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Homologs of VC0838 gene of NC_002505_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) O3Y_03900 in NC_016944


> NC_002505_P3|21|G19|15640855|NP_230486.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|26655..27485|-|VC0838|TCP 
pilus virulence 
regulatory protein
Length=276

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 276/276 (100%), Positives = 276/276 (100%), Gaps = 0/276 (0%)

Query  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEinsssiil  60
            MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL
Sbjct  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL  60

Query  61   lkknsiQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120
            LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE
Sbjct  61   LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120

Query  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180
            HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS
Sbjct  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180

Query  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240
            DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA
Sbjct  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240

Query  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276
            YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK
Sbjct  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276

2) VCM66_0795 in NC_012578


> NC_002505_P3|21|G19|15640855|NP_230486.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|26655..27485|-|VC0838|TCP 
pilus virulence 
regulatory protein
Length=276

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 276/276 (100%), Positives = 276/276 (100%), Gaps = 0/276 (0%)

Query  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEinsssiil  60
            MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL
Sbjct  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL  60

Query  61   lkknsiQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120
            LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE
Sbjct  61   LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120

Query  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180
            HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS
Sbjct  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180

Query  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240
            DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA
Sbjct  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240

Query  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276
            YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK
Sbjct  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276

3) VCD_003490 in NC_012668


> NC_002505_P3|21|G19|15640855|NP_230486.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|26655..27485|-|VC0838|TCP 
pilus virulence 
regulatory protein
Length=276

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 276/276 (100%), Positives = 276/276 (100%), Gaps = 0/276 (0%)

Query  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEinsssiil  60
            MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL
Sbjct  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL  60

Query  61   lkknsiQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120
            LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE
Sbjct  61   LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120

Query  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180
            HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS
Sbjct  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180

Query  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240
            DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA
Sbjct  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240

Query  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276
            YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK
Sbjct  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276

4) VC0838 in NC_002505


> NC_002505_P3|21|G19|15640855|NP_230486.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|26655..27485|-|VC0838|TCP 
pilus virulence 
regulatory protein
Length=276

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 276/276 (100%), Positives = 276/276 (100%), Gaps = 0/276 (0%)

Query  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEinsssiil  60
            MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL
Sbjct  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL  60

Query  61   lkknsiQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120
            LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE
Sbjct  61   LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120

Query  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180
            HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS
Sbjct  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180

Query  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240
            DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA
Sbjct  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240

Query  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276
            YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK
Sbjct  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276

5) VC395_0854 in NC_012582


> NC_002505_P3|21|G19|15640855|NP_230486.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|26655..27485|-|VC0838|TCP 
pilus virulence 
regulatory protein
Length=276

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 276/276 (100%), Positives = 276/276 (100%), Gaps = 0/276 (0%)

Query  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEinsssiil  60
            MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL
Sbjct  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL  60

Query  61   lkknsiQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120
            LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE
Sbjct  61   LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120

Query  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180
            HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS
Sbjct  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180

Query  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240
            DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA
Sbjct  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240

Query  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276
            YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK
Sbjct  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276

6) tcpN/toxT in NC_009457


> NC_002505_P3|21|G19|15640855|NP_230486.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|26655..27485|-|VC0838|TCP 
pilus virulence 
regulatory protein
Length=276

 Score =  409 bits (1540),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 276/276 (100%), Positives = 276/276 (100%), Gaps = 0/276 (0%)

Query  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEinsssiil  60
            MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL
Sbjct  1    MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL  60

Query  61   lkknsiQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120
            LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE
Sbjct  61   LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE  120

Query  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180
            HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS
Sbjct  121  HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS  180

Query  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240
            DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA
Sbjct  181  DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA  240

Query  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276
            YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK
Sbjct  241  YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK  276