Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III secretion protein |
NC_004578 (Pseudomonas syringae DC3000) |
2e-19 |
100 |
|
HrpT protein |
NC_005773 (Pseudomonas syringae 1448A) |
5e-18 |
80 |
|
type III secretion protein HrpT |
NC_007005 (Pseudomonas syringae B728a) |
5e-18 |
77 |
|
protein HrpT |
NC_016830 (Pseudomonas fluorescens F113) |
1e-08 |
51 |
|
type III secretion protein |
NC_015379 (Pseudomonas brassicacearum NFM421) |
1e-08 |
50 |
|
putative type III secretion lipoprotein |
NC_020209 (Pseudomonas poae RE*1-1-14) |
3e-06 |
42 |
|
putative type III secretion lipoprotein |
NC_012660 (Pseudomonas fluorescens SBW25) |
3e-06 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF232004' AND ph.id_pai_orf='23' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc