGLFVSVNCAAISPTYADAELFGYSAGSQGGTA  109
             + +L+ GETGTGK+ LA +IH  S RSG FV++NCAAI+ + A+++LFG   G+  G  
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  110  SSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATS  169
             +R G + +++GGTLYLDEI  +PL++Q+KLL  LE+R + R+G+ +  PVD+R++A++ 
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  170  IDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQRPVPLVS  229
              L  +V  G F   L+  L   +L+LP+LR R  +ILPL + F    +  + RP P + 
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  230  EAAQQALEAHPWPGNTRELEN-----VIHFALLLNDGEEILAEDLDLPDPAR  276
             +  Q L +H WPGN REL +     V+ F+LL  D  E L    +L    R
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMR  263

50) PP_5166 in NC_002947


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  145 bits (535),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 94/231 (41%), Positives = 145/231 (63%), Gaps = 5/231 (2%)

Query  51   LPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAGSHGGTAS  110
            + +L+ GETGTGK+ LA +IH  S R+G FV++NCAAI+ + A+++LFG   G+  G   
Sbjct  33   MDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR  92

Query  111  SRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            +R G + ++SGGTLYLDEI  +PL++Q+KLL  LE+R + R+G+ +  PVD+R++A++  
Sbjct  93   AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQR  152

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFAGIYSVRLQRPVPLVSE  230
             L  +V  G F   L+  L   +L+LP+LR R  +ILPL + F+   +  + RP P +  
Sbjct  153  PLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDS  212

Query  231  AAQRVLEGHFWPGNTRELEN-----VIHFALLVNDGEEILPEDLDLPDPAR  276
            +  ++L +H WPGN REL +     V+ F+LL  D  E L    +L    R
Sbjct  213  GRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMR  263

51) SCE1572_16595 in NC_021658


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  143 bits (526),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 119/282 (43%), Positives = 189/282 (68%), Gaps = 7/282 (2%)

Query  31   LPVLILGETGTGKEVVAEWIAGMSRHPRERFVKVNCAslseslveselFGHERGAFTGAV  90
            + +L+ GETGTGK+ +A++I  +S ++   FV +NCA+++ESL ES+LFG   GAFTG  
Sbjct  33   MDLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  91   APREGLFEAAHEGTLFLDEVGELSPRTQAKLLRTLEYGEIVRVGSTRPRRVDVRVIAATH  150
             +REG +EA+  GTL+LDE++ ++   QAKLLR LE   I R+GST    VD+R+IA+++
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  151  RDLEQMVRDGDFRQDLYFRLNAVTLRIPPLRARTTEVlplaelfaarlarrlgrpaprla  210
            R L+++V +G FR+DL+FRLN +TL++P+LR R  ++LPL + F+  +A  +GRPAP L 
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  211  peaTAALLAHTWPGNIRELRHVIDRAVVMSKGGPIVADHLMLEAPREKADAGIKGDLRTF  270
            +     LL+H WPGNIREL+    R V+   G P+++ +         + +G++ ++R +
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVL---GFPLLGAD---PVEALDPATGLRTQMRII  265

Query  271  ERDRIVAALDRTRQNQTRAAELLGVSRRTLTNKLNAYGIARP  312
            E+  I  AL R R+N     + L ++RRTL ++++  G+A P
Sbjct  266  EKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGVAAP  307

52) Mmc1_0097 in NC_008576


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  142 bits (524),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 119/285 (42%), Positives = 182/285 (64%), Gaps = 16/285 (5%)

