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Homologs of HMPREF0351_12145 gene of NC_017960_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) xerC
( YP_005355349.1 )

site-specific tyrosine recombinase XerC-family

NC_017022
(Enterococcus faecium Aus0004)

6e-174

100

2) HMPREF0351_12145
( YP_006376751.1 )

bacteriophage integrase

NC_017960
(Enterococcus faecium DO)

6e-174

100

3) xerC
( YP_005355365.1 )

site-specific tyrosine recombinase XerC-family

NC_017022
(Enterococcus faecium Aus0004)

2e-123

• Sequence Alignments

1) xerC in NC_017022


> NC_017960_P1|21|G21|389869328|YP_006376751.1|Enterococcus_faecium_DO|+|12489..13634|-|HMPREF0351_12145|bacteriophage 
integrase
Length=381

 Score =  603 bits (2278),  Expect = 6e-174, Method: Compositional matrix adjust.
 Identities = 381/381 (100%), Positives = 381/381 (100%), Gaps = 0/381 (0%)

Query  1    MATFKQYETKKGKFWLYEAYLGMNKMTGKPDKVRRRGYKTKKEAQLALSRLQVDYDKNGI  60
            MATFKQYETKKGKFWLYEAYLGMNKMTGKPDKVRRRGYKTKKEAQLALSRLQVDYDKNGI
Sbjct  1    MATFKQYETKKGKFWLYEAYLGMNKMTGKPDKVRRRGYKTKKEAQLALSRLQVDYDKNGI  60

Query  61   KKANNETFKEVYDLWLETYKTTVREATFMKTEIKFRKWILPKYGNLRVNEVTVKKAQQIV  120
            KKANNETFKEVYDLWLETYKTTVREATFMKTEIKFRKWILPKYGNLRVNEVTVKKAQQIV
Sbjct  61   KKANNETFKEVYDLWLETYKTTVREATFMKTEIKFRKWILPKYGNLRVNEVTVKKAQQIV  120

Query  121  NSWAETTDQYKVLHSTSKRIFSYAINLGIIETNPLDNVLMPKRTTTKHKEKVKVYSKEQL  180
            NSWAETTDQYKVLHSTSKRIFSYAINLGIIETNPLDNVLMPKRTTTKHKEKVKVYSKEQL
Sbjct  121  NSWAETTDQYKVLHSTSKRIFSYAINLGIIETNPLDNVLMPKRTTTKHKEKVKVYSKEQL  180

Query  181  ITLFDYLNSKPETYRNDFDKTLLRFLFYSGVRISEALALNWSDIDFQENTVTINKTLSQS  240
            ITLFDYLNSKPETYRNDFDKTLLRFLFYSGVRISEALALNWSDIDFQENTVTINKTLSQS
Sbjct  181  ITLFDYLNSKPETYRNDFDKTLLRFLFYSGVRISEALALNWSDIDFQENTVTINKTLSQS  240

Query  241  KNGYKISDPKTDCSAGVLPLDERTISILKKWQINQRKYMLTLGVTDPTMIFCGIYKELIT  300
            KNGYKISDPKTDCSAGVLPLDERTISILKKWQINQRKYMLTLGVTDPTMIFCGIYKELIT
Sbjct  241  KNGYKISDPKTDCSAGVLPLDERTISILKKWQINQRKYMLTLGVTDPTMIFCGIYKELIT  300

Query  301  HHAIYARLITICEKAMVPFLGVHVARHTHASMLLDAGATMVEVQTRLRHTKISQTIDCYG  360
            HHAIYARLITICEKAMVPFLGVHVARHTHASMLLDAGATMVEVQTRLRHTKISQTIDCYG
Sbjct  301  HHAIYARLITICEKAMVPFLGVHVARHTHASMLLDAGATMVEVQTRLRHTKISQTIDCYG  360

Query  361  HLAketkektvekLVQHLNID  381
            HLAKETKEKTVEKLVQHLNID
Sbjct  361  HLAKETKEKTVEKLVQHLNID  381

2) HMPREF0351_12145 in NC_017960


> NC_017960_P1|21|G21|389869328|YP_006376751.1|Enterococcus_faecium_DO|+|12489..13634|-|HMPREF0351_12145|bacteriophage 
integrase
Length=381

 Score =  603 bits (2278),  Expect = 6e-174, Method: Compositional matrix adjust.
 Identities = 381/381 (100%), Positives = 381/381 (100%), Gaps = 0/381 (0%)

Query  1    MATFKQYETKKGKFWLYEAYLGMNKMTGKPDKVRRRGYKTKKEAQLALSRLQVDYDKNGI  60
            MATFKQYETKKGKFWLYEAYLGMNKMTGKPDKVRRRGYKTKKEAQLALSRLQVDYDKNGI
Sbjct  1    MATFKQYETKKGKFWLYEAYLGMNKMTGKPDKVRRRGYKTKKEAQLALSRLQVDYDKNGI  60

Query  61   KKANNETFKEVYDLWLETYKTTVREATFMKTEIKFRKWILPKYGNLRVNEVTVKKAQQIV  120
            KKANNETFKEVYDLWLETYKTTVREATFMKTEIKFRKWILPKYGNLRVNEVTVKKAQQIV
Sbjct  61   KKANNETFKEVYDLWLETYKTTVREATFMKTEIKFRKWILPKYGNLRVNEVTVKKAQQIV  120

Query  121  NSWAETTDQYKVLHSTSKRIFSYAINLGIIETNPLDNVLMPKRTTTKHKEKVKVYSKEQL  180
            NSWAETTDQYKVLHSTSKRIFSYAINLGIIETNPLDNVLMPKRTTTKHKEKVKVYSKEQL
Sbjct  121  NSWAETTDQYKVLHSTSKRIFSYAINLGIIETNPLDNVLMPKRTTTKHKEKVKVYSKEQL  180

Query  181  ITLFDYLNSKPETYRNDFDKTLLRFLFYSGVRISEALALNWSDIDFQENTVTINKTLSQS  240
            ITLFDYLNSKPETYRNDFDKTLLRFLFYSGVRISEALALNWSDIDFQENTVTINKTLSQS
Sbjct  181  ITLFDYLNSKPETYRNDFDKTLLRFLFYSGVRISEALALNWSDIDFQENTVTINKTLSQS  240

Query  241  KNGYKISDPKTDCSAGVLPLDERTISILKKWQINQRKYMLTLGVTDPTMIFCGIYKELIT  300
            KNGYKISDPKTDCSAGVLPLDERTISILKKWQINQRKYMLTLGVTDPTMIFCGIYKELIT
Sbjct  241  KNGYKISDPKTDCSAGVLPLDERTISILKKWQINQRKYMLTLGVTDPTMIFCGIYKELIT  300

Query  301  HHAIYARLITICEKAMVPFLGVHVARHTHASMLLDAGATMVEVQTRLRHTKISQTIDCYG  360
            HHAIYARLITICEKAMVPFLGVHVARHTHASMLLDAGATMVEVQTRLRHTKISQTIDCYG
Sbjct  301  HHAIYARLITICEKAMVPFLGVHVARHTHASMLLDAGATMVEVQTRLRHTKISQTIDCYG  360

Query  361  HLAketkektvekLVQHLNID  381
            HLAKETKEKTVEKLVQHLNID
Sbjct  361  HLAKETKEKTVEKLVQHLNID  381

3) xerC in NC_017022


> NC_017960_P1|21|G21|389869328|YP_006376751.1|Enterococcus_faecium_DO|+|12489..13634|-|HMPREF0351_12145|bacteriophage 
integrase
Length=381

 Score =  435 bits (1640),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 255/381 (67%), Positives = 319/381 (84%), Gaps = 1/381 (0%)

Query  1    MATIKQYEKKDGTKAWLFQTYLGISPLTGKEVRTTRRNFKTKKEAQIELNRLLVDFEENG  60
            MAT+KQYE K G K WL+++YLG++ +TGK  +  RR +KTKKEAQ+ L+RL VD++ NG
Sbjct  1    MATFKQYETKKG-KFWLYEAYLGMNKMTGKPDKVRRRGYKTKKEAQLALSRLQVDYDKNG  59

Query  61   LKKETNETFKEVYDLWYESYKTTVKEVTQLKIEIKFNKWILPKYGQFRIKEITTKHVQKI  120
            +KK  NETFKEVYDLW E+YKTTV+E T +K EIKF KWILPKYG++R++E+T K  Q+I
Sbjct  60   IKKANNETFKEVYDLWLETYKTTVREATFMKTEIKFRKWILPKYGNLRVNEVTVKKAQQI  119

Query  121  LNQWAKTTDQYKVLHSTASRIFKYAMTLGIITKNPCELVIMPNRNVEKKKDTVKIYSRDQ  180
            +N WA TTDQYKVLHST+ RIF YA+ LGII  NP + V+MP+R   K K+ VK+YS++Q
Sbjct  120  VNSWAETTDQYKVLHSTSKRIFSYAINLGIIETNPLDNVLMPKRTTTKHKEKVKVYSKEQ  179

Query  181  LESLFQYLESKRSTYRADYDKTLLRFLFFSGCRISEALALDWSDIDFDSNTVTINKTLSQ  240
            L +LF+YL+SK  TYR D+DKTLLRFLF+SG RISEALAL+WSDIDF+ NTVTINKTLSQ
Sbjct  180  LITLFDYLNSKPETYRNDFDKTLLRFLFYSGVRISEALALNWSDIDFQENTVTINKTLSQ  239

Query  241  TKYGYKISSPKTRNSYGSLSLDNKTINWLKKWQINQKRYMLTLGITDPTMIFCGIYKEII  300
            +K GYKIS PKT  S G L+LD++TI+ LKKWQINQ++YMLTLG+TDPTMIFCGIYKE+I
Sbjct  240  SKNGYKISDPKTDCSAGVLPLDERTISILKKWQINQRKYMLTLGVTDPTMIFCGIYKELI  299

Query  301  TKHAIYSRMITICKNSGIPFLGNHVTRHTHASMLLESGVSMKEVQERLRHSSIKLTMDTY  360
            T HAIY+R+ITIC ++ +PFLG HV+RHTHASMLL++G +M EVQ RLRH+ I  T+D Y
Sbjct  300  THHAIYARLITICEKAMVPFLGVHVARHTHASMLLDAGATMVEVQTRLRHTKISQTIDCY  359

Query  361  AHLtketkektvekLAEHLNF  381
            +HL+KETKEKTVEKL +HLN+
Sbjct  360  GHLAKETKEKTVEKLVQHLNI  380