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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AF200692

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SFxv_3287
( YP_005728618.1 )

hypothetical protein

NC_017328
(Shigella flexneri 2002017)

0.0

100

2) S3196
( NP_838480.1 )

hypothetical protein

NC_004741
(Shigella flexneri 2457T)

0.0

100

3) SF2992
( NP_708766.2 )

hypothetical protein

NC_004337
(Shigella flexneri 301)

0.0

100

4) ECUMN_3401
( YP_002414068.1 )

hypothetical protein

NC_011751
(Escherichia coli UMN026)

0.0

5) c1274
( NP_753188.1 )

hypothetical protein

NC_004431
(Escherichia coli CFT073)

0.0

6) i14_1167
( YP_006153292.1 )

hypothetical protein

NC_017652
(Escherichia coli clone D i14)

0.0

7) i02_1167
( YP_006148373.1 )

hypothetical protein

NC_017651
(Escherichia coli clone D i2)

0.0

8) ECED1_5178
( YP_002400912.1 )

hypothetical protein

NC_011745
(Escherichia coli ED1a)

0.0

9) ECABU_c12310
( YP_006105328.1 )

hypothetical protein

NC_017631
(Escherichia coli ABU 83972)

0.0

10) EC55989_3358
( YP_002404321.1 )

membrane protein, yeeR

NC_011748
(Escherichia coli 55989)

0.0

11) EC042_4510
( YP_006098788.1 )

hypothetical protein

NC_017626
(Escherichia coli 042)

0.0

12) O3M_04250
( YP_006768529.1 )

membrane protein, yeeR

NC_018650
(Escherichia coli 2009EL-2050)

0.0

13) O3O_21440
( YP_006782636.1 )

membrane protein, yeeR

NC_018661
(Escherichia coli 2009EL-2071)

0.0

14) O3K_04215
( YP_006777573.1 )

membrane protein, yeeR

NC_018658
(Escherichia coli 2011C-3493)

0.0

15) EC042_2243
( YP_006096553.1 )

hypothetical protein

NC_017626
(Escherichia coli 042)

0.0

16) ECO26_2902
( YP_003229867.1 )

hypothetical protein

NC_013361
(Escherichia coli 11368)

0.0

17) yeeR
( YP_006118000.1 )

putative inner membrane protein

NC_017633
(Escherichia coli ETEC H10407)

0.0

18) ETEC_3218A
( YP_006116758.1 )

integral membrane protein

NC_017633
(Escherichia coli ETEC H10407)

0.0

19) ECED1_4884
( YP_002400654.1 )

hypothetical protein

NC_011745
(Escherichia coli ED1a)

0.0

20) c3664
( NP_755539.1 )

hypothetical protein

NC_004431
(Escherichia coli CFT073)

0.0

21) yeeR
( YP_003045988.1 )

hypothetical protein

NC_012967
(Escherichia coli REL606)

0.0

• Sequence Alignments

1) SFxv_3287 in NC_017328


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1184 bits (4490),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 816/816 (100%), Positives = 816/816 (100%), Gaps = 0/816 (0%)

Query  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  202
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLa  682
            PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838
            LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

2) S3196 in NC_004741


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1184 bits (4490),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 816/816 (100%), Positives = 816/816 (100%), Gaps = 0/816 (0%)

Query  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  202
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLa  682
            PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838
            LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

3) SF2992 in NC_004337


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1184 bits (4490),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 816/816 (100%), Positives = 816/816 (100%), Gaps = 0/816 (0%)

Query  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  202
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLa  682
            PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838
            LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

4) ECUMN_3401 in NC_011751


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1173 bits (4448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 804/816 (99%), Positives = 814/816 (99%), Gaps = 0/816 (0%)

Query  25   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQSGLTPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQ+GLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAIRQTL  204
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAI QTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  264
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQDIYERSYTGFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQDIYERSYTGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  504
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVISLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSV+SLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  684
            PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

5) c1274 in NC_004431


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1171 bits (4440),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 802/816 (99%), Positives = 813/816 (99%), Gaps = 0/816 (0%)

Query  25   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  204
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  264
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQDIYERSHTGFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQDIYERS TGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAVRSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  504
            RLVSGTEIQTKYCSTA RSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTTSVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LT+SVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  684
            PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEETLPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEE++PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

6) i14_1167 in NC_017652


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1171 bits (4442),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 803/816 (99%), Positives = 813/816 (99%), Gaps = 0/816 (0%)

Query  25   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  204
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  264
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQDIYERSHTGFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQDIYERS TGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAVRSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  504
            RLVSGTEIQTKYCSTA RSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  684
            PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEETLPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEE++PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

7) i02_1167 in NC_017651


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1171 bits (4442),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 803/816 (99%), Positives = 813/816 (99%), Gaps = 0/816 (0%)

Query  25   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  204
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  264
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQDIYERSHTGFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQDIYERS TGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAVRSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  504
            RLVSGTEIQTKYCSTA RSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  684
            PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEETLPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEE++PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

8) ECED1_5178 in NC_011745


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1171 bits (4442),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 802/816 (99%), Positives = 811/816 (99%), Gaps = 0/816 (0%)

Query  25   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGIFLTIAGMIISFMWGLD  84
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAG+FLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaagllvlPVQIRTIQQSGLTPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALAAGLL LPVQIRTIQQ+GLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  204
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  264
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQDISERSYTGFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQDI ERSYTGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  504
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVISLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSV+SLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  684
            PTVR ALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILTMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KIL+MIQEQVTWLAGSFLLTGHEIENLN NLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEEAFPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEEAFPPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

9) ECABU_c12310 in NC_017631


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1170 bits (4439),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 803/816 (99%), Positives = 813/816 (99%), Gaps = 0/816 (0%)

Query  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  202
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  262
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQDIYERSHTGFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQDIYERS TGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAVRSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502
            RLVSGTEIQTKYCSTA RSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  682
            PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGNMVNRLEETLPPELPA  838
            LVVSIIRQRPVMEYDASHLG+MVNRLEE++PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

10) EC55989_3358 in NC_011748


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1167 bits (4427),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 797/816 (98%), Positives = 812/816 (99%), Gaps = 0/816 (0%)

Query  25   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  204
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  264
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+IYER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMRNKI  504
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRLALQKGTGTGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGTQFIRNLa  684
            PTVR ALQKGTG+GNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISG+QFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQVTWLAGSFLLTGHETENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQVTWLAGSFLLTGHE ENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

11) EC042_4510 in NC_017626


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1166 bits (4422),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 797/816 (98%), Positives = 812/816 (99%), Gaps = 0/816 (0%)

Query  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  202
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  262
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+IYER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMRNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRLALQKGTGTGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGTQFIRNLa  682
            PTVR ALQKGTG+GNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISG+QFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHETENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHE ENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA  838
            LVVSIIRQRPVMEYDASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

12) O3M_04250 in NC_018650


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1166 bits (4422),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 797/816 (98%), Positives = 812/816 (99%), Gaps = 0/816 (0%)

Query  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  202
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  262
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+IYER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMRNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRLALQKGTGTGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGTQFIRNLa  682
            PTVR ALQKGTG+GNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISG+QFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHETENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHE ENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA  838
            LVVSIIRQRPVMEYDASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

13) O3O_21440 in NC_018661


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1166 bits (4422),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 797/816 (98%), Positives = 812/816 (99%), Gaps = 0/816 (0%)

Query  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  202
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  262
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+IYER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMRNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRLALQKGTGTGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGTQFIRNLa  682
            PTVR ALQKGTG+GNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISG+QFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHETENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHE ENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA  838
            LVVSIIRQRPVMEYDASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

14) O3K_04215 in NC_018658


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1166 bits (4422),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 797/816 (98%), Positives = 812/816 (99%), Gaps = 0/816 (0%)

Query  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaagllalPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSAYAPLIALQFDISPSlmwwggllywlaalvtllwaaSQIQALKRLTSAISQTL  202
            FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  262
            EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+IYER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMRNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRLALQKGTGTGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGTQFIRNLa  682
            PTVR ALQKGTG+GNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISG+QFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHETENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHE ENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA  838
            LVVSIIRQRPVMEYDASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

15) EC042_2243 in NC_017626


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1155 bits (4379),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 787/816 (97%), Positives = 808/816 (99%), Gaps = 0/816 (0%)

Query  25   RALISTASALAGLILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RAL STASALAG+ILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaggllaVPLQIKNIQQNGITPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALA+GLLA+P+QI+ IQQNG+TPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FFLMACSACAPLIALQYDISPSlmwwggllywlaalvtllwaaSQIQALKKLTCAISQTL  204
            FFLMACSA APLIALQ+DISPSLMWWGGLLYWLAALVTLLWAASQIQALK+LT AISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  264
            EEQPVLNSKSWL+SLQNDYSLP++LTERIWLTLISQRISRGELREFELADGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+IYER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKI  504
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGN+GPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  684
            PTVR ALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQVTWLAGSFLLTGHEIENLN NLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

16) ECO26_2902 in NC_013361


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1153 bits (4371),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 786/816 (97%), Positives = 808/816 (99%), Gaps = 0/816 (0%)

Query  23   RALISTASALAGLILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RAL STASALAG+ILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaggllaVPLQIKNIQQNGITPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALA+GLLA+P+QI+ IQQNG+TPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSACAPLIALQYDISPSlmwwggllywlaalvtllwaaSQIQALKKLTCAISQTL  202
            FFLMACSA APLIALQ+DISPSLMWWGGLLYWLAALVTLLWAASQIQALK+LT AISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRISQGELREFELADGNWLLNNAWY  262
            EEQPVLNSKSWL+SLQNDYSLP++LTERIWLTLISQRIS+GELREFELADGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+IYER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGN+GPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  682
            PTVR ALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHEIENLN NLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA  838
            LVVSIIRQRPVMEYDASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

17) yeeR in NC_017633


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1152 bits (4368),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 784/816 (97%), Positives = 807/816 (99%), Gaps = 0/816 (0%)

Query  25   RALISTASALAGLILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RAL STASALAG+ILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaggllaVPLQIKNIQQNGITPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALA+GLLA+P+QI+ IQQNG+TPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FFLMACSACAPLIALQYDISPSlmwwggllywlaalvtllwaaSQIQALKKLTCAISQTL  204
            FFLMACSA APLIALQ+DISPSLMWWGGLLYWLAALVTLLWAASQIQALK+LT AISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  264
            EEQPVLNSKSWL+SLQNDYSLP++LTERIWLTLISQRISRGELREFELADGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIHERPYNSFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+I ER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKI  504
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGN+GPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGTQFIRNLa  684
            PTVR ALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISG+QFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQVTWLAGSFLLTGHEIENLN NLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYEASHLGNMVNRLEEALPPELPA  840
            LVVSIIRQRPVMEY+ASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

18) ETEC_3218A in NC_017633


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1151 bits (4366),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 784/816 (97%), Positives = 807/816 (99%), Gaps = 0/816 (0%)

Query  23   RALISTASALAGLILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82
            RAL STASALAG+ILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaggllaVPLQIKNIQQNGITPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALA+GLLA+P+QI+ IQQNG+TPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSACAPLIALQYDISPSlmwwggllywlaalvtllwaaSQIQALKKLTCAISQTL  202
            FFLMACSA APLIALQ+DISPSLMWWGGLLYWLAALVTLLWAASQIQALK+LT AISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262
            EEQPVLNSKSWL+SLQNDYSLP++LTERIWLTLISQRISRGELREFELADGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIHERPYNSFISDA  382
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+I ER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGN+GPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGTQFIRNLa  682
            PTVR ALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISG+QFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHEIENLN NLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYEASHLGNMVNRLEEALPPELPA  838
            LVVSIIRQRPVMEY+ASHLG+MVNRLEEA+PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

19) ECED1_4884 in NC_011745


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1150 bits (4363),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 784/816 (97%), Positives = 805/816 (99%), Gaps = 0/816 (0%)

Query  25   RALISTASALAGLILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RAL STASALAG+ILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaggllaVPLQIKNIQQNGITPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALA+GLLA+P+QI+ IQQNG+TPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FCLMACSACAPLIALQYDISPSlmwwggllywlaalvtllwaaSQIQALKKLTCAISQTL  204
            F LMACSA APLIALQ+DISPSLMWWGGLLYWLAALVTLLWAASQIQALK+LT AISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRISRGELREFELSDGNWLLNNAWY  264
            EEQPVLNSKSWL+SLQNDYSLP++LTERIWLTLISQRISRGELREFEL+DGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQ+IYER+Y +FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKI  504
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGN+GPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESATYDIAEGSVVSLAAGGISFA  564
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIES TYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRLALQKGNGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  684
            PTVR ALQKG GAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQVTWLAGSFLLTGHEIENLN NLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEEAFPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEEAFPPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

20) c3664 in NC_004431


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1147 bits (4350),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/816 (96%), Positives = 804/816 (99%), Gaps = 0/816 (0%)

Query  25   RALISTASALAGLILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  84
            RAL STASALAG+ILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  85   GKHIALEAHTFDSVKFIlttalaggllaVPLQIKNIQQNGITPEDISKEINGYYCCFYTA  144
            GKHIALEAHTFDSVKFILTTALA+GLLA+P+QI+ IQQNG+TPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  145  FCLMACSACAPLIALQYDISPSlmwwggllywlaalvtllwaaSQIQALKKLTCAIRQTL  204
            F LMACSA APLIALQ+DISPSLMWWGGLLYWLAALVTLLWAASQIQALK+LT AI QTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  205  EEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRISRGELREFELADGNWLLDNAWY  264
            EEQPVLNSKSWL+SLQNDYSLP++LTERIWLTLISQRISRGELREFELADGNWLL+NAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  265  ERNMAGFNEKLRESLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  324
            ERNMAGFNE+L+E+LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  325  SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQDIYERSHTGFISDA  384
            SFHHVDELRICASCGLTEVHHAPENHKP PEWYCSSLC+ETETLCQDIYERS TGFISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  385  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  444
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  445  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  504
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  505  REGKVPGVTDPEEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  564
            REGKVPGVTDP EASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  565  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  624
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  625  PTVRQALQKGTGAGNISALNKVMKGSLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  684
            PTVRQALQKGTGAGNISALNKVMKG+LVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  685  vasscvaggavrsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGALVEEDRV  744
            VASS VAGGAV SVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  745  KILAMIQEQMTWLAGSFLQTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  804
            KILAMIQEQ+TWLAGSFL TGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  805  LVVSIIRQRPVMEYDASHLGNMVNRLEETLPPELPA  840
            LVVSIIRQRPVMEYDASHLG+MVNRLEE++PPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838

21) yeeR in NC_012967


> AF200692|22|G22|12643223|AAK00475.1|Shigella_flexneri_2a_YSH6000T|+|39166..41682|-|-|unknown
Length=838

 Score = 1145 bits (4341),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 782/816 (96%), Positives = 803/816 (99%), Gaps = 0/816 (0%)

Query  23   RALISTASALAGLILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISLMWGLD  82
            RAL STASALAG+ILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIIS+MWGLD
Sbjct  23   RALTSTASALAGFILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLD  82

Query  83   GKHIALEAHTFDSVKFIlttalaggllaVPLQIKNIQQNGITPEDISKEINGYYCCFYTA  142
            GKHIALEAHTFDSVKFILTTALA+GLLA+P+QI+ IQQNG+TPEDISKEINGYYCCFYTA
Sbjct  83   GKHIALEAHTFDSVKFILTTALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTA  142

Query  143  FFLMACSACAPLIALQYDISPSlmwwggllywlaalvtllwaaSQIQALKKLTCAISQTL  202
            FFLMACSA APLIALQ+DISPSLMWWGGLLYWLAALVTLLWAASQIQALK+LT AISQTL
Sbjct  143  FFLMACSAYAPLIALQFDISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTL  202

Query  203  EEQPVLNSKSWQTSLQNDYSLPDSLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262
            EEQPVLNSKSW +SLQNDYSLP++LTERIWLTLISQRISRGELREFELADGNWLLNNAWY
Sbjct  203  EEQPVLNSKSWLSSLQNDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWY  262

Query  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322
            ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV
Sbjct  263  ERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFV  322

Query  323  SFHHVDELRVCASCGLTEVHHAPENHKPDPEWYCSSLCRETEILCQEIYERPYNCFISDA  382
            SFHHVDELR+CASCGLTEVHHAPENHKP PEWYCSSLC+ETE LCQ+IYER+Y  FISDA
Sbjct  323  SFHHVDELRICASCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDA  382

Query  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442
            TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD
Sbjct  383  TANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGAD  442

Query  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYTGNNGPMQLEVPRDQYAGAVETMRNKI  502
            RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRY GN+GPMQLEVPRDQYAGAVETM+NKI
Sbjct  443  RLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKI  502

Query  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562
            REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA
Sbjct  503  REGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFA  562

Query  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTAS  622
            LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRL+VVQGMLKHIDFSTAS
Sbjct  563  LTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTAS  622

Query  623  PTVRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLa  682
            PTVR ALQKGTGAGNISALNKVMKGTLVTSLALVAVTT+PDMIKMLRGRISGAQFIRNLA
Sbjct  623  PTVRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA  682

Query  683  vassgvaggavgsvaggILFSPLGPFGALTgrvvggvlggMIASAVSGKIAGVLVEEDRV  742
            VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAG LVEEDRV
Sbjct  683  VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEEDRV  742

Query  743  KILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNMLIKP  802
            KILAMIQEQVTWLAGSFLLTGHEIENLN NLARVIDQNALEIIFAAGIQQRAATNMLIKP
Sbjct  743  KILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNMLIKP  802

Query  803  LVVSIIRQRPVMEYDASHLGNMVNRLEEAFPPELPA  838
            LVVSIIRQRPVMEYDASHLG+MVNRLEEAFPPELPA
Sbjct  803  LVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA  838