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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AB038513

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SA2981_0057
( YP_005740807.1 )

truncated DNA repair protein RadC

NC_017340
(Staphylococcus aureus 04-02981)

5e-44

2) CA347_54
( YP_008126938.1 )

radC-like JAB domain protein

NC_021554
(Staphylococcus aureus CA-347)

5e-44

3) SaurJH1_0044
( YP_001315197.1 )

DNA repair protein RadC

NC_009632
(Staphylococcus aureus JH1)

5e-44

4) SaurJH9_0044
( YP_001245432.1 )

DNA repair protein RadC

NC_009487
(Staphylococcus aureus JH9)

5e-44

5) SAHV_0056
( YP_001440646.1 )

hypothetical protein

NC_009782
(Staphylococcus aureus Mu3)

5e-44

6) truncated-radC
( NP_370581.1 )

hypothetical protein

NC_002758
(Staphylococcus aureus Mu50)

5e-44

7) radC
( NP_373293.1 )

hypothetical protein

NC_002745
(Staphylococcus aureus N315)

5e-44

8) SERP2505
( YP_190047.1 )

RadC domain-containing protein

NC_002976
(Staphylococcus epidermidis RP62A)

5e-44

9) SAT0131_02873
( YP_005753911.1 )

hypothetical protein

NC_017347
(Staphylococcus aureus T0131)

7e-44

10) SABB_05344
( YP_008167204.1 )

hypothetical protein

NC_021670
(Staphylococcus aureus Bmb9393)

8e-44

11) SABB_01760
( YP_008167243.1 )

radC-like protein

NC_021670
(Staphylococcus aureus Bmb9393)

3e-35

12) SAT0131_00050
( YP_005751349.1 )

RadC domain protein

NC_017347
(Staphylococcus aureus T0131)

3e-35

13) SATW20_00870
( YP_005730110.1 )

DNA repair protein RadC (fragment)

NC_017331
(Staphylococcus aureus TW20)

3e-35

14) SAA6008_00053
( YP_005743451.1 )

hypothetical protein

NC_017341
(Staphylococcus aureus JKD6008)

1e-32

• Sequence Alignments

1) SA2981_0057 in NC_017340


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 103/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEI+RSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDVLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD+LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

2) CA347_54 in NC_021554


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 103/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEI+RSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDVLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD+LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

3) SaurJH1_0044 in NC_009632


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 103/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEI+RSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDVLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD+LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

4) SaurJH9_0044 in NC_009487


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 103/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEI+RSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDVLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD+LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

5) SAHV_0056 in NC_009782


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 103/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEI+RSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDVLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD+LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

6) truncated-radC in NC_002758


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 103/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEI+RSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDVLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD+LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

7) radC in NC_002745


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 103/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEI+RSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDVLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD+LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

8) SERP2505 in NC_002976


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 103/105 (99%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEI+RSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDVLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD+LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

9) SAT0131_02873 in NC_017347


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  169 bits (626),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 104/105 (99%), Positives = 104/105 (99%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDTLTIV  105
            QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD LTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

10) SABB_05344 in NC_021670


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  169 bits (625),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 104/105 (99%), Positives = 104/105 (99%), Gaps = 0/105 (0%)

Query  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60
            MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI
Sbjct  1    MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHI  60

Query  61   QILSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105
            Q LSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV
Sbjct  61   QTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

11) SABB_01760 in NC_021670


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  140 bits (516),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 76/104 (74%), Positives = 94/104 (91%), Gaps = 0/104 (0%)

Query  4    KRIDVVKVQMVKEDTLWYLKRRIEEPKDAADIMRDFIGNADREHFILICLNSKNEPTHIE  63
            K I++V +QM+K DTL YLK RI +P DAA+I+R FIGN+DREH+ILIC+NSKNEPTHI+
Sbjct  2    KEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHIQ  61

Query  64   TVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDILTIV  107
            T+SIG+IN +VIHPREIFKTAILSNA ++++GHNHPSGDILTIV
Sbjct  62   TLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

12) SAT0131_00050 in NC_017347


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  140 bits (516),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 76/104 (74%), Positives = 94/104 (91%), Gaps = 0/104 (0%)

Query  4    KRIDVVKVQMVKEDTLWYLKRRIEEPKDAADIMRDFIGNADREHFILICLNSKNEPTHIE  63
            K I++V +QM+K DTL YLK RI +P DAA+I+R FIGN+DREH+ILIC+NSKNEPTHI+
Sbjct  2    KEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHIQ  61

Query  64   TVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDILTIV  107
            T+SIG+IN +VIHPREIFKTAILSNA ++++GHNHPSGDILTIV
Sbjct  62   TLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

13) SATW20_00870 in NC_017331


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  140 bits (516),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 76/104 (74%), Positives = 94/104 (91%), Gaps = 0/104 (0%)

Query  4    KRIDVVKVQMVKEDTLWYLKRRIEEPKDAADIMRDFIGNADREHFILICLNSKNEPTHIE  63
            K I++V +QM+K DTL YLK RI +P DAA+I+R FIGN+DREH+ILIC+NSKNEPTHI+
Sbjct  2    KEINIVSLQMIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHIQ  61

Query  64   TVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDILTIV  107
            T+SIG+IN +VIHPREIFKTAILSNA ++++GHNHPSGDILTIV
Sbjct  62   TLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105

14) SAA6008_00053 in NC_017341


> AB038513|21|G19|27529893|BAC53830.1|Staphylococcus_aureus_85/2082|-|13133..13450|-|-|hypothetical 
protein
Length=105

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 72/95 (76%), Positives = 87/95 (92%), Gaps = 0/95 (0%)

Query  1    MVKEDTLWYLKRRIEEPKDAADIMRDFIGNADREHFILICLNSKNEPTHIETVSIGTINF  60
            M+K DTL YLK RI +P DAA+I+R FIGN+DREH+ILIC+NSKNEPTHI+T+SIG+IN 
Sbjct  11   MIKTDTLSYLKNRISNPEDAAEILRSFIGNSDREHLILICMNSKNEPTHIQTLSIGSINQ  70

Query  61   AVIHPREIFKTAILSNATGMIIGHNHPSGDILTIV  95
            +VIHPREIFKTAILSNA ++++GHNHPSGDILTIV
Sbjct  71   TVIHPREIFKTAILSNANSIMLGHNHPSGDILTIV  105