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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AB096217

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAEMRSA15_18190
( - )

NC_017763
(Staphylococcus aureus HO 5096 0412)

2e-100

91.1

2) SERP1099
( - )

NC_002976
(Staphylococcus epidermidis RP62A)

8e-72

• Sequence Alignments

1) SAEMRSA15_18190 in NC_017763


>AB096217|21|G19|29539370|BAC67566.1|Staphylococcus_aureus_81/108(MR108)|+|18675..19031|-|-|hypothetical 
          Length = 357

 Score = 363 bits (936), Expect = 2e-100
 Identities = 213/236 (90%)
 Strand = Plus / Plus

Query: 49  atgaagaattataattgggaatactttaaagcccaaattaatcaaaagctttctgaacca 108
           |||||||||||||| |||||||| |||||| ||||||||||  |||||||||| ||||||
Sbjct: 1   atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 60

Query: 109 gaaacgaaaaaaatctatagtcaaagaaaaattgatgtagagcctgtttttggatttatg 168
           ||||| ||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 61  gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 120

Query: 169 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 228
           ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 121 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 180

Query: 229 ctaggttttgtattaatggcacttaatataaggaaaa-tagcagctcaacgagctg 283
           || ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 181 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 235


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 331 aatagaaatcagctttttt 349
           |||||||||   |||||||
Sbjct: 282 aatagaaattgtctttttt 300


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 314 atttctat 321
           ||||||||
Sbjct: 266 atttctat 273


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 288 ttataaaa 295
           ||||||||
Sbjct: 252 ttataaaa 259

2) SERP1099 in NC_002976


>AB096217|21|G19|29539370|BAC67566.1|Staphylococcus_aureus_81/108(MR108)|+|18675..19031|-|-|hypothetical 
          Length = 357

 Score = 268 bits (691), Expect = 8e-72
 Identities = 158/180 (88%)
 Strand = Plus / Plus

Query: 106 tttttggatttgtgaagtctattttgagtttcactcgaatgtccgttcgagagataaata 165
           ||||||||||| ||||| |||||||| |||||||||| ||||| || ||||   | ||||
Sbjct: 107 tttttggatttatgaaggctattttgggtttcactcggatgtctgtccgaggactcaata 166

Query: 166 aagccaaaagagaactagaatttgtactaatggcacttaatataagaaaagtaacagttc 225
           ||| |||||||||||| |  |||||| ||||||||||||||||||||||||||  || ||
Sbjct: 167 aagtcaaaagagaacttggttttgtattaatggcacttaatataagaaaagtagtagctc 226

Query: 226 aacgagctaaaaataatcaaaaaaattat-aaaaagacaatttctatattttttcaatag 284
           |||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||
Sbjct: 227 aacgagctgaaaataatcaaaaaatttataaaaaagacaatttctatattatttcaatag 286


 Score = 49 bits (127), Expect = 5e-06
 Identities = 35/41 (85%)
 Strand = Plus / Plus

Query: 1  atgaagaattttaaatggaaatattttataaaacccaaatt 41
          |||||||||| ||| ||| |||||||||  || ||||||||
Sbjct: 1  atgaagaattataactgggaatatttta--aatcccaaatt 39


 Score = 35 bits (89), Expect = 1e-01
 Identities = 18/18 (100%)
 Strand = Plus / Plus

Query: 73 atctacagtcaaagaaaa 90
          ||||||||||||||||||
Sbjct: 73 atctacagtcaaagaaaa 90


 Score = 19 bits (50), Expect = 5e+03
 Identities = 10/10 (100%)
 Strand = Plus / Plus

Query: 56 aacaaaaagc 65
          ||||||||||
Sbjct: 40 aacaaaaagc 49


 Score = 9 bits (24), Expect = 5e+06
 Identities = 5/5 (100%)
 Strand = Plus / Plus

Query: 66 aaaaa 70
          |||||
Sbjct: 67 aaaaa 71