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Homologs of SE1474 gene of NC_004461_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE1474
( NP_765029.1 )

hypothetical protein

NC_004461
(Staphylococcus epidermidis ATCC 12228)

5e-80

100

2) HMPREF0409_00396
( YP_008019680.1 )

hypothetical protein

NC_021281
(Fusobacterium sp. 4_8)

1e-25

3) FN1087
( NP_603984.1 )

hypothetical protein

NC_003454
(Fusobacterium nucleatum ATCC 25586)

1e-21

4) SFBM_0088
( YP_004770612.1 )

hypothetical protein

NC_015913
(Candidatus Arthromitus sp. mouse isolate)

6e-16

5) MOUSESFB_0087
( YP_005667805.1 )

hypothetical protein

NC_017294
(Candidatus Arthromitus sp. SFB-mouse-Yit)

6e-16

6) BP951000_1352
( YP_003785841.1 )

hypothetical protein

NC_014330
(Brachyspira pilosicoli 95/1000)

9e-16

• Sequence Alignments

1) SE1474 in NC_004461


> NC_004461_P2|2|G2|27468392|NP_765029.1|Staphylococcus_epidermidis_ATCC_12228|-|339..899|-|SE1474|hypothetical 
protein
Length=186

 Score =  290 bits (1085),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 186/186 (100%), Positives = 186/186 (100%), Gaps = 0/186 (0%)

Query  1    MKKNNKKKSTNCLIICHGKSEYLLANYLKSNLRIPAKIVSDKNGKKSIQINSLKNLFSGK  60
            MKKNNKKKSTNCLIICHGKSEYLLANYLKSNLRIPAKIVSDKNGKKSIQINSLKNLFSGK
Sbjct  1    MKKNNKKKSTNCLIICHGKSEYLLANYLKSNLRIPAKIVSDKNGKKSIQINSLKNLFSGK  60

Query  61   YFKSKNILENHYGLNINENFKIFIIMDTDDCNKEEALNYKNKSMFKNYWFYKFVIPIYNE  120
            YFKSKNILENHYGLNINENFKIFIIMDTDDCNKEEALNYKNKSMFKNYWFYKFVIPIYNE
Sbjct  61   YFKSKNILENHYGLNINENFKIFIIMDTDDCNKEEALNYKNKSMFKNYWFYKFVIPIYNE  120

Query  121  PNIENVIKSSNLSAMKNKTDVHRIFPIDDNINKIESIIFVSSKLKKCNSTNMDIMFEHLL  180
            PNIENVIKSSNLSAMKNKTDVHRIFPIDDNINKIESIIFVSSKLKKCNSTNMDIMFEHLL
Sbjct  121  PNIENVIKSSNLSAMKNKTDVHRIFPIDDNINKIESIIFVSSKLKKCNSTNMDIMFEHLL  180

Query  181  DMKKLI  186
            DMKKLI
Sbjct  181  DMKKLI  186

2) HMPREF0409_00396 in NC_021281


> NC_004461_P2|2|G2|27468392|NP_765029.1|Staphylococcus_epidermidis_ATCC_12228|-|339..899|-|SE1474|hypothetical 
protein
Length=186

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 70/173 (41%), Positives = 120/173 (70%), Gaps = 13/173 (7%)

Query  10   LVICHGKSEKLICDFIKSNLRIQIEIDSDKKGKKSIQITSVMKFLSGEKYKNIVSFKNKF  69
            L+ICHGKSE L+ +++KSNLRI   I SDK+GKKSIQI S+ +++SG  +K+   + N +
Sbjct  13   LIICHGKSEYLLANYLKSNLRIPAKIVSDKNGKKSIQINSLKNLFSGKYFKSKNILENHY  72

Query  70   DDIEPIKNRKKLPNYFKVFIIMDTDDCNENQKNSFKNKSMFKEHWLYDYIVPIYNDSNLE  129
            +         ++ + FK+FIIMDTDDCN ++  ++KNKSMFK+ W+Y +++PIYN++N+E
Sbjct  73   G--------LNINENFKIFIIMDTDDCNKEEALNYKNKSMFKNYWFYKFVIPIYNEPNIE  124

Query  130  EVLVDAGIKFQKNGNERKSEYPKVFPM-NGISDVEGIKKFGKCLKNSKKTNME  181
            +V+  + +    ++   K++  ++FP+ + I+ +E+I   +  LK+ + TNM+
Sbjct  125  NVIKSSNL----SAMKNKTDVHRIFPIDDNINKIESIIFVSSKLKKCNSTNMD  173

3) FN1087 in NC_003454


> NC_004461_P2|2|G2|27468392|NP_765029.1|Staphylococcus_epidermidis_ATCC_12228|-|339..899|-|SE1474|hypothetical 
protein
Length=186

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 71/173 (42%), Positives = 120/173 (70%), Gaps = 13/173 (7%)

Query  10   LVICHGKSEKLICDFIKSNLRIQIEIDSDKKGKKSIQITSIMKFLSGEKYKNIVSFKNKF  69
            L+ICHGKSE L+ +++KSNLRI   I SDK+GKKSIQI S+ +++SG  +K+   + N +
Sbjct  13   LIICHGKSEYLLANYLKSNLRIPAKIVSDKNGKKSIQINSLKNLFSGKYFKSKNILENHY  72

Query  70   DDIEPIKDRKKLPNYFKVFIIMDTDDCNENQkksfkdksmfkkHWLYDYIVPIYNDNNLE  129
            +         ++ + FK+FIIMDTDDCN ++  ++K+KSMFK+ W+Y +++PIYN+ N+E
Sbjct  73   G--------LNINENFKIFIIMDTDDCNKEEALNYKNKSMFKNYWFYKFVIPIYNEPNIE  124

Query  130  EILVDAGIKFQKNGNKRKTEYPKVFPM-NGISDIEGIKKFGKDLKNSKKTNME  181
            +++  + +    ++ K KT+  ++FP+ + I+ IE+I   +  LK+ + TNM+
Sbjct  125  NVIKSSNL----SAMKNKTDVHRIFPIDDNINKIESIIFVSSKLKKCNSTNMD  173

4) SFBM_0088 in NC_015913


> NC_004461_P2|2|G2|27468392|NP_765029.1|Staphylococcus_epidermidis_ATCC_12228|-|339..899|-|SE1474|hypothetical 
protein
Length=186

 Score = 77.6 bits (275),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 63/139 (46%), Positives = 90/139 (65%), Gaps = 8/139 (5%)

Query  13   CILICHGKSEKEFMETIKQNLRLKIHIESDKKGSKSIQINSLNKTLKNHKYGKRDNFLRY  72
            C++ICHGKSE  + + +K NLR+   I SDK+G KSIQINSL K L + KY K  N+L  
Sbjct  12   CLIICHGKSEYLLANYLKSNLRIPAKIVSDKNGKKSIQINSL-KNLFSGKYFKSKNILE-  69

Query  73   FEDIELIKGKITSEFKIFTLLDTDDKEKEINLIKYLNKEMFKEHHLYDHIVPIYNTPNLE  132
             ++  L   +I  +FKIF ++DTDD +KE  L +Y NK MFK+  +Y  ++PIYN PN+E
Sbjct  70   -NHYGL---NINENFKIFIIMDTDDCNKEEAL-NYKNKSMFKNYWFYKFVIPIYNEPNIE  124

Query  133  SVFEEIG-HVFKNKGEARK  150
            +V+        KNK + ++
Sbjct  125  NVIKSSNLSAMKNKTDVHR  143

5) MOUSESFB_0087 in NC_017294


> NC_004461_P2|2|G2|27468392|NP_765029.1|Staphylococcus_epidermidis_ATCC_12228|-|339..899|-|SE1474|hypothetical 
protein
Length=186

 Score = 77.6 bits (275),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 63/139 (46%), Positives = 90/139 (65%), Gaps = 8/139 (5%)

Query  13   CILICHGKSEKEFMETIKQNLRLKIHIESDKKGSKSIQINSLNKTLKNHKYGKRDNFLRY  72
            C++ICHGKSE  + + +K NLR+   I SDK+G KSIQINSL K L + KY K  N+L  
Sbjct  12   CLIICHGKSEYLLANYLKSNLRIPAKIVSDKNGKKSIQINSL-KNLFSGKYFKSKNILE-  69

Query  73   FEDIELIKGKITSEFKIFTLLDTDDKEKEINLIKYLNKEMFKEHHLYDHIVPIYNTPNLE  132
             ++  L   +I  +FKIF ++DTDD +KE  L +Y NK MFK+  +Y  ++PIYN PN+E
Sbjct  70   -NHYGL---NINENFKIFIIMDTDDCNKEEAL-NYKNKSMFKNYWFYKFVIPIYNEPNIE  124

Query  133  SVFEEIG-HVFKNKGEARK  150
            +V+        KNK + ++
Sbjct  125  NVIKSSNLSAMKNKTDVHR  143

6) BP951000_1352 in NC_014330


> NC_004461_P2|2|G2|27468392|NP_765029.1|Staphylococcus_epidermidis_ATCC_12228|-|339..899|-|SE1474|hypothetical 
protein
Length=186

 Score = 76.8 bits (272),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 104/160 (65%), Gaps = 15/160 (9%)

Query  12   LIIVHGKSELQMCNFIKKNLRLNNIDIISKNNGKHSIQITSLMKILNGKYLKTFNDFLIC  71
            LII HGKSE  + N++K NLR+    I+S +NGK SIQI SL ++++GKY+K+ N +   
Sbjct  13   LIICHGKSEYLLANYLKSNLRIPA-KIVSDKNGKKSIQINSLKNLFSGKYFKSKNILENH  71

Query  72   YEdklnldkngklnndFKIFIIMDTDDCkeeeknnfinknmfknYWAHKYIVPIYNIRNL  131
            Y  ++N +        FKIFIIMDTDDC+ EE  N+ NK+MFKNYW  K+++PIYN  N+
Sbjct  72   YGLNINEN--------FKIFIIMDTDDCNKEEALNYKNKSMFKNYWFYKFVIPIYNEPNI  123

Query  132  EDVLIKSKVIDKNTIKNKRDKKDYIKIFPTDDKYTKSDTI  171
            E+      VI  + +   ++K D  +IFP DD+  K ++I
Sbjct  124  EN------VIKSSNLSAMKNKTDVHRIFPIDDNINKIESI  157