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Homologs of tnp gene of NC_007168_R4

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAR2236
( - )

NC_002952
(Staphylococcus aureus MRSA252)

0.0

81.7

2) SAUSA300_1727
( - )

NC_007793
(Staphylococcus aureus FPR3757)

e-197

3) SATW20_17750
( - )

NC_017331
(Staphylococcus aureus TW20)

e-197

4) SAOUHSC_01905
( - )

NC_007795
(Staphylococcus aureus NCTC 8325)

e-197

81.9

5) SAEMRSA15_23280
( - )

NC_017763
(Staphylococcus aureus HO 5096 0412)

e-197

80.5

6) SAOUHSC_01805
( - )

NC_007795
(Staphylococcus aureus NCTC 8325)

e-194

7) SAOUHSC_02437
( - )

NC_007795
(Staphylococcus aureus NCTC 8325)

e-121

83.8

• Sequence Alignments

1) SAR2236 in NC_002952


>NC_007168_R4|22|G22|70727618|YP_254534.1|Staphylococcus_haemolyticus_JCSC1435|-|13661..14995|tnp|SH2619|IS1272 
          Length = 1335

 Score = 1214 bits (3133), Expect = 0.0
 Identities = 782/972 (80%)
 Strand = Plus / Plus

Query: 1   atgtataaaaattataacatgacccaacttacactaccaatagaaacttctgttagaatt 60
           ||||||||||||||||||||||| |||||||| |||||||| |||||||| |||   || 
Sbjct: 1   atgtataaaaattataacatgactcaacttactctaccaatggaaacttcagttcttatc 60

Query: 61  cctcaaaatgatatttcacgatatgttaatgaaattgttgaaacgatacctgatagcgaa 120
            |   |||||||||||||||| |||| ||||| ||||||||||| || ||||| |  |||
Sbjct: 61  gccacaaatgatatttcacgacatgtaaatgatattgttgaaacaattcctgacaatgaa 120

Query: 121 ttcgatgaattcagacatcatcgtggcgcaacatcctatcatccaaaaatgatgttaaaa 180
           ||||| |||||||||||||| ||||| ||||| || || ||||| |||||||||||||||
Sbjct: 121 ttcgacgaattcagacatcaccgtggtgcaacttcgtaccatcctaaaatgatgttaaaa 180

Query: 181 attatcttatatgcatacactcaatctgtattttctggtcgtagaatagagaaattactt 240
            | ||  ||||||| ||||| ||||||||||| || ||||||| |||||| ||| |  ||
Sbjct: 181 gtgattctatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgatt 240

Query: 241 catgacagtattcgattgatgtggttagctcaaaatcaaacaccttcttataaaactatt 300
            |||| || || ||| |||||||| || | |||||||||| ||||||||||||||| |||
Sbjct: 241 aatgatagcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaatt 300

Query: 301 aatcgttttagagtaaatcctaatactgatgcattaattgaatctttatttattcagttt 360
           ||||| |||||||||||||| ||    ||||| ||| | ||||||||||||||||| |||
Sbjct: 301 aatcgatttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattt 360

Query: 361 catagtcaatgtttaaagcaaaatcttattgatgataattcaatttttattgatggtaca 420
            | ||||| ||| |||| ||||||||||| ||||||||  | ||||||||||||||||||
Sbjct: 361 tacagtcagtgtgtaaaacaaaatcttatagatgataaagctatttttattgatggtaca 420

Query: 421 aaagtagaagctaatgccaataggtatacatttgtgtggaagaaaagtattcaaaatcac 480
           ||| | ||||| ||||||||| | ||||||||||| ||||| || ||||||||||| || 
Sbjct: 421 aaaattgaagcaaatgccaatcgatatacatttgtatggaaaaagagtattcaaaaccat 480

Query: 481 gaatcgaaattgaacgaaaattcaaaagcattatatcgtgacttagttgaagaaaaaata 540
           ||||| ||  |||| ||  |||| |||||  | || | ||| || ||     | ||||| 
Sbjct: 481 gaatcaaagatgaatgaggattctaaagccctctaccatgaattggtaaccaataaaatc 540

Query: 541 ataccagagataaaagaagatggagatagcgatttaacaatagaagaaatagatttaatt 600
           ||||| || || |||||||||   ||||  || ||||||| ||||||||||||||| |||
Sbjct: 541 ataccggaaattaaagaagatcatgataatgaattaacaaaagaagaaatagatttgatt 600

Query: 601 ggtagtcatttagataaagaaatcgaagatttaaatcattctattcagaacgaagattgt 660
           |||||||| |||||||||||||||||||||||||| ||   |||  | || ||| | |||
Sbjct: 601 ggtagtcacttagataaagaaatcgaagatttaaaccaacatatcaacaatgaaaaatgt 660