Query  31   NVTVLITGESGTGKERIGHLVHAESRRNKGPWVPVNCAALQDNLAESELFGHVRGAFTGA  90
            ++ +L+ GE+GTGK+ +++ +H  S R+ GP V +NCAA+ ++LAES+LFG V GAFTG 
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  91   TDAHQGRVRASSGGTLFLDEVGELSLPLQAKLLRLLENSECQVVGQAQPVRVDIRIVAAT  150
              A++G + ASSGGTL+LDE++ ++L+LQAKLLR+LE+   + +G ++ + VD+RI+A++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  151  NVDLAQRVREGLFREDLFYRLNIApltlpplrdrprdipllmdHFLLEAAARFERKPPRF  210
            +  L + V +GLFR DLF+RLN+  L LP+LR R  +I  L D+F    AA F R +P +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  211  TSKALQQIQNHRWPGNIRELLNFCTRMVIYHGGEEVDLPALPVELRGTVPEVASGSPFDL  270
             S  +Q + +H WPGNIREL +   R V            L   L G+ P  A +++ +L
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAKRFV------------LGFPLLGADPVEALDPATGL  258

Query  271  PSQGVDLTAVERGLIKQALERATGNKSKAARLLGLTRDTLLYRLK  315
             +Q   +  +E+ LI++AL R   N     + L L R TL  R+K
Sbjct  259  RTQ---MRIIEKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMK  300

53) AvCA6_31690 in NC_021150


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  137 bits (505),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 98/243 (41%), Positives = 153/243 (63%), Gaps = 12/243 (4%)

Query  50   GLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTWAEAELFGHAAGAYAGSA  109
            ++ +L+ GE+GTGK+ LA +IH  S+R+G FV++NC+A++ + AE++LFG   GA++G  
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  110  CSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRVGTQQPTPVDVRLVAASS  169
             +R G + +++GGTLYLDEI+ +PL+LQ+KLL  LE+R + R+G+ +  PVD+R++A++ 
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  170  VDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEYFLGVYAQRLGLPLPQLG  229
              L + V  G F   L   L+   L+LPALR R  +ILPL + F    A  +G P P L+
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  230  TAAQFALERYSWPGNTRELES-----VIHFALLVCSDDEILPDHLNLPGAGAPLHTPLTI  284
            ++    L    WPGN REL S     V+ F+LL     E L       ++++ L+T + I
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEAL-------DPATGLRTQMRI  264

Query  285  IEE  287
            IE 
Sbjct  265  IEK  267

54) AvCA_31690 in NC_021149


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  137 bits (505),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 98/243 (41%), Positives = 153/243 (63%), Gaps = 12/243 (4%)

Query  50   GLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTWAEAELFGHAAGAYAGSA  109
            ++ +L+ GE+GTGK+ LA +IH  S+R+G FV++NC+A++ + AE++LFG   GA++G  
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  110  CSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRVGTQQPTPVDVRLVAASS  169
             +R G + +++GGTLYLDEI+ +PL+LQ+KLL  LE+R + R+G+ +  PVD+R++A++ 
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  170  VDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEYFLGVYAQRLGLPLPQLG  229
              L + V  G F   L   L+   L+LPALR R  +ILPL + F    A  +G P P L+
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  230  TAAQFALERYSWPGNTRELES-----VIHFALLVCSDDEILPDHLNLPGAGAPLHTPLTI  284
            ++    L    WPGN REL S     V+ F+LL     E L       ++++ L+T + I
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEAL-------DPATGLRTQMRI  264

Query  285  IEE  287
            IE 
Sbjct  265  IEK  267

55) Avin_31690 in NC_012560


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  137 bits (505),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 98/243 (41%), Positives = 153/243 (63%), Gaps = 12/243 (4%)

Query  50   GLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTWAEAELFGHAAGAYAGSA  109
            ++ +L+ GE+GTGK+ LA +IH  S+R+G FV++NC+A++ + AE++LFG   GA++G  
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  110  CSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRVGTQQPTPVDVRLVAASS  169
             +R G + +++GGTLYLDEI+ +PL+LQ+KLL  LE+R + R+G+ +  PVD+R++A++ 
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  170  VDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEYFLGVYAQRLGLPLPQLG  229
              L + V  G F   L   L+   L+LPALR R  +ILPL + F    A  +G P P L+
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  230  TAAQFALERYSWPGNTRELES-----VIHFALLVCSDDEILPDHLNLPGAGAPLHTPLTI  284
            ++    L    WPGN REL S     V+ F+LL     E L       ++++ L+T + I
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEAL-------DPATGLRTQMRI  264

Query  285  IEE  287
            IE 
Sbjct  265  IEK  267

56) Pfl01_0222 in NC_007492


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  127 bits (464),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 143/221 (65%), Gaps = 5/221 (2%)

Query  49   SISVLIRGETGTGKELLARHIHRASDRSGLFVSVNCGAISPTYADAELFgyaagsysgsa  108
             + +L+ GETGTGK+ LA +IH  S RSG FV++NC+AI+ + A+++LFG   G+++G  
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  109  ssragWFGSANGGTLYLDEIGDLPLPIQIKLLSALENHEVTRVGAHQPSPVDVRLVAATS  168
             +R G + +++GGTLYLDEI+ +PL++Q KLL  LE++ + R+G+ +  PVD+R++A++ 
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  169  IDLAQAVAAGKFHERLYHYLSEGHLELPALRARVGDILSLAEYFLGIYSQRLDLPVPLIS  228
              L + V  G F+  L+  L+   L+LPALR R  +IL+L + F    +  ++ P P + 
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  229  EAAQQVLEQHSWPGNTRELEN-----VIHFALLVSTGDEIL  264
             +  Q+L  H WPGN REL +     V+ F+LL +   E L
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEAL  252

57) PCA10_01930 in NC_021499


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  124 bits (455),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 94/221 (43%), Positives = 144/221 (66%), Gaps = 5/221 (2%)

Query  49   DLPVLIQGETGTGKELLARQIHRSSDRPGLFVAVSCSAISKSYAEAELFGHTPGAYNGAA  108
            D+ +L+ GETGTGK+ LA +IH  S R+G FV+++C+AI+ S AE++LFG   GA+ G  
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  109  SSRAGWFGSANGGTLYLDEIGDlplplqakllaalESREVTRVGAQQPTPVDVRLVAATS  168
             +R G + +++GGTLYLDEI+ +PL+LQAKLL  LESR + R+G+ +  PVD+R++A++ 
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  169  IDLAEAVRVGKFNARLYQYLNEGRVELPPLRERPDDILPLAEYFLGIYAQRLDLPLPLIS  228
              L E V  G F   L+  LN   ++LP+LR R ++ILPL + F    A  ++ P P + 
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  229  AAAQAVLEAYPWPGNTRELENSVH-----FALLVSEGDEIL  264
            ++   +L +  WPGN REL ++       F+LL ++  E L
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEAL  252

58) MCA1102 in NC_002977


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  123 bits (450),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 114/280 (41%), Positives = 181/280 (65%), Gaps = 7/280 (2%)

Query  120  EATVLVRGESGTGKELVARAVHAESHRAREPFLAVNCaalapslleselFGHVRGAFTGA  179
            +  +L+ GE+GTGK+ +A  +H  S R+  PF+++NCAA++ SL ES+LFG V GAFTG 
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRS-GPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90

Query  180  VRSHAGLFQRADGGTLFLDEVAELPLELQAKLLRVLQERSFVPVGGDRMLSVDVRIVAAT  239
             R++ G ++ + GGTL+LDE+  +PL LQAKLLRVL+ R++  +G+   ++VD+RI+A++
Sbjct  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150

Query  240  HRSLRDAVREGRFREDLMYrlrvvplflpplrerrrDIGLLLWHFIERHNARGLRRIVRI  299
            +R+L + V +G FR DL +RL V+ L LP+LR RR +I  L+ +F +   A   R    +
Sbjct  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210

Query  300  DPDAMRRLLDHAWPGNVRELQNVVEYAFAVGRGEVLELDDLPPEFRDERAGPQTSMEAVP  359
            D++ ++ LL H WPGN+REL++     F +G   +L  D  P E  D  +G +T M  + 
Sbjct  211  DSGRVQLLLSHDWPGNIRELKSAAK-RFVLGFP-LLGAD--PVEALDPATGLRTQMRII-  265

Query  360  DEADRIRTALRQSGGRIDQAARLLQMSRATLWRKRKKLGV  399
             E   I+ AL++    +D   + L+++R TL ++ K LGV
Sbjct  266  -EKMLIQDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304

59) tyrR in NC_007146


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  122 bits (445),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 140/223 (63%), Gaps = 8/223 (3%)

Query  13   ECFIVQSEAMKSAVENAKRFAMFDVPLLIQGETGTGKDLLAKACHYQSLRRDKKFIAVNC  72
            EC  V   A+ ++ + A   A +D+ LL+ GETGTGKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANEGTVLLDGIAELSLGLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++L+LQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTLNVPPLRERMTD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLTL++P+LR R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

60) CGSHiGG_05235 in NC_009567


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  122 bits (445),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 140/223 (63%), Gaps = 8/223 (3%)

Query  13   ECFIVQSEAMKSAVENAKRFAMFDVPLLIQGETGTGKDLLAKACHYQSLRRDKKFIAVNC  72
            EC  V   A+ ++ + A   A +D+ LL+ GETGTGKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANEGTVLLDGIAELSLGLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++L+LQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTLNVPPLRERMTD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLTL++P+LR R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

61) tyrR in NC_022356


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  121 bits (442),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 141/223 (64%), Gaps = 8/223 (3%)

Query  13   DCFVVQSEAMKSAVENAKRFAMFDVPLLIQGETGTGKDLLAKACHYQSLRRDKKFIAVNC  72
            +C  V   A+ ++ + A   A +D+ LL+ GETGTGKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANEGTVLLDGIAELSLGLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++L+LQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHFLVEQGKVRADLFHRLNVLTINVPALRNRVAD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLT+++PALR+R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

62) HIBPF19250 in NC_014920


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  120 bits (439),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 140/223 (63%), Gaps = 8/223 (3%)

Query  13   ECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQSLRRDKKFIAVNC  72
            EC  V   A+ ++ + A   A +D  LL+ GETG+GKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANKGTVLLDGIAELSLSLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++LSLQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPALRNRMAD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLT+++PALR+R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKISKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

63) CGSHiEE_00945 in NC_009566


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  120 bits (439),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 140/223 (63%), Gaps = 8/223 (3%)

Query  13   ECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQSLRRDKKFIAVNC  72
            EC  V   A+ ++ + A   A +D  LL+ GETG+GKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANKGTVLLDGIAELSLSLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++LSLQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPALRNRMAD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLT+++PALR+R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKISKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

64) HIB_05210 in NC_016809


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  119 bits (436),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 139/223 (63%), Gaps = 8/223 (3%)

Query  13   ECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQSLRRDKKFIAVNC  72
            EC  V   A+ ++ + A   A +D  LL+ GETG+GKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANKGTVLLDGIAELSLSLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++LSLQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPALRDRMAD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLT+++PALR R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

65) HICON_10040 in NC_014922


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  119 bits (436),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 139/223 (63%), Gaps = 8/223 (3%)

Query  13   ECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQSLRRDKKFIAVNC  72
            EC  V   A+ ++ + A   A +D  LL+ GETG+GKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANKGTVLLDGIAELSLSLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++LSLQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPALRDRMAD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLT+++PALR R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

66) tyrR in NC_017452


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  119 bits (436),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 139/223 (63%), Gaps = 8/223 (3%)

Query  13   DCFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQSLRRDKKFIAVNC  72
            +C  V   A+ ++ + A   A +D  LL+ GETG+GKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANKGTVLLDGIAELSLSLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++LSLQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPALRDRMAD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLT+++PALR R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

67) tyrR in NC_017451


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  119 bits (436),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 139/223 (63%), Gaps = 8/223 (3%)

Query  13   ECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQSLRRDKKFIAVNC  72
            EC  V   A+ ++ + A   A +D  LL+ GETG+GKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANKGTVLLDGIAELSLSLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++LSLQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPALRDRMAD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLT+++PALR R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKISKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

