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Homologs of unnamed gene of AF200692

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) unnamed
( - )

NC_017626
(Escherichia coli 042)

0.0

96.3

2) E2348C_1108
( - )

NC_011601
(Escherichia coli E2348/69)

0.0

95.3

3) P12B_c2100
( - )

NC_017663
(Escherichia coli P12b)

0.0

94.7

4) EC55989_2251
( - )

NC_011748
(Escherichia coli 55989)

0.0

96.6

5) ECO103_2471
( - )

NC_013353
(Escherichia coli 12009)

0.0

93.9

• Sequence Alignments

1) unnamed in NC_017626


>AF200692|20|G20|12643221|AAK00473.1|Shigella_flexneri_2a_YSH6000T|+|34717..35589|-|-|unknown 
          Length = 873

 Score = 1620 bits (4179), Expect = 0.0
 Identities = 841/873 (96%)
 Strand = Plus / Plus

Query: 34  atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactcg 93
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1   atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 60

Query: 94  ctttcccgtcacatcctggaacatctgcgcaaactcacccgtcacgaacccgtgattggc 153
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 61  ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgattggc 120

Query: 154 attatgggtaaaagcggggccggtaaatcctcactctgtaatgcactgtttcagggggag 213
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 attatgggtaaaagcggggccggtaaatcttcactctgtaatgcactgtttcagggggag 180

Query: 214 gtcaccccggtcagtgatgttcacgccggcacccgggaagtacggcgcttccgtctgagt 273
           ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 181 gtcacaccggtcagtgatgttcacgccggcacccgggaagtgcagcgcttccgtctgagt 240

Query: 274 ggccacggtcacagcatggttatcactgacctgcccggggtgggcgagagccgggacagg 333
           || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 ggtcacggtcacagcatggttatcactgacctgcccgaggtgggcgagagccgggacagg 300

Query: 334 gatgcagagtatgaggccctgtaccgtgacattctgcctgaacttgacctggtactgtgg 393
           |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 301 gatgcagagtatgaagccctgtaccgtgacattctgcctgaactggacctggtgctgtgg 360

Query: 394 ctgattaaagccgatgaccgtgccctgtctgtggatgagtatttctggcgacacatcctg 453
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgattaaagccgatgaccgggccctgtctgtggatgagtatttctggcgacacatcctg 420

Query: 454 caccggggacatcagcgggtactgtttgtggtgacgcaggccgacaaaacggagccctgc 513
           ||  | |||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 421 cagtgcggacatcagcaggtgctgtttgtggtgacgcaggctgacaaaacggaaccctgc 480

Query: 514 catgaatgggatatggccggtattcagccttctcctgcacaggcacagaatattcgcgaa 573
           ||||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||| || 
Sbjct: 481 catgaatgggatatggcaggtattcagccttctcccgcacaggaacagaacattcgtgag 540

Query: 574 aaaacggaggcggtattccgtctgttccggcccgtacatccggttgtggccgtatcggcc 633
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 aaaacggaggcggtattccgtctgttccggcccgtacatccggttgttgccgtatcggcc 600

Query: 634 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcgcttcccgaccat 693
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcgcttcccgaccat 660

Query: 694 gccgccagtcccctgatgacccgactgcaggacgagctgcgcacggaatctgtccgcgct 753
           |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 661 gccgccagccccctgatgacccgactgcaggacgagctgcgcacggagtctgtccgctct 720

Query: 754 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacagcggagagcgtc 813
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacagcggagagcgtc 780

Query: 814 tgtgttgcctctgttgtccgtacggccctgcgcgctgttcgtgacacggtggtctctgtt 873
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 781 tgtgttgcctctgttgtccgtacggccctgcgcgctgttcgtgacaccgtggtctctgtt 840

Query: 874 gcccgtgcggtatggaactggattttcttctga 906
           ||||| ||||||||||||||||| |||||||||
Sbjct: 841 gcccgcgcggtatggaactggatcttcttctga 873

2) E2348C_1108 in NC_011601


>AF200692|20|G20|12643221|AAK00473.1|Shigella_flexneri_2a_YSH6000T|+|34717..35589|-|-|unknown 
          Length = 873

 Score = 1580 bits (4076), Expect = 0.0
 Identities = 831/873 (95%)
 Strand = Plus / Plus

Query: 1   atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 60

Query: 61  ctttcccgtcacatcctggaacatctgcgcaaactcaccagccacgaacccgtgattggc 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61  ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgattggc 120

Query: 121 attatggg-aaaagcggggccggtaaatcctcactctgtaatgcgctgtttcagggagag 179
           |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 121 attatgggtaaaagcggggccggtaaatcttcactctgtaatgcactgtttcagggggag 180

Query: 180 gtcaccccggtcagtgatgttcacgccggcacccgggaagtgcggcgcttccgtctgagt 239
           ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 gtcacaccggtcagtgatgttcacgccggcacccgggaagtgcagcgcttccgtctgagt 240

Query: 240 ggtcacggtcaccgcatggttatcactgacctgtccggggtgggcgagagccgggacagg 299
           |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 241 ggtcacggtcacagcatggttatcactgacctgcccgaggtgggcgagagccgggacagg 300

Query: 300 gatgcagagtatgaagccctgtaccgtgacattctgcctgaacttgacctggtactgtgg 359
           |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 301 gatgcagagtatgaagccctgtaccgtgacattctgcctgaactggacctggtgctgtgg 360

Query: 360 ctgattaaagccgatgaccgtgccctgtctgtggatgagtatttctggcgacacatactg 419
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 ctgattaaagccgatgaccgggccctgtctgtggatgagtatttctggcgacacatcctg 420

Query: 420 caccggggacatcagcaggtgctgtttgtggtgacgcaggccgacaaaacagagccctgc 479
           ||  | ||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 421 cagtgcggacatcagcaggtgctgtttgtggtgacgcaggctgacaaaacggaaccctgc 480

Query: 480 catgaatgggatatggcaggtattcagccttctcccgcacaggcacagaatattcgcgaa 539
           ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || 
Sbjct: 481 catgaatgggatatggcaggtattcagccttctcccgcacaggaacagaacattcgtgag 540

Query: 540 aaaacggaggcggtattccgtctgttccggcccgtacatccggttgttgccgtatcggcc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaacggaggcggtattccgtctgttccggcccgtacatccggttgttgccgtatcggcc 600

Query: 600 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcgcttcccgaccat 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcgcttcccgaccat 660

Query: 660 gccgtcagtcccctgatgacccgcctgcaggacgagctgcgcacggaatctgtccggggt 719
           |||| ||| |||||||||||||| ||||||||||||||||||||||| ||||||||   |
Sbjct: 661 gccgccagccccctgatgacccgactgcaggacgagctgcgcacggagtctgtccgctct 720

Query: 720 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacggcggagagcgtc 779
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 721 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacagcggagagcgtc 780

Query: 780 tgtgttgcctctgttgcccgtacggttctgcgtgccgtccgtgacacggtggtctctgtt 839
           |||||||||||||||| ||||||||  ||||| || || |||||||| ||||||||||||
Sbjct: 781 tgtgttgcctctgttgtccgtacggccctgcgcgctgttcgtgacaccgtggtctctgtt 840

Query: 840 gcccgcgctgtatggaactggattttctcctga 872
           |||||||| |||||||||||||| |||| ||||
Sbjct: 841 gcccgcgcggtatggaactggatcttcttctga 873

3) P12B_c2100 in NC_017663


>AF200692|20|G20|12643221|AAK00473.1|Shigella_flexneri_2a_YSH6000T|+|34717..35589|-|-|unknown 
          Length = 873

 Score = 1564 bits (4037), Expect = 0.0
 Identities = 826/873 (95%)
 Strand = Plus / Plus

Query: 1   atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 60

Query: 61  ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgcctggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 61  ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgattggc 120

Query: 121 attatgggtaaaagcggg-cccgtaaatcctcactctgtaatgcgctgtttcagggggag 179
           |||||||||||||||||| || ||||||| |||||||||||||| |||||||||||||||
Sbjct: 121 attatgggtaaaagcggggccggtaaatcttcactctgtaatgcactgtttcagggggag 180

Query: 180 gtcaccccggtcagtgatgttcacgccggcacccgggaagtgcagcgcttccgtctgaat 239
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 gtcacaccggtcagtgatgttcacgccggcacccgggaagtgcagcgcttccgtctgagt 240

Query: 240 ggccatggtcacagcatggttatcactgacctgcccggggtgggcgagagccgggacagg 299
           || || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 ggtcacggtcacagcatggttatcactgacctgcccgaggtgggcgagagccgggacagg 300

Query: 300 gatgcagagtatgaagccctgtaccgtgacattctgctcgaactggacctggtactgtgg 359
           |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||
Sbjct: 301 gatgcagagtatgaagccctgtaccgtgacattctgcctgaactggacctggtgctgtgg 360

Query: 360 ctgattaaagccgatgaccgtgccctgtctgtggatgagtatttctggcgacacatcctg 419
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgattaaagccgatgaccgggccctgtctgtggatgagtatttctggcgacacatcctg 420

Query: 420 caccggggacatcagcgggtactgtttgtggtgatgcaggccgataaaacggagccctgc 479
           ||  | |||||||||| ||| ||||||||||||| |||||| || |||||||| ||||||
Sbjct: 421 cagtgcggacatcagcaggtgctgtttgtggtgacgcaggctgacaaaacggaaccctgc 480

Query: 480 catgaatgggatatggccggtattcagccttctcccgcagaggcacagaacattcgcgaa 539
           ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| || 
Sbjct: 481 catgaatgggatatggcaggtattcagccttctcccgcacaggaacagaacattcgtgag 540

Query: 540 aaaacggaggcggtattccgtctgttccggcccgtacatcgggttgttgccgtatcggcc 599
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 aaaacggaggcggtattccgtctgttccggcccgtacatccggttgttgccgtatcggcc 600

Query: 600 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcacttcccgaccat 659
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 601 cgcaccggctgggaactggatacgctggtcagtgcgctcatgacagcgcttcccgaccat 660

Query: 660 gccgccagtcccctgatgacccgcctgcaggacgagctgcgcacggagtctgtccggtct 719
           |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 661 gccgccagccccctgatgacccgactgcaggacgagctgcgcacggagtctgtccgctct 720

Query: 720 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacggcggagagcgtc 779
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 721 caggcccgtgaacagtttaccggtgcggtggaccggatatttgacacagcggagagcgtc 780

Query: 780 tgcattgcctctgttgcacgcacggttctgcgcgccgtccgtgactcggtggtctctgtt 839
           ||  ||||||||||||  || ||||  |||||||| || |||||| | ||||||||||||
Sbjct: 781 tgtgttgcctctgttgtccgtacggccctgcgcgctgttcgtgacaccgtggtctctgtt 840

Query: 840 gcccgcgcggtatggaactggattttcttctga 872
           ||||||||||||||||||||||| |||||||||
Sbjct: 841 gcccgcgcggtatggaactggatcttcttctga 873

4) EC55989_2251 in NC_011748


>AF200692|20|G20|12643221|AAK00473.1|Shigella_flexneri_2a_YSH6000T|+|34717..35589|-|-|unknown 
          Length = 873

 Score = 1184 bits (3057), Expect = 0.0
 Identities = 620/643 (96%)
 Strand = Plus / Plus

Query: 40  atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 99
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaatccgtctgatgccattgaggcaattgaaaaaccgctctcctccctgccttactca 60

Query: 100 ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgattggc 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctttcccgtcacatcctggaacatctgcgcaaactcaccagtcacgaacccgtgattggc 120

Query: 160 attatgggtaaaagcggggccggtaaatcctcactctgtaatgcactgtttcagggggag 219
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 attatgggtaaaagcggggccggtaaatcttcactctgtaatgcactgtttcagggggag 180

Query: 220 gtcaccccggtcagtgatgttcacgccggcccccgggaagtgcggcgcttccgtctgagt 279
           ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 181 gtcacaccggtcagtgatgttcacgccggcacccgggaagtgcagcgcttccgtctgagt 240

Query: 280 ggccacggtcacagcatggttatcactgacctgcccggggtgggcgagagccgggacagg 339
           || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 ggtcacggtcacagcatggttatcactgacctgcccgaggtgggcgagagccgggacagg 300

Query: 340 gatgcagagtatgaagccctgtaccgtgacattctgcccgaactggacctggtgctgtgg 399
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 gatgcagagtatgaagccctgtaccgtgacattctgcctgaactggacctggtgctgtgg 360

Query: 400 ctgattaaagccgatgaccgtgccctgtctgtggatgagtatttctggcgacacatcctg 459
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgattaaagccgatgaccgggccctgtctgtggatgagtatttctggcgacacatcctg 420

