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PAthogenisity Island DataBase (PAI DB)

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Homologs of SAOV_0414c gene of NC_017337_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAOV_0414c
( YP_005735930.1 )

integrase

NC_017337
(Staphylococcus aureus ED133)

3e-177

100

2) SAB0342c
( YP_415844.1 )

integrase

NC_007622
(Staphylococcus aureus RF122)

3e-177

100

3) C248_0448
( YP_006709209.1 )

Integrase

NC_018608
(Staphylococcus aureus 08BA02176)

5e-177

4) SAPIG0469
( YP_005733279.1 )

integrase

NC_017333
(Staphylococcus aureus ST398)

5e-177

5) ydcL
( YP_004374594.1 )

putative phage integrase

NC_015391
(Carnobacterium sp. 17-4)

6e-89

6) EHR_02815
( YP_006486430.1 )

integrase

NC_018081
(Enterococcus hirae ATCC 9790)

1e-84

7) EFS1_1546
( YP_007153338.1 )

integrase

NC_019770
(Enterococcus faecalis Symbioflor 1)

2e-76

8) Bsph_0482
( YP_001696237.1 )

prophage Lp3 protein 1, integrase

NC_010382
(Lysinibacillus sphaericus C3-41)

2e-75

9) Lbuc_0020
( YP_004397374.1 )

integrase family protein

NC_015428
(Lactobacillus buchneri NRRL B-30929)

3e-68

10) lp_2480
( YP_004890166.1 )

prophage P2b protein 1, integrase

NC_004567
(Lactobacillus plantarum WCFS1)

2e-67

11) ECBG_01612
( YP_007751715.1 )

hypothetical protein

NC_020995
(Enterococcus casseliflavus EC20)

4e-67

12) HMPREF0351_10580
( YP_006375186.1 )

bacteriophage integrase

NC_017960
(Enterococcus faecium DO)

2e-66

13) Lp16_1969
( YP_008121785.1 )

prophage P2b protein 1, integrase

NC_021514
(Lactobacillus plantarum 16)

2e-66

14) SSUA7_1364
( YP_006085026.1 )

putative phage integrase

NC_017622
(Streptococcus suis A7)

5e-65

15) SSGZ1_1364
( YP_006074762.1 )

integrase

NC_017617
(Streptococcus suis GZ1)

5e-65

16) SSUJS14_1499
( YP_006076830.1 )

putative phage integrase

NC_017618
(Streptococcus suis JS14)

5e-65

17) SSU1347
( YP_003027195.1 )

phage integrase

NC_012925
(Streptococcus suis P1/7)

5e-65

18) NJAUSS_1413
( YP_007571356.1 )

integrase

NC_020526
(Streptococcus suis SC070731)

5e-65

19) SSUSC84_1377
( YP_003025369.1 )

phage integrase

NC_012924
(Streptococcus suis SC84)

5e-65

20) SSU12_1416
( YP_006078843.1 )

putative phage integrase

NC_017619
(Streptococcus suis SS12)

5e-65

21) SSUBM407_1424
( YP_003029128.1 )

phage integrase

NC_012926
(Streptococcus suis BM407)

1e-64

22) SPPN_05300
( YP_004768356.1 )

integrase

NC_015875
(Streptococcus pseudopneumoniae IS7493)

2e-63

23) LVISKB_0737
( YP_007653577.1 )

ICEBs1 integrase

NC_020819
(Lactobacillus brevis KB290)

5e-63

24) EHR_00880
( YP_006486061.1 )

prophage Lp3 protein 1, integrase

NC_018081
(Enterococcus hirae ATCC 9790)

1e-62

25) JDM1_0030
( YP_003061616.1 )

prophage Lp3 protein 1, integrase

NC_012984
(Lactobacillus plantarum JDM1)

3e-62

26) OB0153
( NP_691074.1 )

integrase

NC_004193
(Oceanobacillus iheyensis HTE831)

4e-61

27) EHR_09400
( YP_006487679.1 )

phage integrase

NC_018081
(Enterococcus hirae ATCC 9790)

5e-61

28) EHR_01850
( YP_006486245.1 )

phage integrase family site specific recombinase

NC_018081
(Enterococcus hirae ATCC 9790)

6e-61

29) TEH_08260
( YP_004886317.1 )

putative phage integrase

NC_016052
(Tetragenococcus halophilus NBRC 12172)

8e-61

30) xerC
( YP_005353768.1 )

site-specific tyrosine recombinase XerC-family

NC_017022
(Enterococcus faecium Aus0004)

8e-61

31) xerC
( YP_008394027.1 )

site-specific tyrosine recombinase XerC-family

NC_021994
(Enterococcus faecium AUS0085)

8e-61

32) HMPREF0351_10594
( YP_006375200.1 )

phage integrase

NC_017960
(Enterococcus faecium DO)

8e-61

33) STP_1281
( YP_004479401.1 )

integrase

NC_015558
(Streptococcus parauberis KCTC 11537)

7e-59

34) SAIL_6830
( YP_008117302.1 )

Mobile element protein

NC_021507
(Streptococcus agalactiae ILRI112)

2e-55

35) L897_07765
( YP_008243805.1 )

integrase

NC_021807
(Streptococcus pyogenes HSC5)

2e-55

36) MSA_7080
( YP_008086449.1 )

Mobile element protein

NC_021486
(Streptococcus agalactiae ILRI005)

3e-55

37) int1
( YP_598970.1 )

DNA integration/recombination/inversion protein

NC_008022
(Streptococcus pyogenes MGAS10270)

5e-55

38) M28_Spy1285
( YP_280750.1 )

DNA integration/recombination/invertion protein

NC_007296
(Streptococcus pyogenes MGAS6180)

5e-55

39) int315.4
( NP_665070.1 )

integrase - phage associated

NC_004070
(Streptococcus pyogenes MGAS315)

6e-55

40) SPs0597
( NP_801859.1 )

phage associated integrase

NC_004606
(Streptococcus pyogenes SSI-1)

6e-55

41) M6_Spy0020
( YP_059338.1 )

DNA integration/recombination/invertion protein

NC_006086
(Streptococcus pyogenes MGAS10394)

2e-54

42) int315.6
( NP_665262.1 )

integrase - phage associated

NC_004070
(Streptococcus pyogenes MGAS315)

2e-54

43) SPs0408
( NP_801670.1 )

integrase

NC_004606
(Streptococcus pyogenes SSI-1)

2e-54

44) STP_1303
( YP_004479423.1 )

integrase

NC_015558
(Streptococcus parauberis KCTC 11537)

1e-52

45) LSA0586
( YP_395201.1 )

site-specific recombinase, prophage lsa1 integrase

NC_007576
(Lactobacillus sakei 23K)

3e-51

46) SSU05_1529
( YP_001198895.1 )

prophage Lp3 protein 1, integrase

NC_009442
(Streptococcus suis 05ZYH33)

2e-50

47) LAC30SC_02060
( YP_004286734.1 )

integrase

NC_015214
(Lactobacillus acidophilus 30SC)

9e-47

48) BLi01428
( YP_006712805.1 )

phage integrase

NC_006322
(Bacillus licheniformis DSM 13)

2e-44

49) BL01373
( YP_078616.1 )

lambda integrase-like protein(phage related)

NC_006270
(Bacillus licheniformis DSM 13)

2e-44

• Sequence Alignments

1) SAOV_0414c in NC_017337


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  614 bits (2320),  Expect = 3e-177, Method: Compositional matrix adjust.
 Identities = 378/378 (100%), Positives = 378/378 (100%), Gaps = 0/378 (0%)

Query  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60
            MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120
            NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN
Sbjct  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180
            KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK
Sbjct  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180

Query  181  QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI  240
            QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI
Sbjct  181  QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI  240

Query  241  QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE  300
            QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE
Sbjct  241  QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE  300

Query  301  HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV  360
            HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV
Sbjct  301  HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV  360

Query  361  TEKQRDQVADKFAKYINF  378
            TEKQRDQVADKFAKYINF
Sbjct  361  TEKQRDQVADKFAKYINF  378

2) SAB0342c in NC_007622


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  614 bits (2320),  Expect = 3e-177, Method: Compositional matrix adjust.
 Identities = 378/378 (100%), Positives = 378/378 (100%), Gaps = 0/378 (0%)

Query  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60
            MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120
            NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN
Sbjct  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180
            KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK
Sbjct  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180

Query  181  QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI  240
            QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI
Sbjct  181  QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI  240

Query  241  QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE  300
            QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE
Sbjct  241  QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE  300

Query  301  HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV  360
            HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV
Sbjct  301  HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV  360

Query  361  TEKQRDQVADKFAKYINF  378
            TEKQRDQVADKFAKYINF
Sbjct  361  TEKQRDQVADKFAKYINF  378

3) C248_0448 in NC_018608


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  613 bits (2317),  Expect = 5e-177, Method: Compositional matrix adjust.
 Identities = 376/378 (99%), Positives = 378/378 (100%), Gaps = 0/378 (0%)

Query  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60
            MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120
            NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN
Sbjct  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180
            KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK
Sbjct  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180

Query  181  QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWKDIDFTKQTISINKTCARGANYKLII  240
            QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTW+DIDFTKQTISINKTCARGANYKL+I
Sbjct  181  QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI  240

Query  241  QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE  300
            QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE
Sbjct  241  QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE  300

Query  301  HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV  360
            HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV
Sbjct  301  HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV  360

Query  361  TEKQRDQVADKFAKYINF  378
            TEKQRDQVADKFAKYINF
Sbjct  361  TEKQRDQVADKFAKYINF  378

4) SAPIG0469 in NC_017333


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  613 bits (2317),  Expect = 5e-177, Method: Compositional matrix adjust.
 Identities = 376/378 (99%), Positives = 378/378 (100%), Gaps = 0/378 (0%)

Query  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60
            MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120
            NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN
Sbjct  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180
            KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK
Sbjct  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180

Query  181  QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWKDIDFTKQTISINKTCARGANYKLII  240
            QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTW+DIDFTKQTISINKTCARGANYKL+I
Sbjct  181  QFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI  240

Query  241  QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE  300
            QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE
Sbjct  241  QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPE  300

Query  301  HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV  360
            HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV
Sbjct  301  HCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHV  360

Query  361  TEKQRDQVADKFAKYINF  378
            TEKQRDQVADKFAKYINF
Sbjct  361  TEKQRDQVADKFAKYINF  378

5) ydcL in NC_015391


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  321 bits (1203),  Expect = 6e-89, Method: Compositional matrix adjust.
 Identities = 191/380 (51%), Positives = 270/380 (72%), Gaps = 4/380 (1%)

Query  4    INKYKTKDGKTAYKFNAYLGTDSMTGKKKRTTRQGFKTKKEATLALSRLKLDIEMNGFKK  63
            I+KYK KDG TAY F AYLGTD++TGK+KRTTR+GFKT +EA +A ++L+ ++  NGF +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  64   SSTSKFKDVYELWIVQYKNTVKESTLNKTLELFNNHILPIFGDLYMDKITVVFCQAALND  123
            +  + FK+VYELW+ QY+NTV+EST ++ L LF+  IL  F D+ + KITV +CQ  +N 
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  124  WYKRLQKYKAISNYASRIFDYAITISAVEINPFKKVSMPIRKVDVEEEKVLNFYNKEELT  183
            W K+    KAI  Y+S +F YA+++  +  NPF     P RK + +++   ++Y+ +EL 
Sbjct  122  WNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAP-RKKEAQQDASTKYYSSDELK  180

