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Homologs of hsdS2 gene of NC_016789_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hsdS2
( YP_005143739.1 )

type I restriction enzyme S subunit

NC_016789
(Corynebacterium diphtheriae PW8)

2e-86

100

2) hsdS3
( YP_005134648.1 )

type I restriction enzyme S subunit

NC_016785
(Corynebacterium diphtheriae CDCE 8392)

4e-74

3) CDBH8_2207
( YP_005161288.1 )

hypothetical protein

NC_016800
(Corynebacterium diphtheriae BH8)

5e-61

4) CD31A_2249
( YP_005158941.1 )

hypothetical protein

NC_016799
(Corynebacterium diphtheriae 31A)

1e-60

• Sequence Alignments

1) hsdS2 in NC_016789


> NC_016789_P2|22|G22|376255280|YP_005143739.1|Corynebacterium_diphtheriae_PW8|-|23338..23916|hsdS2|CDPW8_2191|type 
I restriction 
enzyme S subunit
Length=192

 Score =  312 bits (1168),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 192/192 (100%), Positives = 192/192 (100%), Gaps = 0/192 (0%)

Query  1    MGKWGGGGTPRKSNSDFWENGTIPWVTPKDVKSWILSDTQDHVTPMGISGSTANLYIGPA  60
            MGKWGGGGTPRKSNSDFWENGTIPWVTPKDVKSWILSDTQDHVTPMGISGSTANLYIGPA
Sbjct  1    MGKWGGGGTPRKSNSDFWENGTIPWVTPKDVKSWILSDTQDHVTPMGISGSTANLYIGPA  60

Query  61   IAFVVRSGILRRTLPATIVEGSFTANQDMKILHNISEDFDVRFIHHLVRPKEVGIRSSCA  120
            IAFVVRSGILRRTLPATIVEGSFTANQDMKILHNISEDFDVRFIHHLVRPKEVGIRSSCA
Sbjct  61   IAFVVRSGILRRTLPATIVEGSFTANQDMKILHNISEDFDVRFIHHLVRPKEVGIRSSCA  120

Query  121  KTGTTVESIDFQKLLEFELRLPLISEQKEIVRLVDSKLESLNQAETLVQKPLATLNALRD  180
            KTGTTVESIDFQKLLEFELRLPLISEQKEIVRLVDSKLESLNQAETLVQKPLATLNALRD
Sbjct  121  KTGTTVESIDFQKLLEFELRLPLISEQKEIVRLVDSKLESLNQAETLVQKPLATLNALRD  180

Query  181  SLVSAALSGRLT  192
            SLVSAALSGRLT
Sbjct  181  SLVSAALSGRLT  192

2) hsdS3 in NC_016785


> NC_016789_P2|22|G22|376255280|YP_005143739.1|Corynebacterium_diphtheriae_PW8|-|23338..23916|hsdS2|CDPW8_2191|type 
I restriction 
enzyme S subunit
Length=192

 Score =  270 bits (1011),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 166/167 (99%), Positives = 167/167 (100%), Gaps = 0/167 (0%)

Query  1    MTPKDVKSWILSDTQDHVTPMGISGSTANLYIGPAIAFVVRSGILRRTLPATIVEGSFTA  60
            +TPKDVKSWILSDTQDHVTPMGISGSTANLYIGPAIAFVVRSGILRRTLPATIVEGSFTA
Sbjct  26   VTPKDVKSWILSDTQDHVTPMGISGSTANLYIGPAIAFVVRSGILRRTLPATIVEGSFTA  85

Query  61   NQDMKILHNISEDFDVRFIHHLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLIS  120
            NQDMKILHNISEDFDVRFIHHLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLIS
Sbjct  86   NQDMKILHNISEDFDVRFIHHLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLIS  145

Query  121  EQKEIVRLVDSKLESLNQAETLVQKPLATLNALRDSLVSAALSGRLT  167
            EQKEIVRLVDSKLESLNQAETLVQKPLATLNALRDSLVSAALSGRLT
Sbjct  146  EQKEIVRLVDSKLESLNQAETLVQKPLATLNALRDSLVSAALSGRLT  192

3) CDBH8_2207 in NC_016800


> NC_016789_P2|22|G22|376255280|YP_005143739.1|Corynebacterium_diphtheriae_PW8|-|23338..23916|hsdS2|CDPW8_2191|type 
I restriction 
enzyme S subunit
Length=192

 Score =  227 bits (845),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 143/147 (98%), Positives = 146/147 (99%), Gaps = 0/147 (0%)

Query  1    MGISGSTANLYIGPAIAFVVWSGILRRTLPTTIVEGSFTANQDMKILHNISEDFDVRFID  60
            MGISGSTANLYIGPAIAFVV+SGILRRTLP+TIVEGSFTANQDMKILHNISEDFDVRFI+
Sbjct  46   MGISGSTANLYIGPAIAFVVRSGILRRTLPATIVEGSFTANQDMKILHNISEDFDVRFIH  105

Query  61   HLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLIFEQKEIVRLVDSKLESLNQAE  120
            HLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLI EQKEIVRLVDSKLESLNQAE
Sbjct  106  HLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLISEQKEIVRLVDSKLESLNQAE  165

Query  121  TLVQKPLATLNALRDSLVSAALSGRLT  147
            TLVQKPLATLNALRDSLVSAALSGRLT
Sbjct  166  TLVQKPLATLNALRDSLVSAALSGRLT  192

4) CD31A_2249 in NC_016799


> NC_016789_P2|22|G22|376255280|YP_005143739.1|Corynebacterium_diphtheriae_PW8|-|23338..23916|hsdS2|CDPW8_2191|type 
I restriction 
enzyme S subunit
Length=192

 Score =  225 bits (839),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 142/147 (97%), Positives = 145/147 (99%), Gaps = 0/147 (0%)

Query  1    MGISGSTANLYIGPAIAFVVWSGILRRTLPTIIVEGSFTANQDMKILHNISEDFDVRFID  60
            MGISGSTANLYIGPAIAFVV+SGILRRTLP+ IVEGSFTANQDMKILHNISEDFDVRFI+
Sbjct  46   MGISGSTANLYIGPAIAFVVRSGILRRTLPATIVEGSFTANQDMKILHNISEDFDVRFIH  105

Query  61   HLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLIFEQKEIVRLVDSKLESLNQAE  120
            HLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLI EQKEIVRLVDSKLESLNQAE
Sbjct  106  HLVRPKEVGIRSSCAKTGTTVESIDFQKLLEFELRLPLISEQKEIVRLVDSKLESLNQAE  165

Query  121  TLVQKPLATLNALRDSLVSAALSGRLT  147
            TLVQKPLATLNALRDSLVSAALSGRLT
Sbjct  166  TLVQKPLATLNALRDSLVSAALSGRLT  192