Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type II and III secretion system protein |
NC_007005 (Pseudomonas syringae B728a) |
0.0 |
99 |
|
type IV pilus protein, PilN |
NC_004129 (Pseudomonas protegens Pf-5) |
9e-125 |
58 |
|
type IVB pilus formation outer membrane protein |
NC_009656 (Pseudomonas aeruginosa PA7) |
8e-103 |
49 |
|
secretin |
NC_021577 (Pseudomonas aeruginosa RP73) |
3e-102 |
49 |
|
Type IV B pilus protein |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
3e-99 |
49 |
|
type IVB pilus formation outer membrane protein |
NC_018080 (Pseudomonas aeruginosa DK2) |
1e-98 |
49 |
|
type IVB pilus formation outer membrane protein |
NC_020912 (Pseudomonas aeruginosa B136-33) |
2e-98 |
49 |
|
type IV pilus secretin protein PilN2 |
NC_021361 (Pseudomonas fluorescens A506) |
1e-89 |
42 |
|
type IVB pilus formation outer membrane protein |
NC_018746 (Pseudomonas putida ND6) |
5e-74 |
42 |
|
type IVB pilus formation outer membrane protein, R64 PilN family |
NC_020541 (Rhodanobacter sp. 2APBS1) |
1e-69 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AJ870974' AND ph.id_pai_orf='22' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc