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Homologs of pilR gene of NC_004631_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) pilR
( NP_458634.1 )

putative membrane protein

NC_003198
(Salmonella enterica CT18)

3e-153

100

2) STBHUCCB_44970
( YP_005219917.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

3e-153

100

3) pilR
( YP_002639905.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

3e-153

100

4) pilR
( NP_807845.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

3e-153

100

5) TY21A_21620
( YP_007928484.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

2e-146

6) pilR
( NP_928384.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

8e-75

7) ECSE_P1-0111
( YP_002296136.1 )

PilR protein

NC_011419
(Escherichia coli SE11)

2e-72

8) YE3501
( YP_001007662.1 )

type IV pilus integral membrane protein

NC_008800
(Yersinia enterocolitica 8081)

1e-70

9) SEEH1578_00595
( YP_008248855.1 )

integral membrane protein

NC_021811
(Salmonella enterica 41578)

8e-69

10) CFSAN002069_23045
( YP_008253312.1 )

pilus biosynthesis protein PilR

NC_021813
(Salmonella enterica CFSAN002069)

8e-69

11) pilR
( YP_006203610.1 )

pilus integral membrane protein

NC_017718
(Salmonella enterica SL1344)

8e-69

12) SeHA_A0113
( YP_002043948.1 )

integral membrane protein

NC_011081
(Salmonella enterica SL476)

8e-69

13) pilR
( YP_006200934.1 )

integral membrane protein

NC_017675
(Salmonella enterica ST4/74)

8e-69

14) EKO11_4732
( YP_005280349.1 )

type II secretion system F domain-containing protein

NC_016904
(Escherichia coli KO11FL)

2e-61

15) pilR
( YP_006127341.1 )

Type IVB thin prepilin integral membrane protein

NC_017637
(Escherichia coli W)

2e-61

16) WFL_23660
( YP_006176110.1 )

putative transmembrane protein

NC_017665
(Escherichia coli W)

2e-61

17) O3K_25697
( YP_006781737.1 )

putative transmembrane protein

NC_018659
(Escherichia coli 2011C-3493)

3e-61

18) pilR
( YP_006137025.1 )

IncI1 conjugal transfer pilus biogenesis protein PilR

NC_017642
(Escherichia coli UMNK88)

3e-61

19) pilR
( YP_005197433.1 )

type IV pilus biogenesis protein PilR

NC_016816
(Pantoea ananatis LMG 5342)

7e-61

20) PAGR_g3869
( YP_005994577.1 )

type IV pilus biogenesis protein PilR

NC_017554
(Pantoea ananatis PA13)

3e-60

21) Ser39006_1486
( YP_008521868.1 )

Type II secretion system F domain-containing protein

NC_022268
(Serratia sp. ATCC 39006)

1e-59

22) pilR
( YP_001402684.1 )

type IV pilus biogenesis protein PilR

NC_009708
(Yersinia pseudotuberculosis IP 31758)

4e-59

23) SPAB_05361
( YP_001591467.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-58

24) EJP617_06740
( YP_005817242.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

2e-58

25) ECL_00420
( YP_003610935.1 )

type IV pilus biogenesis protein PilR

NC_014121
(Enterobacter cloacae ATCC 13047)

5e-54

• Sequence Alignments

1) pilR in NC_012125


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  534 bits (2015),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 361/361 (100%), Positives = 361/361 (100%), Gaps = 0/361 (0%)

Query  1    MSPLYrlrralarrffTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60
            MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG
Sbjct  1    MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60

Query  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCrrr  120
            FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR
Sbjct  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR  120

Query  121  irqaimrmaVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180
            IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH
Sbjct  121  IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180

Query  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240
            GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG
Sbjct  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240

Query  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300
            VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG
Sbjct  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300

Query  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360
            DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ
Sbjct  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360

Query  361  Y  361
            Y
Sbjct  361  Y  361

2) pilR in NC_003198


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  534 bits (2015),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 361/361 (100%), Positives = 361/361 (100%), Gaps = 0/361 (0%)

Query  1    MSPLYrlrralarrffTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60
            MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG
Sbjct  1    MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60

Query  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCrrr  120
            FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR
Sbjct  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR  120

Query  121  irqaimrmaVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180
            IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH
Sbjct  121  IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180

Query  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240
            GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG
Sbjct  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240

Query  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300
            VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG
Sbjct  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300

Query  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360
            DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ
Sbjct  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360

Query  361  Y  361
            Y
Sbjct  361  Y  361

3) STBHUCCB_44970 in NC_016832


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  534 bits (2015),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 361/361 (100%), Positives = 361/361 (100%), Gaps = 0/361 (0%)

Query  1    MSPLYrlrralarrffTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60
            MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG
Sbjct  1    MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60

Query  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCrrr  120
            FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR
Sbjct  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR  120

Query  121  irqaimrmaVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180
            IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH
Sbjct  121  IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180

Query  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240
            GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG
Sbjct  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240

Query  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300
            VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG
Sbjct  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300

Query  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360
            DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ
Sbjct  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360

Query  361  Y  361
            Y
Sbjct  361  Y  361

4) pilR in NC_004631


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  534 bits (2015),  Expect = 3e-153, Method: Compositional matrix adjust.
 Identities = 361/361 (100%), Positives = 361/361 (100%), Gaps = 0/361 (0%)

Query  1    MSPLYrlrralarrffTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60
            MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG
Sbjct  1    MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60

Query  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCrrr  120
            FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR
Sbjct  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR  120

Query  121  irqaimrmaVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180
            IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH
Sbjct  121  IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180

Query  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240
            GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG
Sbjct  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240

Query  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300
            VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG
Sbjct  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300

Query  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360
            DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ
Sbjct  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360

Query  361  Y  361
            Y
Sbjct  361  Y  361

5) TY21A_21620 in NC_021176


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  511 bits (1929),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 360/361 (99%), Positives = 360/361 (99%), Gaps = 0/361 (0%)

Query  1    MSPLYrlrralarrffTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60
            MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG
Sbjct  1    MSPLYRLRRALARRFFTSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFG  60

Query  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCrrr  120
            FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR
Sbjct  61   FLVDDCRAALTDNSGDNSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRR  120

Query  121  irqaimrmaVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180
            IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH
Sbjct  121  IRQAIMRMAVYPLGCIAMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEH  180

Query  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240
            GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG
Sbjct  181  GVVMGAGLALLVAWTRWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAG  240

Query  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300
            VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG
Sbjct  241  VRTLTALQVIHRFASPWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSG  300

Query  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFaligvvvvavieaiSMTESMGQ  360
            DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEA SMTESMGQ
Sbjct  301  DGAAQMIARFGQEWLEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMGQ  360

Query  361  Y  361
            Y
Sbjct  361  Y  361

6) pilR in NC_005126


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  274 bits (1024),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 171/345 (50%), Positives = 261/345 (76%), Gaps = 7/345 (2%)

Query  21   PSYRIIFYEALRFLLENKIPLLKALRQIRDVYTHFDTHWHPFAELIDDCISALTDNSQTN  80
            ++YR+ FY  L + + N + LL AL QI ++YT+F+ + H F+ L+DDC +ALTDNS  N
Sbjct  18   SGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGDN  77

Query  81   TLEHVLAVWGPVEEAALISAGMRSGHLPEALSQAMTLIGCRQRILMVSLRMMIYPlllvl  140
            +LEH LA W P EEAALISAGM SG+LPEAL++A  LI+CR+RI    +RM +YPL  + 
Sbjct  78   SLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCIA  137

Query  141  lmagllVITATELVPTLRNIADPENWQGVLAWLNGMATFF-EHAFLWCGVLLISFIVG-V  198
            +++G L +  T+L+PTL  ++DP+ W GVL+ LNG+  FF EH+ +  + L  +++V+  
Sbjct  138  MLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGL--ALLVAWT  195

Query  199  AYSLPRWV--NRLRRIADHFIPWSVYSDIQGAIFLLNMASLLRAQVQTLDALIILQRFAS  256
              SL+ W+  +RLRR+AD+ +PW+VYSDIQGAIFL+NM++LL A V+TL AL +++RFAS
Sbjct  196  RWSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFAS  255

