Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type I restriction enzyme protein |
NC_002953 (Staphylococcus aureus MSSA476) |
0.0 |
100 |
|
type I restriction-modification system restriction subunit |
NC_018704 (Amphibacillus xylanus NBRC 15112) |
0.0 |
76 |
|
type III restriction protein res subunit |
NC_012794 (Geobacillus sp. WCH70) |
0.0 |
60 |
|
type I restriction enzyme protein |
NC_012470 (Streptococcus equi H70) |
0.0 |
57 |
|
type III restriction enzyme, res subunit |
NC_009135 (Methanococcus maripaludis C5) |
0.0 |
56 |
|
type III restriction protein res subunit |
NC_009634 (Methanococcus vannielii SB) |
0.0 |
55 |
|
Type III restriction protein res subunit |
NC_014614 (Clostridium sticklandii DSM 519) |
0.0 |
55 |
|
putative restriction enzyme |
NC_017070 (Selenomonas ruminantium TAM6421) |
0.0 |
52 |
|
hypothetical protein |
NC_014624 (Eubacterium limosum KIST612) |
0.0 |
49 |
|
type III restriction protein res subunit |
NC_012563 (Clostridium botulinum Kyoto) |
0.0 |
52 |
|
type I restriction enzyme, R subunit |
NC_010163 (Acholeplasma laidlawii PG-8A) |
0.0 |
48 |
|
putative type I restriction-modification system (HsdR) |
NC_022075 (Bacillus amyloliquefaciens UCMB-5033) |
0.0 |
44 |
|
type I restriction-modification system restriction subunity (HsdR) |
NC_014479 (Bacillus subtilis W23) |
0.0 |
44 |
|
dead/deah box helicase |
NC_017195 (Bacillus subtilis RO-NN-1) |
0.0 |
44 |
|
Type I restriction-modification system R subunit HsdR |
NC_019896 (Bacillus subtilis BSP1) |
0.0 |
44 |
|
hypothetical protein |
NC_010718 (Natranaerobius thermophilus JW/NM-WN-LF) |
0.0 |
44 |
|
Type 1 restriction-modification system R (restriction) subunit |
NC_013791 (Bacillus pseudofirmus OF4) |
0.0 |
44 |
|
Type 1 restriction-modification system R (restriction) subunit |
NC_018500 (Bacillus thuringiensis HD-771) |
0.0 |
44 |
|
type III restriction protein res subunit |
NC_015172 (Syntrophobotulus glycolicus DSM 8271) |
0.0 |
44 |
|
Restriction endonuclease, type I, EcoRI, R subunit/Type III |
NC_015519 (Tepidanaerobacter acetatoxydans Re1) |
0.0 |
45 |
|
putative type I restriction-modification system (HsdR) |
NC_019954 (Tepidanaerobacter acetatoxydans Re1) |
0.0 |
45 |
|
Restriction endonuclease, type I, EcoRI, R subunit/Type III |
NC_018020 (Turneriella parva DSM 21527) |
0.0 |
43 |
|
helicase, type I site-specific restriction-modification system restriction subunit |
NC_016627 (Clostridium clariflavum DSM 19732) |
0.0 |
45 |
|
hypothetical protein |
NC_014935 (Nitratifractor salsuginis DSM 16511) |
3e-180 |
41 |
|
hypothetical protein |
NC_014828 (Ethanoligenens harbinense YUAN-3) |
2e-178 |
46 |
|
type III restriction protein res subunit |
NC_013161 (Cyanothece sp. PCC 8802) |
3e-178 |
41 |
|
DEAD/DEAH box helicase |
NC_020449 (Candidatus Cloacamonas acidaminovorans Evry) |
9e-178 |
42 |
|
type I restriction-modification system R subunit |
NC_016640 (Arthrospira platensis NIES-39) |
6e-177 |
42 |
|
DEAD/DEAH box helicase |
NC_007404 (Thiobacillus denitrificans ATCC 25259) |
7e-176 |
42 |
|
hypothetical protein |
NC_012912 (Dickeya zeae Ech1591) |
4e-175 |
42 |
|
Restriction endonuclease, type I, EcoRI, R subunit/Type III |
NC_015572 (Methylomonas methanica MC09) |
5e-175 |
41 |
|
helicase, type I site-specific restriction-modification system restriction subunit |
NC_019738 (Microcoleus sp. PCC 7113) |
5e-175 |
41 |
|
hypothetical protein |
NC_022444 (Desulfovibrio gigas ATCC 19364) |
8e-175 |
41 |
|
helicase, type I site-specific restriction-modification system restriction subunit |
NC_019693 (Oscillatoria acuminata PCC 6304) |
7e-173 |
41 |
|
type III restriction protein res subunit |
NC_017455 (Halanaerobium praevalens DSM 2228) |
3e-170 |
42 |
|
type III restriction protein res subunit |
NC_015510 (Haliscomenobacter hydrossis DSM 1100) |
3e-170 |
41 |
|
hypothetical protein |
NC_019396 (Gluconobacter oxydans H24) |
2e-169 |
