Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
sensory transducer |
NC_013941 (Escherichia coli CB9615) |
4e-125 |
100 |
|
transcriptional regulator |
NC_011353 (Escherichia coli EC4115) |
4e-125 |
100 |
|
sensory transducer |
NC_017656 (Escherichia coli RM12579) |
4e-125 |
100 |
|
sensory transducer |
NC_002695 (Escherichia coli Sakai) |
4e-125 |
100 |
|
transcriptional regulator |
NC_013008 (Escherichia coli TW14359) |
4e-125 |
100 |
|
putative sensory transducer |
NC_017906 (Escherichia coli Xuzhou21) |
4e-125 |
100 |
|
sensory transducer |
NC_002655 (Escherichia coli EDL933) |
2e-124 |
99 |
|
putative transcriptional regulator |
NC_013364 (Escherichia coli 11128) |
1e-122 |
99 |
|
transcriptional regulator |
NC_013361 (Escherichia coli 11368) |
1e-122 |
99 |
|
transcriptional regulator |
NC_018650 (Escherichia coli 2009EL-2050) |
1e-122 |
99 |
|
transcriptional regulator |
NC_018661 (Escherichia coli 2009EL-2071) |
1e-122 |
99 |
|
transcriptional regulator |
NC_018658 (Escherichia coli 2011C-3493) |
1e-122 |
99 |
|
transcriptional regulator |
NC_011748 (Escherichia coli 55989) |
1e-122 |
99 |
|
transcriptional regulator |
NC_020163 (Escherichia coli APEC O78) |
1e-122 |
99 |
|
transcriptional regulator CadC |
NC_017625 (Escherichia coli DH1) |
1e-122 |
99 |
|
putative transcriptional regulator |
NC_017638 (Escherichia coli DH1) |
1e-122 |
99 |
|
transcriptional regulatory protein, C terminal |
NC_009801 (Escherichia coli E24377A) |
1e-122 |
99 |
|
putative transcriptional regulator |
NC_017633 (Escherichia coli ETEC H10407) |
1e-122 |
99 |
|
putative transcriptional regulator |
NC_011741 (Escherichia coli IAI1) |
1e-122 |
99 |
|
transcriptional regulator |
NC_010473 (Escherichia coli K-12) |
1e-122 |
99 |
|
putative transcriptional regulator |
NC_012759 (Escherichia coli K-12) |
1e-122 |
99 |
|
predicted transcriptional regulator |
NC_020518 (Escherichia coli K-12) |
1e-122 |
99 |
|
transcriptional regulator |
NC_007779 (Escherichia coli K-12) |
1e-122 |
99 |
|
predicted transcriptional regulator |
NC_000913 (Escherichia coli K12) |
1e-122 |
99 |
|
transcriptional regulator CadC |
NC_016902 (Escherichia coli KO11FL) |
1e-122 |
99 |
|
putative transcriptional regulator |
NC_017660 (Escherichia coli KO11FL) |
1e-122 |
99 |
|
hypothetical protein |
NC_022364 (Escherichia coli LY180) |
1e-122 |
99 |
|
hypothetical protein |
NC_017663 (Escherichia coli P12b) |
1e-122 |
99 |
|
transcriptional regulatory protein, C terminal protein |
NC_017641 (Escherichia coli UMNK88) |
1e-122 |
99 |
|
putative transcriptional regulator |
NC_017635 (Escherichia coli W) |
1e-122 |
99 |
|
putative transcriptional regulator |
NC_017664 (Escherichia coli W) |
1e-122 |
99 |
|
putative transcriptional regulator |
NC_011415 (Escherichia coli SE11) |
2e-122 |
99 |
|
transcriptional regulator |
NC_013353 (Escherichia coli 12009) |
3e-122 |
99 |
|
transcriptional regulator CadC |
NC_010468 (Escherichia coli ATCC 8739) |
3e-122 |
99 |
|
transcriptional regulatory protein, C terminal |
NC_009800 (Escherichia coli HS) |
3e-122 |
99 |
|
putative transcriptional regulator |
NC_017626 (Escherichia coli 042) |
3e-121 |
97 |
|
putative transcriptional regulator |
NC_017646 (Escherichia coli CE10) |
3e-121 |
97 |
|
putative transcriptional regulator |
NC_011750 (Escherichia coli IAI39) |
3e-121 |
97 |
|
putative transcriptional regulator |
NC_011751 (Escherichia coli UMN026) |
3e-121 |
97 |
|
regulatory protein |
NC_011740 (Escherichia fergusonii ATCC 35469) |
7e-65 |
49 |
|
transcriptional regulator |
NC_013716 (Citrobacter rodentium ICC168) |
1e-61 |
47 |
|
putative sensory transducer |
NC_009648 (Klebsiella pneumoniae subsp. pneumoniae MGH 78578) |
1e-59 |
43 |
|
hypothetical protein |
NC_021500 (Enterobacter sp. R4-368) |
8e-58 |
44 |
|
hypothetical protein |
NC_014121 (Enterobacter cloacae ATCC 13047) |
2e-57 |
43 |
|
transcriptional regulatory protein, C |
NC_022241 (Salmonella enterica 3114) |
4e-54 |
42 |
|
transcriptional regulator C |
NC_011080 (Salmonella enterica SL254) |
4e-54 |
42 |
|
transcriptional regulator |
NC_012125 (Salmonella enterica RKS4594) |
5e-54 |
42 |
|
Transcriptional regulatory protein, C |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
5e-54 |
42 |
|
transcriptional regulator |
NC_021844 (Salmonella enterica CFSAN000189) |
1e-53 |
42 |
|
transcriptional regulatory protein |
NC_006905 (Salmonella enterica SC-B67) |
1e-53 |
42 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
1e-53 |
42 |
|
transcriptional regulatory protein, C |
NC_011149 (Salmonella enterica SL483) |
1e-53 |
42 |
|
Putative sensory transducer |
NC_021870 (Salmonella bongori N268-08) |
7e-54 |
42 |
|
putative transcriptional regulator |
NC_021810 (Salmonella enterica 41578) |
7e-54 |
42 |
|
Sensory transducer |
NC_017623 (Salmonella enterica B182) |
7e-54 |
42 |
|
transcriptional regulator |
NC_003197 (Salmonella enterica LT2) |
7e-54 |
42 |
|
transcriptional regulator C |
NC_011083 (Salmonella enterica SL476) |
7e-54 |
42 |
|
transcriptional regulator C |
NC_016860 (Salmonella enterica T000240) |
7e-54 |
42 |
|
putative transcriptional regulator |
NC_021151 (Salmonella enterica U288) |
7e-54 |
42 |
|
hypothetical protein |
NC_015761 (Salmonella bongori NCTC 12419) |
8e-54 |
42 |
|
transcriptional regulator |
NC_021820 (Salmonella enterica 08-1736) |
8e-54 |
42 |
|
putative transcriptional regulator |
NC_016856 (Salmonella enterica 14028S) |
8e-54 |
42 |
|
transcriptional regulator (MarT) |
NC_017046 (Salmonella enterica 798) |
8e-54 |
42 |
|
putative transcriptional regulator |
NC_022221 (Salmonella enterica CDC1983-67) |
8e-54 |
42 |
|
putative transcriptional regulator (MarT) |
NC_016831 (Salmonella enterica RKS5078) |
8e-54 |
42 |
|
putative transcriptional regulator (MarT) |
NC_016810 (Salmonella enterica SL1344) |
8e-54 |
42 |
|
transcriptional regulator |
NC_011147 (Salmonella enterica AKU12601) |
9e-54 |
42 |
|
transcriptional regulator |
NC_020307 (Salmonella enterica CFSAN001992) |
9e-54 |
42 |
|
transcriptional regulator |
NC_021984 (Salmonella enterica S06004) |
9e-54 |
42 |
|
transcriptional regulator |
NC_021818 (Salmonella enterica CFSAN002050) |
1e-53 |
42 |
|
transcriptional regulatory protein C |
NC_011094 (Salmonella enterica CVM19633) |
1e-53 |
42 |
|
transcriptional regulator |
NC_006511 (Salmonella enterica ATCC 9150) |
2e-53 |
42 |
|
transcriptional regulator |
NC_021814 (Salmonella enterica CFSAN001921) |
2e-53 |
42 |
|
transcriptional regulator |
NC_021812 (Salmonella enterica CFSAN002069) |
2e-53 |
42 |
|
putative transcriptional regulator (MarT) |
NC_016854 (Salmonella enterica D23580) |
2e-53 |
42 |
|
transcriptional regulator |
NC_011294 (Salmonella enterica P125109) |
2e-53 |
42 |
|
putative transcriptional regulator MarT |
NC_016857 (Salmonella enterica ST4/74) |
2e-53 |
42 |
|
putative transcriptional regulator |
NC_016863 (Salmonella enterica UK-1) |
2e-53 |
42 |
|
transcriptional regulator MarT |
NC_011274 (Salmonella enterica 287/91) |
6e-52 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_002695_P1' AND ph.id_pai_orf='2' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc