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Homologs of lscU gene of AY144116

28

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) sctU
( YP_003039882.1 )

type iii secretion component protein sctu

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

6e-158

96

2) sctU
( NP_930980.1 )

Type III secretion component protein SctU

NC_005126
(Photorhabdus luminescens TTO1)

1e-156

97

3) ascU
( YP_001144305.1 )

AscU protein

NC_009350
(Aeromonas salmonicida A449)

1e-129

79

4) YPDSF_3970
( YP_001154599.1 )

type III secretion protein

NC_009377
(Yersinia pestis Pestoides F)

1e-115

73

5) YE105_P0029
( YP_004424931.1 )

putative type III secretion protein

NC_015475
(Yersinia enterocolitica 105.5R(r))

9e-116

73

6) yscU
( YP_001004085.1 )

putative type III secretion protein

NC_008791
(Yersinia enterocolitica 8081)

9e-116

73

7) Y11_p0711
( YP_006007919.1 )

type III secretion inner membrane protein

NC_017565
(Yersinia enterocolitica Y11)

9e-116

73

8) yscU
( NP_995364.1 )

putative type III secretion protein YscU

NC_005813
(Yersinia pestis 91001)

2e-115

73

9) YPA_CD0015
( YP_636807.1 )

type III secretion protein

NC_008122
(Yersinia pestis Antiqua)

2e-115

73

10) yscU
( NP_395181.1 )

needle complex export protein

NC_003131
(Yersinia pestis CO92)

2e-115

73

11) yscU
( YP_005503179.1 )

needle complex export protein

NC_017153
(Yersinia pestis D106004)

2e-115

73

12) yscU
( YP_005506962.1 )

needle complex export protein

NC_017157
(Yersinia pestis D182038)

2e-115

73

13) yscU
( YP_003560538.1 )

needle complex export protein

NC_014017
(Yersinia pestis Z176003)

2e-115

73

14) pYV0074
( YP_068483.1 )

yscU; type III secretion protein

NC_006153
(Yersinia pseudotuberculosis IP 32953)

2e-115

73

15) YPTS_4292
( YP_001874692.1 )

YscU/HrpY family type III secretion protein

NC_010635
(Yersinia pseudotuberculosis PB1/+)

2e-115

73

16) yscU
( YP_001604479.1 )

type III secretion appartus protein YscU

NC_010157
(Yersinia pestis Angola)

3e-114

73

17) G655_16730
( YP_007710186.1 )

translocation protein in type III secretion

NC_020912
(Pseudomonas aeruginosa B136-33)

8e-90

71

18) PADK2_17250
( YP_006483431.1 )

translocation protein in type III secretion

NC_018080
(Pseudomonas aeruginosa DK2)

8e-90

71

19) pscU
( YP_002441221.1 )

translocation protein in type III secretion

NC_011770
(Pseudomonas aeruginosa LESB58)

8e-90

71

20) pscU
( YP_005975941.1 )

translocation protein in type III secretion

NC_017548
(Pseudomonas aeruginosa M18)

8e-90

71

21) pscU
( YP_005980832.1 )

translocation protein in type III secretion

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

8e-90

71

22) pscU
( NP_250381.1 )

translocation protein in type III secretion

NC_002516
(Pseudomonas aeruginosa PAO1)

8e-90

71

23) M062_08990
( YP_008132241.1 )

preprotein translocase U

NC_021577
(Pseudomonas aeruginosa RP73)

8e-90

71

24) pscU
( YP_791555.1 )

translocation protein in type III secretion

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

8e-90

71

25) HCH_03260
( YP_434444.1 )

type III secretory pathway subunit EscU

NC_007645
(Hahella chejuensis KCTC 2396)

9e-73

44

26) yscU
( YP_436220.1 )

type III secretory pathway subunit EscU

NC_007645
(Hahella chejuensis KCTC 2396)

5e-71

49

27) NH44784_014511
( YP_008028546.1 )

Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

3e-58

43

28) yscU
( YP_004677242.1 )

Yop proteins translocation protein U

NC_015717
(Hyphomicrobium sp. MC1)

3e-58

41