42 |
|
hypothetical protein |
NC_009441 (Flavobacterium johnsoniae UW101) |
3e-168 |
42 |
|
hypothetical protein |
NC_014253 (Methanohalobium evestigatum Z-7303) |
1e-166 |
41 |
|
hypothetical protein |
NC_009943 (Desulfococcus oleovorans Hxd3) |
1e-165 |
41 |
|
type I restriction enzyme R protein |
NC_014125 (Legionella pneumophila 2300/99 Alcoy) |
7e-164 |
42 |
|
HsdR protein |
NC_006300 (Mannheimia succiniciproducens MBEL55E) |
2e-163 |
41 |
|
putative type I restriction enzyme R protein |
NC_009494 (Legionella pneumophila Corby) |
1e-162 |
42 |
|
type III restriction protein res subunit |
NC_014222 (Methanococcus voltae A3) |
5e-160 |
41 |
|
type III restriction protein, res subunit |
NC_009617 (Clostridium beijerinckii NCIMB 8052) |
6e-158 |
44 |
|
Type I restriction enzyme R |
NC_016943 (Blastococcus saxobsidens DD2) |
7e-158 |
45 |
|
type I site-specific restriction-modification system, R subunit |
NC_011901 (Thioalkalivibrio sulfidophilus HL-EbGR7) |
4e-148 |
41 |
|
DEAD/DEAH box helicase |
NC_021834 (Campylobacter jejuni 32488) |
4e-146 |
41 |
|
type I restriction-modification system restriction subunit |
NC_007355 (Methanosarcina barkeri Fusaro) |
1e-145 |
41 |
|
type I site-specific deoxyribonuclease chain R |
NC_008787 (Campylobacter jejuni 81-176) |
5e-145 |
41 |
|
Type I restriction-modification system, restriction subunit R |
NC_019902 (Thioalkalivibrio nitratireducens DSM 14787) |
1e-144 |
41 |
|
Type I restriction-modification system, restriction subunit R |
NC_022132 (Campylobacter coli 76339) |
9e-144 |
43 |
|
type I restriction-modification system subunit R |
NC_009656 (Pseudomonas aeruginosa PA7) |
9e-144 |
42 |
|
type I restriction-modification system subunit R |
NC_017532 (Pseudomonas stutzeri DSM 4166) |
7e-143 |
42 |
|
Type I site-specific restriction-modification system, R subunit (helicase) |
NC_021286 (Idiomarina loihiensis GSL 199) |
4e-142 |
42 |
|
Type I site-specific restriction-modification system, R subunit (helicase) |
NC_006512 (Idiomarina loihiensis L2TR) |
4e-142 |
42 |
|
Type I restriction-modification system, restriction subunit R |
NC_016830 (Pseudomonas fluorescens F113) |
7e-141 |
42 |
|
Type I restriction enzyme R protein N terminal protein (HSDR_N) |
NC_014802 (Campylobacter jejuni ICDCCJ07001) |
1e-140 |
42 |
|
type I restriction enzyme R protein |
NC_019936 (Pseudomonas stutzeri RCH2) |
2e-140 |
41 |
|
Restriction endonuclease, type I, EcoRI, R subunit/Type III |
NC_015563 (Delftia sp. Cs1-4) |
4e-133 |
41 |
|
Type I restriction-modification system, restriction subunit R |
NC_021213 (Streptococcus suis TL13) |
2e-127 |
42 |
|
Type I site-specific restriction-modification system, R (restriction) subunit-related helicase |
NC_021917 (Cycloclasticus zancles 7-ME) |
7e-125 |
41 |
|
type III restriction protein res subunit |
NC_012691 (Tolumonas auensis DSM 9187) |
5e-123 |
43 |
|
type I/III endonuclease restriction R subunit |
NC_013211 (Acetobacter pasteurianus IFO 3283) |
3e-113 |
41 |
|
type I/III endonuclease restriction R subunit |
NC_017105 (Acetobacter pasteurianus IFO 3283) |
3e-113 |
41 |
|
type I/III endonuclease restriction R subunit |
NC_017113 (Acetobacter pasteurianus IFO 3283) |
3e-113 |
41 |
|
type I/III endonuclease restriction R subunit |
NC_017118 (Acetobacter pasteurianus IFO 3283) |
3e-113 |
41 |
|
type I/III endonuclease restriction R subunit |
NC_017122 (Acetobacter pasteurianus IFO 3283) |
3e-113 |
41 |
|
type I/III endonuclease restriction R subunit |
NC_017126 (Acetobacter pasteurianus IFO 3283) |
3e-113 |
41 |
|
type I/III endonuclease restriction R subunit |
NC_017131 (Acetobacter pasteurianus IFO 3283) |
3e-113 |
41 |
|
type I/III endonuclease restriction R subunit |
NC_017149 (Acetobacter pasteurianus IFO 3283) |
3e-113 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_002953_R1' AND ph.id_pai_orf='2' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc