>NC_003198_P10|2|G1|16763282|NP_458899.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|+|249..1514|STY4821|-|integrase
Length = 1266
Score = 1259 bits (3249), Expect = 0.0
Identities = 697/783 (89%)
Strand = Plus / Plus
Query: 221 gtgcagggcatcgacccaaaagcggaacagaaggaagctcaggctgagaattccggggca 280
||||||||||| || |||||| | |||||||| || |||||||| ||||| || |||||
Sbjct: 232 gtgcagggcattgatccaaaaaccgaacagaaagaggctcaggccgagaactcgggggcg 291
Query: 281 tatacttttgagaccatcgcctgcgaatggcatgcaaataacaagcgctggagcgaagac 340
|||||||| || || ||||| | ||||||||||| | ||||||||||||||||||||||
Sbjct: 292 tatactttcgaaactatcgctcgtgaatggcatgccagtaacaagcgctggagcgaagac 351
Query: 341 catcgatcgcgagttctccgttatcttgagctatatattttccctcacatcggttcgtct 400
||||||||||| ||||| || |||||||| || |||||||||||||| |||||||||||
Sbjct: 352 catcgatcgcgcgttcttcgctatcttgaactttatattttccctcatatcggttcgtcc 411
Query: 401 gatattcgtcagctcaaaaccagccatctgttagccccgatcaaaaaagttgatgcaagt 460
|| ||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 412 gacattcgccagctcaaaaccagtcacctgttagccccgatcaaaaaagttgatgccagt 471
Query: 461 ggcaagcatgacgtcgcgcagcgcctgcaacagcgcgtcacggccatcatgcgttacgcc 520
|| || || |||||||| |||||||||||||||||||||||||| || |||||||| |||
Sbjct: 472 ggtaaacacgacgtcgctcagcgcctgcaacagcgcgtcacggctattatgcgttatgcc 531
Query: 521 gtccagaatgattacatcgactctaatccagcaagtgatatggccggtgcgttatcgaca 580
|| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 532 gtacagaacgattacatcgactctaatccagccagtgacatggccggtgcgttatcgact 591
Query: 581 accaaagcgcgacattatcctgctttacactctagccggttccctgagtttcttgcacgt 640
|||||||| ||||| ||||| || |||| |||||||| ||||||||||||||||| ||
Sbjct: 592 accaaagcacgacactatccagccttaccttctagccgtttccctgagtttcttgctcgc 651
Query: 641 cttgcggcatatcgtggccgtgtgatgacacggatcgcggtcgaactttccttactgact 700
||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||||| |||
Sbjct: 652 cttgctgcatatcgtggccgtgtaatgacacggattgctgtcgagctttccttactaact 711
Query: 701 tttgttcgctccagtgagttacgttttgcgcgttgggatgagttcgacttcgataaatct 760
||||| || ||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 712 tttgtacgttccagcgagttacgtttcgcgcgttgggacgagttcgacttcgataaatcc 771
Query: 761 ctttggcgcgtaccggcaaaacgagaagaaattaagggcgtgcgttactcgtaccgtggc 820
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 772 ctttggcgcgtaccggcaaaacgagaagaaattaagggtgtgcgttattcgtaccgtggc 831
Query: 821 atgaagatgaaagaggagcatatcgttccgcttagtcggcaggcgatgatgttgctaagc 880
||||||||||||||||||||||||||||| || ||||||||||||||| | ||| ||
Sbjct: 832 atgaagatgaaagaggagcatatcgttcctctcagtcggcaggcgatggttttgttagag 891
Query: 881 cagttaaagcagattagtggtgataaagagctgctttttccgagtgatcatgacgcagct 940
||| | ||||||||||||||||||||||||||| | |||||| | ||||| |||||| ||
Sbjct: 892 cagctcaagcagattagtggtgataaagagctgttgtttccgggggatcacgacgcaact 951
Query: 941 aaggattatgagtgaaaacacagtaaacagcgcattgcgtgcgatgggttatgacactaa 1000
|||| ||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||
Sbjct: 952 aagg-ttatgagcgaaaacacggtaaatagcgcattgcgtgcgatgggttatgacacaaa 1010
Query: 1001 aac 1003
|||
Sbjct: 1011 aac 1013
Score = 218 bits (563), Expect = 6e-57
Identities = 129/151 (85%)
Strand = Plus / Plus
Query: 1026 gtggtgcattgggtgagtcaggattatggagtgatgacgctatagagcgtcaactgagtc 1085
||||||| ||||||||||||||||||||||| |||||||| ||||||||||| | || |
Sbjct: 1049 gtggtgctttgggtgagtcaggattatggagcgatgacgcgatagagcgtcagttaagcc 1108
Query: 1086 attctgagcgtaataatgtcagagctgcatatattcatacatctgagcatttggatgaaa 1145
||||||||||||| ||||| | ||||| |||||||| || || ||||||||||||||
Sbjct: 1109 attctgagcgtaacaatgtgcgtgctgcctatattcacacttcagagcatttggatgagc 1168
Query: 1146 ggcgcttaatggttcaatggtgggctgatta 1176
| || || ||||| || ||||||||||||||
Sbjct: 1169 gtcgtttgatggtgcagtggtgggctgatta 1199
Score = 147 bits (379), Expect = 2e-35
Identities = 89/110 (81%)
Strand = Plus / Plus
Query: 99 gggatcgaaatactggcgaatgaagtaccgccgcccaatcgataagaaagaagacaggtt 158
|||||| ||||||||||| ||||| ||| | ||||| || || ||||| || | |
Sbjct: 99 gggatccaaatactggcgcatgaaatacagacgcccctctgacaaaaaagaggatcgcct 158
Query: 159 cgcttttggcgtttggcctaccgtgacgcctgctcaggcaaaagcaaagc 208
||||||||| ||||||||||| ||||| | ||||||||||| ||||||||
Sbjct: 159 cgcttttggtgtttggcctactgtgacacttgctcaggcaagagcaaagc 208
Score = 89 bits (229), Expect = 5e-18
Identities = 61/76 (80%)
Strand = Plus / Plus
Query: 1 atgaagctcaacgcccgccaagtcgagactgccaagccaaaagataaaacctataa---- 56
||||||||||||||| | || |||||||| || ||||||||||| |||||||| ||
Sbjct: 1 atgaagctcaacgccagacaggtcgagaccgcaaagccaaaagacaaaacctacaaaatg 60
Query: 57 ---gatggcggacggt 69
|||||||| ||||
Sbjct: 61 gccgatggcgg-cggt 75
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