68) tyrR in NC_000907


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  119 bits (436),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 139/223 (63%), Gaps = 8/223 (3%)

Query  13   ECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQSLRRDKKFIAVNC  72
            EC  V   A+ ++ + A   A +D  LL+ GETG+GKD LA+  H  S  R   F+++NC
Sbjct  11   ECWGV--TALSAGHQIAMNSAFLDMDLLLCGETGTGKDTLANRIHELS-SRSGPFVGMNC  67

Query  73   AGLPDEDAESEMFGRKVGDSETI-----GFFEYANKGTVLLDGIAELSLSLQAKLLRFLT  127
            A++P+  AES++FG   G    +     G++E ++ GT+ LD I  ++LSLQAKLLR L 
Sbjct  68   AAIPESLAESQLFGVVNGAFTGVCRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLE  127

Query  128  DGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPALRDRMAD  187
              ++ R+G       ++R+I ++Q PL+ LVEQG  R DLF RLNVLT+++PALR R  +
Sbjct  128  SRGIERLGSTEFIPVDLRIIASAQRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQ  187

Query  188  IEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVREL  230
            I PL + F Q I+ E+  + P++D + +  L   DW GN+REL
Sbjct  188  ILPLFDQFTQGIAAEFGRPAPALDSGRVQLLLSHDWPGNIREL  230

69) flbD1 in NC_021237


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  115 bits (420),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 142/221 (65%), Gaps = 5/221 (2%)

Query  50   SVSVLIRGETGTGKELLARHIHRASDRSGLFVSVNCGAISPTYADAELfgyaagsfsgsa  109
             + +L+ GETGTGK+ LA +IH  S RSG FV++NC+AI+ + A+++LFG   G+F+G  
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  110  ssragwfgsaNGGTLYLDEIGDLPLPIQTKLLAALENHEVTRVGAQQPSPVDVRLVAATS  169
             +R G + +++GGTLYLDEI+ +PL++Q+KLL  LE++ + R+G+ +  PVD+R++A++ 
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  170  IDLAQAVAAGKFHERLYRYLSEGQLELPALRERVGDIESLAEYFLGIYSQRLDLPVPLIS  229
              L + V  G F+  L+  L+   L+LPALR R  +I +L + F    +  ++ P P + 
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  230  EAAQQALNRHSWPGNTRELEN-----VIHFALLVSSGEEIL  265
             +  Q L  H WPGN REL +     V+ F+LL +   E L
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEAL  252

70) PFL_0229 in NC_004129


> NC_004578_P1|23|G16|28868587|NP_791206.1|Pseudomonas_syringae_pv._tomato_str._DC3000|+|19895..20839|hrpR|PSPTO_1379|type 
III transcriptional regulator HrpR
Length=314

 Score =  115 bits (420),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 142/221 (65%), Gaps = 5/221 (2%)

Query  50   SVSVLIRGETGTGKELLARHIHRASDRSGLFVSVNCGAISPTYADAELfgyaagsfsgsa  109
             + +L+ GETGTGK+ LA +IH  S RSG FV++NC+AI+ + A+++LFG   G+F+G  
Sbjct  32   DMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVC  91

Query  110  ssragwfgsaNGGTLYLDEIGDLPLPIQTKLLAALENHEVTRVGAQQPSPVDVRLVAATS  169
             +R G + +++GGTLYLDEI+ +PL++Q+KLL  LE++ + R+G+ +  PVD+R++A++ 
Sbjct  92   RAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQ  151

Query  170  IDLAQAVAAGKFHERLYRYLSEGQLELPALRERVGDIESLAEYFLGIYSQRLDLPVPLIS  229
              L + V  G F+  L+  L+   L+LPALR R  +I +L + F    +  ++ P P + 
Sbjct  152  RPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALD  211

Query  230  EAAQQALNRHSWPGNTRELEN-----VIHFALLVSSGEEIL  265
             +  Q L  H WPGN REL +     V+ F+LL +   E L
Sbjct  212  SGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEAL  252