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Homologs of tcpF gene of AF325734

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) VCD_003491 in NC_012668


> AF325734|20|G20|13377559|AAK20794.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|25655..26671|tcpF|-|toxin-coregulated 
pilus 
biosynthesis protein F
Length=338

 Score =  543 bits (2048),  Expect = 5e-156, Method: Compositional matrix adjust.
 Identities = 338/338 (100%), Positives = 338/338 (100%), Gaps = 0/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS
Sbjct  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL
Sbjct  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT
Sbjct  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK
Sbjct  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY
Sbjct  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK
Sbjct  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338

2) Vch1786_I0343 in NC_016445


> AF325734|20|G20|13377559|AAK20794.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|25655..26671|tcpF|-|toxin-coregulated 
pilus 
biosynthesis protein F
Length=338

 Score =  543 bits (2048),  Expect = 5e-156, Method: Compositional matrix adjust.
 Identities = 338/338 (100%), Positives = 338/338 (100%), Gaps = 0/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS
Sbjct  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL
Sbjct  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT
Sbjct  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK
Sbjct  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY
Sbjct  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK
Sbjct  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338

3) VC0837 in NC_002505


> AF325734|20|G20|13377559|AAK20794.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|25655..26671|tcpF|-|toxin-coregulated 
pilus 
biosynthesis protein F
Length=338

 Score =  543 bits (2048),  Expect = 5e-156, Method: Compositional matrix adjust.
 Identities = 338/338 (100%), Positives = 338/338 (100%), Gaps = 0/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS
Sbjct  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL
Sbjct  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT
Sbjct  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK
Sbjct  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY
Sbjct  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK
Sbjct  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338

4) tcpF in NC_012582


> AF325734|20|G20|13377559|AAK20794.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|25655..26671|tcpF|-|toxin-coregulated 
pilus 
biosynthesis protein F
Length=338

 Score =  542 bits (2044),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 336/338 (99%), Positives = 337/338 (99%), Gaps = 0/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS
Sbjct  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL
Sbjct  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT
Sbjct  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSK  240
            PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDV+ELSK
Sbjct  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSNNLTGKKLYNVSTNDMHNGY  300
            HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPS NLTGKKLYNVSTNDMHNGY
Sbjct  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK
Sbjct  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338

5) tcpF in NC_009457


> AF325734|20|G20|13377559|AAK20794.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|25655..26671|tcpF|-|toxin-coregulated 
pilus 
biosynthesis protein F
Length=338

 Score =  542 bits (2044),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 336/338 (99%), Positives = 337/338 (99%), Gaps = 0/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS
Sbjct  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL
Sbjct  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT
Sbjct  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSK  240
            PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDV+ELSK
Sbjct  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSNNLTGKKLYNVSTNDMHNGY  300
            HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPS NLTGKKLYNVSTNDMHNGY
Sbjct  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK
Sbjct  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338

6) O3Y_03895 in NC_016944


> AF325734|20|G20|13377559|AAK20794.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|25655..26671|tcpF|-|toxin-coregulated 
pilus 
biosynthesis protein F
Length=338

 Score =  541 bits (2043),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 337/338 (99%), Positives = 338/338 (100%), Gaps = 0/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS
Sbjct  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL
Sbjct  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT
Sbjct  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK
Sbjct  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDVHNGY  300
            HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTND+HNGY
Sbjct  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK
Sbjct  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338

7) tcpF in NC_012578


> AF325734|20|G20|13377559|AAK20794.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|25655..26671|tcpF|-|toxin-coregulated 
pilus 
biosynthesis protein F
Length=338

 Score =  541 bits (2043),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 337/338 (99%), Positives = 338/338 (100%), Gaps = 0/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS
Sbjct  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL
Sbjct  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT
Sbjct  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK
Sbjct  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSDNLTGKKLYNVSTNDMHNGY  300
            HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPS+NLTGKKLYNVSTNDMHNGY
Sbjct  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK
Sbjct  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338