Query  184  LFFDHLKRENKPLQLALFRTLAFTGARKGEILALQWRDINFTDNTIKINKTVTFGLDNVL  243
             F+  +  E+ PL  A+FRTLAFTG R+GE++AL W DI+FT +TI INKT + G +  L
Sbjct  181  QFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKL  238

Query  244  IIQTPKTKTSVRSISMDPQTMKILKSWKKTQKETYFKLGFNTLNPTQLVFPSTKNT-VMQ  302
            +IQ PKTK+S R+IS+D +T  +LKSW+  Q+   +K G NT +  Q VF + ++   + 
Sbjct  239  VIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLY  298

Query  303  PPKVGKYLDRLVNLYELKRITPHGFRHTHCSLLFEAGASVKEVQDRLGHSNIQTTMNIYA  362
            P    K LD + +   +KRI  HGFRHTHCSLLFEAG S++EVQDRLGH++I+TTM+IYA
Sbjct  299  PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYA  358

Query  363  HVTEKAKENTADKFAKYVNF  382
            HVTEK +++ ADKFAKY+NF
Sbjct  359  HVTEKQRDQVADKFAKYINF  378

6) EHR_02815 in NC_018081


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  307 bits (1149),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 178/380 (47%), Positives = 276/380 (73%), Gaps = 3/380 (0%)

Query  3    MIKQYQKKNGEKAWYFKTYLGIDPLTGKKRYTTKRGFKTQKEAKIALARLEVLATDKKLV  62
            MIK+Y+KK+G  A  F +YLG DP+TGK++ TT+RGFKT++EAKIA A+L+   +++ ++
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  63   KDNNYTFTQVKDMWIEQYKPTVRESTYLRVKFLFDKNISTFFGNKKIQSYNIAYCQEAIN  122
            +++  TF +V ++W+EQY+ TVRESTY RV  LFD  I   F +  I+   ++YCQ  IN
Sbjct  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  123  KWKEQYSTYKALKCYTSAVFDYAKKMNLIKENPMKEVTFSKGERKQKKTKLKYFEKEELQ  182
            KW+ +YS  KA++ YTS VF YA  +++I +NP  +   ++    Q+ +  KY+  +EL+
Sbjct  121  KWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180

Query  183  DFLECCQKDKFLITYPLFRVLAFTGIRKGEALALTWDDVDFFNKTLEINKTITRNSDNKF  242
            +FL   + D +   Y++FR LAFTG+R+GE +ALTW+D+DF ++T+ INKT +R ++ K+
Sbjct  181  QFLTFVEDDPLY--YAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKL  238

Query  243  ISTPPKTNTSIRKISLDDETLNILKAWKTQQKRYLLAHGQHAKTKNQIIFSS-KNNNCID  301
            +   PKT++S R IS+DD T ++LK+W+T+Q+   L  G+++  K+Q +F++ ++N+ + 
Sbjct  239  VIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLY  298

Query  302  ITRPNIILSRICKEHNFNDITIHGFRHTHCSLLFETGLSIKEVQERLGHSDIHTTMNIYT  361
              + N  L  IC  ++F+ I +HGFRHTHCSLLFE+GLSI+EVQ+RLGH+DI TTM+IY+
Sbjct  299  PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYA  358

Query  362  HVTKKQKERSADKFAAYLNF  381
            HVT KQ+++ ADKFA Y+NF
Sbjct  359  HVTEKQRDQVADKFAKYINF  378

7) EFS1_1546 in NC_019770


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 174/380 (46%), Positives = 262/380 (69%), Gaps = 9/380 (2%)

Query  4    IKKYTKKDGSTAYMFNAYLGVDPVTGKSRRTTRRGFRTQKEAKLALSRLELEVDSKGFVK  63
            IKKY KKDGSTAYMF AYLG DP+TGK +RTTRRGF+T++EAK+A ++L+ EV  +GF++
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  64   QNYSTFKDVYELWYAQYVNTVKPITAGHTERMFRLHILPEFGNIKINKLTKLMCQKAVNK  123
            ++ +TFK+VYELW  QY NTV+  T  +   +F   IL +F ++ I+K+T   CQK +NK
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  124  WSKEYSAFHLLKSITQKMLHYAVAQDIIDINPMQYVVMPkkdktnetkkkQFLELSELKD  183
            W+K YS +  ++  T +++ YAV+  II  NP      P+K  +++    ++    ELK+
Sbjct  122  WNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQ  181

Query  184  FLAEAKETLNFQDYLIFRVLAFTGIRKGELYALTWEDINISYKQLTVNKTLTRIGKEY--  241
            FL+   +   +  Y IFR LAFTG+R+GEL ALTW+DI+++ + +++NKT +R G +Y  
Sbjct  182  FLTFVEDDPLY--YAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCAR-GANYKL  238

Query  242  IISTPKTKASNRTIGLDDTTVSELIVWKKHQKQELLKYGFKTKSNDKQLIFHRKNNTLHY  301
            +I  PKTK+S+RTI++DD T S L  W+ HQ+ E LKYG +T  ++++++   ++N   Y
Sbjct  239  VIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLY  298

Query  302  PEHIN--FLLSSEMKT--SLSPHSFRHTHASLLFESGATIKDVQKRLGHTNVNTTMDIYT  357
            PEH N  + L  E ++   +  H+FRHTH SLLFE+G +I++VQ RLGH +++TTMDIY+
Sbjct  299  PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYA  358

Query  358  HVTKSSERKAIDKLSNYANF  377
            HVT     +  DK+++Y NF
Sbjct  359  HVTEKQRDQVADKFAKYINF  378

8) Bsph_0482 in NC_010382


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  276 bits (1031),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 163/383 (43%), Positives = 258/383 (68%), Gaps = 9/383 (2%)

Query  9    IKSYELKNGETRYEFPVYLGIDPLTGKQKRTMKRGFKTHKQAELALARIKLDVANGTYKQ  68
            IK Y  K+G T Y F  YLG DP+TGKQKRT +RGFKT+++A +A A+++ +V++  + +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  69   ARAETYQELYDLWIPHYEKTVEESTFTKTVGIFRNHILPAMREYKIDKITVDVCQKHVDK  128
                T++E+Y+LW+ +Y++TV EST+ + + +F   IL   ++  I KITV  CQK ++K
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  129  WAEKLKKFRVVKAYAAKVLDFAIKRGYMQTNPFTHVDMPIAASKKVTIIEEEEAENFYTR  188
            W  K   ++ ++ Y+++V+ +A+    +  NPF+H   P    KK +  +++ + ++Y+ 
Sbjct  122  WNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAP---RKKEA--QQDASTKYYSS  176

Query  189  EQLIQFLACLEQENNYKAYALFRLLAFSGMRKGEALALTWNDLNFTTNEMRINKALSRGK  248
            ++L QFL+ +E++  Y  YA+FR LAF+G R+GE +ALTWND++FT + + INK+ +RG 
Sbjct  177  DELKQFLTFVEDDPLY--YAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  249  NNKLYVKSTKT-GFARTIKMDDKTMAILKEWKKKQKQEYLVLGFNTMQPKQLVFSNERNE  307
            N KL ++  KT +  RTI +DDKT ++LK W+  Q+ E L  G NT +  Q VF+  R++
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  308  -FLQPTKTRKWILHVQKKYKLGTITTHGLRHTHCSLLFEAGASLKEVQDRLGHSDVQTTM  366
              L P    K +  +  K  +  I  HG+RHTHCSLLFEAG S++EVQDRLGH+D++TTM
Sbjct  295  KPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM  354

Query  367  NIYAHVTKKAKEEAIQKFASYLE  389
            +IYAHVT K +++  +KFA Y++
Sbjct  355  DIYAHVTEKQRDQVADKFAKYIN  377

9) Lbuc_0020 in NC_015428


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  252 bits (941),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 160/382 (42%), Positives = 251/382 (66%), Gaps = 7/382 (1%)

Query  4    IKGYTLKNGNKCYLFQVYAGLDPQTGKPKRIMKRGFKTKKEATLAANQLELSISRGDFHQ  63
            IK Y  K+G+  Y+F  Y G DP TGK KR  +RGFKT +EA +A  +L+  +S+ +F +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  64   ESNILFRQVYEQWYQGYINTVRVSTYCRTAGMFENHILPELGNKRIRTITIAQVQRAVNK  123
            +    F++VYE W + Y NTVR STY R   +F+  IL ++ +  I+ IT++  Q+ +NK
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  124  WFKQATYNYKRWYEYTMAIFDYALKHGYMHGDNPAKMITIPKRKETWGEKPENFWDKQQL  183
            W K+ + + K    YT  +F YA+    +  DNP      P++KE+  + + ++   ++L
Sbjct  122  WNKKYS-DIKAIRIYTSNVFKYAVSLKII-VDNPFAHTKAPRKKEAQQDASTKYYSSDEL  179

Query  184  AQFFSYIDPKEELEKYTLFRVLAFAGVRRGECLALTWNDVNFSKSTLSINKTLTQGMRGK  243
             QF+++++  ++   Y++FR LAF+G RRGE +ALTWND++F+K T+SINKT ++G   K
Sbjct  180  KQFLTFVE--DDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYK  237

Query  244  QIIQPPKTKKGQRVIALDKITLNYLKQWRARQRREYLMLGFNTIQRGQLIFANSNNGFKS  303
             +IQ PKTK ++R I++D  T + LK WR++QR E L  G NT ++ Q +F+   +  K+
Sbjct  238  LVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN-KP  296

Query  304  L--NTPAKWLNKIIKAHNLKKITVHGFRHTSASMLFAAGATIKEVQTRLGHEDAQTTLNI  361
            L  +   K L+ I   +++K+I VHGFRHT  S+LF AG +I+EVQ RLGH D +TT++I
Sbjct  297  LYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDI  356

Query  362  YTHVTKKQDNQAAEKLANYLDF  383
            Y+HVT KQ +Q A+K+A+Y++F
Sbjct  357  YAHVTEKQRDQVADKFAKYINF  378

10) lp_2480 in NC_004567


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  249 bits (931),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 155/384 (41%), Positives = 254/384 (67%), Gaps = 9/384 (2%)

Query  4    IKKYQDKDGNTRYQFQVYLGVDPLTGKKKNTRRRGFKTKKEAQIVLSRLELDIYNHGLPT  63
            IKKY+ KDG+T Y F  YLG DP+TGK+K T RRGFKT +EA+I  ++L+ ++ ++G+  
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGF-L  60

Query  64   KNDNTIFKDIYQLWFTQYKQTVKESTWVTTQRLFRLHILPIFSDYRIAKISIKDCQKAIN  123
            +ND T FK++Y+LW+ QY++TV+EST      LF   IL  F D  I KI++  CQK IN
Sbjct  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  124  QWFNAGLAKYHTLMNYVAKVLDYAINIDLISENPAKRVIVPVNKNDRSRKNLENYFDKAE  183
            +W N   +   ++  Y ++V+ YA+++ +I +NP  +   P  K++  +    +Y+   E
Sbjct  121  KW-NKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAP-RKKEAQQDASTKYYSSDE  178

Query  184  LQHFFECLTDDDNTPQASVFFRLAAFTGMRKSEMLCLEWSDIDFSNHTIRVNKTQSRGDG  243
            L++F   LT  ++ P    +FR  AFTG R++E++ L W+DIDF+++TI +NKT +RG  
Sbjct  179  LKQF---LTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGAN  235

Query  244  ARLLVQAPKTARSNRTVYLDPTTIKILQHWQVDQKKWLLRFGFNINQGNHYVFAN--ENN  301
             +L++Q PKT  S+RT+ +D  T  +L+ W+ +Q+   L++G N ++ ++ VF+   +N+
Sbjct  236  YKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNK  295

Query  302  EMFQPSKPRKWLEHTLTKYDLKHVTVHAFRHTYATLAFEAHASIKSVQDQLGHSSYRTTL  361
             ++ P    K L+    K  +K++ VH+FRHT  +L FEA  SI+ VQD+LGH+  +TT+
Sbjct  296  PLY-PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM  354

Query  362  DIYTAVTAKQKNEATEKLANYLNF  385
            DIY+ VT KQ+++ ++K+A+Y+NF
Sbjct  355  DIYAHVTEKQRDQVADKFAKYINF  378

11) ECBG_01612 in NC_020995


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  248 bits (927),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 162/376 (44%), Positives = 247/376 (66%), Gaps = 6/376 (1%)

Query  7    YKLQNGEKYWGFEAYLGKDPKTGKDIRTKRRRFKSKAEAQIALNRLLVDFKEKQEFKINV  66
            YK ++G     F AYLG DP TGK+ RT RR FK+  EA+IA  +L  +  ++  ++ ++
Sbjct  5    YKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLNNDI  64

Query  67   TTFQELYELWIDNYRTRVKPSSVAVAQRFCKNHILPAFGELRLDKISVSYCQKQVNEWHK  126
            TTF+E+YELW+++Y+  V+ S+      +    IL  F ++ + KI+V+YCQK +N W+K
Sbjct  65   TTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINKWNK  124

Query  127  TLKQYGFLRKTTAQIFKFGVAMEVCKDNPMSKTLLPRKIEEEQ--PLKFYTKDQLQLFLK  184
               +   +R  T+++FK++V++ +  DNP + T  PRK E +Q  + K+Y+ D+L+ FL 
Sbjct  125  KYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQFLT  184

Query  185  NTKENNSVKLYTFFRLLAYTGMRKSEALALQWEDIDYFNKTITIGKTIAQDEFNQVVLQV  244
               ++     Y++FR LA+TG R++E +AL W+DID+ ++TI+I KT A++   ++V+Q 
Sbjct  185  FVEDDPL--YYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVIQE  242

Query  245  PKTKNSSRTIQLDDFTLKQLRIWQQEQMKIMILYGYNTNSPKQFLFTT-NTNKLYYPQVV  303
            PKTK+S RTI +DD T   L+ W+ +Q    + YG NT+   Q +FTT   NK  YP+  
Sbjct  243  PKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPEHC  302

Query  304  NDWLDWIYKKTPMEPQITPHGFRHTHCSLLFESGASIKEVQERLGHKDIKTTMNIYAHVT  363
            N  LD I  K +   +I  HGFRHTHCSLLFE+G SI+EVQ+RLGH DIKTTM+IYAHVT
Sbjct  303  NKALDLICEKNSFK-RIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHVT  361

Query  364  PQSIKKTGDRFAKFMG  379
             +   + +D+FAK++ 
Sbjct  362  EKQRDQVADKFAKYIN  377

12) HMPREF0351_10580 in NC_017960


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  246 bits (918),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 160/376 (43%), Positives = 246/376 (66%), Gaps = 6/376 (1%)

Query  7    YKLQNGEKYWGFETYLGKDPKTGKDIRTKRRRFKSKAEAQTALNRLLVDFKEKQEFKINV  66
            YK ++G     F +YLG DP TGK+ RT RR FK+  EA+ A  +L  +  ++  ++ ++
Sbjct  5    YKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLNNDI  64

Query  67   TTFQELYELWIDNYRTRVKPSSVAVAQRFCKNHILPAFGELRLDKISVSYCQKQVNEWHK  126
            TTF+E+YELW+++Y+  V+ S+      +    IL  F ++ + KI+V+YCQK +N W+K
Sbjct  65   TTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINKWNK  124

Query  127  TLKQYGFLRKTTAQIFKFGVAMEVCKDNPMSKTLLPRKIEEEQ--PLKFYTKDQLQLFLQ  184
               +   +R  T+++FK++V++ +  DNP + T  PRK E +Q  + K+Y+ D+L+ FL 
Sbjct  125  KYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQFLT  184

Query  185  NTKENNSVKLYTFFRLLAYTGMRKSEALALQWEDIDYFNKTITIGKTIAQDEFNQVVLQV  244
               ++     Y++FR LA+TG R++E +AL W+DID+ ++TI+I KT A++   ++V+Q 
Sbjct  185  FVEDDPL--YYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVIQE  242

Query  245  PKTKNSSRTIQLDDFTLKQLRIWQQEQMKIMILYGYNTNSPKQFLFTT-NTNKLYYPQVV  303
            PKTK+S RTI +DD T   L+ W+ +Q    + YG NT+   Q +FTT   NK  YP+  
Sbjct  243  PKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPEHC  302

Query  304  NDWLDWIYKKTPMEPQITPHGFRHTHCSLLFESGASIKEVQERLGHKDIKTTMNIYAHVT  363
            N  LD I  K +   +I  HGFRHTHCSLLFE+G SI+EVQ+RLGH DIKTTM+IYAHVT
Sbjct  303  NKALDLICEKNSFK-RIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHVT  361

Query  364  PQSVKKTGDRFAKFMG  379
             +   + +D+FAK++ 
Sbjct  362  EKQRDQVADKFAKYIN  377

13) Lp16_1969 in NC_021514


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  246 bits (918),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 155/384 (41%), Positives = 253/384 (66%), Gaps = 9/384 (2%)

Query  4    IKKYQDKDGNTRYQFQVYLGVDPLTGKKKNTRRRGFKTKKEAQIVLSRLELDIYNHGLPT  63
            IKKY+ KDG+T Y F  YLG DP+TGK+K T RRGFKT +EA+I  ++L+ ++ ++G+  
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGF-L  60

Query  64   KNDNTIFKDIYQLWFTQYKQTVKESTWVTTQRLFRLHILPIFSDYRIAKISIKDCQKAIN  123
            +ND T FK++Y+LW+ QY++TV+EST      LF   IL  F D  I KI++  CQK IN
Sbjct  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  124  QWFNAGLVKYHTLMNYVAKVLDYAINIDLISENPAKRVIVPVNKNDRSRKNLENYFDKAE  183
            +W N       ++  Y ++V+ YA+++ +I +NP  +   P  K++  +    +Y+   E
Sbjct  121  KW-NKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAP-RKKEAQQDASTKYYSSDE  178

Query  184  LQYFFECLNDDDNTPQANVFFRLAAFTGMRKSEMLCLEWSDIDFSNHTIRVNKTQSRGDG  243
            L+ F+  ++DD   P    +FR  AFTG R++E++ L W+DIDF+++TI +NKT +RG  
Sbjct  179  LKQFLTFVEDD---PLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGAN  235

Query  244  ARLLVQAPKTARSNRTVYLDPTTIKILQHWQVDQKEWLLRFGFNINQGNHYVFAN--ENN  301
             +L++Q PKT  S+RT+ +D  T  +L+ W+ +Q+   L++G N ++ ++ VF+   +N+
Sbjct  236  YKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNK  295

Query  302  EMFQPSKPRKWLEHTLTKYDLKHVTVHAFRHTYATLAFEAHASIKSVQDQLGHSSYRTTL  361
             ++ P    K L+    K  +K++ VH+FRHT  +L FEA  SI+ VQD+LGH+  +TT+
Sbjct  296  PLY-PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM  354

Query  362  DIYTAVTAKQKNEATEKLANYLNF  385
            DIY+ VT KQ+++ ++K+A+Y+NF
Sbjct  355  DIYAHVTEKQRDQVADKFAKYINF  378

14) SSUA7_1364 in NC_017622


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  241 bits (900),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 166/385 (44%), Positives = 243/385 (64%), Gaps = 14/385 (3%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGFKT +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQF--LNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   ++   L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKT  354
               +        +L C  + +    I  HGFRHTHCSLLFEAG SI+EVQ+RLGH DIKT
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKT  352

Query  355  TMNIYAHVTENTKEKTAEKFAQFLG  379
            TM+IYAHVTE+ +++ A+KFA+++ 
Sbjct  353  TMDIYAHVTEKQRDQVADKFAKYIN  377

15) SSGZ1_1364 in NC_017617


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  241 bits (900),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 166/385 (44%), Positives = 243/385 (64%), Gaps = 14/385 (3%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGFKT +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQF--LNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   ++   L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKT  354
               +        +L C  + +    I  HGFRHTHCSLLFEAG SI+EVQ+RLGH DIKT
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKT  352

Query  355  TMNIYAHVTENTKEKTAEKFAQFLG  379
            TM+IYAHVTE+ +++ A+KFA+++ 
Sbjct  353  TMDIYAHVTEKQRDQVADKFAKYIN  377

16) SSUJS14_1499 in NC_017618


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  241 bits (900),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 166/385 (44%), Positives = 243/385 (64%), Gaps = 14/385 (3%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGFKT +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQF--LNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   ++   L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKT  354
               +        +L C  + +    I  HGFRHTHCSLLFEAG SI+EVQ+RLGH DIKT
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKT  352

Query  355  TMNIYAHVTENTKEKTAEKFAQFLG  379
            TM+IYAHVTE+ +++ A+KFA+++ 
Sbjct  353  TMDIYAHVTEKQRDQVADKFAKYIN  377

17) SSU1347 in NC_012925


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  241 bits (900),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 166/385 (44%), Positives = 243/385 (64%), Gaps = 14/385 (3%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGFKT +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQF--LNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   ++   L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKT  354
               +        +L C  + +    I  HGFRHTHCSLLFEAG SI+EVQ+RLGH DIKT
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKT  352

Query  355  TMNIYAHVTENTKEKTAEKFAQFLG  379
            TM+IYAHVTE+ +++ A+KFA+++ 
Sbjct  353  TMDIYAHVTEKQRDQVADKFAKYIN  377

18) NJAUSS_1413 in NC_020526


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  241 bits (900),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 166/385 (44%), Positives = 243/385 (64%), Gaps = 14/385 (3%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGFKT +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQF--LNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   ++   L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKT  354
               +        +L C  + +    I  HGFRHTHCSLLFEAG SI+EVQ+RLGH DIKT
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKT  352

Query  355  TMNIYAHVTENTKEKTAEKFAQFLG  379
            TM+IYAHVTE+ +++ A+KFA+++ 
Sbjct  353  TMDIYAHVTEKQRDQVADKFAKYIN  377

19) SSUSC84_1377 in NC_012924


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  241 bits (900),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 166/385 (44%), Positives = 243/385 (64%), Gaps = 14/385 (3%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGFKT +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQF--LNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   ++   L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKT  354
               +        +L C  + +    I  HGFRHTHCSLLFEAG SI+EVQ+RLGH DIKT
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKT  352

Query  355  TMNIYAHVTENTKEKTAEKFAQFLG  379
            TM+IYAHVTE+ +++ A+KFA+++ 
Sbjct  353  TMDIYAHVTEKQRDQVADKFAKYIN  377

20) SSU12_1416 in NC_017619


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  241 bits (900),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 166/385 (44%), Positives = 243/385 (64%), Gaps = 14/385 (3%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGFKT +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQF--LNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   ++   L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKT  354
               +        +L C  + +    I  HGFRHTHCSLLFEAG SI+EVQ+RLGH DIKT
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKT  352

Query  355  TMNIYAHVTENTKEKTAEKFAQFLG  379
            TM+IYAHVTE+ +++ A+KFA+++ 
Sbjct  353  TMDIYAHVTEKQRDQVADKFAKYIN  377

21) SSUBM407_1424 in NC_012926


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  240 bits (896),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 165/385 (43%), Positives = 243/385 (64%), Gaps = 14/385 (3%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFNTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGF+T +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTRQF--LNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   ++   L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKT  354
               +        +L C  + +    I  HGFRHTHCSLLFEAG SI+EVQ+RLGH DIKT
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKT  352

Query  355  TMNIYAHVTENTKEKTAEKFAQFLG  379
            TM+IYAHVTE+ +++ A+KFA+++ 
Sbjct  353  TMDIYAHVTEKQRDQVADKFAKYIN  377

22) SPPN_05300 in NC_015875


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  236 bits (881),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 159/382 (42%), Positives = 245/382 (65%), Gaps = 10/382 (2%)

Query  1    MIKKYITKKGETRYLFQTYLGIDPATGKEKRTTRRGFKTIKEAKAAERDLLLDVEENVFS  60
            MIKKY  K G T Y+F +YLG DP TGK+KRTTRRGFKT +EAK AE  L  +V +N F 
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   NNEDFQNPTFAEVAELWLDSYKSTVKPTTYQNVKKKLRIIIDSYFTDMKIQQISVAYCQK  120
            NN+     TF EV ELWL+ Y++TV+ +TYQ V   +   I   F D+ I++I+V+YCQK
Sbjct  61   NND---ITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQK  117

Query  121  VAIQLSNRYILYANYYSVISRIFKYAVSLDIIKLNPLDKIIKPKNRPLK--GKENHYTKQ  178
            V  + +++Y          S +FKYAVSL II  NP+     P+++  +  +  + Y+ +
Sbjct  118  VINKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSD  177

Query  179  ELTEFLKVYKVNCKPVDYTFFHLLAFSGLRTGESIGLMWSDVDFENKLLSISRTAVVIGK  238
            EL +FL    V+  P+ Y++F+ LAF+G+R GE ++L W+D+DF ++ +SI++T    ++
Sbjct  178  ELKQFLTF--VEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGAN  235

Query  239  -KQTVQDPKTKRSKRVITLDDETLNVLKLWKRQQIKEYFQAGVPYKRESNYIFTNSFGGW  297
             K  +Q+PKTK S R I++DD T +VLK W+ +Q  E ++ G       + +FT   +  
Sbjct  236  YKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNK  295

Query  298  -ISPSAVKERLRRFFCEHKDVKKITPHGFRHTHASLLFEAGITAKIISDRLGHNNVQTTL  356
             + P   +  L  ++CE +  K+I  HGFRHTH SLLFEAG++ + + DRLGH +++TT+
Sbjct  296  PLYPEHCNKAL-DLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM  354

Query  357  DMYTHINDNQRFEVVDQLMDFI  378
            D+Y+H+ ++QR +V D++  +I
Sbjct  355  DIYAHVTEKQRDQVADKFAKYI  376

23) LVISKB_0737 in NC_020819


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  235 bits (875),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 247/382 (65%), Gaps = 8/382 (2%)

Query  4    IKKYTDKHGETRYSFQLYVGTNPQTGKPKKTSRRGFKTRKEATLAASRLELEASTGSLQQ  63
            IKKY  K+G T Y F  Y+GT+P TGK K+T+RRGFKT +EA +A ++L+ E S  ++ +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  64   DNNILFETVYHEWYEVYANTVQESTTVRVTGMFDSHILPAFGNKRIRTITLSALQSAVND  123
            ++   F  VY+ W E Y NTV+EST  RV  +FD+ IL  F +  I+ IT++  Q  +N 
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  124  WSKEVKRNYKRWYYYTRQVFQYALKVGYIDNNPATLVTVPKPDISWQRDKNKFWTKAQMV  183
            W+K    + K    YT +VF+YA+ +  I +NP +    P+   + Q    K+ +  ++ 
Sbjct  122  WNKKYS-DIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELK  180

Query  184  HFFSYIDPVESAEKYTLFRVLAYTGIRRGECLALTWQDINFRQATMTISKTVTQGHGGKQ  243
            +F+++++  + +  Y++FR LA+TG+RRGE +ALTW+DI+F + T++I+KT ++G   K 
Sbjct  181  QFLTFVE--DDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKL  238

Query  244  IIQPPKTSAGKRTIPIDEVTLGHLKHWRHAQQRLYLMMGYNTMAPGQLIFANRVNGYKSL  303
            +IQ PKT ++ RTI+ID+ T + LK WR  Q+   L  G NT    Q +F+  V + K+L
Sbjct  239  VIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTT-VRDNKPL  297

Query  304  --NTPGKWLHTIIDDKPDEFPQITIHKFRHTFTSLMFESGATIKEVQGLLGDADATTVMN  361
              +   K L+ I + ++  F +I +H FRHT  SL+FE+G +I+EVQ+ LG++D  T M+
Sbjct  298  YPEHCNKALDLICEKNS--FKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMD  355

Query  362  VYAHVSKKQQKQASDNFARFMQ  383
            +YAHV+ KQ+ Q +D+FA++++
Sbjct  356  IYAHVTEKQRDQVADKFAKYIN  377

24) EHR_00880 in NC_018081


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  234 bits (871),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 158/388 (41%), Positives = 257/388 (67%), Gaps = 18/388 (4%)

Query  3    MIKQYQKKNGEKAWYFKTYLGIDPLTGKKRYTTKRGFKTQKEAKIALARLELERQKAGMP  62
            MIK+Y+KK+G  A  F +YLG DP+TGK++ TT+RGFKT++EAKIA A+L+ E  + G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  63   ISTNTTFKKAAELWLENYKKTVKESSYSRTKIIFDKHIYPKFGNIKLSKINTAYCQKIVN  122
             +  TTFK   ELWLE+Y++TV+ES+Y R   +FD  I   F ++ + KI  +YCQK++N
Sbjct  61   NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  123  DWSEK-GTSKQYPLFVNYMNKVFKYAINIGLISDNPTLNLIIP-KPQIktekklklytke  180
             W+ K +  K   +   Y ++VFKYA+++ +I DNP  +   P K + + +   K Y+ +
Sbjct  121  KWNKKYSDIKAIRI---YTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSD  177

Query  181  qlelFLSEVSKEQNPYLKNRDYTLFRLLAFSGCRIGEILALTWDNINFKTHEMTIKKTVA  240
            +L  FL+ V  ++  Y     Y++FR LAF+G R GE++ALTW++I+F  + ++I+KT A
Sbjct  178  ELKQFLTFVE-DDPLY-----YAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCA  231

Query  241  RSDKY-YISETPKTKKSNRIIYLDEKTIKQLKFWKLEQR----KYLFQLGFTKANYLFTN  295
            R+ +Y  + + PKTK S+R I +D+KT   LK W+ +QR    KY  + +  K + +FT 
Sbjct  232  RGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTS-DKHQHVFTT  290

Query  296  DENSFTI-NQAVTERYNVYRERAALPYIGLHGFRHTHASMLYEAGADHKEVQERMGHANI  354
              ++  +  +      ++  E+ ++  I +HGFRHTH S+L+EAG   +EVQ+R+GH++I
Sbjct  291  VRDNKPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDI  350

Query  355  KTTMDTYTHITNSKKEETTQKLTNYINF  382
            KTTMD Y+H+T+ ++++ ++K+++YINF
Sbjct  351  KTTMDIYAHVTEKQRDQVADKFAKYINF  378

25) JDM1_0030 in NC_012984


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  232 bits (865),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 160/383 (42%), Positives = 238/383 (63%), Gaps = 8/383 (2%)

Query  4    IKKYQDKDGNTRYQFQVYLGVDPQTGKKKSTRRRGFKSKSAARIALSRIEVELQQEPVLP  63
            IKKY+ KDG+T Y F  YLG DP TGK+K T RRGFK+   A+IA ++++ E+ Q+  L 
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  64   VDNNILFVNVYHEWYDQYINTVRESTWARTAGMFDNHILPLFGNKRLRTITVNQCQRAVN  123
             D    F +VY+ W +QY NTVREST  R   +FD  IL  F +  ++ ITV  CQ+ +N
Sbjct  62   NDITT-FKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  124  LWFKEVTYNYKRWYNYLVAVFEYGLKHGYITHNPARMITMPVKPDSWGDKPDNFWDRDQL  183
             W K  + + K    Y   VF Y++    I +NP      P K ++  D + ++   D+L
Sbjct  121  KWNKKYS-DIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDEL  179

Query  184  KTFFKCIDQQKETEKYCLFRVLAFAGVRRGECLALTWQDIDFVHKNLRVNKTLTQGKRGK  243
            K F+  +++  +   Y +FR LAF+G RRGE +ALTW+DIDF  + + +NKT ++G   K
Sbjct  180  KQFLTFVED--DPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYK  237

Query  244  QIIQAPKTKKGRRTVSLDNTTVEILQRWHKQQREYYLFLGFNTLQPDQLVFANTKNGFKS  303
             +IQ PKTK ++RT+S+D+ T  +L+ W+ +QR   L  G NT + +Q VF+  ++  K+
Sbjct  238  LVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN-KP  296

Query  304  L--NTPGKWLKRIITDYHLTPSITVHGFRHSHASALFAAGATIKEVQTRLGHEDVATTLN  361
            L  +   K L  +I + +    I VHGFRH+H S LF AG +I+EVQ RLGH D+ TT++
Sbjct  297  LYPEHCNKALD-LICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMD  355

Query  362  VYTHVTKGQNQQAANKLANYLGF  384
            +Y+HVT  Q +Q A+K+A+Y+ F
Sbjct  356  IYAHVTEKQRDQVADKFAKYINF  378

26) OB0153 in NC_004193


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  228 bits (851),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 171/393 (44%), Positives = 254/393 (65%), Gaps = 20/393 (5%)

Query  4    IKKYTKKDGTTAYMFNAYLGKDPLtgkkkrttrrgfktkkDANIALSKILVEVDELGIRQ  63
            IKKY KKDG+TAYMF AYLG DP+TGK+KRTTRRGFKT ++A+IA +K+  EV + G+ +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  64   NDQLTFQEVFEEWFKQHRREVKPTTVYAMESKFNRRILPVFGPYKMKDITRSHCQKAING  123
            ND  TF+EV+E W+ Q +  V+ +T   + + F+  IL  F    +K IT + CQK IN 
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  124  WAKELKTFKDYKIQANQVFRYAMKMDMIKRNPMDYVTLPKLKHEMEYVAELEEKKHYYTR  183
            W K    +K  +I +++VF+YA+ + +I  NP      P+ K+     A+ +    YY+ 
Sbjct  122  WNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKE-----AQQDASTKYYSS  176

Query  184  EELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVDFHQKSISLKKTLIYTGGE  243
            +EL+ FL  ++ D + Y+++R L+FTG R+GEL AL W+D+DF +++IS++KT   + G 
Sbjct  177  DELKQFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKT--CARGA  234

Query  244  K---QLQTSKTKASRRIVSVDDETLAILKKWRSKQIQRYLTLELAAPFQSDDKQPIFTVY  300
            +    +Q +KTK+S+R +S+DD T ++LK WR+ Q    L     +   SD  Q +FT  
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNT---SDKHQHVFTTV  291

Query  301  NQLKHE-MDYCRLAYLNDKLERIYQKNPELPQIKVHEFRHTHASLLFAAGASIKDVQSRL  359
             + K    + C     N  L+ I +KN+ + +IKVH FRHTH SLLF AG SI++VQ RL
Sbjct  292  RDNKPLYPEHC-----NKALDLICEKNS-FKRIKVHGFRHTHCSLLFEAGLSIQEVQDRL  345

Query  360  GHTDIQTTMDIYTHVTDEAKEKTAEMFQKYMTF  392
            GH DI+TTMDIY+HVT+  +++ A+ F KY+ F
Sbjct  346  GHGDIKTTMDIYAHVTEKQRDQVADKFAKYINF  378

27) EHR_09400 in NC_018081


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  228 bits (850),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 152/379 (41%), Positives = 232/379 (62%), Gaps = 10/379 (2%)

Query  7    YKKKNGDKAWKFQAYLGINPETGKPVKTTRRNFKTQREAKLALARLQSEYEDNLLKKEKP  66
            YKKK+G  A  F AYLG +P TGK  +TTRR FKT+REAK+A A+LQ+E  +N + ++  
Sbjct  5    YKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLNNDI  64

Query  67   KTYKDVYDLWMTEYKRTVRGSTLLKTERIFKNHVLEELGDIYISEITPIKIQELMDKWAN  126
             T+K+VY+LW+ +Y+ TVR ST  +   +F   +LE++ D+ I  IT    Q +++KW +
Sbjct  65   TTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINKWNK  124

Query  127  RYDTAPKMMNYTGLVFKYAVRFGIIESNPTDAIRKPKRRK-NATVEEPFYDKKQLKLFLD  185
            +Y     +  YT+ VFKYAV + II  NP    + P+++  +      +Y   +LK FL 
Sbjct  125  KYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQFLT  184

Query  186  ELYNQPNLKIQAFFRLLAMTGMRKQEAGALEWRDIDFKDKTVNIYKAVTRTAN-GLEIDT  244
              + + +    A+FR LA TG R+ E  AL W DIDF  +T++I K+ +R AN  L I+ 
Sbjct  185  --FVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVIQE  242

Query  245  TKTVGSSRIISIDQGTLDKLLEWKKVALPPSDDWLIFGHSSAKNPHDIMSLDTSRKWLLN  304
             KT +S R ISID+ T   L  W+        + L +GH+++ + +++ +     K L  
Sbjct  243  PKTKSSHRTISIDDKTASVLKSWRT---HQRVESLKYGHNTSDKHQHVFTTVRDNKPLYP  299

Query  305  Iqdqmd---kkqkkkLPRITVHGFRHTQASLLIEMGASLKEVQFRLGHEDIQTTMNTYAH  361
             + +       +K+ + RI VHGFRHT+ SLL+E G S++EVQ RLGH DI+TTM+ YAH
Sbjct  300  EHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAH  359

Query  362  ISKLAKEQLADKFNKFIDF  380
            ++   ++Q+ADKF K+I+F
Sbjct  360  VTEKQRDQVADKFAKYINF  378

28) EHR_01850 in NC_018081


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  228 bits (849),  Expect = 6e-61, Method: Compositional matrix adjust.
 Identities = 153/375 (41%), Positives = 248/375 (67%), Gaps = 7/375 (1%)

Query  4    ISKYKKKNGQVAWMYKGHIATDPRTGEKINTTRRGFSSKQEAQKDYDEYRHQILYGVKKK  63
            I KYKKK+G  A M+ + ++TDP TG +  TTRRGF + +EA+      + ++      +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  64   APDMTFEDLYNEWITHQRTSVKASTIAISVRYANNQILPAFGKLKLSNISVPYCQKVVDE  123
                TF ++Y+ W+ + + +V+ ST    +   +  IL  F  + + +I+VPYCQKV++ 
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  124  WHSKYESYDYMRKQTAQILRYGVAMQYIDNNPMEKTLLPRKKEYEKN--RKFYSKEELNN  181
            W+ KY     +R  T+++++Y+V+++ I +NP   T  PRKKE +++   K+YS +EL++
Sbjct  122  WNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQ  181

Query  182  LLDAFKDFGNMKQYAFFRLLAYTGMRKSEVLALQWKDIDTFNKELHVNKTLAVDEFGKVI  241
            +L +F + ++   YA+FR LA+TG R++E++AL W+DID  ++ + +NKT A +   K++
Sbjct  182  FL-TFVE-DDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLV  239

Query  242  IQSPKTRASRRVISLDTETLSILNNWKLQQKEEYLKLGYNTSSKEQHVFTTVKN--TLYI  299
            IQ PKT++S+R IS+D  T S+L++W+ +Q+ E LK G NTS K+QHVFTTV++   LY 
Sbjct  240  IQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLY-  298

Query  300  PNTVNDWLRYILKKYNLPRITPHGFRHTHASLLLEAGESVKVVQQRLGHENSKVTLDIYA  359
            P+  N  L  I  K ++ RI  HGFRHTH SLL+EAG S++ VQ+RLGH + K T+DIYA
Sbjct  299  PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYA  358

Query  360  HITNNAPKKTGQDFA  374
            H+T++   + ++ FA
Sbjct  359  HVTEKQRDQVADKFA  373

29) TEH_08260 in NC_016052


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  227 bits (847),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 163/391 (42%), Positives = 239/391 (62%), Gaps = 19/391 (4%)

Query  7    IKEYKIANGETRYKFKVYLGINPYTGKEVRPNRRGFKTRREASIELKRLKANWLEDIESQ  66
            IK YK  +G T Y F  YLG +P TGK+ R  RRGFKT REA I   +L++   E  ++ 
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQT---EVSQNG  58

Query  67   YNKQKELENKGKTFEEVYDIWLDEYIPNVDKSTLFKTKQLFDNHILPAFGNLYIKDITAM  126
            +     L+N   TF EVY++WL++Y   V  ST  +   LFD  IL  F ++ IK IT  
Sbjct  59   F-----LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVP  113

Query  127  DAQKQMNAWQKEFVKASTIMSYAGLVFDCAVRLEEISSNPISAIRkpskkkeskkDASFN  186
              QK +N W+K +    +I  Y++ VF  AV L  I  NP++  + P KK   + DAS +
Sbjct  114  YCQKVINKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQ-DASTK  172

Query  187  FYDKEELKEFMAAAEMSSNKKAYVFFRLLAFTGIRRGEILALRWYDIDFNEQTLSINKAI  246
            +Y  +ELK+F++  E   +   Y +FR LAFTG+RRGE++AL W DIDF  QT+SINK+ 
Sbjct  173  YYSSDELKQFLTFVE--DDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTC  230

Query  247  AHSET-GLYEKDVKTKASNRVISIDDITTKILKEFQGVSDKEVRIFPAENGG----ILSP  301
            A++    L  ++ KTK+S+R ISIDD T+ +LK  +     E   +  + ++    +++ 
Sbjct  231  ARGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTT  290

Query  302  AKPRKWLYTIQNYIDKKRKENEEDAKPMKRITTHGFRHTHASLLFEAGASIKDVQYRLGH  361
             +  K LY  +    +K  +   + ++ KRI  HGFRHTH SLLFEAG SI++VQ RLGH
Sbjct  291  VRDNKPLYPEHC---NKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGH  347

Query  362  SDIKTTMDTYTHVTKQAKENLANNFNDYVDF  392
            +DIKTTMD Y+HVT + ++++A++F  Y++F
Sbjct  348  GDIKTTMDIYAHVTEKQRDQVADKFAKYINF  378

30) xerC in NC_017022


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  227 bits (847),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 153/375 (41%), Positives = 248/375 (67%), Gaps = 7/375 (1%)

Query  17   ISKYKKKNGQVAWMYKGHIATDPRTGEKINTTRRGFSSKQEAQKDYDEYRHQILYGVKKK  76
            I KYKKK+G  A M+ + ++TDP TG +  TTRRGF + +EA+      + ++      +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  77   APDMTFEDLYNEWITHQRTSVKASTIAISVRYANNQILPAFGKLKLSNISVPYCQKVVDE  136
                TF ++Y+ W+ + + +V+ ST    +   +  IL  F  + + +I+VPYCQKV++ 
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  137  WHSKYESYDYMRKQTAQILRYGVAMQYIDNNPMEKTLLPRKKEYEKN--RKFYSKEELNN  194
            W+ KY     +R  T+++++Y+V+++ I +NP   T  PRKKE +++   K+YS +EL++
Sbjct  122  WNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQ  181

Query  195  LLDAFKDFGNMKQYAFFRLLAYTGMRKSEVLALQWKDIDTFNKELHVNKTLAVDEFGKVI  254
            +L +F + ++   YA+FR LA+TG R++E++AL W+DID  ++ + +NKT A +   K++
Sbjct  182  FL-TFVE-DDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLV  239

Query  255  IQSPKTRASRRVISLDTETLSILNNWKLQQKEEYLKLGYNTSSKEQHVFTTVKN--TLYI  312
            IQ PKT++S+R IS+D  T S+L++W+ +Q+ E LK G NTS K+QHVFTTV++   LY 
Sbjct  240  IQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLY-  298

Query  313  PNTVNDWLRYILKKYNLPRITPHGFRHTHASLLLEAGESVKVVQQRLGHENSKVTLDIYA  372
            P+  N  L  I  K ++ RI  HGFRHTH SLL+EAG S++ VQ+RLGH + K T+DIYA
Sbjct  299  PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYA  358

Query  373  HITNNAPKKTGQDFA  387
            H+T++   + ++ FA
Sbjct  359  HVTEKQRDQVADKFA  373

31) xerC in NC_021994


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  227 bits (847),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 153/375 (41%), Positives = 248/375 (67%), Gaps = 7/375 (1%)

Query  17   ISKYKKKNGQVAWMYKGHIATDPRTGEKINTTRRGFSSKQEAQKDYDEYRHQILYGVKKK  76
            I KYKKK+G  A M+ + ++TDP TG +  TTRRGF + +EA+      + ++      +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  77   APDMTFEDLYNEWITHQRTSVKASTIAISVRYANNQILPAFGKLKLSNISVPYCQKVVDE  136
                TF ++Y+ W+ + + +V+ ST    +   +  IL  F  + + +I+VPYCQKV++ 
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  137  WHSKYESYDYMRKQTAQILRYGVAMQYIDNNPMEKTLLPRKKEYEKN--RKFYSKEELNN  194
            W+ KY     +R  T+++++Y+V+++ I +NP   T  PRKKE +++   K+YS +EL++
Sbjct  122  WNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQ  181

