Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
VirB11 type IV secretion ATPase |
NC_011498 (Helicobacter pylori P12) |
6e-137 |
100 |
|
type II/IV secretion system family protein |
NC_022130 (Helicobacter pylori SouthAfrica20) |
6e-137 |
100 |
|
VirB11 type IV secretion ATPase |
NC_017361 (Helicobacter pylori SouthAfrica7) |
6e-137 |
100 |
|
VirB11 type IV secretion ATPase |
NC_019560 (Helicobacter pylori Aklavik117) |
2e-136 |
99 |
|
VirB11 type IV secretion ATPase |
NC_014555 (Helicobacter pylori PeCan4) |
2e-136 |
99 |
|
VIRB11 |
NC_017367 (Helicobacter pylori F57) |
3e-136 |
99 |
|
virB11-like type IV secretion system ATPase |
NC_011333 (Helicobacter pylori G27) |
3e-136 |
99 |
|
VirB11 type IV secretion ATPase |
NC_017371 (Helicobacter pylori Gambia94/24) |
3e-136 |
99 |
|
conjugal transfer protein TrbB |
NC_021218 (Helicobacter pylori UM066) |
5e-136 |
99 |
|
type IV secretion system protein VirB11 |
NC_014256 (Helicobacter pylori B8) |
1e-135 |
99 |
|
VirB11 |
NC_017358 (Helicobacter pylori Cuz20) |
1e-135 |
99 |
|
VirB11 type IV secretion ATPase |
NC_017740 (Helicobacter pylori Shi169) |
1e-135 |
99 |
|
VirB11 type IV secretion ATPase |
NC_017739 (Helicobacter pylori Shi417) |
1e-135 |
99 |
|
VirB11 type IV secretion ATPase |
NC_010698 (Helicobacter pylori Shi470) |
1e-135 |
99 |
|
VirB11 type IV secretion ATPase |
NC_017741 (Helicobacter pylori Shi112) |
5e-135 |
99 |
|
VirB11 type IV secretion ATPase |
NC_017376 (Helicobacter pylori Santal49) |
6e-134 |
99 |
|
type IV secretion system ATPase (virB11-like) |
NC_017919 (Helicobacter pylori XZ274) |
9e-134 |
99 |
|
type IV secretion system ATPase (virB11-like) |
NC_017926 (Helicobacter pylori XZ274) |
9e-134 |
99 |
|
VirB11 |
NC_017379 (Helicobacter pylori Puno135) |
8e-126 |
99 |
|
type IV secretion system ATPase (virB11-like) protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
2e-76 |
58 |
|
type IV secretion system protein VirB11 |
NC_017735 (Helicobacter cetorum MIT 99-5656) |
3e-75 |
58 |
|
type IV secretion system protein VirB11 |
NC_017737 (Helicobacter cetorum MIT 00-7128) |
8e-75 |
58 |
|
ATPase |
NC_020555 (Helicobacter cinaedi ATCC BAA-847) |
2e-59 |
50 |
|
type IV secretion system ATPase |
NC_017382 (Helicobacter pylori 51) |
7e-52 |
48 |
|
conjugal transfer protein TrbB |
NC_021217 (Helicobacter pylori UM037) |
7e-52 |
47 |
|
type IV secretion system protein VirB11 |
NC_014256 (Helicobacter pylori B8) |
8e-52 |
47 |
|
VirB11 type IV secretion ATPase |
NC_019560 (Helicobacter pylori Aklavik117) |
9e-52 |
48 |
|
VirB11 type IV secretion ATPase |
NC_017371 (Helicobacter pylori Gambia94/24) |
9e-52 |
47 |
|
VirB11 type IV secretion ATPase |
NC_017742 (Helicobacter pylori PeCan18) |
9e-52 |
47 |
|
VirB11 type IV secretion ATPase |
NC_017063 (Helicobacter pylori ELS37) |
1e-51 |
48 |
|
VirB11 type IV secretion ATPase |
NC_017741 (Helicobacter pylori Shi112) |
1e-51 |
48 |
|
conjugal transfer protein TrbB |
NC_021218 (Helicobacter pylori UM066) |
1e-51 |
48 |
|
VirB11 type IV secretion ATPase |
NC_017372 (Helicobacter pylori India7) |
1e-51 |
47 |
|
type IV secretion system ATPase |
NC_020508 (Helicobacter pylori OK113) |
2e-51 |
47 |
|
VirB11 type IV secretion ATPase |
NC_017739 (Helicobacter pylori Shi417) |
3e-51 |
48 |
|
VirB11 type IV secretion ATPase |
NC_017737 (Helicobacter cetorum MIT 00-7128) |
2e-50 |
46 |
|
VirB11 type IV secretion ATPase |
NC_011498 (Helicobacter pylori P12) |
2e-49 |
50 |
|
ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB11 |
NC_019674 (Helicobacter heilmannii ASB1.4) |
2e-47 |
47 |
|
ATPase |
NC_015674 (Helicobacter bizzozeronii CIII-1) |
4e-47 |
46 |
|
ATPase |
NC_015674 (Helicobacter bizzozeronii CIII-1) |
9e-47 |
43 |
|
conjugative transfer regulon protein |
NC_017284 (Campylobacter jejuni IA3902) |
6e-46 |
44 |
|
conjugative transfer regulon protein |
NC_008770 (Campylobacter jejuni 81-176) |
7e-46 |
43 |
|
virB11 protein |
NC_017735 (Helicobacter cetorum MIT 99-5656) |
4e-43 |
42 |
|
virB11 protein |
NC_017737 (Helicobacter cetorum MIT 00-7128) |
1e-42 |
41 |
|
hypothetical protein |
NC_005090 (Wolinella succinogenes DSM 1740) |
2e-42 |
46 |
|
putative type IV secretion system ATPase |
NC_017742 (Helicobacter pylori PeCan18) |
6e-42 |
41 |
|
virB11 protein |
NC_008229 (Helicobacter acinonychis Sheeba) |
1e-41 |
41 |
|
VirB11-like protein |
NC_014810 (Helicobacter felis ATCC 49179) |
1e-40 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_011498_P1' AND ph.id_pai_orf='22' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc