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Homologs of DIP0242 gene of NC_002935_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) DIP0242
( NP_938632.1 )

IS element transposase

NC_002935
(Corynebacterium diphtheriae NCTC13129)

4e-43

100

2) CDVA01_0145
( YP_005144054.1 )

transposase-like protein

NC_016790
(Corynebacterium diphtheriae VA01)

1e-29

3) CD31A_0235
( YP_005156946.1 )

transposase-like protein

NC_016799
(Corynebacterium diphtheriae 31A)

1e-29

4) CDBH8_0193
( YP_005159285.1 )

transposase-like protein

NC_016800
(Corynebacterium diphtheriae BH8)

1e-29

5) CDHC03_0166
( YP_005137215.1 )

transposase-like protein

NC_016787
(Corynebacterium diphtheriae HC03)

1e-29

6) CDC7B_0189
( YP_005161644.1 )

transposase-like protein

NC_016801
(Corynebacterium diphtheriae C7 (beta))

7e-28

7) AFE_1610
( YP_002426033.1 )

ISAfe7, transposase orfA

NC_011761
(Acidithiobacillus ferrooxidans ATCC 23270)

6e-10

8) Lferr_1427
( YP_002219866.1 )

transposase IS3/IS911 family protein

NC_011206
(Acidithiobacillus ferrooxidans ATCC 53993)

6e-10

• Sequence Alignments

1) DIP0242 in NC_002935


> NC_002935_P3|20|G17|38232865|NP_938632.1|Corynebacterium_diphtheriae_NCTC13129|-|16032..16343|-|DIP0242|IS 
element transposase
Length=103

 Score =  167 bits (618),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%)

Query  1    MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIES  60
            MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIES
Sbjct  1    MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIES  60

Query  61   DDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSLHFG  103
            DDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSLHFG
Sbjct  61   DDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSLHFG  103

2) CDVA01_0145 in NC_016790


> NC_002935_P3|20|G17|38232865|NP_938632.1|Corynebacterium_diphtheriae_NCTC13129|-|16032..16343|-|DIP0242|IS 
element transposase
Length=103

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 85/100 (85%), Gaps = 0/100 (0%)

Query  1   MVRTYSPAFREAAVRMMIKHQKEHHCSRWASTVAVSKEVGVSPNSIWNWFKKGALEAEEV  60
           MVRTYSPAFREAAVRMMI H+ E  CSRWA++VA+S  +G SPNSI  WFKK+++E+ E 
Sbjct  1   MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIES  60

Query  61  HEFDVAYYKEQIERLEAKVKRLEKTISFLRTTIAIFSSDV  100
           ++FD+AYYKE+IERLE+ ++RL+KTI FLRTTI I+S+ +
Sbjct  61  DDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSL  100

3) CD31A_0235 in NC_016799


> NC_002935_P3|20|G17|38232865|NP_938632.1|Corynebacterium_diphtheriae_NCTC13129|-|16032..16343|-|DIP0242|IS 
element transposase
Length=103

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 62/100 (62%), Positives = 87/100 (87%), Gaps = 0/100 (0%)

Query  1   MIRTYSPAFRETAVRMMIKHQKEHHCSRWASTVAVSQQVGVSPNSIWNWYKKGALEAEEV  60
           M+RTYSPAFRE+AVRMMI H+ E  CSRWA++VA+S+++G SPNSI  W+KK+++E+ E 
Sbjct  1   MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIES  60

Query  61  HEFDVAYYKEQIERLEAKVKRLEKTISFLRTTIAIFSSDV  100
           ++FD+AYYKE+IERLE+ ++RL+KTI FLRTTI I+S+ +
Sbjct  61  DDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSL  100

4) CDBH8_0193 in NC_016800


> NC_002935_P3|20|G17|38232865|NP_938632.1|Corynebacterium_diphtheriae_NCTC13129|-|16032..16343|-|DIP0242|IS 
element transposase
Length=103

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 62/100 (62%), Positives = 87/100 (87%), Gaps = 0/100 (0%)

Query  1   MIRTYSPAFRETAVRMMIKHQKEHHCSRWASTVAVSQQVGVSPNSIWNWYKKGALEAEEV  60
           M+RTYSPAFRE+AVRMMI H+ E  CSRWA++VA+S+++G SPNSI  W+KK+++E+ E 
Sbjct  1   MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIES  60