Query  195  LLDAFKDFGNMKQYAFFRLLAYTGMRKSEVLALQWKDIDTFNKELHVNKTLAVDEFGKVI  254
            +L +F + ++   YA+FR LA+TG R++E++AL W+DID  ++ + +NKT A +   K++
Sbjct  182  FL-TFVE-DDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLV  239

Query  255  IQSPKTRASRRVISLDTETLSILNNWKLQQKEEYLKLGYNTSSKEQHVFTTVKN--TLYI  312
            IQ PKT++S+R IS+D  T S+L++W+ +Q+ E LK G NTS K+QHVFTTV++   LY 
Sbjct  240  IQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLY-  298

Query  313  PNTVNDWLRYILKKYNLPRITPHGFRHTHASLLLEAGESVKVVQQRLGHENSKVTLDIYA  372
            P+  N  L  I  K ++ RI  HGFRHTH SLL+EAG S++ VQ+RLGH + K T+DIYA
Sbjct  299  PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYA  358

Query  373  HITNNAPKKTGQDFA  387
            H+T++   + ++ FA
Sbjct  359  HVTEKQRDQVADKFA  373

32) HMPREF0351_10594 in NC_017960


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  227 bits (847),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 153/375 (41%), Positives = 248/375 (67%), Gaps = 7/375 (1%)

Query  17   ISKYKKKNGQVAWMYKGHIATDPRTGEKINTTRRGFSSKQEAQKDYDEYRHQILYGVKKK  76
            I KYKKK+G  A M+ + ++TDP TG +  TTRRGF + +EA+      + ++      +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  77   APDMTFEDLYNEWITHQRTSVKASTIAISVRYANNQILPAFGKLKLSNISVPYCQKVVDE  136
                TF ++Y+ W+ + + +V+ ST    +   +  IL  F  + + +I+VPYCQKV++ 
Sbjct  62   NDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINK  121

Query  137  WHSKYESYDYMRKQTAQILRYGVAMQYIDNNPMEKTLLPRKKEYEKN--RKFYSKEELNN  194
            W+ KY     +R  T+++++Y+V+++ I +NP   T  PRKKE +++   K+YS +EL++
Sbjct  122  WNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQ  181

Query  195  LLDAFKDFGNMKQYAFFRLLAYTGMRKSEVLALQWKDIDTFNKELHVNKTLAVDEFGKVI  254
            +L +F + ++   YA+FR LA+TG R++E++AL W+DID  ++ + +NKT A +   K++
Sbjct  182  FL-TFVE-DDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLV  239

Query  255  IQSPKTRASRRVISLDTETLSILNNWKLQQKEEYLKLGYNTSSKEQHVFTTVKN--TLYI  312
            IQ PKT++S+R IS+D  T S+L++W+ +Q+ E LK G NTS K+QHVFTTV++   LY 
Sbjct  240  IQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLY-  298

Query  313  PNTVNDWLRYILKKYNLPRITPHGFRHTHASLLLEAGESVKVVQQRLGHENSKVTLDIYA  372
            P+  N  L  I  K ++ RI  HGFRHTH SLL+EAG S++ VQ+RLGH + K T+DIYA
Sbjct  299  PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYA  358

Query  373  HITNNAPKKTGQDFA  387
            H+T++   + ++ FA
Sbjct  359  HVTEKQRDQVADKFA  373

33) STP_1281 in NC_015558


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  221 bits (822),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 171/386 (45%), Positives = 242/386 (63%), Gaps = 31/386 (8%)

Query  1    MITKYTKKDGSTAYKLQAYLGVDQSTGKQVRTTRQGFKTIKQAKRAEVKLVEDFNRQGVW  60
            MI KY KKDGSTAY + AYLG D  TGKQ RTTR+GFKT ++AK AE KL  + +++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGF-  59

Query  61   KNNDKTTFDEVAQLWLEQYANTVKASTYLTTLNYYNSKIATTIGHLPIAKITILKLQKLV  120
             NND TTF EV +LWLEQY NTV+ STY   L  +++ I   + ++PI KIT+   QK++
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  NDLSKWSCYGLYISI------INRIFKYAVNLGVLDSNPMDKTIRAKIKHVPKSEQTENY  174
            N   KW+    Y  I       + +FKYAV+L ++  NP   T +A  K  ++ + + +Y
Sbjct  120  N---KWN--KKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHT-KAPRKKEAQQDASTKY  173

Query  175  YTKDELLTFLEAVKNQESIELFAFYRLLSFGGLRFGEAVALNDADFDFKNKTVSITKTIA  234
            Y+ DEL  FL  V  ++    +A++R L+F G+R GE +AL   D+DF ++T+SI KT A
Sbjct  174  YSSDELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCA  231

Query  235  NTKN-GLVIQKPKTKKSIREISLDDETMRIIKTY-INQSIKPL---HGPF----RLFN-I  284
               N  LVIQ PKTK S R IS+DD T  ++K+   +Q + +L   H       ++F  +
Sbjct  232  RGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTV  291

Query  285  TANGAIYR------LDKIIKKNNFKRITHHGFRHTHASLLFEAGVPAKLTQQRLGHAKIS  338
              N ++Y       LD I  KN+FKRI  HGFRHTH SLLFEAG++ +  Q+RLGH+ I 
Sbjct  292  RDNKPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIK  351

Query  339  ITLDLYTHLSKTQKDEVANKFVDFIA  364
             T+D+Y+H++  Q+D+VA+KF  +I 
Sbjct  352  TTMDIYAHVTEKQRDQVADKFAKYIN  377

34) SAIL_6830 in NC_021507


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  209 bits (779),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 168/386 (44%), Positives = 241/386 (63%), Gaps = 31/386 (8%)

Query  1    MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAW  60
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK AE KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNG-F  59

Query  61   KSNDKTTFNDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFV  120
             +ND TTF++V  LW+EQYQNTV+ ST+      + T +  H+ ++ + KITV  CQK +
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  NCLSR-YSGYTLYLSLANRIFKFAVNLGIIDSNPM--SKTLRSKCTYKNVDTLTKKYYTK  177
            N  ++ YS+       ++ +FK+AV+L II  NP   +K+ R K      +  + KYY+ 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  178  EELNTFLRIVEAEESLEMRLIYRLLSYGGFRIGELMALKDTDFEFRNNTISITKTIAYTK  237
            +EL+ FL +VE +++L    I+R L++ GFR GELMAL   D++F ++TISI KT A   
Sbjct  177  DELKQFLTFVE-DDPLYY-AIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  238  E-GWAVQSPKTKKSNRTISMDAETMSLAKL-----------YIKQSIKPLHGSFK-----  280
            +    +Q PKTK S+RTIS+D  T S+ K            Y  ++    +  F      
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  281  --LFNFACDTVRKRLDKFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIA  338
              L+   C+   K LD +  K+++KRI  HGFRHTH SLLFEAG++ +  Q+RLGH+ I 
Sbjct  295  KPLYPEHCN---KALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIK  351

Query  339  ITMDLYTHLSKKSKDDVADKLAELVA  364
             TMD+Y+H++ K +D+VADK+A  + 
Sbjct  352  TTMDIYAHVTEKQRDQVADKFAKYIN  377

35) L897_07765 in NC_021807


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  209 bits (778),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 165/386 (43%), Positives = 235/386 (61%), Gaps = 31/386 (8%)

Query  20   MIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAW  79
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK AE KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNG-F  59

Query  80   KSNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFV  139
             +ND TTF +V  LW+EQYQNTV+ ST+      + T +  H+ ++ + KITV  CQK +
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  140  NCLSR-YSGYTLYLSLANRIFKFAVNLGIIDNNPM--NKTLRSKCTYKNVDTLTKKYYTK  196
            N  ++ YS+       ++ +FK+AV+L II +NP    K+ R K      +  + KYY+ 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  197  EELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELMALKDTDFEFHNNTISITKTIAYTK  256
            +EL+ FL +VE +       I+R L++ GFR GELMAL   D++F ++TISI KT A   
Sbjct  177  DELKQFLTFVEDDPLYYA--IFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  257  E-GWAVQSPKTKKSTRAISMDAETMSLAKL-----------YIKQSIKPLHGSFK-----  299
            +    +Q PKTK S R+IS+D  T S+ K            Y  ++    +  F      
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  300  --LFNFSCDTVRNRLDKLILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIA  357
              L+   C+     LD +  K+++KRI  HGFRHTH SLLFEAG++ +  Q+RLGH+ I 
Sbjct  295  KPLYPEHCNKA---LDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIK  351

Query  358  ITMDLYTHLSKKSKDDVADKLAELVA  383
             TMD+Y+H++ K +D+VADK+A  + 
Sbjct  352  TTMDIYAHVTEKQRDQVADKFAKYIN  377

36) MSA_7080 in NC_021486


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  209 bits (777),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 167/386 (44%), Positives = 240/386 (63%), Gaps = 31/386 (8%)

Query  20   MIEKYTKKDGTIAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAW  79
            MI KY KKDG+ AY + AYLG DP+TGKQ RTTR+GFKTEREAK AE KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNG-F  59

Query  80   KSNDKTTFNDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFV  139
             +ND TTF++V  LW+EQYQNTV+ ST+      + T +  H+ ++ + KITV  CQK +
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  140  NCLSR-YSGYTLYLSLANRIFKFAVNLGIIDSNPM--SKTLRSKCTYKNVDTLTKKYYTK  196
            N  ++ YS+       ++ +FK+AV+L II  NP   +K+ R K      +  + KYY+ 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  197  EELNTFLRIVEAEESLEMRLIYRLLSYGGFRIGELMALKDTDFEFRNNTISITKTIAYTK  256
            +EL+ FL +VE +++L    I+R L++ GFR GELMAL   D++F ++TISI KT A   
Sbjct  177  DELKQFLTFVE-DDPLYY-AIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  257  E-GWAVQSPKTKKSNRTISMDAETMSLAKL-----------YIKQSIKPLHGSFK-----  299
            +    +Q PKTK S+RTIS+D  T S+ K            Y  ++    +  F      
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  300  --LFNFACDTVRKRLDKFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIA  357
              L+   C+   K LD +  K+++KRI  HGFRHTH SLLFEAG++ +  Q+RLGH+ I 
Sbjct  295  KPLYPEHCN---KALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIK  351

Query  358  ITMDLYTHLSKKSKDDVADKLAELVA  383
             TMD+Y+H++ K +D+VADK+A  + 
Sbjct  352  TTMDIYAHVTEKQRDQVADKFAKYIN  377

37) int1 in NC_008022


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  208 bits (773),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 169/383 (45%), Positives = 238/383 (63%), Gaps = 25/383 (6%)

Query  21   MIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAW  80
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK AE KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNG-F  59

Query  81   KSNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFV  140
             +ND TTF +V  LW+EQYQNTV+ ST+      + T +  H+ ++ + KITV  CQK +
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  141  NCLSR-YSGYTLYLSLANRIFKFAVNLGIIDNNPM--NKTLRSKCTYKNVDTLTKKYYTK  197
            N  ++ YS+       ++ +FK+AV+L II +NP    K+ R K      +  + KYY+ 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  198  EELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFDFRNNTISITKTIAYTK  257
            +EL+ FL +VE +       I+R L++ GFR GEL+AL   D+DF ++TISI KT A   
Sbjct  177  DELKQFLTFVEDDPLYYA--IFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  258  E-GWAVQSPKTKKSNRTISMDAETMSLAKLY-IKQSIKPL---HGSFKLFNFASDTVR--  310
            +    +Q PKTK S+RTIS+D  T S+ K     Q + +L   H +    +    TVR  
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  311  ---------KRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITM  361
                     K LD +  K+++KRI  HGFRHTH SLLFEAG++ +  Q+RLGH+ I  TM
Sbjct  295  KPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM  354

Query  362  DLYTHLSKKSKDNVADKLAELVA  384
            D+Y+H++ K +D+VADK+A  + 
Sbjct  355  DIYAHVTEKQRDQVADKFAKYIN  377

38) M28_Spy1285 in NC_007296


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  208 bits (773),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 169/383 (45%), Positives = 238/383 (63%), Gaps = 25/383 (6%)

Query  21   MIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAW  80
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK AE KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNG-F  59

Query  81   KSNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFV  140
             +ND TTF +V  LW+EQYQNTV+ ST+      + T +  H+ ++ + KITV  CQK +
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  141  NCLSR-YSGYTLYLSLANRIFKFAVNLGIIDNNPM--NKTLRSKCTYKNVDTLTKKYYTK  197
            N  ++ YS+       ++ +FK+AV+L II +NP    K+ R K      +  + KYY+ 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  198  EELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFDFRNNTISITKTIAYTK  257
            +EL+ FL +VE +       I+R L++ GFR GEL+AL   D+DF ++TISI KT A   
Sbjct  177  DELKQFLTFVEDDPLYYA--IFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  258  E-GWAVQSPKTKKSNRTISMDAETMSLAKLY-IKQSIKPL---HGSFKLFNFASDTVR--  310
            +    +Q PKTK S+RTIS+D  T S+ K     Q + +L   H +    +    TVR  
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  311  ---------KRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITM  361
                     K LD +  K+++KRI  HGFRHTH SLLFEAG++ +  Q+RLGH+ I  TM
Sbjct  295  KPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM  354

Query  362  DLYTHLSKKSKDNVADKLAELVA  384
            D+Y+H++ K +D+VADK+A  + 
Sbjct  355  DIYAHVTEKQRDQVADKFAKYIN  377

39) int315.4 in NC_004070


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  208 bits (773),  Expect = 6e-55, Method: Compositional matrix adjust.
 Identities = 169/383 (45%), Positives = 238/383 (63%), Gaps = 25/383 (6%)

Query  20   MIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAW  79
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK AE KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNG-F  59

Query  80   KSNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFV  139
             +ND TTF +V  LW+EQYQNTV+ ST+      + T +  H+ ++ + KITV  CQK +
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  140  NCLSR-YSGYTLYLSLANRIFKFAVNLGIIDNNPM--NKTLRSKCTYKNVDTLTKKYYTK  196
            N  ++ YS+       ++ +FK+AV+L II +NP    K+ R K      +  + KYY+ 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  197  EELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFDFRNNTISITKTIAYTK  256
            +EL+ FL +VE +       I+R L++ GFR GEL+AL   D+DF ++TISI KT A   
Sbjct  177  DELKQFLTFVEDDPLYYA--IFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  257  E-GWAVQSPKTKKSNRTISMDAETMSLAKLY-IKQSIKPL---HGSFKLFNFASDTVR--  309
            +    +Q PKTK S+RTIS+D  T S+ K     Q + +L   H +    +    TVR  
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  310  ---------KRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITM  360
                     K LD +  K+++KRI  HGFRHTH SLLFEAG++ +  Q+RLGH+ I  TM
Sbjct  295  KPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM  354

Query  361  DLYTHLSKKSKDNVADKLAELVA  383
            D+Y+H++ K +D+VADK+A  + 
Sbjct  355  DIYAHVTEKQRDQVADKFAKYIN  377

40) SPs0597 in NC_004606


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  208 bits (773),  Expect = 6e-55, Method: Compositional matrix adjust.
 Identities = 169/383 (45%), Positives = 238/383 (63%), Gaps = 25/383 (6%)

Query  20   MIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAW  79
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK AE KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNG-F  59

Query  80   KSNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFV  139
             +ND TTF +V  LW+EQYQNTV+ ST+      + T +  H+ ++ + KITV  CQK +
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  140  NCLSR-YSGYTLYLSLANRIFKFAVNLGIIDNNPM--NKTLRSKCTYKNVDTLTKKYYTK  196
            N  ++ YS+       ++ +FK+AV+L II +NP    K+ R K      +  + KYY+ 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  197  EELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFDFRNNTISITKTIAYTK  256
            +EL+ FL +VE +       I+R L++ GFR GEL+AL   D+DF ++TISI KT A   
Sbjct  177  DELKQFLTFVEDDPLYYA--IFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  257  E-GWAVQSPKTKKSNRTISMDAETMSLAKLY-IKQSIKPL---HGSFKLFNFASDTVR--  309
            +    +Q PKTK S+RTIS+D  T S+ K     Q + +L   H +    +    TVR  
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  310  ---------KRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITM  360
                     K LD +  K+++KRI  HGFRHTH SLLFEAG++ +  Q+RLGH+ I  TM
Sbjct  295  KPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTM  354

Query  361  DLYTHLSKKSKDNVADKLAELVA  383
            D+Y+H++ K +D+VADK+A  + 
Sbjct  355  DIYAHVTEKQRDQVADKFAKYIN  377

41) M6_Spy0020 in NC_006086


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  206 bits (767),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 167/381 (44%), Positives = 240/381 (63%), Gaps = 22/381 (5%)

Query  1    MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRTEVKLVDDFQRQGAW  60
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK +E KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGF-  59

Query  61   KNNDKTTFDDAARLWFEQYKNTVKPSTFLVNQNYYKSTIKPHIGKSQISKITVMACQNLI  120
             NND TTF +   LW+EQY+NTV+ ST+      + ++I  H+    I KITV  CQ++I
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  NHLAQ-YSACASYISVINRIFKFAVHLGIIENNPMDRTIRARCTYAHKE--KMFYSKEEL  177
            N   + YS   +     + +FK+AV L II +NP  +T  +R   A+++    +YS +EL
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDEL  179

Query  178  LIFLDIVKKEESLEMLLIYRLLAYGGLRIGEAVALYDTDFDFTNNTISITKTLAQTKAGK  237
              FL +V  +++L    I+R LA+ G+R GE +AL   D+DFT++TISI KT A+    K
Sbjct  180  KQFLTFVE-DDPL-YYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYK  237

Query  238  -VIQNPKTKKSSRTISMDQETMRLAKEY-MRQSVRPL---HGSF----RVFN-------L  281
             VIQ+PKTK S RTIS+D+ T  + K    +Q V +L   H +     +VF        L
Sbjct  238  LVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPL  297

Query  282  LTSTVRRRLKRTVERHHLKKINPHGFRHTHASLLFEAGVPAKLAQERLGHAKISITMDLY  341
                  + L    E++ +K+I+ HGFRHTH SLLFEAG++ +  Q+RLGH+ I  TMD+Y
Sbjct  298  YPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIY  357

Query  342  THLSKNQTDNVAEKLADFIAI  362
            +H++ +Q D+VA+K+A +I +
Sbjct  358  AHVTEKQRDQVADKFAKYINF  378

42) int315.6 in NC_004070


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  206 bits (767),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 167/381 (44%), Positives = 240/381 (63%), Gaps = 22/381 (5%)

Query  1    MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRTEVKLVDDFQRQGAW  60
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK +E KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGF-  59

Query  61   KNNDKTTFDDAARLWFEQYKNTVKPSTFLVNQNYYKSTIKPHIGKSQISKITVMACQNLI  120
             NND TTF +   LW+EQY+NTV+ ST+      + ++I  H+    I KITV  CQ++I
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  NHLAQ-YSACASYISVINRIFKFAVHLGIIENNPMDRTIRARCTYAHKE--KMFYSKEEL  177
            N   + YS   +     + +FK+AV L II +NP  +T  +R   A+++    +YS +EL
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDEL  179

Query  178  LIFLDIVKKEESLEMLLIYRLLAYGGLRIGEAVALYDTDFDFTNNTISITKTLAQTKAGK  237
              FL +V  +++L    I+R LA+ G+R GE +AL   D+DFT++TISI KT A+    K
Sbjct  180  KQFLTFVE-DDPL-YYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYK  237

Query  238  -VIQNPKTKKSSRTISMDQETMRLAKEY-MRQSVRPL---HGSF----RVFN-------L  281
             VIQ+PKTK S RTIS+D+ T  + K    +Q V +L   H +     +VF        L
Sbjct  238  LVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPL  297

Query  282  LTSTVRRRLKRTVERHHLKKINPHGFRHTHASLLFEAGVPAKLAQERLGHAKISITMDLY  341
                  + L    E++ +K+I+ HGFRHTH SLLFEAG++ +  Q+RLGH+ I  TMD+Y
Sbjct  298  YPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIY  357

Query  342  THLSKNQTDNVAEKLADFIAI  362
            +H++ +Q D+VA+K+A +I +
Sbjct  358  AHVTEKQRDQVADKFAKYINF  378

43) SPs0408 in NC_004606


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  206 bits (767),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 167/381 (44%), Positives = 240/381 (63%), Gaps = 22/381 (5%)

Query  1    MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRTEVKLVDDFQRQGAW  60
            MI KY KKDG+TAY + AYLG DP+TGKQ RTTR+GFKTEREAK +E KL  +  ++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGF-  59

Query  61   KNNDKTTFDDAARLWFEQYKNTVKPSTFLVNQNYYKSTIKPHIGKSQISKITVMACQNLI  120
             NND TTF +   LW+EQY+NTV+ ST+      + ++I  H+    I KITV  CQ++I
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  NHLAQ-YSACASYISVINRIFKFAVHLGIIENNPMDRTIRARCTYAHKE--KMFYSKEEL  177
            N   + YS   +     + +FK+AV L II +NP  +T  +R   A+++    +YS +EL
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDEL  179

Query  178  LIFLDIVKKEESLEMLLIYRLLAYGGLRIGEAVALYDTDFDFTNNTISITKTLAQTKAGK  237
              FL +V  +++L    I+R LA+ G+R GE +AL   D+DFT++TISI KT A+    K
Sbjct  180  KQFLTFVE-DDPL-YYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYK  237

Query  238  -VIQNPKTKKSSRTISMDQETMRLAKEY-MRQSVRPL---HGSF----RVFN-------L  281
             VIQ+PKTK S RTIS+D+ T  + K    +Q V +L   H +     +VF        L
Sbjct  238  LVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPL  297

Query  282  LTSTVRRRLKRTVERHHLKKINPHGFRHTHASLLFEAGVPAKLAQERLGHAKISITMDLY  341
                  + L    E++ +K+I+ HGFRHTH SLLFEAG++ +  Q+RLGH+ I  TMD+Y
Sbjct  298  YPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIY  357

Query  342  THLSKNQTDNVAEKLADFIAI  362
            +H++ +Q D+VA+K+A +I +
Sbjct  358  AHVTEKQRDQVADKFAKYINF  378

44) STP_1303 in NC_015558


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  200 bits (743),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 241/387 (63%), Gaps = 31/387 (8%)

Query  1    MITKYTKKDGSTAYKLQAYLGVDQSTGKQVRTTRQGFKTIKEAKRAEVKLVEDFNRQGVW  60
            MI KY KKDGSTAY + AYLG D  TGKQ RTTR+GFKT +EAK AE KL  + +++G  
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGF-  59

Query  61   KNSDKTTFDEVAQLWFEQYANTVRESTYTTSLYNYNKKIKPFLGNKCINKINVMICQKLI  120
             N+D TTF EV +LW+EQY NTVRESTY   L  ++  I   + +  I+KI V  CQK+I
Sbjct  60   LNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  NQLANHAAYMSYISV-INRIFKFAINIGIIDLNPMDKTIRAKNTHIAKSETKNNFYSKEE  179
            N+  +  + +  I +  + +FK+A+++ II  NP   T  +++ + A+ ++  ++YS +E
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKE-AQQDASTKYYSSDE  178

Query  180  FQKFLDKADEIYGLEMLVY--FRILGFGGLRNGEALVLQDSDFDFKNNTISINKTNAYAM  237
            +++FL   ++    + L Y  FR L+F G+R GE + L  +D+DF ++TISINKT A + 
Sbjct  179  LKQFLTFVED----DPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  238  H-GLMINKPKTKKSNRVVSMDIETMRLAK-----------KYIRQSIKPLHETF------  279
            +  L+I+ PKTK S+R +S+D  T  + K           KY +++    ++ F      
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  280  -RLYNYTPQTIAFRIKKVADSAGLKRISPHGLRHTHASLLFEAGIPAKVIQERLGHSKIS  338
              LY   P+     +  + +  ++KRI  HG+RHTH SLLFEAG++ + +Q+RLGH+ I 
Sbjct  295  KPLY---PEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIK  351

Query  339  MTLDTYTHLSKSQTDDTANQLAKFIAL  365
             T+D Y+H++  Q D+ A+++AK+I +
Sbjct  352  TTMDIYAHVTEKQRDQVADKFAKYINF  378

45) LSA0586 in NC_007576


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  196 bits (726),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 166/388 (43%), Positives = 246/388 (64%), Gaps = 17/388 (4%)

Query  4    IKKYTK-DNQEFYMFQAYLGINPQtgkekrttrrgfktrkeARLALSMLELQADSGQLDQ  62
            IKKY K D    YMF AYLG +P TGK+KRTTRRGFKT +EA++A + L+ +     + +
Sbjct  2    IKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLN  61

Query  63   QPINLTFEDVYQQWWAGYINTVRESTMYKQKKVFQNHILPAFGKYRIRTITTSQVQTTLN  122
            + I  TF +VY+ W   Y NTVREST  +   +F+  IL  F    I+ IT +  Q  +N
Sbjct  62   NDIT-TFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN  120

Query  123  KWFKQTDYS-FKPWFNYTSAIFKYAILQGYIKDNPCTRVTMPKKLD--KEDTLNFWDKDQ  179
            KW  +  YS +K+   YTS +FKYA+    I DNP ++   P+K +  ++ + ++   D+
Sbjct  121  KW--NKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDE  178

Query  180  LKTF--FNGIDPVNDLEKYTLFRVLAFTGIRRGECLSLTWDDLNVQKATLDINKTLTHGD  237
            LK F  F   DP+     Y++FR LAFTG+RRGE ++LTW+D++  K T+ INKT ++G 
Sbjct  179  LKQFLTFVEDDPLY----YAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  238  KGRLLIQPTKTKKGTRVISLDESTLLYLKKWHLEQRRMYLMLGYNINKSNQLIFATSKNT  297
            + +L+IQ  KTK + R IS+D+ T   LK W+ +QR   L  G N +  +Q +F+T ++ 
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  FKSLNTPSKWLRALIDDANKSGANLPSITVHGFRHSHASALFSAGASIKEVQERLGHEDA  357
             K+L  P    +AL    +K++  +  I VHGFRH+H S LF AG SI+EVQ+RLGH D 
Sbjct  295  -KPLY-PEHCNKALDLICEKNS--FKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDI  350

Query  358  QTTLNIYTHVTEKQGQEAVQKLVNFLNF  385
            +TT++IY+HVTEKQ ++  +K+ +++NF
Sbjct  351  KTTMDIYAHVTEKQRDQVADKFAKYINF  378

46) SSU05_1529 in NC_009442


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  192 bits (714),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 139/342 (41%), Positives = 205/342 (60%), Gaps = 14/342 (4%)

Query  1    MINQYQLKDGSIRYSYIAYVGIDPLTGKEKRVRKRGFKTKKEAKIAESQLLLKVEQDGFF  60
            MI++Y+ KDGS  Y ++AY+G DP+TGK+KR  +RGFKT +EAKIAE++L   V Q+GF+
Sbjct  1    MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFL  60

Query  61   DKPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIVPVFGACYVDKISLPMCQKQA  120
            ++ D  TF EVY +WLE+Y+NTV+ STY R  +  D  I+  F    + KI++P CQK  
Sbjct  61   NN-DITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVI  119

Query  121  QEWFKGYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIKPRKSSEVDeeekkkeNFYSR  180
            + W K Y     +   T  V+ +AV+L  I DNP      PRK    + ++    ++YS 
Sbjct  120  NKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKK---EAQQDASTKYYSS  176

Query  181  EDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLALRWKDLDLFTSRLSVSQIVAYGE  240
            ++L++FL  V  ED      IFR LAFTG R++E++AL W+D+D+    +S+++  A G 
Sbjct  177  DELKQFLTFV--EDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGA  234

Query  241  NNSIVYQTPKTKKSKRTITLDPITVSILKKWEKTR--QFLNFPQRVKPT-DLVFPAETGN  297
            N  +V Q PKTK S RTI++D  T S+LK W   +  + L++ +      + VF +  +N
Sbjct  235  NYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDN  294

Query  298  AHSFD---YINYNLRCILKKYDLPYITPHGFRHTHCSLLFEA  336
               +        +L C  + +    I  HGFRHTHCSLLFEA
Sbjct  295  KPLYPEHCNKALDLICEKNSFKR--IKVHGFRHTHCSLLFEA  334

47) LAC30SC_02060 in NC_015214


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  180 bits (667),  Expect = 9e-47, Method: Compositional matrix adjust.
 Identities = 111/268 (42%), Positives = 181/268 (68%), Gaps = 7/268 (2%)

Query  26   PFKCQRVAQKWALELPKTFNTLIIYSNKLLDYAVRFDYIRKNPMI---IKPKKQAEHKEF  82
            P+ CQ+V +KW    +  ++++ IY+++++ YAV +  I  NP        KK+A++   
Sbjct  113  PY-CQKVINKWNKKYS-DIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDAS  170

Query  83   TDFYTKQELNAFLKASKNENIKIYTFFRLLAYSGMRKGEALALKWSDIDFTSNTISINKT  142
            T +Y+ +EL+ FL    ++ +  Y++FR LA++G R+GE +AL W+DIDFT +TISINKT
Sbjct  171  TKYYSSDELKQFLTFVEDDPL-YYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKT  229

Query  143  VSIGNKHRVVVNNTTKTKRNRAISMDARTMQLLKEWRFQQRRYLLQLGFNPFDKEQVVFQ  202
             + G + ++V+++      +R+IS+D +T  +LK WR +QR   L+ G N  DK+Q VF 
Sbjct  230  CARGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFT  289

Query  203  NF-DNEVVRPNLVAVWNKRICDKNGLRRIKTHGFRHTHASLLFDAGVPMEDVKQRLGHAS  261
               DN  + P+        IC+KN+++RIK HGFRHTH SLLF+AG+++++V++RLGH+ 
Sbjct  290  TVRDNKPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGD  349

Query  262  IQTTMDIYTHVTKEKQDKTALSFAQYME  289
            I+TTMDIY+HVT  ++D+ A  FA+Y++
Sbjct  350  IKTTMDIYAHVTEKQRDQVADKFAKYIN  377

48) BL01373 in NC_006270


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  172 bits (638),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 125/310 (41%), Positives = 187/310 (61%), Gaps = 12/310 (3%)

Query  55   IDNNALARNDIT-FEDVFKEWWDVHSKTIKRSTRYRKLSNFKKHILPHFGKLKIKDITRA  113
            + +N++  NDIT F +V+  W +   +T++ ST  R L+ F   IL HF  + IK IT +
Sbjct  54   VSQNGFLNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVP  113

Query  114  YCQKVINLIAQDIDSVQNVKIQANLVFKYALRMEYITKNPMEFVVIPKKEENFLSQEEEK  173
            YCQKVIN   +    ++ ++I ++ VFKYA+ +  I  NP      P+K E   +Q++  
Sbjct  114  YCQKVINKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKE---AQQDAS  170

Query  174  RNFWEKDEIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQ  233
             ++   DE+K FL  +  +  P  Y +F  L FTG R+GEL+AL W+D+D+  +TI+I++
Sbjct  171  TKYYSSDELKQFL--TFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINK  228

Query  234  TMFFENG-KEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAK----Y  288
            T       K VIQ  K   S R I+IDD+TA +LK WRT+Q+   L  G  +  K    +
Sbjct  229  TCARGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVF  288

Query  289  VLIRGDMRPLRLAYPNDLLNRMITKNKLHRITIHGFRHSHASILFEAGASIKEVQARLGH  348
              +R++ +PL     N  L+ +  KN + RI +HGFRH+H S+LFEAG SI+EVQ RLGH
Sbjct  289  TTVRDN-KPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGH  347

Query  349  KEIQTTMNIY  358
             +I+TTM+IY
Sbjct  348  GDIKTTMDIY  357

49) BLi01428 in NC_006322


> NC_017337_P2|2|G1|384546677|YP_005735930.1|Staphylococcus_aureus_subsp._aureus_ED133|-|109..1245|-|SAOV_0414c|integrase
Length=378

 Score =  172 bits (638),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 125/310 (41%), Positives = 187/310 (61%), Gaps = 12/310 (3%)

Query  55   IDNNALARNDIT-FEDVFKEWWDVHSKTIKRSTRYRKLSNFKKHILPHFGKLKIKDITRA  113
            + +N++  NDIT F +V+  W +   +T++ ST  R L+ F   IL HF  + IK IT +
Sbjct  54   VSQNGFLNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVP  113

Query  114  YCQKVINLIAQDIDSVQNVKIQANLVFKYALRMEYITKNPMEFVVIPKKEENFLSQEEEK  173
            YCQKVIN   +    ++ ++I ++ VFKYA+ +  I  NP      P+K E   +Q++  
Sbjct  114  YCQKVINKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKE---AQQDAS  170

Query  174  RNFWEKDEIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQ  233
             ++   DE+K FL  +  +  P  Y +F  L FTG R+GEL+AL W+D+D+  +TI+I++
Sbjct  171  TKYYSSDELKQFL--TFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINK  228

Query  234  TMFFENG-KEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAK----Y  288
            T       K VIQ  K   S R I+IDD+TA +LK WRT+Q+   L  G  +  K    +
Sbjct  229  TCARGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVF  288

Query  289  VLIRGDMRPLRLAYPNDLLNRMITKNKLHRITIHGFRHSHASILFEAGASIKEVQARLGH  348
              +R++ +PL     N  L+ +  KN + RI +HGFRH+H S+LFEAG SI+EVQ RLGH
Sbjct  289  TTVRDN-KPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGH  347

Query  349  KEIQTTMNIY  358
             +I+TTM+IY
Sbjct  348  GDIKTTMDIY  357