Query  257  PWLQIRLESIADCVREGDHFGRALHHCGYDFPSKEAVNFLSLLTEGDGTSEMIGRYGERW  316
            PWL +RL+++ + V EG  FG AL++CGY FPSKEAVN+LS+++ GDG+++MI+R+G+ W
Sbjct  256  PWLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVS-GDGAAQMIARFGQEW  314

Query  317  LDQTIVRVNRRANLVMLCSLLLVVGAFMLILLAVMEIQSMANILP  361
            L++T+ RVNRR+  VML S++++ + + ++++AV+E  SM++ + 
Sbjct  315  LEETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTESMG  359

7) ECSE_P1-0111 in NC_011419


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 152/346 (44%), Positives = 250/346 (73%), Gaps = 1/346 (0%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLSLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKEQIHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D + +I+QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPELSKISSPDSWSGALGFLYGLSVFVDNYGAICSVLFAVITGLIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLPNWKSPDSVRTFADKIMPWSIYQDIQGATFLLNIAALLKAKMTTLNSLNILQEFASP  259
            WSL+NW  PD +R +AD+ +PW++Y DIQGA FL+N++ALL A + TL +L++++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  260  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELISNYGQRWLS  319
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  320  QTLQRVKKRANVIRLIMLIFLVMSLMLLVFAIMDIQSISDNSMGNF  365
            +T++RV++R+  + L+ ++ L   + ++V A+++  S+++ SMG++
Sbjct  317  ETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTE-SMGQY  361

8) YE3501 in NC_008800


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 156/315 (50%), Positives = 231/315 (74%), Gaps = 3/315 (0%)

Query  28   STRYRLQFYDALRFLLENGNPLGVALQMIAEVHTDFGKHWHPYGDLVDDCLESLSDNGAG  87
            ++ YRL+FY  L + + NG  L  AL+ I+++ TDFG++ H +G LVDDC  +L+DN+++
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  88   RTFENVLAAWGPLEEAALISAGMRSGKLPEALLQAGKLVEARRRILMLVSKMSLYPLLLF  147
             ++E+ LA W P EEAALISAGM SG+LPEAL +A  L++ RRRI   + +M++YPL  +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  148  CLGGGMLVINGAYLIPTLRKLSDPQDWSGALGFMHALANFTDRQGTAAVGAVAILIGLVL  207
             + GG L +  + LIPTL  +SDPQ W+G LG +++L  F   +G    +++A+L++   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  208  WSIPRW--RGRLRRLADNMVPWSVYQDIQGAVFLMNMAALLRANVQTLEALYILQPFSSP  265
            WS++ W   +RLRRLAD  VPW+VY DIQGA+FL+NM+ALL A V+TL AL +++ F+SP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  266  WLQERLDAIIAGVEQGDHLGKALRNSGYQFPSKEAANYLSLLTEGDGAPDIIGRYGDRWL  325
            WL  RL+A++  VE+G  +G ALR+ GY FPSKEA NYLS+++ GDGA+++I+R+G+ WL
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVS-GDGAAQMIARFGQEWL  315

Query  326  EQTLERVNKRVMVVM  340
            E+T+ RVN+R + VM
Sbjct  316  EETVKRVNRRGIAVM  330

9) SEEH1578_00595 in NC_021811


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  254 bits (947),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 153/346 (45%), Positives = 250/346 (73%), Gaps = 1/346 (0%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLSLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKEQIHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D + +I+QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPELSKISSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVITGLIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLPNWKSPDSVRTFADKIMPWSIYQDIQGATFllnmaallkakmTTLNSLNILQEFASP  259
            WSL+NW  PD +R +AD+ +PW++Y DIQGA FL+NM+ALL A + TL +L++++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  260  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELISNYGQRWLS  319
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  320  QTLQRVKKRANVIRLIMLIFLVMSLMLLVFAIMDIQSISDNSMGNF  365
            +T++RV++R+  + L+ ++ L   + ++V A+++  S+++ SMG++
Sbjct  317  ETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTE-SMGQY  361

10) CFSAN002069_23045 in NC_021813


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  254 bits (947),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 153/346 (45%), Positives = 250/346 (73%), Gaps = 1/346 (0%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLSLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKEQIHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D + +I+QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPELSKISSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVITGLIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLPNWKSPDSVRTFADKIMPWSIYQDIQGATFllnmaallkakmTTLNSLNILQEFASP  259
            WSL+NW  PD +R +AD+ +PW++Y DIQGA FL+NM+ALL A + TL +L++++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  260  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELISNYGQRWLS  319
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  320  QTLQRVKKRANVIRLIMLIFLVMSLMLLVFAIMDIQSISDNSMGNF  365
            +T++RV++R+  + L+ ++ L   + ++V A+++  S+++ SMG++
Sbjct  317  ETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTE-SMGQY  361

11) SeHA_A0113 in NC_011081


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  254 bits (947),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 153/346 (45%), Positives = 250/346 (73%), Gaps = 1/346 (0%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLSLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKEQIHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D + +I+QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPELSKISSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVITGLIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLPNWKSPDSVRTFADKIMPWSIYQDIQGATFllnmaallkakmTTLNSLNILQEFASP  259
            WSL+NW  PD +R +AD+ +PW++Y DIQGA FL+NM+ALL A + TL +L++++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  260  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELISNYGQRWLS  319
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  320  QTLQRVKKRANVIRLIMLIFLVMSLMLLVFAIMDIQSISDNSMGNF  365
            +T++RV++R+  + L+ ++ L   + ++V A+++  S+++ SMG++
Sbjct  317  ETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTE-SMGQY  361

12) pilR in NC_017718


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  254 bits (947),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 153/346 (45%), Positives = 250/346 (73%), Gaps = 1/346 (0%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLSLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKEQIHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D + +I+QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPELSKISSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVITGLIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLPNWKSPDSVRTFADKIMPWSIYQDIQGATFllnmaallkakmTTLNSLNILQEFASP  259
            WSL+NW  PD +R +AD+ +PW++Y DIQGA FL+NM+ALL A + TL +L++++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  260  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELISNYGQRWLS  319
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  320  QTLQRVKKRANVIRLIMLIFLVMSLMLLVFAIMDIQSISDNSMGNF  365
            +T++RV++R+  + L+ ++ L   + ++V A+++  S+++ SMG++
Sbjct  317  ETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTE-SMGQY  361

13) pilR in NC_017675


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  254 bits (947),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 153/346 (45%), Positives = 250/346 (73%), Gaps = 1/346 (0%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLSLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKEQIHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D + +I+QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPELSKISSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVITGLIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLPNWKSPDSVRTFADKIMPWSIYQDIQGATFllnmaallkakmTTLNSLNILQEFASP  259
            WSL+NW  PD +R +AD+ +PW++Y DIQGA FL+NM+ALL A + TL +L++++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  260  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELISNYGQRWLS  319
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  320  QTLQRVKKRANVIRLIMLIFLVMSLMLLVFAIMDIQSISDNSMGNF  365
            +T++RV++R+  + L+ ++ L   + ++V A+++  S+++ SMG++
Sbjct  317  ETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMTE-SMGQY  361

14) EKO11_4732 in NC_016904


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  229 bits (854),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 145/313 (47%), Positives = 224/313 (72%), Gaps = 4/313 (1%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLGLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKKQLHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D +++++QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPVLSKISSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVVTGVIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLKNW----KSRSLADNIMPWSIYKDIQGaafllnmaallkakmTTLNSLNVLQDFASP  255
            WSL NW    + R LAD  +PW++Y DIQGA FL+NM+ALL A + TL +L+V++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  256  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELIGNYGQRWLV  315
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  316  QTLERVKKRAAVV  328
            +T+ RV++R+  V
Sbjct  317  ETVKRVNRRGIAV  329

15) pilR in NC_017637


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  229 bits (854),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 145/313 (47%), Positives = 224/313 (72%), Gaps = 4/313 (1%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLGLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKKQLHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D +++++QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPVLSKISSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVVTGVIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLKNW----KSRSLADNIMPWSIYKDIQGaafllnmaallkakmTTLNSLNVLQDFASP  255
            WSL NW    + R LAD  +PW++Y DIQGA FL+NM+ALL A + TL +L+V++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  256  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELIGNYGQRWLV  315
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  316  QTLERVKKRAAVV  328
            +T+ RV++R+  V
Sbjct  317  ETVKRVNRRGIAV  329

16) WFL_23660 in NC_017665


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  229 bits (854),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 145/313 (47%), Positives = 224/313 (72%), Gaps = 4/313 (1%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLGLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKKQLHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D +++++QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPVLSKISSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVVTGVIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLKNW----KSRSLADNIMPWSIYKDIQGaafllnmaallkakmTTLNSLNVLQDFASP  255
            WSL NW    + R LAD  +PW++Y DIQGA FL+NM+ALL A + TL +L+V++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  256  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELIGNYGQRWLV  315
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  316  QTLERVKKRAAVV  328
            +T+ RV++R+  V
Sbjct  317  ETVKRVNRRGIAV  329

17) O3K_25697 in NC_018659


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  228 bits (851),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 145/313 (47%), Positives = 224/313 (72%), Gaps = 4/313 (1%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLGLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKKQLHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D +++++QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPVLSKISSPDSWSGALGFLYGLSLFVDNYGAICAVLFAVVTGVIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLKNW----KSRSLADNIMPWSIYKDIQGaafllnmaallkakmTTLNSLNVLQDFASP  255
            WSL NW    + R LAD  +PW++Y DIQGA FL+NM+ALL A + TL +L+V++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  256  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELIGNYGQRWLV  315
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  316  QTLERVKKRAAVV  328
            +T+ RV++R+  V
Sbjct  317  ETVKRVNRRGIAV  329

18) pilR in NC_017642


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  228 bits (851),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 145/313 (47%), Positives = 224/313 (72%), Gaps = 4/313 (1%)

Query  20   SAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGE  79
            ++ YR++FY  L + + N   L  ALEQ+ +  TDFG++ H F+ L  DC  +L +NSG+
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  80   NSLEYTLGLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKKQLHQAIWQMAIYPVGLL  139
            NSLE +L+ WVP EEAA+ISAG+ SG + +AL  A  L D +++++QAI +MA+YP+G +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  140  IMMTGTLYVLNTELIPVLSKISSPDSWSGALGFLYGLSLFVDNYGAICAVLFAVVTGVIS  199
             M+ GTL V++T+LIP L+ +S P++W+G LG L GL +F  + G + +  +A++ +   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  200  WSLKNW----KSRSLADNIMPWSIYKDIQGaafllnmaallkakmTTLNSLNVLQDFASP  255
            WSL NW    + R LAD  +PW++Y DIQGA FL+NM+ALL A + TL +L+V++ FASP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  256  WLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELIGNYGQRWLV  315
            WL  RL++++  V +G  +G+ALR+CGY FPS+EA N+LS++ GDGA+++I+ +GQ WL 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVSGDGAAQMIARFGQEWLE  316

Query  316  QTLERVKKRAAVV  328
            +T+ RV++R+  V
Sbjct  317  ETVKRVNRRGIAV  329

19) pilR in NC_016816


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  227 bits (847),  Expect = 7e-61, Method: Compositional matrix adjust.
 Identities = 147/335 (44%), Positives = 236/335 (71%), Gaps = 3/335 (0%)

Query  17   TGAHRQVFYENMRFLLENKKPLGISLKMIGDVHTSFGEKWHPYRELIEDCLEGLSDNTPG  76
            T++ R  FY  + + + N   L  +L  I+++ T FG++ H +  L++DC  +L+DN+ +
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  77   RTLSDVLAIWVPYEEAALISAGLRTGRIPVSLVQADKLIRARQRILNQVVFASVYPlvlv  136
             +L + LA WVP EEAALISAG+ +GR+P +L +A+ LI  R+RI + ++  +VYPL  +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  137  vlgggllgvnnlalvPMLSNISDPAGWTGALGFMKDLSDWTaqwgpaaaftgaaltmaSL  196
             + GG LGV +  L+P L+ +SDP  WTG LG +++L    ++ G   +   A L   + 
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  197  WSLPRW--RGRLRRLADNFLPWSLYKDLQGAVFLMNTGALLGAGVPELDALELLNSFAPP  254
            WSL+ W   +RLRRLAD  +PW++Y D+QGA+FL+N GALL AGV  L AL++++ FA+P
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  255  WLQERIEAAMDAMSEGNSLGMALRECGYDFPSREAVNYLSLLDDGKGSAEMISNYADRWL  314
            WL  R++A M+ + EG S+GMALRECGY FPS+EAVNYLS++  G G+A+MI+ +++ WL
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMV-SGDGAAQMIARFGQEWL  315

Query  315  EQTLKRVARRANTTKFFSMLMILGFFALIILMVMQ  349
            E+T+KRV RR+ +  +FSM+M++++++++++ V++
Sbjct  316  EETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIE  350

20) PAGR_g3869 in NC_017554


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  225 bits (840),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 154/343 (45%), Positives = 234/343 (69%), Gaps = 6/343 (1%)

Query  29   TGSHRQVFYENMRFLLENRKHLETSLKMIGEVHTSFGEKWHPFLELTEDCLEGLRDNSPG  88
            T++ R  FY  + + + N   L  +L  I+++ T FG++ H F  L +DC  +L DNS +
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  89   RTLADVLAVWVPYEEAALISAGMKTGNIPVALMQADKLINAREQIFGQVVFASVYPlvll  148
             +L + LA WVP EEAALISAGM +G +P AL +A+ LI+ R +I   ++  +VYPL  +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  149  vlgggllgvNNQSLVPMLSRMSDPASWSGALGFMKGLSDWTEQWGPaaafsgaalvvasl  208
             + GG LGV +  L+P L+ MSDP +W+G LG ++GL     + G   + + A LV  + 
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  209  WSLPRW--RGRIRRLADSIMPWSLYKDLQGAVFLMNTGALLGAGVHELEAMQLLHSFAPP  266
            WSL+ W   +R+RRLAD  +PW++Y D+QGA+FL+N GALL AGV+ L A+Q++H FA+P
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  267  WLQERLDAAMDEMSEGNSLGMALRKSGYDFPSREAVNYLSLLDDGDGAAELISNYADRWL  326
            WL  RL+A M+E+ EG S+GMALR  GY FPS+EAVNYLS++  GDGAA++I+ +++ WL
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMV-SGDGAAQMIARFGQEWL  315

Query  327  TQTLRRVARRANVTRLLSMLLIMGFFALIIMMVMQIQDSGSLN  369
             +T++RV RR+    L+SM+++   FALI ++V+ + ++ S+ 
Sbjct  316  EETVKRVNRRGIAVMLFSMVML---FALIGVVVVAVIEATSMT  355

21) Ser39006_1486 in NC_022268


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  223 bits (831),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 139/308 (46%), Positives = 217/308 (71%), Gaps = 3/308 (0%)

Query  42   YRQPFYETLRFLLENKKSFKEALSLIGEVHTDFGRRWHPYSELVEDCLEAIADNSAGHSL  101
            YR  FY  L + + N   + EAL  I+++ TDFG+R H ++ LV+DC  A++DNS+++SL
Sbjct  20   YRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGDNSL  79

Query  102  PDVLAAWVPREEAALISAGIRSGSVPRSLEQADKLIVARRRILGQVLMASVYPIlllflg  161
             + LA WVP EEAALISAG+ SG +P +L +A+ LI  RRRI   ++  +VYP+  + + 
Sbjct  80   EHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCIAML  139

Query  162  agllTVNNWLLIPTLSKLSSPDSWTGALGLMNHISAFTSAYGGITGLCCVAFIALVFWSL  221
            +G L V +  LIPTL+ +S P++WTG LG +N +  F +  G + G     ++A   WSL
Sbjct  140  GGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTRWSL  199

Query  222  PRW--RGSLRRFADRLMPWSIYKDLQGAVFLMNVSALLEAGVPHLDAVRILHDFGSPWLQ  279
            + W   + LRR+ADR +PW++Y D+QGA+FL+N++ALL AGV  L A++++H F+SPWL 
Sbjct  200  SNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASPWLV  259

Query  280  ERLEAVTDGINNGVGLGKSLRDCGYQFPSQEAANYLSILGQGDGASRLISNYANRWLEQV  339
             RL+AV + +++G ++G +LR+CGY FPS+EA NYLS+++ GDGA+++I+ +++ WLE+ 
Sbjct  260  VRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVS-GDGAAQMIARFGQEWLEET  318

Query  340  LGLVARRA  347
            +  V RR+
Sbjct  319  VKRVNRRG  326

22) pilR in NC_009708


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  222 bits (825),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 156/315 (50%), Positives = 227/315 (73%), Gaps = 3/315 (0%)

Query  25   SAHYRLEFYDALHFLLGNGHPLGAALRMIAEVHTDFGKLWHPYGDLVDDCLESLSDNSTG  84
            ++ YRL FY  L + + NG  L  AL  I+++ TDFG+  H +G LVDDC  +L+DNS +
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  85   RMLEDVLAAWGPLEEAALISAGMRSGKLPEALRQAGKLVEARRRILTLVgkmslypllll  144
              LE+ LA W P EEAALISAGM SG+LPEAL +A  L++ RRRI   + +M++YPL  +
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  145  slgsgmlgingmYLIPTLRKLSDPENWRGALGFMHAVANVTDKQSTvavgviailvglvl  204
            ++ +G LG+    LIPTL  +SDP+ W G LG ++++      ++ V  + +A+LV+   
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  205  WSIPRW--RGRLRRFADNIMPWSVYKDIQGAVFLMNMAALLRANVQTLEALQILLPFSSP  262
            WS++ W   +RLRR+AD  +PW+VY DIQGA+FL+NM+ALL A V+TL ALQ++  F+SP
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  263  WLQERLDAIIACIEQGDHLGKALRNSGYAFPSKEAANYLSLLTEGDGAPDIISRYGDRWL  322
            WL  RL+A++  +E+G  +G ALR+ GYAFPSKEA NYLS+++ GDGA+++I+R+G+ WL
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVS-GDGAAQMIARFGQEWL  315

Query  323  EQTLERVNKRVIGVM  337
            E+T+ RVN+R I+VM
Sbjct  316  EETVKRVNRRGIAVM  330

23) SPAB_05361 in NC_010102


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  220 bits (819),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 146/315 (47%), Positives = 213/315 (68%), Gaps = 3/315 (0%)

Query  29   TGKYRQPFYETLRFLLENRKALKDALTMIGDVHTDFGRRWHPYYELVQDCIEGVNDNRPG  88
            T+ YR  FY  L + + N   L +AL  I+++ TDFG+R H +  LV+DC  ++ DN  +
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  89   RALQDVLAAWAPYEEAALISAGMETGNIPAALMQADKLIVARRRILGQVIFASVFPAALA  148
             +L++ LA W P EEAALISAGM +G +P AL +A+ LI  RRRI   ++  +V+P +  
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  149  ILSTGLLLANNLALVPTMSKMSDPARWTGALGFMNGVAKWSSEWGVASAATAAGLVLLSF  208
             +  G L   +  L+PT++ MSDP  WTG LG +NG+    +E GV  +A  A LV  + 
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  209  WSLPRW--RGRLRRCADWLLPWSVYKDLQGAVFLMNIGALLGSGVQELKALQILNGFAPP  266
            WSL+ W   +RLRR AD+ +PW+VY D+QGA+FL+N+GALL +GV+ L ALQ+++ FA+P
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  267  WLQERIEAAMECMSEGDSLGRALRNSGYDFPSREAVNYLSLLDKGDGAASLITNYADRWR  326
            WL  R++A ME + EG S+G ALR+ GY FPS+EAVNYLS++  GDGAA +I+ +++ W 
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVS-GDGAAQMIARFGQEWL  315

Query  327  EQALARVARRANATK  341
            E+++ RV RR+ A  
Sbjct  316  EETVKRVNRRGIAVM  330

24) EJP617_06740 in NC_017445


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  219 bits (816),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 146/340 (43%), Positives = 230/340 (68%), Gaps = 3/340 (0%)

