Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
tyrosine recombinase-2 family protein |
NC_021082 (Mannheimia haemolytica M42548) |
5e-119 |
100 |
|
tyrosine recombinase-2 family protein |
NC_016808 (Pasteurella multocida 36950) |
5e-119 |
100 |
|
integrase |
NC_021743 (Mannheimia haemolytica D153) |
7e-117 |
97 |
|
integrase |
NC_021738 (Mannheimia haemolytica D171) |
7e-117 |
97 |
|
integrase |
NC_021739 (Mannheimia haemolytica D174) |
7e-117 |
97 |
|
tyrosine recombinase-2 family protein |
NC_021082 (Mannheimia haemolytica M42548) |
7e-117 |
97 |
|
Integrase |
NC_020833 (Mannheimia haemolytica USDA-ARS-USMARC-183) |
7e-117 |
97 |
|
Integrase |
NC_020834 (Mannheimia haemolytica USDA-ARS-USMARC-185) |
7e-117 |
97 |
|
integrase |
NC_021883 (Mannheimia haemolytica USMARC_2286) |
7e-117 |
97 |
|
integrase |
NC_021743 (Mannheimia haemolytica D153) |
8e-109 |
89 |
|
integrase |
NC_021739 (Mannheimia haemolytica D174) |
8e-109 |
89 |
|
integrase |
NC_021883 (Mannheimia haemolytica USMARC_2286) |
8e-109 |
89 |
|
Integrase |
NC_020833 (Mannheimia haemolytica USDA-ARS-USMARC-183) |
1e-108 |
89 |
|
Integrase |
NC_020834 (Mannheimia haemolytica USDA-ARS-USMARC-185) |
1e-108 |
89 |
|
XerC-like tyrosine recombinase Sss |
NC_021082 (Mannheimia haemolytica M42548) |
6e-92 |
91 |
|
integrase/recombinase |
NC_002940 (Haemophilus ducreyi 35000HP) |
1e-73 |
55 |
|
integrase |
NC_017846 (Aggregatibacter actinomycetemcomitans D7S-1) |
2e-71 |
53 |
|
integrase |
NC_012913 (Aggregatibacter aphrophilus NJ8700) |
2e-71 |
53 |
|
probable site-specific recombinase |
NC_017451 (Haemophilus influenzae R2866) |
1e-68 |
52 |
|
integrase |
NC_008309 (Haemophilus somnus 129PT) |
1e-67 |
56 |
|
site-specific recombinase |
NC_015964 (Haemophilus parainfluenzae T3T1) |
2e-63 |
50 |
|
site-specific recombinase |
NC_007146 (Haemophilus influenzae 86-028NP) |
3e-63 |
50 |
|
putative site-specific recombinase |
NC_016809 (Haemophilus influenzae 10810) |
7e-59 |
51 |
|
phage integrase family protein |
NC_010519 (Haemophilus somnus 2336) |
5e-56 |
45 |
|
tyrosine recombinase-1 family protein |
NC_016808 (Pasteurella multocida 36950) |
5e-56 |
45 |
|
phage integrase |
NC_011149 (Salmonella enterica SL483) |
2e-49 |
45 |
|
FIG00638672: hypothetical protein |
NC_020181 (Enterobacter aerogenes EA1509E) |
1e-48 |
44 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
2e-48 |
45 |
|
hypothetical protein |
NC_018650 (Escherichia coli 2009EL-2050) |
3e-48 |
45 |
|
hypothetical protein |
NC_018661 (Escherichia coli 2009EL-2071) |
3e-48 |
45 |
|
hypothetical protein |
NC_018658 (Escherichia coli 2011C-3493) |
3e-48 |
45 |
|
hypothetical protein |
NC_011748 (Escherichia coli 55989) |
4e-48 |
45 |
|
putative phage integrase |
NC_013654 (Escherichia coli SE15) |
1e-47 |
44 |
|
site-specific tyrosine recombinase XerC |
NC_015460 (Gallibacterium anatis UMN179) |
3e-42 |
43 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_016808_R1' AND ph.id_pai_orf='22' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc