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Homologs of EF0480 gene of NC_004668_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EFS1_0359
( YP_007152151.1 )

excisionase

NC_019770
(Enterococcus faecalis Symbioflor 1)

4e-29

100

2) EF0480
( NP_814263.1 )

excisionase

NC_004668
(Enterococcus faecalis V583)

4e-29

100

3) ENT_25120
( YP_007808655.1 )

hypothetical protein

NC_021023
(Enterococcus sp. 7L76)

4e-29

100

4) RUM_21810
( YP_007830204.1 )

hypothetical protein

NC_021039
(Ruminococcus champanellensis 18P13)

7e-10

5) Sgly_0017
( YP_004264396.1 )

hypothetical protein

NC_015172
(Syntrophobotulus glycolicus DSM 8271)

2e-09

6) FPR_01550
( YP_007799004.1 )

DNA binding domain, excisionase family

NC_021020
(Faecalibacterium prausnitzii SL3/3)

4e-07

• Sequence Alignments

1) ENT_25120 in NC_021023


> NC_004668_P1|2|G2|29375110|NP_814263.1|Enterococcus_faecalis_V583|-|1214..1444|-|EF0480|excisionase
Length=76

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 76/76 (100%), Positives = 76/76 (100%), Gaps = 0/76 (0%)

Query  1   MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE  60
           MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE
Sbjct  1   MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE  60

Query  61  YILKIQDEGKNHAIIE  76
           YILKIQDEGKNHAIIE
Sbjct  61  YILKIQDEGKNHAIIE  76

2) EFS1_0359 in NC_019770


> NC_004668_P1|2|G2|29375110|NP_814263.1|Enterococcus_faecalis_V583|-|1214..1444|-|EF0480|excisionase
Length=76

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 76/76 (100%), Positives = 76/76 (100%), Gaps = 0/76 (0%)

Query  1   MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE  60
           MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE
Sbjct  1   MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE  60

Query  61  YILKIQDEGKNHAIIE  76
           YILKIQDEGKNHAIIE
Sbjct  61  YILKIQDEGKNHAIIE  76

3) EF0480 in NC_004668


> NC_004668_P1|2|G2|29375110|NP_814263.1|Enterococcus_faecalis_V583|-|1214..1444|-|EF0480|excisionase
Length=76

 Score =  121 bits (442),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 76/76 (100%), Positives = 76/76 (100%), Gaps = 0/76 (0%)

Query  1   MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE  60
           MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE
Sbjct  1   MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIE  60

Query  61  YILKIQDEGKNHAIIE  76
           YILKIQDEGKNHAIIE
Sbjct  61  YILKIQDEGKNHAIIE  76

4) RUM_21810 in NC_021039


> NC_004668_P1|2|G2|29375110|NP_814263.1|Enterococcus_faecalis_V583|-|1214..1444|-|EF0480|excisionase
Length=76

 Score = 57.4 bits (198),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 29/66 (44%), Positives = 46/66 (70%), Gaps = 3/66 (4%)

Query  12  YLMMFPEYPDIVNITQLQSMLGISRHLAYDLINDGYIRGLKIGNAFRIPKVNVIEYVM--  69
           Y  +F  YP I++IT+L  ML I+++ AY+L++D  I  +KIG  ++IPK  VIEY++  
Sbjct  6   YEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIEYILKI  65

Query  70  -DQGKS  74
            D+GK+
Sbjct  66  QDEGKN  71

5) Sgly_0017 in NC_015172


> NC_004668_P1|2|G2|29375110|NP_814263.1|Enterococcus_faecalis_V583|-|1214..1444|-|EF0480|excisionase
Length=76

 Score = 56.3 bits (194),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 26/56 (47%), Positives = 41/56 (74%), Gaps = 1/56 (1%)

Query  7   MFEKYPDVVEVNQLREMLGGISRKLAYKLLSEKEIHSVRIGRTYKIPKACVIEYLL  62
           +FE YP ++ + +L  ML  I+++ AY+LL +K I++++IG  YKIPK  VIEY+L
Sbjct  9   IFESYPSILKITDLTKMLN-IGKNKAYNLLKDKSIENIKIGARYKIPKKAVIEYIL  63

6) FPR_01550 in NC_021020


> NC_004668_P1|2|G2|29375110|NP_814263.1|Enterococcus_faecalis_V583|-|1214..1444|-|EF0480|excisionase
Length=76

 Score = 48.2 bits (163),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 23/56 (42%), Positives = 38/56 (68%), Gaps = 0/56 (0%)

Query  1   MFDYYDTLITPEEVADMLNCGMNTTYKLLKTGKIKAMRIGRVWKIPKRAVQEYIVQ  56
           +F+ Y +++   +++ MLN G N +Y+LLK   I  ++IG   KIPK+AV EYI++
Sbjct  9   IFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKAVIEYILK  64