Query: 661 actcaaattagaaaacagacccgtaaaaaaagaactgagattaagaagttcaaaaagaaa 720
           ||| |||  |||||||| |  |||   ||||||||| | || || || | ||||||| ||
Sbjct: 661 actaaaacaagaaaacaaatacgtctcaaaagaactaaaatcaaaaaatacaaaaagcaa 720

Query: 721 tttgatgattattccgaaagaaaaagtaaatatgaagaacaaaaatcgattcttaaagat 780
            |  |||||||||  ||  ||||   |  ||| |||   |||||||| ||| | || || 
Sbjct: 721 atcaatgattattttgagcgaaagtatcgatacgaatttcaaaaatctattttaaaggac 780

Query: 781 agaaatagcttttctaaaactgatcatgatgcaacttttatgagaatgaaggaagaccat 840
           |||||||| | |||||| || ||||||||||| || |||||||| ||||| ||||| || 
Sbjct: 781 agaaatagttattctaagacagatcatgatgcgacctttatgaggatgaaagaagatcac 840

Query: 841 atgaaaaatggccaacttaagccaggatacaatttacaaatagcgacaaattctcaattt 900
           ||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 841 atgaaaaatggacaacttaagccagggtataatttacaaatagcgacaaattcccaattt 900

Query: 901 gttttatcctatgacctatttcaaaacccgacagatactagaactttaattccattttta 960
           |||||||| ||| |  | | |||||| || || |||||||||||  | ||||||||||||
Sbjct: 901 gttttatcttataatgtgtatcaaaatccaacggatactagaacgatgattccattttta 960

Query: 961 acaatgattcaa 972
           |     ||||||
Sbjct: 961 a-----attcaa 967


 Score = 327 bits (844), Expect = 1e-89
 Identities = 203/240 (85%)
 Strand = Plus / Plus

Query: 976  accttcggttatttaccggagtatattgttagctgatgcaggttatggtagtgagcaaaa 1035
            |||| |||| ||||||| || ||||||| |||||||||||||||||||||||||   |||
Sbjct: 976  acctacggtcatttacctgaatatattg-tagctgatgcaggttatggtagtgaatcaaa 1034

Query: 1036 ctatatggctattatagatgattttaataaaacgccacttattacgtatggtatgtttat 1095
             |||| ||| ||||||||||| ||||||  ||||| ||| || || ||||| ||||||||
Sbjct: 1035 ttataaggcaattatagatgactttaatcgaacgctactcataacatatggaatgtttat 1094

Query: 1096 taaagataaaacgagaaagtttaaaagtgacatttttaacactcaaaactggaaatatga 1155
             ||||||||||| | ||| | |||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 1095 aaaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatga 1154

Query: 1156 cgaacttaatgatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgc 1215
            |||| ||||||| ||||| || ||||| ||||| ||| |  |||||||||||||||||||
Sbjct: 1155 cgaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgc 1214

2) SATW20_17750 in NC_017331


>NC_007168_R4|22|G22|70727618|YP_254534.1|Staphylococcus_haemolyticus_JCSC1435|-|13661..14995|tnp|SH2619|IS1272 
          Length = 1335

 Score = 685 bits (1768), Expect = e-197
 Identities = 453/571 (79%)
 Strand = Plus / Plus

Query: 235 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 294
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 403 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 462

Query: 295 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 354
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 463 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 522

Query: 355 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 414
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 523 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 582

Query: 415 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 474
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 583 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 642

Query: 475 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaagaactgagatt 534
           ||  | || ||| | ||| || |||  |||||||| |  |||   ||||||||| | || 
Sbjct: 643 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 702

Query: 535 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 594
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 703 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 762

Query: 595 aaatcgattcttaaag-atagaaatagtttttctaaaactgatcatgatgcaacttttat 653
           ||||| ||| |||||| | |||||||||| |||||| || ||||||||||| || |||||
Sbjct: 763 aaatctatt-ttaaaggacagaaatagttattctaagacagatcatgatgcgacctttat 821

Query: 654 gagaatgaaggaagaccatatgaaaaatggccaacttaagccaggatacaatttacaaat 713
           ||| ||||| ||||| || ||||||||||| |||||||||||||| || |||||||||||
Sbjct: 822 gaggatgaaagaagatcacatgaaaaatggacaacttaagccagggtataatttacaaat 881

Query: 714 agcgacaaattctcaatttgttttatcctatgacctatttcaaaacccgacagatactag 773
           |||||||||||| |||||||||||||| ||| |  | | |||||| || || ||||||||
Sbjct: 882 agcgacaaattcccaatttgttttatcttataatgtgtatcaaaatccaacggatactag 941

Query: 774 aactttaattccatttttaacaatgattcaa 804
           |||  | |||||||||||||     ||||||
Sbjct: 942 aacgatgattccatttttaa-----attcaa 967


 Score = 405 bits (1046), Expect = e-113
 Identities = 242/284 (85%)
 Strand = Plus / Plus

Query: 820  ttgtagctgatgcaggttatggtagtgagcaaaactatatggccattatagatgatttta 879
            ||||||||||||||||||||||||||||   ||| |||| ||| ||||||||||| ||||
Sbjct: 1001 ttgtagctgatgcaggttatggtagtgaatcaaattataaggcaattatagatgacttta 1060

Query: 880  ataaaacgccacttattacgtatggcatgtttattaaagataaaactagaaagtttaaaa 939
            ||  ||||| ||| || || ||||| |||||||| ||||||||||||| ||| | |||||
Sbjct: 1061 atcgaacgctactcataacatatggaatgtttataaaagataaaactaaaaaatataaaa 1120

Query: 940  gtgacattttcaacactcaaaattggaaatatgacgaacttaatgatgaatttatatgtc 999
            ||||||| || || |||||||||||||| ||||||||| ||||||| ||||| || ||||
Sbjct: 1121 gtgacatctttaatactcaaaattggaactatgacgaaattaatgacgaattcatttgtc 1180

Query: 1000 ctaataacaaaagaataggttttaaaagatatgcataccgtaatgatagatatggtttta 1059
            | ||||| ||| |  ||||||||||||||||||| || ||| ||||||  ||||||| ||
Sbjct: 1181 cgaataataaacggctaggttttaaaagatatgcctatcgtcatgataagtatggttata 1240

Query: 1060 aacgagacttcaaactatatgaatgcgatgactgttcagcatgt 1103
            | |||||||||||| |||||||||| ||||| ||||||| ||||
Sbjct: 1241 agcgagacttcaaattatatgaatgtgatgattgttcagaatgt 1284


 Score = 283 bits (730), Expect = 2e-76
 Identities = 186/230 (81%)
 Strand = Plus / Plus

Query: 1   atgatgttaaaaatcatcttatatgcatatactcaatctgtattttctggtcgaagaata 60
           |||||||||||| | ||  ||||||| || || ||||||||||| || ||||| | ||||
Sbjct: 169 atgatgttaaaagtgattctatatgcctacacacaatctgtattctcaggtcgtaaaata 228

Query: 61  gagaaattacttcatgacagtattcgaatgatgtggttagctcaaaatcaaacaccttct 120
           || ||| |  || |||| || || |||||||||||| || | |||||||||| |||||||
Sbjct: 229 gaaaaaatgattaatgatagcatccgaatgatgtggctatcacaaaatcaaaaaccttct 288

Query: 121 tataaaactattaatcgttttagagtgaatcctaatactgatgcgttaattgaatcttta 180
           |||||||| |||||||| |||||||| ||||| ||    ||||| ||| | |||||||||
Sbjct: 289 tataaaacaattaatcgatttagagtaaatccaaaagtagatgctttattagaatcttta 348

Query: 181 tttattcagttccatagtcaatgtttaaagcaaaatcttat---tgataa 227
           |||||||| ||  | ||||| ||| |||| |||||||||||   ||||||
Sbjct: 349 tttattcaattttacagtcagtgtgtaaaacaaaatcttatagatgataa 398

3) SAUSA300_1727 in NC_007793


>NC_007168_R4|22|G22|70727618|YP_254534.1|Staphylococcus_haemolyticus_JCSC1435|-|13661..14995|tnp|SH2619|IS1272 
          Length = 1335

 Score = 685 bits (1768), Expect = e-197
 Identities = 453/571 (79%)
 Strand = Plus / Plus

Query: 235 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 294
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 403 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 462

Query: 295 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 354
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 463 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 522

Query: 355 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 414
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 523 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 582

Query: 415 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 474
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 583 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 642

Query: 475 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaagaactgagatt 534
           ||  | || ||| | ||| || |||  |||||||| |  |||   ||||||||| | || 
Sbjct: 643 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 702

Query: 535 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 594
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 703 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 762

Query: 595 aaatcgattcttaaag-atagaaatagtttttctaaaactgatcatgatgcaacttttat 653
           ||||| ||| |||||| | |||||||||| |||||| || ||||||||||| || |||||
Sbjct: 763 aaatctatt-ttaaaggacagaaatagttattctaagacagatcatgatgcgacctttat 821

Query: 654 gagaatgaaggaagaccatatgaaaaatggccaacttaagccaggatacaatttacaaat 713
           ||| ||||| ||||| || ||||||||||| |||||||||||||| || |||||||||||
Sbjct: 822 gaggatgaaagaagatcacatgaaaaatggacaacttaagccagggtataatttacaaat 881

Query: 714 agcgacaaattctcaatttgttttatcctatgacctatttcaaaacccgacagatactag 773
           |||||||||||| |||||||||||||| ||| |  | | |||||| || || ||||||||
Sbjct: 882 agcgacaaattcccaatttgttttatcttataatgtgtatcaaaatccaacggatactag 941

Query: 774 aactttaattccatttttaacaatgattcaa 804
           |||  | |||||||||||||     ||||||
Sbjct: 942 aacgatgattccatttttaa-----attcaa 967


 Score = 405 bits (1046), Expect = e-113
 Identities = 242/284 (85%)
 Strand = Plus / Plus

Query: 820  ttgtagctgatgcaggttatggtagtgagcaaaactatatggccattatagatgatttta 879
            ||||||||||||||||||||||||||||   ||| |||| ||| ||||||||||| ||||
Sbjct: 1001 ttgtagctgatgcaggttatggtagtgaatcaaattataaggcaattatagatgacttta 1060

Query: 880  ataaaacgccacttattacgtatggcatgtttattaaagataaaactagaaagtttaaaa 939
            ||  ||||| ||| || || ||||| |||||||| ||||||||||||| ||| | |||||
Sbjct: 1061 atcgaacgctactcataacatatggaatgtttataaaagataaaactaaaaaatataaaa 1120

Query: 940  gtgacattttcaacactcaaaattggaaatatgacgaacttaatgatgaatttatatgtc 999
            ||||||| || || |||||||||||||| ||||||||| ||||||| ||||| || ||||
Sbjct: 1121 gtgacatctttaatactcaaaattggaactatgacgaaattaatgacgaattcatttgtc 1180

Query: 1000 ctaataacaaaagaataggttttaaaagatatgcataccgtaatgatagatatggtttta 1059
            | ||||| ||| |  ||||||||||||||||||| || ||| ||||||  ||||||| ||
Sbjct: 1181 cgaataataaacggctaggttttaaaagatatgcctatcgtcatgataagtatggttata 1240

Query: 1060 aacgagacttcaaactatatgaatgcgatgactgttcagcatgt 1103
            | |||||||||||| |||||||||| ||||| ||||||| ||||
Sbjct: 1241 agcgagacttcaaattatatgaatgtgatgattgttcagaatgt 1284


 Score = 283 bits (730), Expect = 2e-76
 Identities = 186/230 (81%)
 Strand = Plus / Plus

Query: 1   atgatgttaaaaatcatcttatatgcatatactcaatctgtattttctggtcgaagaata 60
           |||||||||||| | ||  ||||||| || || ||||||||||| || ||||| | ||||
Sbjct: 169 atgatgttaaaagtgattctatatgcctacacacaatctgtattctcaggtcgtaaaata 228

Query: 61  gagaaattacttcatgacagtattcgaatgatgtggttagctcaaaatcaaacaccttct 120
           || ||| |  || |||| || || |||||||||||| || | |||||||||| |||||||
Sbjct: 229 gaaaaaatgattaatgatagcatccgaatgatgtggctatcacaaaatcaaaaaccttct 288

Query: 121 tataaaactattaatcgttttagagtgaatcctaatactgatgcgttaattgaatcttta 180
           |||||||| |||||||| |||||||| ||||| ||    ||||| ||| | |||||||||
Sbjct: 289 tataaaacaattaatcgatttagagtaaatccaaaagtagatgctttattagaatcttta 348

Query: 181 tttattcagttccatagtcaatgtttaaagcaaaatcttat---tgataa 227
           |||||||| ||  | ||||| ||| |||| |||||||||||   ||||||
Sbjct: 349 tttattcaattttacagtcagtgtgtaaaacaaaatcttatagatgataa 398

4) SAOUHSC_01905 in NC_007795


>NC_007168_R4|22|G22|70727618|YP_254534.1|Staphylococcus_haemolyticus_JCSC1435|-|13661..14995|tnp|SH2619|IS1272 
          Length = 1335

 Score = 685 bits (1768), Expect = e-197
 Identities = 453/571 (79%)
 Strand = Plus / Plus

Query: 235 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 294
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 403 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 462

Query: 295 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 354
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 463 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 522

Query: 355 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 414
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 523 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 582

Query: 415 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 474
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 583 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 642

Query: 475 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaagaactgagatt 534
           ||  | || ||| | ||| || |||  |||||||| |  |||   ||||||||| | || 
Sbjct: 643 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 702

Query: 535 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 594
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 703 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 762

Query: 595 aaatcgattcttaaag-atagaaatagtttttctaaaactgatcatgatgcaacttttat 653
           ||||| ||| |||||| | |||||||||| |||||| || ||||||||||| || |||||
Sbjct: 763 aaatctatt-ttaaaggacagaaatagttattctaagacagatcatgatgcgacctttat 821

Query: 654 gagaatgaaggaagaccatatgaaaaatggccaacttaagccaggatacaatttacaaat 713
           ||| ||||| ||||| || ||||||||||| |||||||||||||| || |||||||||||
Sbjct: 822 gaggatgaaagaagatcacatgaaaaatggacaacttaagccagggtataatttacaaat 881

Query: 714 agcgacaaattctcaatttgttttatcctatgacctatttcaaaacccgacagatactag 773
           |||||||||||| |||||||||||||| ||| |  | | |||||| || || ||||||||
Sbjct: 882 agcgacaaattcccaatttgttttatcttataatgtgtatcaaaatccaacggatactag 941

Query: 774 aactttaattccatttttaacaatgattcaa 804
           |||  | |||||||||||||     ||||||
Sbjct: 942 aacgatgattccatttttaa-----attcaa 967


 Score = 403 bits (1039), Expect = e-112
 Identities = 241/284 (85%)
 Strand = Plus / Plus

Query: 820  ttgtagctgatgcaggttatggtagtgagcaaaactatatggccattatagatgatttta 879
            ||||||||||||||||||||||||||||   ||| |||| ||| ||||||||||| ||||
Sbjct: 1001 ttgtagctgatgcaggttatggtagtgaatcaaattataaggcaattatagatgacttta 1060

Query: 880  ataaaacgccacttattacgtatggcatgtttattaaagataaaactagaaagtttaaaa 939
            ||  ||||| ||| || || ||||| |||||||| ||||||||||||| ||| | |||||
Sbjct: 1061 atcgaacgctactcataacatatggaatgtttataaaagataaaactaaaaaatataaaa 1120

Query: 940  gtgacattttcgacactcaaaattggaaatatgacgaacttaatgatgaatttatatgtc 999
            ||||||| ||  | |||||||||||||| ||||||||| ||||||| ||||| || ||||
Sbjct: 1121 gtgacatctttaatactcaaaattggaactatgacgaaattaatgacgaattcatttgtc 1180

Query: 1000 ctaataacaaaagaataggttttaaaagatatgcataccgtaatgatagatatggtttta 1059
            | ||||| ||| |  ||||||||||||||||||| || ||| ||||||  ||||||| ||
Sbjct: 1181 cgaataataaacggctaggttttaaaagatatgcctatcgtcatgataagtatggttata 1240

Query: 1060 aacgagacttcaaactatatgaatgcgatgactgttcagcatgt 1103
            | |||||||||||| |||||||||| ||||| ||||||| ||||
Sbjct: 1241 agcgagacttcaaattatatgaatgtgatgattgttcagaatgt 1284


 Score = 283 bits (730), Expect = 2e-76
 Identities = 186/230 (81%)
 Strand = Plus / Plus

Query: 1   atgatgttaaaaatcatcttatatgcatatactcaatctgtattttctggtcgaagaata 60
           |||||||||||| | ||  ||||||| || || ||||||||||| || ||||| | ||||
Sbjct: 169 atgatgttaaaagtgattctatatgcctacacacaatctgtattctcaggtcgtaaaata 228

Query: 61  gagaaattacttcatgacagtattcgaatgatgtggttagctcaaaatcaaacaccttct 120
           || ||| |  || |||| || || |||||||||||| || | |||||||||| |||||||
Sbjct: 229 gaaaaaatgattaatgatagcatccgaatgatgtggctatcacaaaatcaaaaaccttct 288

Query: 121 tataaaactattaatcgttttagagtgaatcctaatactgatgcgttaattgaatcttta 180
           |||||||| |||||||| |||||||| ||||| ||    ||||| ||| | |||||||||
Sbjct: 289 tataaaacaattaatcgatttagagtaaatccaaaagtagatgctttattagaatcttta 348

Query: 181 tttattcagttccatagtcaatgtttaaagcaaaatcttat---tgataa 227
           |||||||| ||  | ||||| ||| |||| |||||||||||   ||||||
Sbjct: 349 tttattcaattttacagtcagtgtgtaaaacaaaatcttatagatgataa 398

5) SAEMRSA15_23280 in NC_017763


>NC_007168_R4|22|G22|70727618|YP_254534.1|Staphylococcus_haemolyticus_JCSC1435|-|13661..14995|tnp|SH2619|IS1272 
          Length = 1335

 Score = 685 bits (1768), Expect = e-197
 Identities = 447/570 (78%)
 Strand = Plus / Plus

Query: 403 attttcattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 462
           ||||| ||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 403 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 462

Query: 463 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 522
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 463 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 522

Query: 523 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 582
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 523 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 582

Query: 583 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 642
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 583 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 642

Query: 643 attgaaaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaagaactgagatt 702
           ||  | || ||| | ||| || |||  |||||||| |  |||   ||||||||| | || 
Sbjct: 643 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 702

Query: 703 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaagtaaatatgaagaacaa 762
           || || | ||||||| || |  |||||||||  ||  ||||   |  ||| |||   |||
Sbjct: 703 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 762

Query: 763 aaatcgattcttaaagatagaaatagcttttctaaaactgatcatgatgcaacttttatg 822
           ||||| ||| | || || |||||||| | |||||| || ||||||||||| || ||||||
Sbjct: 763 aaatctattttaaaggacagaaatagttattctaagacagatcatgatgcgacctttatg 822

Query: 823 agaatgaaggaagaccatatgaaaaacggccaacttaagccaggatacaatttacaaata 882
           || ||||| ||||| || |||||||| || |||||||||||||| || ||||||||||||
Sbjct: 823 aggatgaaagaagatcacatgaaaaatggacaacttaagccagggtataatttacaaata 882

Query: 883 gcgacaaattctcaatttgttttatcctatgacctatttcaaaacccgacagatactaga 942
           ||||||||||| |||||||||||||| ||| |  | | |||||| || || |||||||||
Sbjct: 883 gcgacaaattcccaatttgttttatcttataatgtgtatcaaaatccaacggatactaga 942

Query: 943 actttaattccatttttaacaatgattcaa 972
           ||  | |||||||||||||     ||||||
Sbjct: 943 acgatgattccatttttaa-----attcaa 967


 Score = 513 bits (1323), Expect = e-145
 Identities = 326/398 (82%)
 Strand = Plus / Plus

Query: 1   atgtataaaaattataacatgacccaatttacactaccaatagaaacttctgttagaatc 60
           ||||||||||||||||||||||| ||| |||| |||||||| |||||||| |||   |||
Sbjct: 1   atgtataaaaattataacatgactcaacttactctaccaatggaaacttcagttcttatc 60

Query: 61  cctcaaaatgatatttcgcgatatgttaatgaaattgttgaaacgatacctgatagcgaa 120
            |   |||||||||||| ||| |||| ||||| ||||||||||| || ||||| |  |||
Sbjct: 61  gccacaaatgatatttcacgacatgtaaatgatattgttgaaacaattcctgacaatgaa 120

Query: 121 ttcgatgaattcagacatcatcgtggcgcaacatcctatcatccaaaaatgatgttaaaa 180
           ||||| |||||||||||||| ||||| ||||| || || ||||| |||||||||||||||
Sbjct: 121 ttcgacgaattcagacatcaccgtggtgcaacttcgtaccatcctaaaatgatgttaaaa 180

Query: 181 atcatcttatatgcatatactcaatctgtattttctggtcgtagaatagagaaattactt 240
            | ||  ||||||| || || ||||||||||| || ||||||| |||||| ||| |  ||
Sbjct: 181 gtgattctatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgatt 240

Query: 241 catgacagtattcgaatgatgtggttagctcaagatcaaacaccttcttataaaactatt 300
            |||| || || |||||||||||| || | ||| |||||| ||||||||||||||| |||
Sbjct: 241 aatgatagcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaatt 300

Query: 301 aatcgttttagagtgaatcctaatactgatgcgttaatagaatctttatttatttagttc 360
           ||||| |||||||| ||||| ||    ||||| ||| ||||||||||||||||| | || 
Sbjct: 301 aatcgatttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattt 360

Query: 361 catagtcaatgtttaaagcaaaatcttat---tgataa 395
            | ||||| ||| |||| |||||||||||   ||||||
Sbjct: 361 tacagtcagtgtgtaaaacaaaatcttatagatgataa 398

6) SAOUHSC_01805 in NC_007795


>NC_007168_R4|22|G22|70727618|YP_254534.1|Staphylococcus_haemolyticus_JCSC1435|-|13661..14995|tnp|SH2619|IS1272 
          Length = 1335

 Score = 675 bits (1741), Expect = e-194
 Identities = 402/477 (84%)
 Strand = Plus / Plus

Query: 807  gatcatgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaag 866
            ||||||||||| || |||||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 802  gatcatgatgcgacctttatgaggatgaaagaagatcacatgaaaaatggacaacttaag 861

Query: 867  ccaggatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctattt 926
            ||||| || ||||||||||||||||||||||| |||||||||||||| ||| |  | | |
Sbjct: 862  ccagggtataatttacaaatagcgacaaattcccaatttgttttatcttataatgtgtat 921

Query: 927  caaaacccaacagatactagaacattaatcccatttttaacaatgattcaaaataccttc 986
            ||||| ||||| |||||||||||  | || ||||||||||     |||||| | |||| |
Sbjct: 922  caaaatccaacggatactagaacgatgattccatttttaaattcaattcaagagacctac 981

Query: 987  ggttatttaccagagtatattgtagctgatgcaggttatggtagtgagcaaaactatatg 1046
            ||| ||||||| || ||||||||||||||||||||||||||||||||   ||| |||| |
Sbjct: 982  ggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaattataag 1041

Query: 1047 gctattatagatgattttaataaaacgccacttattacgtatggcatgtttattaaagat 1106
            || ||||||||||| ||||||  ||||| ||| || || ||||| |||||||| ||||||
Sbjct: 1042 gcaattatagatgactttaatcgaacgctactcataacatatggaatgtttataaaagat 1101

Query: 1107 aaaactagaaagtttaaaagtggcattttcaacactcaaaattggaaatatgacgaactt 1166
            ||||||| ||| | |||||||| ||| || || |||||||||||||| ||||||||| ||
Sbjct: 1102 aaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgacgaaatt 1161

Query: 1167 aataatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgcataccgt 1226
            ||| | ||||| || ||||| ||||| ||| |  ||||||||||||||||||| || |||
Sbjct: 1162 aatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcctatcgt 1221

Query: 1227 aatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgttca 1283
             ||||||  ||||||| ||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 1222 catgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgttca 1278


 Score = 507 bits (1308), Expect = e-144
 Identities = 325/398 (82%)
 Strand = Plus / Plus

Query: 1   atgtataaaatttataacatgacccaacttacactaccaatagaaacctctgttagaatt 60
           |||||||||| |||||||||||| |||||||| |||||||| ||||| || |||   || 
Sbjct: 1   atgtataaaaattataacatgactcaacttactctaccaatggaaacttcagttcttatc 60

Query: 61  cctcaaaatgatatttcgcgatatgttaatgaaattgttgaaacgatacctgatagcgaa 120
            |   |||||||||||| ||| |||| ||||| ||||||||||| || ||||| |  |||
Sbjct: 61  gccacaaatgatatttcacgacatgtaaatgatattgttgaaacaattcctgacaatgaa 120

Query: 121 ttcgatgaattcagacatcatcgtggcgcaacatcctatcatccaaaaatgatgttaaaa 180
           ||||| |||||||||||||| ||||| ||||| || || ||||| |||||||||||||||
Sbjct: 121 ttcgacgaattcagacatcaccgtggtgcaacttcgtaccatcctaaaatgatgttaaaa 180

Query: 181 atcatcttatatgcatatactcaatctgtattttctggtcgtagaatagaaaaattactt 240
            | ||  ||||||| || || ||||||||||| || ||||||| |||||||||| |  ||
Sbjct: 181 gtgattctatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgatt 240

Query: 241 catgacagtattcgaatgatgtggttagctcaagatcaaacaccttcttataaaactatt 300
            |||| || || |||||||||||| || | ||| |||||| ||||||||||||||| |||
Sbjct: 241 aatgatagcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaatt 300

Query: 301 aatcgttttagagtgaatcctaatactgatgcgttaattgaatctttatttattcagttc 360
           ||||| |||||||| ||||| ||    ||||| ||| | ||||||||||||||||| || 
Sbjct: 301 aatcgatttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattt 360

Query: 361 catagtcaatgtttaaagcaaaatcttat---tgataa 395
            | ||||| ||| |||| |||||||||||   ||||||
Sbjct: 361 tacagtcagtgtgtaaaacaaaatcttatagatgataa 398


 Score = 303 bits (782), Expect = 2e-82
 Identities = 190/233 (82%)
 Strand = Plus / Plus

Query: 403 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 462
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 403 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 462

Query: 463 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgac 522
           || ||||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| 
Sbjct: 463 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 522

Query: 523 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 582
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 523 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 582

Query: 583 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaa 635
           |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 583 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaa 635

7) SAOUHSC_02437 in NC_007795


>NC_007168_R4|22|G22|70727618|YP_254534.1|Staphylococcus_haemolyticus_JCSC1435|-|13661..14995|tnp|SH2619|IS1272 
          Length = 1335

 Score = 432 bits (1115), Expect = e-121
 Identities = 258/303 (85%)
 Strand = Plus / Plus