Query  61  HEFDVAYYKEQIERLEAKVKRLEKTISFLRTTIAIFSSDV  100
           ++FD+AYYKE+IERLE+ ++RL+KTI FLRTTI I+S+ +
Sbjct  61  DDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSL  100

5) CDHC03_0166 in NC_016787


> NC_002935_P3|20|G17|38232865|NP_938632.1|Corynebacterium_diphtheriae_NCTC13129|-|16032..16343|-|DIP0242|IS 
element transposase
Length=103

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 62/100 (62%), Positives = 87/100 (87%), Gaps = 0/100 (0%)

Query  1   MIRTYSPAFRETAVRMMIKHQKEHHCSRWASTVAVSQQVGVSPNSIWNWYKKGALEAEEV  60
           M+RTYSPAFRE+AVRMMI H+ E  CSRWA++VA+S+++G SPNSI  W+KK+++E+ E 
Sbjct  1   MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIES  60

Query  61  HEFDVAYYKEQIERLEAKVKRLEKTISFLRTTIAIFSSDV  100
           ++FD+AYYKE+IERLE+ ++RL+KTI FLRTTI I+S+ +
Sbjct  61  DDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSL  100

6) CDC7B_0189 in NC_016801


> NC_002935_P3|20|G17|38232865|NP_938632.1|Corynebacterium_diphtheriae_NCTC13129|-|16032..16343|-|DIP0242|IS 
element transposase
Length=103

 Score =  117 bits (426),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 62/101 (62%), Positives = 84/101 (84%), Gaps = 1/101 (0%)

Query  1    MVRTYSPEFKETAVRMMMIKHQKEHHCSRWASTVAVSKEVGVSPNSIWNWFKKGALEAEE  60
            MVRTYSP F+E+AVRMM I H+ E  CSRWA++VA+S  +G SPNSI  WFKK+++E+ E
Sbjct  1    MVRTYSPAFREAAVRMM-ISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIE  59

Query  61   VHEFDVAYYKEQIERLEAKVKRLEKTISFLRTTIAIFSSDV  101
             ++FD+AYYKE+IERLE+ ++RL+KTI FLRTTI I+S+ +
Sbjct  60   SDDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSL  100

7) AFE_1610 in NC_011761


> NC_002935_P3|20|G17|38232865|NP_938632.1|Corynebacterium_diphtheriae_NCTC13129|-|16032..16343|-|DIP0242|IS 
element transposase
Length=103

 Score = 57.6 bits (199),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 35/86 (41%), Positives = 51/86 (60%), Gaps = 2/86 (2%)

Query  9   YSPEVRERAVRMVQEHRGEYS-SPWAAVESIAPKIGCSPHTLHEWVKRHEVDTGLRDGVT  67
           YSP  RE AVRM+  HR EY  S WAA  +I+ KIG SP+++  W K+   +T   D+  
Sbjct  5   YSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIESDDFD  64

Query  68  SEEC-ERIKALEREVKELRRANEILK  92
                ERI  LE E++ L+++  +L+
Sbjct  65  LAYYKERIERLESEIQRLQKTIKFLR  90

8) Lferr_1427 in NC_011206


> NC_002935_P3|20|G17|38232865|NP_938632.1|Corynebacterium_diphtheriae_NCTC13129|-|16032..16343|-|DIP0242|IS 
element transposase
Length=103

 Score = 57.6 bits (199),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 35/86 (41%), Positives = 51/86 (60%), Gaps = 2/86 (2%)

Query  9   YSPEVRERAVRMVQEHRGEYS-SPWAAVESIAPKIGCSPHTLHEWVKRHEVDTGLRDGVT  67
           YSP  RE AVRM+  HR EY  S WAA  +I+ KIG SP+++  W K+   +T   D+  
Sbjct  5   YSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNSIYAWFKKSTFETIESDDFD  64

Query  68  SEEC-ERIKALEREVKELRRANEILK  92
                ERI  LE E++ L+++  +L+
Sbjct  65  LAYYKERIERLESEIQRLQKTIKFLR  90