Query  29   SAQYRQPFYETLHFLLENRKALDEALHMIGNVHTDFGARWHPYHELVQDCLEGVSDNRPG  88
            ++ YR  FY  L + + N   L EAL+ I+N+ TDFG R H +  LV+DC  +++DN  +
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  89   RSVQDVLAVWAPREEAALIGAGMETGNIPRALLQANKLIVARQRILGQVIFASVYPavlg  148
             S+++ LA W P EEAALI+AGM +G +P AL +A+ LI  R+RI   ++  +VYP    
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  149  ilgagllgvnnlvlvPTMSRISDPARWSGALGMMNGLAQWTSAWGIAAAAVTGGLTVLTF  208
             + +G LGV +  L+PT++ +SDP  W+G LG +NGL    +  G+  +A  + L   T 
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  209  WSLPRW--RGRLRRYADRLMPWSVYKDLQGAVFLMNVGALLGAGVPELKTLRTLHGFAAP  266
            WSL+ W   +RLRR ADR +PW+VY D+QGA+FL+N+GALL AGV  L +L+ +H FA+P
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  267  WLQERIEAAMVCMSEGNSLGLALRNSGYDFPSREAVNYLSLLDEGERAGELISNYADRWL  326
            WL  R++A M  + EG S+G+ALR+ GY FPS+EAVNYLS++  G+ A+++I+ +++ WL
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVS-GDGAAQMIARFGQEWL  315

Query  327  EQALKRVARRANVTKLISLVLIMTFFLLMLQMVMQIQDIN  366
            E+++KRV RR+    L+S+V++ +++ +++  V++   + 
Sbjct  316  EETVKRVNRRGIAVMLFSMVMLFALIGVVVVAVIEATSMT  355

25) ECL_00420 in NC_014121


> NC_004631_P3|21|G18|29144503|NP_807845.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|+|21171..22256|pilR|t4246|hypothetical 
protein
Length=361

 Score =  204 bits (760),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 143/311 (46%), Positives = 210/311 (68%), Gaps = 3/311 (0%)

Query  29   TGQYRQPFYETLRFLLENRKALEEALAMIGEVHTDFGRRWHPYYELVQDCLEGVKDNREG  88
            T+ YR  FY  L + + N   L EAL  I+++ TDFG+R H +  LV+DC  ++ DN  +
Sbjct  17   TSGYRLRFYRMLSLQMRNGVKLLEALEQISNMYTDFGQRTHGFGFLVDDCRAALTDNSGD  76

Query  89   RSLKDVLAAWAPYEEAALISAGMETGNIPGALMQADKLIVARRLILGQVVFASVFPsala  148
             SL + LA W P EEAALISAGM +G +P AL +A+ LI  RR I   ++  +V+P +  
Sbjct  77   NSLEHALANWVPAEEAALISAGMFSGRLPEALAEAEILIDCRRRIRQAIMRMAVYPLGCI  136

Query  149  llsaglllannmalVPTLSKMSDPARWTGALGLMNGVAQWTDRWgvtaagatvggvILAF  208
             + +G L   +  L+PTL+ MSDP  WTG LG +NG+       GV  +++    V  + 
Sbjct  137  AMLGGTLGVIQTQLIPTLAGMSDPQTWTGVLGSLNGLLIFFTEHGVVMGAGLALLVAWTR  196

Query  209  WSLPRW--RGRLRRVADFLMPWSVYQDLQGAVFLMNIGALLGAGVQELKALQILNEFAPP  266
            WSL+ W   +RLRR+AD  +PW+VY D+QGA+FL+N+GALL AGV+ L ALQ+++ FA+P
Sbjct  197  WSLSNWIRPDRLRRLADRHVPWAVYSDIQGAIFLINMGALLCAGVRTLTALQVIHRFASP  256

Query  267  WLQERIEAAMECMSDGDSLGMALRQSGYDFPSREAVNYLSLLDKGNSAASLITNYADRWL  326
            WL  R++A ME + +G S+GMALR+ GY FPS+EAVNYLS++  G++AA +I+ +++ WL
Sbjct  257  WLVVRLNAVMEEVEEGASFGMALRECGYAFPSKEAVNYLSMVS-GDGAAQMIARFGQEWL  315

Query  327  EQALTRVARRA  337
            E+++ RV RR+
Sbjct  316  EETVKRVNRRG  326