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Homologs of tnpA gene of U60177

25

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HP0437
( NP_207235.1 )

IS605 transposase (tnpA)

NC_000915
(Helicobacter pylori 26695)

1e-57

98

2) HP0988
( NP_207779.1 )

IS605 transposase (tnpA)

NC_000915
(Helicobacter pylori 26695)

1e-57

98

3) HP0998
( NP_207789.1 )

IS605 transposase (tnpA)

NC_000915
(Helicobacter pylori 26695)

1e-57

98

4) HP1096
( NP_207887.1 )

IS605 transposase (tnpA)

NC_000915
(Helicobacter pylori 26695)

1e-57

98

5) HP1535
( NP_208326.1 )

IS605 transposase (tnpA)

NC_000915
(Helicobacter pylori 26695)

1e-57

98

6) C694_02220
( YP_006934359.1 )

IS605 transposase (tnpA)

NC_018939
(Helicobacter pylori 26695)

1e-57

98

7) C694_05100
( YP_006934906.1 )

IS605 transposase (tnpA)

NC_018939
(Helicobacter pylori 26695)

1e-57

98

8) C694_05150
( YP_006934914.1 )

IS605 transposase (tnpA)

NC_018939
(Helicobacter pylori 26695)

1e-57

98

9) C694_05655
( YP_006935011.1 )

IS605 transposase (tnpA)

NC_018939
(Helicobacter pylori 26695)

1e-57

98

10) C694_07955
( YP_006935461.1 )

IS605 transposase (tnpA)

NC_018939
(Helicobacter pylori 26695)

1e-57

98

11) C695_02220
( YP_006892924.1 )

IS605 transposase (tnpA)

NC_018937
(Helicobacter pylori Rif1)

1e-57

98

12) C695_05105
( YP_006893471.1 )

IS605 transposase (tnpA)

NC_018937
(Helicobacter pylori Rif1)

1e-57

98

13) C695_05155
( YP_006893479.1 )

IS605 transposase (tnpA)

NC_018937
(Helicobacter pylori Rif1)

1e-57

98

14) C695_05660
( YP_006893576.1 )

IS605 transposase (tnpA)

NC_018937
(Helicobacter pylori Rif1)

1e-57

98

15) C695_07975
( YP_006894029.1 )

IS605 transposase (tnpA)

NC_018937
(Helicobacter pylori Rif1)

1e-57

98

16) C730_02220
( YP_006935965.1 )

IS605 transposase (tnpA)

NC_018938
(Helicobacter pylori Rif2)

1e-57

98

17) C730_05100
( YP_006936511.1 )

IS605 transposase (tnpA)

NC_018938
(Helicobacter pylori Rif2)

1e-57

98

18) C730_05150
( YP_006936519.1 )

IS605 transposase (tnpA)

NC_018938
(Helicobacter pylori Rif2)

1e-57

98

19) C730_05655
( YP_006936616.1 )

IS605 transposase (tnpA)

NC_018938
(Helicobacter pylori Rif2)

1e-57

98

20) C730_07960
( YP_006937067.1 )

IS605 transposase (tnpA)

NC_018938
(Helicobacter pylori Rif2)

1e-57

98

21) tnpA
( YP_005775550.1 )

IS605 transposase

NC_017366
(Helicobacter pylori F32)

5e-57

96

22) tnpA
( YP_005784663.1 )

transposase

NC_017375
(Helicobacter pylori 83)

7e-56

93

23) HPV225_0873
( YP_005763789.1 )

IS605 transposase (tnpA)

NC_017355
(Helicobacter pylori v225d)

5e-55

92

24) bpr_II149
( YP_003832669.1 )

IS200/IS605 family transposase

NC_014389
(Butyrivibrio proteoclasticus B316)

5e-23

44

25) Mzhil_0810
( YP_004615891.1 )

transposase IS200-family protein

NC_015676
(Methanosalsum zhilinae DSM 4017)

2e-17

41

• Sequence Alignments

1) C694_02220 in NC_018939


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

2) C694_05100 in NC_018939


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

3) C694_05150 in NC_018939


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

4) C694_05655 in NC_018939


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

5) C694_07955 in NC_018939


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

6) HP0437 in NC_000915


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

7) HP0988 in NC_000915


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

8) HP0998 in NC_000915


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

9) HP1096 in NC_000915


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

10) HP1535 in NC_000915


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

11) C695_02220 in NC_018937


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

12) C695_05105 in NC_018937


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

13) C695_05155 in NC_018937


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

14) C695_05660 in NC_018937


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

15) C695_07975 in NC_018937


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

16) C730_02220 in NC_018938


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

17) C730_05100 in NC_018938


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

18) C730_05150 in NC_018938


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

19) C730_05655 in NC_018938


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

20) C730_07960 in NC_018938


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  215 bits (800),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 138/142 (98%), Positives = 142/142 (100%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSNFIII  60
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFVCSIGEANPETIKAYIENQG  142
            FFVCSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

21) tnpA in NC_017366


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  213 bits (792),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 136/142 (96%), Positives = 141/142 (99%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRGYIPTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSDFIII  60
            MRKNHYPLRGYI+TNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRDKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW+DKRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFACSIGEANPETIKAYIENQG  142
            FF CSIG+ANPETIKAYIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

22) tnpA in NC_017375


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  209 bits (777),  Expect = 7e-56, Method: Compositional matrix adjust.
 Identities = 131/142 (93%), Positives = 140/142 (99%), Gaps = 0/142 (0%)

Query  7    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNHFMKSVVDEIATQSDFIII  66
            MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLN+F+KSV+DEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  67   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRNKIFIPLLQKHFWKEKTFWTDG  126
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW++K FIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  127  FFACSIGEANPETIKSYIENQG  148
            FF CSIG+ANPETIK+YIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

23) HPV225_0873 in NC_017355


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  206 bits (767),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 130/142 (92%), Positives = 139/142 (98%), Gaps = 0/142 (0%)

Query  1    MRKNHYPLRVYIPTNRSKHNLKAHLILVCKYRKKLLQVDLNHFMKSVIDEIATQSDFIII  60
            MRKNHYPLR YI+TNRSKHNLKAHLILVCKYRKKLLQ DLN+F+KSVIDEIATQS+FIII
Sbjct  1    MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIII  60

Query  61   AMESDIDHLHLMVQYIPRMsissiisriKQITTYRVWRNKRFIPLLQKHFWKEKTFWTDG  120
            AMESDIDHLHLMVQYIPRMSISSIIS+IKQITTYRVW++KRFIPLLQKHFWKEKTFWTDG
Sbjct  61   AMESDIDHLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDG  120

Query  121  FFACSIGEANPETIKSYIENQG  142
            FF CSIG+ANPETIK+YIENQG
Sbjct  121  FFVCSIGQANPETIKAYIENQG  142

24) bpr_I2333 in NC_014387


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 57/132 (44%), Positives = 91/132 (69%), Gaps = 2/132 (1%)

Query  23   YNRQNRRKYSLKVHIVLVTKYRKQLLRGTIADDVKQKIYDISNSKRYSIIAMETDKDHIH  82
            Y   NR K +LK H++LV KYRK+LL+G + + +K  I +I+   ++ IIAME+D DH+H
Sbjct  11   YISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIIIAMESDIDHLH  70

Query  83   FLISYDTTDRVCDIVKLIKQQTTYYLWQ--KYPNFLSKQYWKKRIFWSDGYFACSIGEVS  140
            +++ Y     +  I+  IKQ TTY +W+  ++  +L K++WK + FW+DG+F CSIG+ +
Sbjct  71   LMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDGFFVCSIGQAN  130

Query  141  SATIQKYIESQG  152
            + TI+ YIE+QG
Sbjct  131  PETIKAYIENQG  142

25) bpr_II149 in NC_014389


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 59/135 (44%), Positives = 95/135 (71%), Gaps = 3/135 (2%)

Query  3    KDYNHGHRHKFLLRYHLILVCKNRRKLLSANNISSDIKTLAIHIANSHNVHIHHMEADKD  62
            ++Y   +R K  L+ HLILVCK R+KLL ++ +++ IK++  +IA   +  I  ME+D D
Sbjct  9    RGYISTNRSKHNLKAHLILVCKYRKKLLQGD-LNNFIKSVIDEIATQSHFIIIAMESDID  67

Query  63   HLHLMIETTPNINLSDFVRTLKSYTTYHIW--KEYTPYLSKCFWNERTFWSDGYFISSIG  120
            HLHLM++  P +++S ++  +K  TTY++W  K + P L K FW+E+TFW+DG+F+ SIG
Sbjct  68   HLHLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDGFFVCSIG  127

Query  121  EVSSDTLKHYIKNQG  135
            + +++T+K YI NQG
Sbjct  128  QANPETIKAYIENQG  142

26) Mzhil_0810 in NC_015676


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score = 82.3 bits (293),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 54/132 (41%), Positives = 93/132 (71%), Gaps = 3/132 (2%)

Query  3    YEKKNHSKFLLLYHVIFVCKYRRKAL-IDIEIELKDTLNDIAAKSNFEIVEMETDEVHIH  61
            Y   N+SK  L  H+I+VCKYR+K L  D++  +K  +++IA++S+F I+ ME+D  H+H
Sbjct  11   YISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIIIAMESDIDHLH  70

Query  62   LLIKSQPKYSILSIVRRLKQESTYRLWEQREL--HLKYYYWHERTLWSDGYFCSTIGNVS  119
            L+++  P+ SI SI+ ++KQ +TYR+W+++ +   L+  +W E+T+W+DG+F  +IG+ +
Sbjct  71   LMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDGFFVCSIGQAN  130

Query  120  KEMVLEYIRNQG  131
             E +  YI NQG
Sbjct  131  PETIKAYIENQG  142

27) PSHAa0581 in NC_007481


> U60177|2|G1|1752704|AAC44709.1|Helicobacter_pylori_CCUG_17874=NCTC_11638|-|83..511|tnpA|-|TnpA
Length=142

 Score = 75.2 bits (266),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 56/133 (43%), Positives = 89/133 (67%), Gaps = 3/133 (2%)

Query  2    EYETKSHCKYLIALHLILVVKYRKQLLKGDVGDFVKQKITEIAERSEFNIEEIEVDKDHI  61
             Y + ++ K  +  HLILV KYRK+LL+GD+ +F+K  I EIA +S+F I  +E D DH+
Sbjct  10   GYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDEIATQSHFIIIAMESDIDHL  69

Query  62   HILLTISPNISVASYVRRIKQSTTQSLWSRfkwfkkqfwv---kktfwSDGYFVCSVGNA  118
            H+++   P +S++S + +IKQ TT  +W   + +          KTFW+DG+FVCS+G+A
Sbjct  70   HLMVQYIPRMSISSIISKIKQITTYRVWHDKRFIPLLQKHFWKEKTFWTDGFFVCSIGQA  129

Query  119  AADTIRKYIQEQG  131
             ++TI+ YI++QG
Sbjct  130  NPETIKAYIENQG  142