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Homologs of CDC7B_2038 gene of NC_016801_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CDC7B_2038
( YP_005163479.1 )

transposase-like protein

NC_016801
(Corynebacterium diphtheriae C7 (beta))

4e-48

100

2) S4832
( NP_839235.1 )

IS3 orfB

NC_004741
(Shigella flexneri 2457T)

3e-11

3) SFV_3866
( YP_691181.1 )

IS3 ORF2

NC_008258
(Shigella flexneri 8401)

3e-11

4) M446_5596
( YP_001772331.1 )

integrase catalytic subunit

NC_010511
(Methylobacterium sp. 4-46)

6e-10

5) D781_1367
( YP_007343862.1 )

hypothetical protein

NC_020064
(Serratia marcescens FGI94)

1e-08

6) SFxv_5008
( YP_005712057.1 )

IS3 ORF2

NC_017319
(Shigella flexneri 2002017)

6e-05

7) CP0165
( NP_858298.1 )

IS3 ORF2

NC_004851
(Shigella flexneri 301)

6e-05

• Sequence Alignments

1) CDC7B_2038 in NC_016801


> NC_016801_P1|22|G21|376291232|YP_005163479.1|Corynebacterium_diphtheriae_C7_(beta)|+|19846..20184|-|CDC7B_2038|transposase-like 
protein
Length=112

 Score =  184 bits (681),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MAAQKAQFPIALMARLLEVSRAGFYQWFARRLAASDKQTARVRFDRMVRQLFFDYAQTHG  60
            MAAQKAQFPIALMARLLEVSRAGFYQWFARRLAASDKQTARVRFDRMVRQLFFDYAQTHG
Sbjct  1    MAAQKAQFPIALMARLLEVSRAGFYQWFARRLAASDKQTARVRFDRMVRQLFFDYAQTHG  60

Query  61   SPRLAAALQRDYGIQVDKKRVAASLKRQGLEAISTRQFRLPPRVRHGGDGPP  112
            SPRLAAALQRDYGIQVDKKRVAASLKRQGLEAISTRQFRLPPRVRHGGDGPP
Sbjct  61   SPRLAAALQRDYGIQVDKKRVAASLKRQGLEAISTRQFRLPPRVRHGGDGPP  112

2) S4832 in NC_004741


> NC_016801_P1|22|G21|376291232|YP_005163479.1|Corynebacterium_diphtheriae_C7_(beta)|+|19846..20184|-|CDC7B_2038|transposase-like 
protein
Length=112

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 40/98 (41%), Positives = 62/98 (64%), Gaps = 5/98 (5%)

Query  6   IENHRAEFSIKAMCRVLRVARSGWYVWLRRRHQMSLRQQFRLTCDAAVHKAFFEAKQRYG  65
           +  ++A+F+I  M R+L V+R+G Y W+ RR   S +Q  R+  D  V++ FF+  Q  G
Sbjct  1   MAAQKAQFPIALMARLLEVSRAGFYQWFARRLAASDKQTARVRFDRMVRQLFFDYAQTHG  60

Query  66  APRLADELP-EFNI----KTIAASLRRQGLRAKASRKF  98
           +PRLA  L  ++ I    K +AASL+RQGL A ++R+F
Sbjct  61  SPRLAAALQRDYGIQVDKKRVAASLKRQGLEAISTRQF  98

3) SFV_3866 in NC_008258


> NC_016801_P1|22|G21|376291232|YP_005163479.1|Corynebacterium_diphtheriae_C7_(beta)|+|19846..20184|-|CDC7B_2038|transposase-like 
protein
Length=112

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 40/98 (41%), Positives = 62/98 (64%), Gaps = 5/98 (5%)

Query  6   IENHRAEFSIKAMCRVLRVARSGWYVWLRRRHQMSLRQQFRLTCDAAVHKAFFEAKQRYG  65
           +  ++A+F+I  M R+L V+R+G Y W+ RR   S +Q  R+  D  V++ FF+  Q  G
Sbjct  1   MAAQKAQFPIALMARLLEVSRAGFYQWFARRLAASDKQTARVRFDRMVRQLFFDYAQTHG  60

Query  66  APRLADELP-EFNI----KTIAASLRRQGLRAKASRKF  98
           +PRLA  L  ++ I    K +AASL+RQGL A ++R+F
Sbjct  61  SPRLAAALQRDYGIQVDKKRVAASLKRQGLEAISTRQF  98

