Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of orf22 gene of AF346500

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) plu0979
( NP_928313.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-41

2) PAU_00332
( YP_003039170.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

7e-26

3) Dd586_0130
( YP_003331733.1 )

hypothetical protein

NC_013592
(Dickeya dadantii Ech586)

1e-06

4) Dd1591_3979
( YP_003006258.1 )

hypothetical protein

NC_012912
(Dickeya zeae Ech1591)

9e-05

• Sequence Alignments

1) plu0979 in NC_005126


> AF346500|22|G22|27479661|AAO17188.1|Photorhabdus_luminescens_W14|+|22944..23252|orf22|-|Orf22
Length=102

 Score =  161 bits (596),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 98/103 (96%), Positives = 101/103 (99%), Gaps = 1/103 (0%)

Query  1    MSKSAIVLNITYAIFCALFIYMMSYLEEEHYIGGQDIDNLCTVYRELIDDNRDVFAPTCL  60
            MSKSA VLNITYAIFCALFIYMMSYLEEEHYIGGQDIDNLCTVYREL+DDNRDVFAPTCL
Sbjct  1    MSKSA-VLNITYAIFCALFIYMMSYLEEEHYIGGQDIDNLCTVYRELVDDNRDVFAPTCL  59

Query  61   LIMSPLIYATVKKRFKSLSLNVITFALLGYWMWRFFIRLIVCV  103
            LIMSPLIYATVKKRFKSLSLN+ITFALLGYW+WRFFIRLIVC 
Sbjct  60   LIMSPLIYATVKKRFKSLSLNIITFALLGYWIWRFFIRLIVCT  102

2) PAU_00332 in NC_012962


> AF346500|22|G22|27479661|AAO17188.1|Photorhabdus_luminescens_W14|+|22944..23252|orf22|-|Orf22
Length=102

 Score =  110 bits (399),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 61/100 (61%), Positives = 76/100 (76%), Gaps = 1/100 (1%)

Query  5    STVLIVGYVFFCVLFIYMMSYFEKEYYIDGIDIKNICDVYNALVVDDTRDFDAPVSLLFL  64
            S+VL + Y +FC LFIYMMSY+E E YI+G DI N+C VY  LV DD RD  AP  LL++
Sbjct  4    SAVLNITYAIFCALFIYMMSYLEEEHYIGGQDIDNLCTVYRELV-DDNRDVFAPTCLLIM  62

Query  65   FPLFYHAAKKRFKSLFFNVISVVLLAYWVWRFFIRLIVCI  104
             PL+Y + KKRFKSL +N+I+  LL+YW+WRFFIRLIVC 
Sbjct  63   SPLIYATVKKRFKSLSLNIITFALLGYWIWRFFIRLIVCT  102

3) Dd586_0130 in NC_013592


> AF346500|22|G22|27479661|AAO17188.1|Photorhabdus_luminescens_W14|+|22944..23252|orf22|-|Orf22
Length=102

 Score = 46.1 bits (155),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 32/78 (42%), Positives = 50/78 (65%), Gaps = 2/78 (2%)

Query  24   KEESYIDGKEVLNACMAFKTFVTDDIRDVTApisffllilpffiilfKERFKKTSTIIFI  83
             EE YI+G+++ N C  ++ +V D+ RDV AP  ++++   ++  + K RFK  S  I+ 
Sbjct  26   EEEHYIGGQDIDNLCTVYRELVDDN-RDVFAPTCLLIMSPLIYATV-KKRFKSLSLNIIT  83

Query  84   SFLLLYWLWRFFIRLNIC  101
              LL YW+WRFFIRL +C
Sbjct  84   FALLGYWIWRFFIRLIVC  101

4) Dd1591_3979 in NC_012912


> AF346500|22|G22|27479661|AAO17188.1|Photorhabdus_luminescens_W14|+|22944..23252|orf22|-|Orf22
Length=102

 Score = 39.8 bits (131),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 34/78 (44%), Positives = 50/78 (65%), Gaps = 2/78 (2%)

Query  24   KEESYIDGKEIINACMAFKTFLVDDIRDVTApisfiffilpffiiisKERfkkistiifi  83
             EE YI+G++I N C  ++  LVDD RDV AP  +++    ++  + K RFK +S  I+ 
Sbjct  26   EEEHYIGGQDIDNLCTVYRE-LVDDNRDVFAPTCLLIMSPLIYATV-KKRFKSLSLNIIT  83

Query  84   sllflYWLWRFFIRLNIC  101
              L+ YW+WRFFIRL +C
Sbjct  84   FALLGYWIWRFFIRLIVC  101