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PAthogenisity Island DataBase (PAI DB)

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Homologs of APECO1_3516 gene of NC_008563_P4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) APECO1_3516
( YP_854259.1 )

hypothetical protein

NC_008563
(Escherichia coli APEC O1)

2e-46

100

2) c5191
( NP_757039.1 )

hypothetical protein

NC_004431
(Escherichia coli CFT073)

4e-37

• Sequence Alignments

1) APECO1_3516 in NC_008563


> NC_008563_P4|20|G19|117625212|YP_854259.1|Escherichia_coli_APEC_O1|+|20321..20647|-|APECO1_3516|hypothetical 
protein
Length=108

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  1    MNVNVASTRGRAGFHNTSAGILHIASVPALQHVSCCCPPGFLDSLLHPLLHFTFVPAAAA  60
            MNVNVASTRGRAGFHNTSAGILHIASVPALQHVSCCCPPGFLDSLLHPLLHFTFVPAAAA
Sbjct  1    MNVNVASTRGRAGFHNTSAGILHIASVPALQHVSCCCPPGFLDSLLHPLLHFTFVPAAAA  60

Query  61   PQFDGFREMTFTDQLVKPFICHASETGDVVHVDQGIVGTQQYTVVACY  108
            PQFDGFREMTFTDQLVKPFICHASETGDVVHVDQGIVGTQQYTVVACY
Sbjct  61   PQFDGFREMTFTDQLVKPFICHASETGDVVHVDQGIVGTQQYTVVACY  108

2) c5191 in NC_004431


> NC_008563_P4|20|G19|117625212|YP_854259.1|Escherichia_coli_APEC_O1|+|20321..20647|-|APECO1_3516|hypothetical 
protein
Length=108

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 104/107 (98%), Positives = 106/107 (99%), Gaps = 0/107 (0%)

Query  1    MNVNVASTRGRAGFHNTSAGILHIASVLALQHVSCCCPPGFldsllhpllhlTFVPAAAA  60
            MNVNVASTRGRAGFHNTSAGILHIASV ALQHVSCCCPPGFLDSLLHPLLH+TFVPAAAA
Sbjct  1    MNVNVASTRGRAGFHNTSAGILHIASVPALQHVSCCCPPGFLDSLLHPLLHFTFVPAAAA  60

Query  61   PQFDGFREMTFTDQLVKPFICHASETGDVVHVDQGIVGTQQYAVVAC  107
            PQFDGFREMTFTDQLVKPFICHASETGDVVHVDQGIVGTQQY+VVAC
Sbjct  61   PQFDGFREMTFTDQLVKPFICHASETGDVVHVDQGIVGTQQYTVVAC  107