4) M446_5596 in NC_010511


> NC_016801_P1|22|G21|376291232|YP_005163479.1|Corynebacterium_diphtheriae_C7_(beta)|+|19846..20184|-|CDC7B_2038|transposase-like 
protein
Length=112

 Score = 57.6 bits (199),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 40/96 (42%), Positives = 61/96 (64%), Gaps = 3/96 (3%)

Query  1   MSENQAHFPIAVMARVLGVSKAGDYAWVGRPLSARA-QADEVLL-RRIRTIHLGSRQTYG  58
           M+ ++A+FPIA+MAR+L VS+AG Y W +R L+A   Q+  V + R +R + ++  QT G
Sbjct  1   MAAQKAQFPIALMARLLEVSRAGFYQWFARRLAASDKQTARVRFDRMVRQLFFDYAQTHG  60

Query  59  SPRVQAEL-RDQGEAHSRKRIARLMREAGLVGACHR  93
           SPR+ A L RD G    +KR+A  ++  GL +   R
Sbjct  61  SPRLAAALQRDYGIQVDKKRVAASLKRQGLEAISTR  96

5) D781_1367 in NC_020064


> NC_016801_P1|22|G21|376291232|YP_005163479.1|Corynebacterium_diphtheriae_C7_(beta)|+|19846..20184|-|CDC7B_2038|transposase-like 
protein
Length=112

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 41/98 (42%), Positives = 60/98 (62%), Gaps = 5/98 (5%)

Query  6   IEKHQAEFSIKAMCRVLQVARSGWYAWrqrrhqinrrqqfrLVCDDAVRQTFAKAKQRYG  65
           +  ++A+F+I  M R+L+V+R+G Y W  RR   + +Q  R+  D  VRQ F    Q  G
Sbjct  1   MAAQKAQFPIALMARLLEVSRAGFYQWFARRLAASDKQTARVRFDRMVRQLFFDYAQTHG  60

Query  66  APRLADELP-EYNI----KTIAASLRRQGLRAKASRRF  98
           +PRLA  L  +Y I    K +AASL+RQGL A ++R+F
Sbjct  61  SPRLAAALQRDYGIQVDKKRVAASLKRQGLEAISTRQF  98

6) SFxv_5008 in NC_017319


> NC_016801_P1|22|G21|376291232|YP_005163479.1|Corynebacterium_diphtheriae_C7_(beta)|+|19846..20184|-|CDC7B_2038|transposase-like 
protein
Length=112

 Score = 40.8 bits (135),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 32/79 (41%), Positives = 47/79 (60%), Gaps = 2/79 (2%)

Query  2   RSGWYTWCQRRTGISPRQQFRQHCDSVVLAAAFTRSKQRYGAPRLTDELRAQ-GYHFNVK  60
           R+G Y W  RR + S +Q  R + D +V    F    Q  G+PRL+  L+ + G + + K
Sbjct  21  RAGFYQWFARRLAASDKQTARVRFDRMV-RQLFFDYAQTHGSPRLAAALQRDYGIQVDKK  79

Query  61  TVAASLRRQGLRAKASRKF  79
            VAASL+RQGL A ++R+F
Sbjct  80  RVAASLKRQGLEAISTRQF  98

7) CP0165 in NC_004851


> NC_016801_P1|22|G21|376291232|YP_005163479.1|Corynebacterium_diphtheriae_C7_(beta)|+|19846..20184|-|CDC7B_2038|transposase-like 
protein
Length=112

 Score = 40.8 bits (135),  Expect = 6e-05, Method: Compositional matrix adjust.
 Identities = 32/79 (41%), Positives = 47/79 (60%), Gaps = 2/79 (2%)

Query  2   RSGWYTWCQRRTGISPRQQFRQHCDSVVLAAAFTRSKQRYGAPRLTDELRAQ-GYHFNVK  60
           R+G Y W  RR + S +Q  R + D +V    F    Q  G+PRL+  L+ + G + + K
Sbjct  21  RAGFYQWFARRLAASDKQTARVRFDRMV-RQLFFDYAQTHGSPRLAAALQRDYGIQVDKK  79

Query  61  TVAASLRRQGLRAKASRKF  79
            VAASL+RQGL A ++R+F
Sbjct  80  RVAASLKRQGLEAISTRQF  98