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PAthogenisity Island DataBase (PAI DB)

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Homologs of pilU gene of AJ627388

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YpsIP31758_3728
( YP_001402682.1 )

type IV prepilin peptidase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

2e-70

2) YE3499
( YP_001007660.1 )

type IV prepilin peptidase

NC_008800
(Yersinia enterocolitica 8081)

2e-62

3) Ser39006_1489
( YP_008521871.1 )

peptidase A24A prepilin type IV

NC_022268
(Serratia sp. ATCC 39006)

4e-36

• Sequence Alignments

1) YpsIP31758_3728 in NC_009708


> AJ627388|22|G21|49658867|CAF28493.1|Yersinia_pseudotuberculosis_32777|+|19207..19875|pilU|-|putative 
cysteine-type peptidase
Length=222

 Score =  257 bits (962),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 194/198 (98%), Positives = 195/198 (99%), Gaps = 0/198 (0%)

Query  25   DPITRQVSLFLKRHHSLSAFKQQSATRLRYHWLHAVAMTVIAVAPFEGRVFSNMTSMLFV  84
            DPITRQVSLFLKRHHSLSAFKQQSATRLRYHWLHAVAMTVIAVAPFEGRVFSNMTSMLFV
Sbjct  25   DPITRQVSLFLKRHHSLSAFKQQSATRLRYHWLHAVAMTVIAVAPFEGRVFSNMTSMLFV  84

Query  85   PFVYRLSLIDRLSGWLPQEFTWSFlaagllaaagNDELLSHSMTAIALLLFCGSVRIVFG  144
            PFVYRLSL DRLSGWLPQEFTWSFLAAGLL AAGNDELLSHSMTAIALLL+CGSVRIV G
Sbjct  85   PFVYRLSLTDRLSGWLPQEFTWSFLAAGLLVAAGNDELLSHSMTAIALLLICGSVRIVSG  144

Query  145  YYAQSEVLGLGDVWFATAIGawlawplallvlcvglcgFILWHLMSGDVKTGGPLGPWLG  204
            YYAQSEVLGLGDVWFATAIGAWLAWPLALLVLCVGLCGFILWHLMSGDVKTGGPLGPWLG
Sbjct  145  YYAQSEVLGLGDVWFATAIGAWLAWPLALLVLCVGLCGFILWHLMSGDVKTGGPLGPWLG  204

Query  205  HAALLAMIVKVYDPLLMW  222
            HAALLAMIVKVYDPLLMW
Sbjct  205  HAALLAMIVKVYDPLLMW  222

2) YE3499 in NC_008800


> AJ627388|22|G21|49658867|CAF28493.1|Yersinia_pseudotuberculosis_32777|+|19207..19875|pilU|-|putative 
cysteine-type peptidase
Length=222

 Score =  231 bits (861),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 177/222 (80%), Positives = 202/222 (91%), Gaps = 0/222 (0%)

Query  1    MTIITLALPWLFVLPLFGLALWLLDPITRQVILFLNSHHSLPALKPQSATLLHYHWLHaa  60
            MTIITLALPWLFV  LF LAL+LLDPITRQV LFL+ HHSL+A+K QSAT L+YHWLHA 
Sbjct  1    MTIITLALPWLFVPLLFLLALRLLDPITRQVSLFLKRHHSLSAFKQQSATRLRYHWLHAV  60

Query  61   amaviavaPFEGQVFSNMTSVLFVPFIYRLSLTDRLSGWLPQEFTWSCLAAGLLIAVGSG  120
            AM+VIAVAPFEG+VFSNMTS+LFVPF+YRLSLTDRLSGWLPQEFTWS LAAGLL+A G++
Sbjct  61   AMTVIAVAPFEGRVFSNMTSMLFVPFVYRLSLTDRLSGWLPQEFTWSFLAAGLLVAAGND  120

Query  121  EFLSSAMTIIALLLLCGSVRIASGHYAKRELLGLGDVwliaalgawlgwslalFTIGVGL  180
            E+LS +MT IALLL+CGSVRI SG YA+ E+LGLGDVW+ +A+GAWL+W+LAL+ + VGL
Sbjct  121  ELLSHSMTAIALLLICGSVRIVSGYYAQSEVLGLGDVWFATAIGAWLAWPLALLVLCVGL  180

Query  181  CGFILWHQMSGDVETGGPLGPWLGHTALLAMIVKVYDPLLMW  222
            CGFILWH MSGDV TGGPLGPWLGH+ALLAMIVKVYDPLLMW
Sbjct  181  CGFILWHLMSGDVKTGGPLGPWLGHAALLAMIVKVYDPLLMW  222

3) Ser39006_1489 in NC_022268


> AJ627388|22|G21|49658867|CAF28493.1|Yersinia_pseudotuberculosis_32777|+|19207..19875|pilU|-|putative 
cysteine-type peptidase
Length=222

 Score =  143 bits (527),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 0/167 (0%)

Query  60   WLHAMALTVMVMLSSLSRPFELMTSGLFVLFIFRMSLIDTLTGWLPREFTWPFLIAGLCV  119
            WLHA+A+TV+ + +  +R F  MTS LFV F++R+SL D L+GWLP+EFTW+FL AGL V
Sbjct  56   WLHAVAMTVIAVAPFEGRVFSNMTSMLFVPFVYRLSLTDRLSGWLPQEFTWSFLAAGLLV  115

Query  120  AAEHHVLSSHAIMSLILLIAGLLVRKLGERFAHREVLGLGDVWLVAGLGAWFGSPLSLFS  179
            AA ++ L SH++ ++ LL+    VR ++  +A+ EVLGLGDVW+ +++GAW++ PL+L+ 
Sbjct  116  AAGNDELLSHSMTAIALLLICGSVRIVSGYYAQSEVLGLGDVWFATAIGAWLAWPLALLV  175

Query  180  LMGGVMGFILWYAGSSTVSRGGPMGPWLGYSALLSMILSISDPILMW  226
            L  G+ GFILW   S+ V  GGP+GPWLG +ALL+MI+ + DP+LMW
Sbjct  176  LCVGLCGFILWHLMSGDVKTGGPLGPWLGHAALLAMIVKVYDPLLMW  222