Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type IV secretory pathway, VirB4 component |
NC_018080 (Pseudomonas aeruginosa DK2) |
0.0 |
100 |
|
type IV secretory pathway, VirB4 component |
NC_009656 (Pseudomonas aeruginosa PA7) |
0.0 |
99 |
|
type IV secretory pathway, VirB4 component |
NC_020912 (Pseudomonas aeruginosa B136-33) |
0.0 |
99 |
|
hypothetical protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
0.0 |
99 |
|
hypothetical protein |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
0.0 |
99 |
|
conjugal transfer protein |
NC_021577 (Pseudomonas aeruginosa RP73) |
0.0 |
98 |
|
conjugative transfer ATPase |
NC_004129 (Pseudomonas protegens Pf-5) |
0.0 |
74 |
|
hypothetical protein |
NC_007005 (Pseudomonas syringae B728a) |
0.0 |
69 |
|
lipoprotein |
NC_021149 (Azotobacter vinelandii CA) |
0.0 |
71 |
|
lipoprotein |
NC_021150 (Azotobacter vinelandii CA6) |
0.0 |
71 |
|
lipoprotein |
NC_012560 (Azotobacter vinelandii DJ) |
0.0 |
71 |
|
hypothetical protein |
NC_004578 (Pseudomonas syringae DC3000) |
0.0 |
68 |
|
hypothetical protein |
NC_008752 (Acidovorax citrulli AAC00-1) |
0.0 |
64 |
|
hypothetical protein |
NC_011662 (Thauera sp. MZ1T) |
0.0 |
64 |
|
AAA ATPase |
NC_011901 (Thioalkalivibrio sulfidophilus HL-EbGR7) |
0.0 |
62 |
|
hypothetical protein |
NC_013421 (Pectobacterium wasabiae WPP163) |
0.0 |
64 |
|
hypothetical protein |
NC_003919 (Xanthomonas axonopodis 306) |
0.0 |
63 |
|
hypothetical protein |
NC_020800 (Xanthomonas axonopodis Xac29-1) |
0.0 |
63 |
|
hypothetical protein |
NC_015740 (Pseudomonas stutzeri ATCC 17588) |
0.0 |
64 |
|
hypothetical protein |
NC_018828 (Bordetella parapertussis Bpp5) |
0.0 |
64 |
|
Type IV secretory pathway, VirB4 components |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
0.0 |
63 |
|
hypothetical protein |
NC_008344 (Nitrosomonas eutropha C91) |
0.0 |
62 |
|
hypothetical protein |
NC_015379 (Pseudomonas brassicacearum NFM421) |
0.0 |
63 |
|
hypothetical protein |
NC_015740 (Pseudomonas stutzeri ATCC 17588) |
0.0 |
63 |
|
Type IV secretory protein VirB4 component |
NC_017845 (Pectobacterium sp. SCC3193) |
0.0 |
63 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
0.0 |
63 |
|
hypothetical protein |
NC_009719 (Parvibaculum lavamentivorans DS-1) |
0.0 |
63 |
|
hypothetical protein |
NC_014910 (Alicycliphilus denitrificans BC) |
0.0 |
62 |
|
hypothetical protein |
NC_008782 (Acidovorax sp. JS42) |
0.0 |
63 |
|
hypothetical protein |
NC_007508 (Xanthomonas campestris 85-10) |
0.0 |
63 |
|
hypothetical protein |
NC_012691 (Tolumonas auensis DSM 9187) |
0.0 |
64 |
|
hypothetical protein |
NC_011770 (Pseudomonas aeruginosa LESB58) |
0.0 |
63 |
|
Type IV secretory pathway, VirB4 components |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
0.0 |
63 |
|
type IV secretory pathway, VirB4 components |
NC_017671 (Stenotrophomonas maltophilia D457) |
0.0 |
63 |
|
hypothetical protein |
NC_017958 (Tistrella mobilis KA081020-065) |
0.0 |
63 |
|
hypothetical protein |
NC_008782 (Acidovorax sp. JS42) |
0.0 |
62 |
|
hypothetical protein |
NC_012912 (Dickeya zeae Ech1591) |
0.0 |
63 |
|
conjugative transfer ATPase |
NC_015422 (Alicycliphilus denitrificans K601) |
0.0 |
64 |
|
Type IV secretory pathway, VirB4 components |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
0.0 |
63 |
|
hypothetical protein |
NC_018028 (Pseudomonas stutzeri CCUG 29243) |
0.0 |
63 |
|
type IV secretory pathway, VirB4 components |
NC_007973 (Cupriavidus metallidurans CH34) |
0.0 |
62 |
|
hypothetical protein |
NC_008825 (Methylibium petroleiphilum PM1) |
0.0 |
64 |
|
hypothetical protein |
NC_016147 (Pseudoxanthomonas spadix BD-a59) |
0.0 |
63 |
|
hypothetical protein |
NC_010688 (Xanthomonas campestris B100) |
0.0 |
62 |
|
Hypothetical Protein |
NC_020815 (Xanthomonas citri Aw12879) |
0.0 |
63 |
|
Type IV secretory pathway, VirB4 components |
NC_007086 (Xanthomonas campestris 8004) |