Query: 954  accttcggttatttaccggagtatattgtagctgatgcaggttatggtagtgagcaaaac 1013
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 976  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 1035

Query: 1014 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1073
            |||| ||| ||||||||||| ||||||  ||||| ||| || || ||||| |||||||| 
Sbjct: 1036 tataaggcaattatagatgactttaatcgaacgctactcataacatatggaatgtttata 1095

Query: 1074 aaagataaaactagaaagtttaaaagtgacattttcaacacttaaaattggaaatatgac 1133
            ||||||||||||| ||| | |||||||||||| || || ||| |||||||||| ||||||
Sbjct: 1096 aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 1155

Query: 1134 gaacttaatgatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1193
            ||| ||||||| ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 1156 gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1215

Query: 1194 taccgtaatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgt 1253
            || ||| ||||||  ||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 1216 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1275

Query: 1254 tca 1256
            |||
Sbjct: 1276 tca 1278


 Score = 367 bits (948), Expect = e-102
 Identities = 237/290 (82%)
 Strand = Plus / Plus

Query: 64  caaattgatatttcgcgatatgttaatgaaattgttgaaacgatacctgatagcgaattc 123
           |||| ||||||||| ||| |||| ||||| ||||||||||| || ||||| |  ||||||
Sbjct: 65  caaa-tgatatttcacgacatgtaaatgatattgttgaaacaattcctgacaatgaattc 123

Query: 124 gataaattcagacatcatcgtggcgcaacatcctatcatccaaaaatgatgttaaaaatc 183
           ||  ||||||||||||| ||||| ||||| || || ||||| ||||||||||||||| | 
Sbjct: 124 gacgaattcagacatcaccgtggtgcaacttcgtaccatcctaaaatgatgttaaaagtg 183

Query: 184 accttatatgcatatactcaatctgtattttctggtcgtagaatagagaaattacttcat 243
           |   ||||||| || || ||||||||||| || ||||||| |||||| ||| |  || ||
Sbjct: 184 attctatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgattaat 243

Query: 244 gacagtattcgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaat 303
           || || || |||||||||||| || | |||||||||| ||||||||||||||| ||||||
Sbjct: 244 gatagcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaat 303

Query: 304 cgtattagagtgaatcctaatactgatgcgttaattgaatctttatttat 353
           ||  ||||||| ||||| ||    ||||| ||| | ||||||||||||||
Sbjct: 304 cgatttagagtaaatccaaaagtagatgctttattagaatctttatttat 353


 Score = 291 bits (750), Expect = 1e-78
 Identities = 184/229 (80%)
 Strand = Plus / Plus

Query: 386 ttattgatggtacaaaagtagaagctaatgccaataggtatacatttgtgtggaagaaaa 445
           ||||||||||||||||| | ||||| ||||||||| | ||||||||||| ||||| || |
Sbjct: 407 ttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaaaaga 466

Query: 446 gtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgacttag 505
           |||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| || |
Sbjct: 467 gtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaattgg 526

Query: 506 ttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaatagaag 565
           |     | ||||| ||||| || || |||||||||   ||||  || ||||||| |||||
Sbjct: 527 taaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaagaag 586

Query: 566 aaatagatttaattggtagtcatttagataaagaaatcgaaggtttaaa 614
           |||||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 587 aaatagatttgattggtagtcacttagataaagaaatcgaagatttaaa 635


 Score = 245 bits (631), Expect = 7e-65
 Identities = 145/171 (85%)
 Strand = Plus / Plus

Query: 780 gatcatgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaag 839
           ||||||||||| || |||||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 802 gatcatgatgcgacctttatgaggatgaaagaagatcacatgaaaaatggacaacttaag 861

Query: 840 ccaggatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctattt 899
           ||||| || ||||||||||||||||||||||| |||||||||||||| ||| |  | | |
Sbjct: 862 ccagggtataatttacaaatagcgacaaattcccaatttgttttatcttataatgtgtat 921

Query: 900 caaaacccaacagatactagaactttaattccatttttaacaatgattcaa 950
           ||||| ||||| |||||||||||  | |||||||||||||     ||||||
Sbjct: 922 caaaatccaacggatactagaacgatgattccatttttaa-----attcaa 967


 Score = 79 bits (204), Expect = 4e-15
 Identities = 45/50 (90%)
 Strand = Plus / Plus

Query: 1  atgtataaaaattataacttgatccaacttacactaccaatagaaacttc 50
          |||||||||||||||||| |||  |||||||| |||||||| ||||||||
Sbjct: 1  atgtataaaaattataacatgactcaacttactctaccaatggaaacttc 50