Query: 460 caccggggacatcagcgggtactgtttgtggtgatgcaggccgataaaacggagccctgc 519
           ||  | |||||||||| ||| ||||||||||||| |||||| || |||||||| ||||||
Sbjct: 421 cagtgcggacatcagcaggtgctgtttgtggtgacgcaggctgacaaaacggaaccctgc 480

Query: 520 catgaatgggatatggccggtattcagccttctcccgcacaggcacagaacattcgcgaa 579
           ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || 
Sbjct: 481 catgaatgggatatggcaggtattcagccttctcccgcacaggaacagaacattcgtgag 540

Query: 580 aaaacgga-gcggtattccgtctgttccggcccgtacatcgggttgttgccgtatcggcc 638
           |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 aaaacggaggcggtattccgtctgttccggcccgtacatccggttgttgccgtatcggcc 600

Query: 639 cgcaccggctgggaactggatacgctggtcagtgcgctcatga 681
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgcaccggctgggaactggatacgctggtcagtgcgctcatga 643

5) ECO103_2471 in NC_013353


>AF200692|20|G20|12643221|AAK00473.1|Shigella_flexneri_2a_YSH6000T|+|34717..35589|-|-|unknown 
          Length = 873

 Score = 1166 bits (3008), Expect = 0.0
 Identities = 614/654 (94%)
 Strand = Plus / Plus

Query: 1   gtgcagcgcttccgtctgaatggccatggtcacagcatggttatcactgacctgcccggg 60
           ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |
Sbjct: 220 gtgcagcgcttccgtctgagtggtcacggtcacagcatggttatcactgacctgcccgag 279

Query: 61  gtgggcgagagccgggacagggatgcagagtatgaagccctgtaccgtgacattctgctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 280 gtgggcgagagccgggacagggatgcagagtatgaagccctgtaccgtgacattctgcct 339

Query: 121 gaactggacctggtactgtggctgattaaagccgatgaccgtgccctgtctgtggatgag 180
           |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 340 gaactggacctggtgctgtggctgattaaagccgatgaccgggccctgtctgtggatgag 399

Query: 181 tatttctggcgacacatcctgcaccggggacatcagcgggtactgtttgtggtgatgcag 240
           |||||||||||||||||||||||  | |||||||||| ||| ||||||||||||| ||||
Sbjct: 400 tatttctggcgacacatcctgcagtgcggacatcagcaggtgctgtttgtggtgacgcag 459

Query: 241 gccgataaaacggagccctgccatgaatgggatatggccggtattcagccttctcccgca 300
           || || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 460 gctgacaaaacggaaccctgccatgaatgggatatggcaggtattcagccttctcccgca 519

Query: 301 gaggcacagaacattcgcgaaaaaacggaggcggtattccgtctgttccggcccgtacat 360
            ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 520 caggaacagaacattcgtgagaaaacggaggcggtattccgtctgttccggcccgtacat 579

Query: 361 cgggttgttgccgtatcggcccgcaccggctgggaactggatacgctggtcagtgcgctc 420
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ccggttgttgccgtatcggcccgcaccggctgggaactggatacgctggtcagtgcgctc 639

Query: 421 atgacagcacttcccgaccatgccgccagtcccctgatgacccgcctgcaggacgagctg 480
           |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 640 atgacagcgcttcccgaccatgccgccagccccctgatgacccgactgcaggacgagctg 699

Query: 481 cgcacggagtctgtccggtctcaggcccgtgaacagtttaccggtgcggtggaccggata 540
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cgcacggagtctgtccgctctcaggcccgtgaacagtttaccggtgcggtggaccggata 759

Query: 541 tttgacacggcggagagcgtctgcattgcctctgttgcacgcacggttctgcgcgccgtc 600
           |||||||| ||||||||||||||  ||||||||||||  || ||||  |||||||| || 
Sbjct: 760 tttgacacagcggagagcgtctgtgttgcctctgttgtccgtacggccctgcgcgctgtt 819

Query: 601 cgtgactcggtggtctctgttgcccgcgcggtatggaactggattttcttctga 654
           |||||| | ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 820 cgtgacaccgtggtctctgttgcccgcgcggtatggaactggatcttcttctga 873