Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of HMPREF0351_12144 gene of NC_017960_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EFAU004_02146
( YP_005355348.1 )

helix-turn-helix domain-containing protein

NC_017022
(Enterococcus faecium Aus0004)

8e-95

100

2) HMPREF0351_12144
( YP_006376750.1 )

transcriptional regulator

NC_017960
(Enterococcus faecium DO)

8e-95

100

• Sequence Alignments

1) EFAU004_02146 in NC_017022


> NC_017960_P1|20|G20|389869327|YP_006376750.1|Enterococcus_faecium_DO|+|11781..12428|-|HMPREF0351_12144|transcriptional 
regulator
Length=215

 Score =  339 bits (1272),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 215/215 (100%), Positives = 215/215 (100%), Gaps = 0/215 (0%)

Query  1    MNGGENVARKKYPEAVETGQRIRLARIEKGLSMEQLGGKLSPPASKGAVSNWENGYNLPN  60
            MNGGENVARKKYPEAVETGQRIRLARIEKGLSMEQLGGKLSPPASKGAVSNWENGYNLPN
Sbjct  1    MNGGENVARKKYPEAVETGQRIRLARIEKGLSMEQLGGKLSPPASKGAVSNWENGYNLPN  60

Query  61   NTRLKQLSKVLDVSTTYLLNGSYTLRDMHMMPEIKRNVLEKQLKKTIEKNNSIIDSNLSN  120
            NTRLKQLSKVLDVSTTYLLNGSYTLRDMHMMPEIKRNVLEKQLKKTIEKNNSIIDSNLSN
Sbjct  61   NTRLKQLSKVLDVSTTYLLNGSYTLRDMHMMPEIKRNVLEKQLKKTIEKNNSIIDSNLSN  120

Query  121  AINNIEEDNLTVSQKIYLTNAIKYLKTGSRIEFPDGSTPIAYLAALLNTLLRYDSLINDS  180
            AINNIEEDNLTVSQKIYLTNAIKYLKTGSRIEFPDGSTPIAYLAALLNTLLRYDSLINDS
Sbjct  121  AINNIEEDNLTVSQKIYLTNAIKYLKTGSRIEFPDGSTPIAYLAALLNTLLRYDSLINDS  180

Query  181  EKNTDEKKEYQEFYENDLLKEFTALVTELNKHYSK  215
            EKNTDEKKEYQEFYENDLLKEFTALVTELNKHYSK
Sbjct  181  EKNTDEKKEYQEFYENDLLKEFTALVTELNKHYSK  215

2) HMPREF0351_12144 in NC_017960


> NC_017960_P1|20|G20|389869327|YP_006376750.1|Enterococcus_faecium_DO|+|11781..12428|-|HMPREF0351_12144|transcriptional 
regulator
Length=215

 Score =  339 bits (1272),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 215/215 (100%), Positives = 215/215 (100%), Gaps = 0/215 (0%)

Query  1    MNGGENVARKKYPEAVETGQRIRLARIEKGLSMEQLGGKLSPPASKGAVSNWENGYNLPN  60
            MNGGENVARKKYPEAVETGQRIRLARIEKGLSMEQLGGKLSPPASKGAVSNWENGYNLPN
Sbjct  1    MNGGENVARKKYPEAVETGQRIRLARIEKGLSMEQLGGKLSPPASKGAVSNWENGYNLPN  60

Query  61   NTRLKQLSKVLDVSTTYLLNGSYTLRDMHMMPEIKRNVLEKQLKKTIEKNNSIIDSNLSN  120
            NTRLKQLSKVLDVSTTYLLNGSYTLRDMHMMPEIKRNVLEKQLKKTIEKNNSIIDSNLSN
Sbjct  61   NTRLKQLSKVLDVSTTYLLNGSYTLRDMHMMPEIKRNVLEKQLKKTIEKNNSIIDSNLSN  120

Query  121  AINNIEEDNLTVSQKIYLTNAIKYLKTGSRIEFPDGSTPIAYLAALLNTLLRYDSLINDS  180
            AINNIEEDNLTVSQKIYLTNAIKYLKTGSRIEFPDGSTPIAYLAALLNTLLRYDSLINDS
Sbjct  121  AINNIEEDNLTVSQKIYLTNAIKYLKTGSRIEFPDGSTPIAYLAALLNTLLRYDSLINDS  180

Query  181  EKNTDEKKEYQEFYENDLLKEFTALVTELNKHYSK  215
            EKNTDEKKEYQEFYENDLLKEFTALVTELNKHYSK
Sbjct  181  EKNTDEKKEYQEFYENDLLKEFTALVTELNKHYSK  215