0.0 |
63 |
|
hypothetical protein |
NC_008782 (Acidovorax sp. JS42) |
0.0 |
64 |
|
type IV secretory pathway, VirB4 component |
NC_014640 (Achromobacter xylosoxidans A8) |
0.0 |
62 |
|
type IV secretory pathway, VirB4 component |
NC_018080 (Pseudomonas aeruginosa DK2) |
0.0 |
62 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
0.0 |
61 |
|
hypothetical protein |
NC_010002 (Delftia acidovorans SPH-1) |
0.0 |
61 |
|
hypothetical protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
0.0 |
61 |
|
hypothetical protein |
NC_017532 (Pseudomonas stutzeri DSM 4166) |
0.0 |
61 |
|
hypothetical protein |
NC_006513 (Aromatoleum aromaticum EbN1) |
0.0 |
64 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
0.0 |
62 |
|
conjugative transfer ATPase |
NC_015422 (Alicycliphilus denitrificans K601) |
0.0 |
63 |
|
hypothetical protein |
NC_009138 (Herminiimonas arsenicoxydans ) |
0.0 |
64 |
|
hypothetical protein |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
0.0 |
57 |
|
hypothetical protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
0.0 |
57 |
|
Type IV secretory pathway VirB4 components-like protein |
NC_018220 (Pseudomonas putida DOT-T1E) |
0.0 |
55 |
|
Type IV secretory pathway VirB4 components-like protein |
NC_009512 (Pseudomonas putida F1) |
0.0 |
55 |
|
type IV secretory pathway VirB4 components-like protein |
NC_015733 (Pseudomonas putida S16) |
0.0 |
57 |
|
hypothetical protein |
NC_017986 (Pseudomonas putida ND6) |
0.0 |
56 |
|
hypothetical protein |
NC_010501 (Pseudomonas putida W619) |
0.0 |
55 |
|
conjugal transfer protein |
NC_021491 (Pseudomonas putida H8234) |
0.0 |
57 |
|
protein VirB4 |
NC_016830 (Pseudomonas fluorescens F113) |
0.0 |
56 |
|
conjugal transfer protein |
NC_021491 (Pseudomonas putida H8234) |
0.0 |
56 |
|
Hypothetical Protein |
NC_020815 (Xanthomonas citri Aw12879) |
0.0 |
65 |
|
hypothetical protein |
NC_011993 (Escherichia coli LF82) |
0.0 |
51 |
|
hypothetical protein |
NC_017634 (Escherichia coli NRG 857C) |
0.0 |
51 |
|
hypothetical protein |
NC_016845 (Klebsiella pneumoniae HS11286) |
0.0 |
52 |
|
hypothetical protein |
NC_022082 (Klebsiella pneumoniae JM45) |
0.0 |
52 |
|
putative plasmid-related outer membrane ATPase |
NC_011745 (Escherichia coli ED1a) |
0.0 |
50 |
|
hypothetical protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
0.0 |
49 |
|
hypothetical protein |
NC_013892 (Xenorhabdus bovienii SS-2004) |
0.0 |
49 |
|
hypothetical protein |
NC_007146 (Haemophilus influenzae 86-028NP) |
0.0 |
49 |
|
conserved hypothetical protein p45 |
NC_017451 (Haemophilus influenzae R2866) |
0.0 |
49 |
|
hypothetical protein |
NC_016809 (Haemophilus influenzae 10810) |
0.0 |
49 |
|
hypothetical protein |
NC_015964 (Haemophilus parainfluenzae T3T1) |
0.0 |
49 |
|
hypothetical protein |
NC_013892 (Xenorhabdus bovienii SS-2004) |
0.0 |
48 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
0.0 |
50 |
|
hypothetical protein |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
0.0 |
49 |
|
conjugative transfer ATPase, PFL_4706 family |
NC_022268 (Serratia sp. ATCC 39006) |
0.0 |
49 |
|
putative plasmid-like protein |
NC_014121 (Enterobacter cloacae ATCC 13047) |
0.0 |
48 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
0.0 |
51 |
|
hypothetical protein |
NC_010519 (Haemophilus somnus 2336) |
0.0 |
50 |
|
TraC-like conjugative transfer ATPase |
NC_021082 (Mannheimia haemolytica M42548) |
0.0 |
50 |
|
conjugative transfer ATPase TraC-like, PFL family |
NC_016808 (Pasteurella multocida 36950) |
0.0 |
50 |
|
plasmid-related outer membrane ATPase |
NC_014304 (Erwinia billingiae Eb661) |
0.0 |
48 |
|
putative plasmid-like protein |
NC_017445 (Erwinia sp. Ejp617) |
0.0 |
48 |
|
plasmid-like protein |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
0.0 |
48 |
|
conjugal transfer protein |
NC_021818 (Salmonella enterica CFSAN002050) |
0.0 |
50 |
|
hypothetical protein |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
0.0 |
48 |
|
hypothetical protein |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
0.0 |
48 |
|
plasmid-like protein |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
0.0 |
48 |
|
hypothetical protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
0.0 |
49 |
|
conjugative transfer ATPase |
NC_015567 (Serratia plymuthica AS9) |
0.0 |
50 |
|
conjugative transfer ATPase |
NC_015566 (Serratia sp. AS12) |
0.0 |
50 |
|
conjugative transfer ATPase |
NC_017573 (Serratia sp. AS13) |
0.0 |
50 |
|
putative plasmid-like protein |
NC_009832 (Serratia proteamaculans 568) |
0.0 |
50 |
|
putative plasmid-like protein |
NC_016816 (Pantoea ananatis LMG 5342) |
0.0 |
48 |
|
putative plasmid-like protein |
NC_009832 (Serratia proteamaculans 568) |
0.0 |
50 |
|
Type IV secretory protein VirB4 component |
NC_017845 (Pectobacterium sp. SCC3193) |
0.0 |
49 |
|
hypothetical protein |
NC_012125 (Salmonella enterica RKS4594) |
0.0 |
49 |
|
conjugal transfer protein |
NC_021743 (Mannheimia haemolytica D153) |
0.0 |
50 |
|
conjugal transfer protein |
NC_021739 (Mannheimia haemolytica D174) |
0.0 |
50 |
|
conjugative transfer ATPase |
NC_021082 (Mannheimia haemolytica M42548) |
0.0 |
50 |
|
F pilus assembly Type-IV secretion system for plasmid transfer |
NC_020833 (Mannheimia haemolytica USDA-ARS-USMARC-183) |
0.0 |
50 |
|
conjugal transfer protein |
NC_021883 (Mannheimia haemolytica USMARC_2286) |
0.0 |
50 |
|
conjugative transfer ATPase |
NC_017554 (Pantoea ananatis PA13) |
0.0 |
49 |
|
putative plasmid-like protein |
NC_009832 (Serratia proteamaculans 568) |
0.0 |
49 |
|
hypothetical protein |
NC_008800 (Yersinia enterocolitica 8081) |
0.0 |
49 |
|
F pilus assembly Type-IV secretion system for plasmid transfer |
NC_020834 (Mannheimia haemolytica USDA-ARS-USMARC-185) |
0.0 |
50 |
|
hypothetical protein |
NC_010554 (Proteus mirabilis HI4320) |
0.0 |
50 |
|
hypothetical protein |
NC_014029 (Yersinia pestis Z176003) |
0.0 |
49 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
0.0 |
48 |
|
hypothetical protein |
NC_013421 (Pectobacterium wasabiae WPP163) |
0.0 |
49 |
|
hypothetical protein |
NC_012779 (Edwardsiella ictaluri 93-146) |
0.0 |
48 |
|
conjugative transfer ATPase |
NC_017531 (Pantoea ananatis AJ13355) |
0.0 |
48 |
|
plasmid-like protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
0.0 |
48 |
|
hypothetical protein |
NC_008309 (Haemophilus somnus 129PT) |
0.0 |
50 |
|
Type IV secretory pathway VirB4 component |
NC_021870 (Salmonella bongori N268-08) |
0.0 |
50 |
|
F pilus assembly Type-IV secretion system for plasmid transfer |
NC_015460 (Gallibacterium anatis UMN179) |
0.0 |
48 |
|
type IV secretory pathway, VirB4 component |
NC_018522 (Klebsiella pneumoniae 1084) |
0.0 |
50 |
|
hypothetical protein |
NC_012731 (Klebsiella pneumoniae NTUH-K2044) |
0.0 |
50 |
|
hypothetical protein |
NC_014532 (Halomonas elongata DSM 2581) |
0.0 |
44 |
|
hypothetical protein |
NC_005126 (Photorhabdus luminescens TTO1) |
0.0 |
48 |
|
type IV secretory pathway, VirB4 components |
NC_017856 (Methylophaga sp. JAM7) |
0.0 |
45 |
|
hypothetical protein |
NC_007484 (Nitrosococcus oceani ATCC 19707) |
0.0 |
44 |
|
conjugative transfer ATPase |
NC_015572 (Methylomonas methanica MC09) |
0.0 |
45 |
|
Conjugative transfer ATPase |
NC_018691 (Alcanivorax dieselolei B5) |
0.0 |
46 |
|
hypothetical protein |
NC_003198 (Salmonella enterica CT18) |
8e-175 |
50 |
|
hypothetical protein |
NC_021176 (Salmonella enterica Ty21a) |
2e-174 |
50 |
|
hypothetical protein |
NC_002940 (Haemophilus ducreyi 35000HP) |
3e-157 |
49 |
|
hypothetical protein |
NC_015554 (Alteromonas sp. SN2) |
3e-155 |
41 |
|
hypothetical protein |
NC_006513 (Aromatoleum aromaticum EbN1) |
1e-152 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='EF611301' AND ph.id_pai_orf='21' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc