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Homologs of VC1758 gene of NC_002505_P5

166

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Sbal175_2428
( YP_006020985.1 )

integrase family protein

NC_017571
(Shewanella baltica BA175)

3e-136

2) Shewmr7_1761
( YP_737811.1 )

phage integrase family protein

NC_008322
(Shewanella sp. MR-7)

2e-130

3) Shewmr4_1686
( YP_733819.1 )

phage integrase family protein

NC_008321
(Shewanella sp. MR-4)

2e-129

4) Shewana3_1791
( YP_869430.1 )

phage integrase family protein

NC_008577
(Shewanella sp. ANA-3)

4e-129

5) intA
( NP_717087.1 )

CP4-57-like prophage integrase IntA

NC_004347
(Shewanella oneidensis MR-1)

2e-107

6) Shewmr7_2855
( YP_738896.1 )

phage integrase family protein

NC_008322
(Shewanella sp. MR-7)

1e-105

7) B479_23050
( YP_007231442.1 )

integrase family protein

NC_019905
(Pseudomonas putida PC9)

3e-104

8) Shewmr4_2777
( YP_734905.1 )

phage integrase family protein

NC_008321
(Shewanella sp. MR-4)

3e-103

9) PputGB1_4740
( YP_001670962.1 )

integrase family protein

NC_010322
(Pseudomonas putida GB-1)

8e-103

10) Ping_1601
( YP_942997.1 )

phage integrase family protein

NC_008709
(Psychromonas ingrahamii 37)

3e-102

11) PSEBR_a748
( YP_004351914.1 )

integrase

NC_015379
(Pseudomonas brassicacearum NFM421)

5e-101

12) H045_16950
( YP_007398949.1 )

integrase family protein

NC_020209
(Pseudomonas poae RE*1-1-14)

1e-100

13) Pmen_1188
( YP_001186685.1 )

phage integrase family protein

NC_009439
(Pseudomonas mendocina ymp)

6e-100

14) AMBAS45_06325
( YP_006802224.1 )

phage integrase

NC_018679
(Alteromonas macleodii Balearic Sea AD45)

2e-99

15) Shew_1267
( YP_001093396.1 )

phage integrase family protein

NC_009092
(Shewanella loihica PV-4)

9e-99

16) PSF113_0837
( YP_005206264.1 )

Phage integrase

NC_016830
(Pseudomonas fluorescens F113)

1e-98

17) CPS_2917
( YP_269617.1 )

phage integrase family site specific recombinase

NC_003910
(Colwellia psychrerythraea 34H)

6e-98

18) intA
( YP_006531316.1 )

phage integrase family protein

NC_018220
(Pseudomonas putida DOT-T1E)

2e-97

19) Pput_4605
( YP_001269909.1 )

phage integrase family protein

NC_009512
(Pseudomonas putida F1)

5e-97

20) YSA_03532
( YP_006385793.1 )

phage integrase family protein

NC_017986
(Pseudomonas putida ND6)

5e-97

21) Shewana3_2953
( YP_870585.1 )

phage integrase family protein

NC_008577
(Shewanella sp. ANA-3)

9e-97

22) PputUW4_00675
( YP_007027687.1 )

phage integrase

NC_019670
(Pseudomonas sp. UW4)

1e-96

23) Sde_2743
( YP_528215.1 )

phage integrase

NC_007912
(Saccharophagus degradans 2-40)

3e-96

24) intA
( YP_003882692.1 )

phage integrase

NC_014500
(Dickeya dadantii 3937)

4e-96

25) GNIT_1611
( YP_004871721.1 )

site-specific recombinase, phage integrase family protein

NC_016041
(Glaciecola nitratireducens FR1064)

1e-95

26) Dd586_2389
( YP_003333945.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

4e-95

27) PCC21_016360
( YP_006646292.1 )

integrase family protein

NC_018525
(Pectobacterium carotovorum PCC21)

4e-95

28) Pecwa_1902
( YP_003259289.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

5e-95

29) intA
( YP_050841.1 )

prophage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-94

30) Ping_2463
( YP_943793.1 )

phage integrase family protein

NC_008709
(Psychromonas ingrahamii 37)

1e-93

31) Dd703_2362
( YP_002987967.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

1e-93

32) Tola_2265
( YP_002893449.1 )

integrase family protein

NC_012691
(Tolumonas auensis DSM 9187)

3e-93

33) PC1_1631
( YP_003017208.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

7e-93

34) W5S_1848
( YP_006282811.1 )

Prophage CP4-57 integrase

NC_017845
(Pectobacterium sp. SCC3193)

1e-92

35) int5
( YP_005194924.1 )

site-specific recombinase, phage integrase family

NC_016816
(Pantoea ananatis LMG 5342)

4e-92

36) SPAB_03412
( YP_001589593.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

6e-92

37) KPR_1464
( YP_007990445.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

6e-92

38) Pfl01_0747
( YP_346479.1 )

Phage integrase

NC_007492
(Pseudomonas fluorescens Pf0-1)

3e-91

39) K734_08335
( YP_008035162.1 )

integrase

NC_021286
(Idiomarina loihiensis GSL 199)

4e-91

40) intA
( YP_156036.1 )

integrase

NC_006512
(Idiomarina loihiensis L2TR)

4e-91

41) PflA506_4578
( YP_006325980.1 )

site-specific recombinase, phage integrase family

NC_017911
(Pseudomonas fluorescens A506)

7e-91

42) RORB6_24510
( YP_007877134.1 )

hypothetical protein

NC_021066
(Raoultella ornithinolytica B6)

2e-90

43) ECO26_3102
( YP_003230054.1 )

integrase

NC_013361
(Escherichia coli 11368)

2e-90

44) intA
( YP_002398550.1 )

integrase from prophage

NC_011745
(Escherichia coli ED1a)

3e-90

45) SBO_2134
( YP_408540.1 )

CP4-57-type integrase

NC_007613
(Shigella boydii Sb227)

6e-90

46) ECO111_2908
( YP_003235292.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

3e-89

47) EC042_2422
( YP_006096729.1 )

integrase

NC_017626
(Escherichia coli 042)

4e-89

48) Ping_0234
( YP_941700.1 )

phage integrase family protein

NC_008709
(Psychromonas ingrahamii 37)

1e-88

49) Ent638_3101
( YP_001177816.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

2e-88

50) H650_08995
( YP_008107625.1 )

integrase

NC_021500
(Enterobacter sp. R4-368)

4e-88

51) SbBS512_E0767
( YP_001879477.1 )

prophage integrase

NC_010658
(Shigella boydii CDC 3083-94)

5e-88

52) ECA0835
( YP_048945.1 )

prophage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

8e-88

53) Spea_1281
( YP_001501143.1 )

integrase family protein

NC_009901
(Shewanella pealeana ATCC 700345)

2e-87

54) EBL_c09420
( YP_006318568.1 )

putative phage integrase

NC_017910
(Escherichia blattae DSM 4481)

2e-87

55) CFSAN001992_19740
( YP_007473660.1 )

phage integrase family protein

NC_020307
(Salmonella enterica CFSAN001992)

2e-87

56) SNSL254_A2952
( YP_002041998.1 )

phage integrase family protein

NC_011080
(Salmonella enterica SL254)

2e-87

57) SN31241_38450
( YP_008361760.1 )

Prophage CP4-57 integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-87

58) ESA_00630
( YP_001436750.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

3e-87

59) O3M_06375
( YP_006768937.1 )

integrase

NC_018650
(Escherichia coli 2009EL-2050)

4e-87

60) O3O_19320
( YP_006783044.1 )

integrase

NC_018661
(Escherichia coli 2009EL-2071)

4e-87

61) O3K_06330
( YP_006777974.1 )

integrase

NC_018658
(Escherichia coli 2011C-3493)

4e-87

62) intA
( YP_002403911.1 )

integrase

NC_011748
(Escherichia coli 55989)

4e-87

63) int
( YP_002381651.1 )

phage integrase

NC_011740
(Escherichia fergusonii ATCC 35469)

1e-86

64) PC1_0723
( YP_003016313.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

1e-86

65) UMN798_2960
( YP_005398107.1 )

bacteriophage integrase

NC_017046
(Salmonella enterica 798)

2e-86

66) SL1344_2712
( YP_005182607.1 )

bacteriophage integrase

NC_016810
(Salmonella enterica SL1344)

2e-86

67) STM474_2864
( YP_005243712.1 )

site-specific recombinase, phage integrase family

NC_016857
(Salmonella enterica ST4/74)

2e-86

68) ETAE_2742
( YP_003296788.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

2e-86

69) I607_10285
( YP_008172110.1 )

phage integrase family site specific recombinase

NC_021710
(Alteromonas macleodii Ionian Sea U4)

3e-86

70) I876_10625
( YP_008196519.1 )

phage integrase family site specific recombinase

NC_021717
(Alteromonas macleodii Ionian Sea U7)

3e-86

71) I634_10495
( YP_008176212.1 )

phage integrase family site specific recombinase

NC_021712
(Alteromonas macleodii Ionian Sea U8)

3e-86

72) W5S_0850
( YP_006281840.1 )

Prophage CP4-57 integrase

NC_017845
(Pectobacterium sp. SCC3193)

3e-86

73) Pecwa_0958
( YP_003258382.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

6e-86

74) M621_19565
( YP_008160683.1 )

integrase

NC_021659
(Serratia plymuthica S13)

6e-86

75) Ping_2496
( YP_943821.1 )

phage integrase family protein

NC_008709
(Psychromonas ingrahamii 37)

7e-86

76) Entcl_1101
( YP_003940652.1 )

integrase family protein

NC_014618
(Enterobacter cloacae SCF1)

1e-85

77) SPAB_03429
( YP_001589610.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-85

78) A1122_19345
( YP_005523503.1 )

putative prophage integrase

NC_017168
(Yersinia pestis A1122)

4e-85

79) YpAngola_A1370
( YP_001605897.1 )

prophage CP4-57 integrase

NC_010159
(Yersinia pestis Angola)

4e-85

80) YPA_0577
( YP_650490.1 )

putative prophage integrase

NC_008150
(Yersinia pestis Antiqua)

4e-85

81) YPO1098
( YP_002346142.1 )

prophage integrase

NC_003143
(Yersinia pestis CO92)

4e-85

82) YPD4_0956
( YP_005504168.1 )

putative prophage integrase

NC_017154
(Yersinia pestis D106004)

4e-85

83) YPD8_1174
( YP_005508252.1 )

putative prophage integrase

NC_017160
(Yersinia pestis D182038)

4e-85

84) YPC_1149
( YP_005623096.1 )

putative prophage integrase

NC_017265
(Yersinia pestis Harbin 35)

4e-85

85) YPN_2899
( YP_648826.1 )

prophage integrase

NC_008149
(Yersinia pestis Nepal516)

4e-85

86) YPDSF_2598
( YP_001163939.1 )

prophage integrase

NC_009381
(Yersinia pestis Pestoides F)

4e-85

87) YPZ3_0998
( YP_003567170.1 )

putative prophage integrase

NC_014029
(Yersinia pestis Z176003)

4e-85

88) int3
( YP_005194560.1 )

prophage CP4-57 integrase

NC_016816
(Pantoea ananatis LMG 5342)

5e-85

89) intA1
( NP_992430.1 )

prophage CP4-57 integrase

NC_005810
(Yersinia pestis 91001)

6e-85

90) intA
( NP_670380.1 )

prophage CP4-57 integrase

NC_004088
(Yersinia pestis KIM)

6e-85

91) CFSAN001921_03570
( YP_008254117.1 )

integrase

NC_021814
(Salmonella enterica CFSAN001921)

6e-85

92) ST548_p3272
( YP_007391326.1 )

Prophage CP4-57 integrase

NC_020181
(Enterobacter aerogenes EA1509E)

2e-84

93) YPTS_1211
( YP_001871643.1 )

integrase

NC_010634
(Yersinia pseudotuberculosis PB1/+)

3e-84

94) CSSP291_03150
( YP_007439517.1 )

integrase

NC_020260
(Cronobacter sakazakii Sp291)

3e-84

95) ETAF_2475
( YP_005700070.1 )

Prophage CP4-57 integrase

NC_017309
(Edwardsiella tarda FL6-60)

3e-84

96) EcDH1_1053
( YP_006091017.1 )

integrase family protein

NC_017625
(Escherichia coli DH1)

8e-84

97) intA
( YP_006129942.1 )

integrase

NC_017638
(Escherichia coli DH1)

8e-84

98) intA
( YP_002927576.1 )

integrase

NC_012759
(Escherichia coli K-12)

8e-84

99) intA
( YP_490843.1 )

integrase

NC_007779
(Escherichia coli K-12)

8e-84

100) intA
( NP_417111.1 )

CP4-57 prophage; integrase

NC_000913
(Escherichia coli K12)

8e-84

101) A225_4472
( YP_006500153.1 )

phage integrase

NC_018106
(Klebsiella oxytoca E718)

4e-83

102) intA
( YP_003521207.1 )

IntA

NC_013956
(Pantoea ananatis LMG 20103)

5e-83

103) EcolC_1063
( YP_001724057.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

7e-83

104) Dda3937_01705
( YP_003881566.1 )

phage integrase

NC_014500
(Dickeya dadantii 3937)

1e-82

105) PAGR_g1112
( YP_005991859.1 )

integrase family protein

NC_017554
(Pantoea ananatis PA13)

2e-82

106) t2647
( NP_806358.2 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

2e-82

107) TY21A_13395
( YP_007926930.1 )

integrase family protein

NC_021176
(Salmonella enterica Ty21a)

2e-82

108) D781_3430
( YP_007345833.1 )

Integrase

NC_020064
(Serratia marcescens FGI94)

4e-82

109) S70_03250
( YP_006215230.1 )

phage integrase

NC_017731
(Providencia stuartii MRSN 2154)

5e-81

110) intB
( YP_008398551.1 )

prophage integrase

NC_022000
(Proteus mirabilis BB2000)

6e-81

111) A3UG_17330
( YP_006478890.1 )

integrase

NC_018079
(Enterobacter cloacae SDM)

8e-81

112) EJP617_01070
( YP_005816675.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

2e-80

113) intA
( YP_005728307.1 )

putative CP4-57-type integrase

NC_017328
(Shigella flexneri 2002017)

4e-80

114) S2859
( NP_838190.1 )

integrase

NC_004741
(Shigella flexneri 2457T)

4e-80

115) SF2680
( NP_708468.1 )

integrase

NC_004337
(Shigella flexneri 301)

4e-80

116) KOX_00140
( YP_005016014.1 )

integrase

NC_016612
(Klebsiella oxytoca KCTC 1686)

2e-79

117) SBOV27691
( YP_008506597.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

1e-78

118) Dd703_3223
( YP_002988808.1 )

integrase

NC_012880
(Dickeya dadantii Ech703)

4e-78

119) intA
( YP_690233.1 )

integrase

NC_008258
(Shigella flexneri 8401)

1e-77

120) HS_1425
( YP_719637.1 )

integrase

NC_008309
(Haemophilus somnus 129PT)

2e-76

121) PAU_01267
( YP_003040104.1 )

prophage cp4-57 integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

9e-76

122) UMN179_00183
( YP_004419117.1 )

integrase

NC_015460
(Gallibacterium anatis UMN179)

3e-70

123) intA
( YP_001336579.1 )

putative integrase

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

4e-69

124) ECUMN_2945
( YP_002413640.1 )

prophage CP4-57 integrase

NC_011751
(Escherichia coli UMN026)

9e-69

125) SARI_00233
( YP_001569322.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

7e-68

126) K756_02865
( YP_008123362.1 )

prophage integrase

NC_021521
(Haemophilus parasuis ZJ0906)

3e-67

127) ETEC_2827
( YP_006116380.1 )

CP4-57 prophage; integrase

NC_017633
(Escherichia coli ETEC H10407)

5e-67

128) intA
( YP_004953281.1 )

prophage CP4-57 integrase

NC_016514
(Enterobacter cloacae EcWSU1)

6e-67

129) P12B_c2755
( YP_006169765.1 )

phage integrase family protein

NC_017663
(Escherichia coli P12b)

6e-67

130) APECO78_16820
( YP_007382529.1 )

Fels-2 prophage protein

NC_020163
(Escherichia coli APEC O78)

1e-66

131) ybl113
( YP_003000246.1 )

ybl113

NC_012892
(Escherichia coli BL21(DE3))

1e-66

132) ECD_02509
( YP_003055099.1 )

Fels-2 prophage protein

NC_012971
(Escherichia coli BL21(DE3))

1e-66

133) ECBD_1066
( YP_003035317.1 )

integrase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

1e-66

134) ECB_02509
( YP_003045698.1 )

Fels-2 prophage protein

NC_012967
(Escherichia coli REL606)

1e-66

135) EcE24377A_2905
( YP_001463940.1 )

phage integrase

NC_009801
(Escherichia coli E24377A)

2e-66

136) SeSA_A2892
( YP_002115704.1 )

phage integrase family protein

NC_011094
(Salmonella enterica CVM19633)

2e-66

137) F382_05840
( YP_008234025.1 )

integrase

NC_021743
(Mannheimia haemolytica D153)

3e-66

138) J451_06080
( YP_008222588.1 )

integrase

NC_021739
(Mannheimia haemolytica D174)

3e-66

139) intA1
( YP_007882001.1 )

prophage CP4-57 integrase IntA

NC_021082
(Mannheimia haemolytica M42548)

3e-66

140) D650_4460
( YP_007665224.1 )

Integrase

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

3e-66

141) N220_11990
( YP_008339812.1 )

integrase

NC_021883
(Mannheimia haemolytica USMARC_2286)

3e-66

142) ECO26_3720
( YP_003230657.1 )

integrase

NC_013361
(Escherichia coli 11368)

4e-66

143) ECO103_3195
( YP_003223080.1 )

integrase

NC_013353
(Escherichia coli 12009)

4e-66

144) EKO11_1119
( YP_005276818.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

4e-66

145) KO11_09745
( YP_006164275.1 )

putative integrase

NC_017660
(Escherichia coli KO11FL)

4e-66

146) ECSE_2904
( YP_002294179.1 )

phage integrase

NC_011415
(Escherichia coli SE11)

4e-66

147) ECW_m2849
( YP_006125503.1 )

putative prophage integrase

NC_017635
(Escherichia coli W)

4e-66

148) WFL_13920
( YP_006174227.1 )

putative integrase

NC_017664
(Escherichia coli W)

4e-66

149) intA
( YP_003500784.1 )

phage integrase family protein

NC_013941
(Escherichia coli CB9615)

5e-66

150) LY180_13435
( YP_008565763.1 )

integrase

NC_022364
(Escherichia coli LY180)

5e-66

151) ECO55CA74_15575
( YP_006160240.1 )

phage integrase family protein

NC_017656
(Escherichia coli RM12579)

5e-66

152) Ser39006_1293
( YP_008521675.1 )

protein of unknown function DUF4102

NC_022268
(Serratia sp. ATCC 39006)

7e-66

153) EC042_2820
( YP_006097122.1 )

integrase

NC_017626
(Escherichia coli 042)

9e-66

154) PAJ_2203
( YP_005935079.1 )

phage integrase family protein

NC_017531
(Pantoea ananatis AJ13355)

1e-65

155) J450_05365
( YP_008220112.1 )

integrase

NC_021738
(Mannheimia haemolytica D171)

2e-65

156) Y11_42091
( YP_006007708.1 )

phage integrase

NC_017564
(Yersinia enterocolitica Y11)

3e-65

157) YE105_C3094
( YP_004299291.1 )

putative prophage integrase

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-64

158) YE0993
( YP_001005326.1 )

putative prophage integrase

NC_008800
(Yersinia enterocolitica 8081)

1e-64

159) AHML_14825
( YP_008044080.1 )

phage integrase

NC_021290
(Aeromonas hydrophila ML09-119)

1e-63

160) SEEH1578_22495
( YP_008248548.1 )

integrase-like protein

NC_021810
(Salmonella enterica 41578)

4e-55

161) CFSAN001921_03425
( YP_008254088.1 )

integrase

NC_021814
(Salmonella enterica CFSAN001921)

4e-55

162) CFSAN002069_18585
( YP_008252471.1 )

integrase

NC_021812
(Salmonella enterica CFSAN002069)

4e-55

163) STM2740
( NP_461667.1 )

integrase-like protein

NC_003197
(Salmonella enterica LT2)

4e-55

164) STM474_2874
( YP_005243722.1 )

integrase-like protein

NC_016857
(Salmonella enterica ST4/74)

4e-55

165) STU288_13860
( YP_007903863.1 )

integrase-like protein

NC_021151
(Salmonella enterica U288)

4e-55

166) STMUK_2728
( YP_005253234.1 )

integrase-like protein

NC_016863
(Salmonella enterica UK-1)

4e-55

• Sequence Alignments

1) O3Y_08515 in NC_016944


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  651 bits (2460),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/411 (100%), Positives = 411/411 (100%), Gaps = 0/411 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180
            EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300
            HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

2) VCM66_1697 in NC_012578


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  651 bits (2460),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/411 (100%), Positives = 411/411 (100%), Gaps = 0/411 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180
            EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300
            HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

3) VCD_002626 in NC_012668


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  651 bits (2460),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/411 (100%), Positives = 411/411 (100%), Gaps = 0/411 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180
            EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300
            HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

4) Vch1786_I1253 in NC_016445


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  651 bits (2460),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/411 (100%), Positives = 411/411 (100%), Gaps = 0/411 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180
            EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300
            HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

5) VC1758 in NC_002505


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  651 bits (2460),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/411 (100%), Positives = 411/411 (100%), Gaps = 0/411 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180
            EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300
            HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

6) VC395_1873 in NC_012582


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  651 bits (2460),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/411 (100%), Positives = 411/411 (100%), Gaps = 0/411 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180
            EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300
            HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

7) VC0395_A1357 in NC_009457


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  651 bits (2460),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/411 (100%), Positives = 411/411 (100%), Gaps = 0/411 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180
            EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300
            HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

8) VV2262 in NC_005139


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  620 bits (2341),  Expect = 7e-179, Method: Compositional matrix adjust.
 Identities = 381/407 (94%), Positives = 400/407 (99%), Gaps = 0/407 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRTSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVR SNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkMLADGIDPQLAKEEQKAKVIVEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARK LADGIDPQLAKEEQKAK I EQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLNGNWRKLELYAFPKLGTIPVSKITAPIAIAALRPVETQGLLETVKRTAQLMNEIMN  180
            EKTL+GNWRKLELYAFPKLG+IPVSK+TAP+AIAALRP+E+QGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHSNPLSGIRDVFKKHKVVHMKALQPHEMHELIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIH+NPL+GIRDVFKKHKVVHMKALQPHEMH+LIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMENQLWIIPKERMKMNREHVVPLTTQTLAILEAIKPISGHRD  300
            HTMVRPNEASGARWEEIDM N+LWIIPKERMKMNREHVVPLT+QTLAILEAIKPISGHR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  YIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFDADVIEAALAH  360
            +IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGF++DVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIDKSSYGSYSVTGSHHLR  407
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHI+KSSYGSYSV+G+  L+
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLH  407

9) VCLMA_A1534 in NC_017270


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  616 bits (2327),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 389/392 (99%), Positives = 392/392 (100%), Gaps = 0/392 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPIAIAALRPIESQGLLETVKRTAQLMNEIMN  180
            EKTLEGNWRKLELYAFPKLGSIPVSKLTAP+AIAALRPIESQGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHIVPLTAQTLAILEAIKPISGHRE  300
            HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREH+VPLTAQTLAILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FIFPSSRNPKVPTDSETANKALSRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            FIFPSSRNPKVPTDSETANKAL+RMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEK  392
            TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEK
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEK  392

10) VAA_00084 in NC_015633


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  603 bits (2278),  Expect = 6e-174, Method: Compositional matrix adjust.
 Identities = 386/411 (94%), Positives = 405/411 (99%), Gaps = 0/411 (0%)

Query  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRTSNSRSWQFRYKRPGQDKITYLSFGTY  60
            MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVR SNSRSWQFRYKRPGQDKITYLSFGTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  61   PDMSlaearekalearkMLADGIDPQLAKEEQKAKVIVEQNATFKFVAEQWKATKEGQIK  120
            PDMSLAEAREKALEARK LADGIDPQLAKEEQKAK I EQNATFKFVAEQWKATKEGQIK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  121  EKTLNGNWRKLELYAFPKLGTIPVSKITAPIAIAALRPVETQGLLETVKRTAQLMNEIMN  180
            EKTL+GNWRKLELYAFPKLG+IPVSK+TAP+AIAALRP+E+QGLLETVKRTAQLMNEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  181  YAVNSGVIHSNPLSGIRDVFKKHKVVHMKALQPHEMHELIRTVATANIQHVTRFLIEWQL  240
            YAVNSGVIH+NPL+GIRDVFKKHKVVHMKALQPHEMH+LIRTVATANIQHVTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  241  HTMVRPNEASGARWDEIDIANRLWIIPKERMKMNREHLVPLTDQTMAILEAIKPISGHRE  300
            HTMVRPNEASGARW+EID+ N+LWIIPKERMKMNREH+VPLT QT+AILEAIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  301  FVFPSSRNPKVPTDSETANKALSRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360
            F+FPSSRNPKVPTDSETANKAL+RMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  361  TDKNQIRKAYNRTDYLDSRRRLMSWWSEHIEKssygsysvagagyLHLIKA  411
            TDKNQIRKAYNRTDYLDSRR+LMSWWSEHIEKSSYGSYSVAG+GYLHL+KA
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

11) Sbal175_2428 in NC_017571


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  478 bits (1801),  Expect = 3e-136, Method: Compositional matrix adjust.
 Identities = 280/401 (70%), Positives = 347/401 (87%), Gaps = 0/401 (0%)

Query  5    TNKLTAKTVVNAKPKDKPYRLSDGGGLYLYVRSAAAVSWEFRYIRPSTSKPTYFGLGSYP  64
            +N+LTA+ +  AKPKDK YRLSDGG LY+ VR++ + SW+FRY RP+  K TY+++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSlaeareraliarKQVADAIDPQLLKVENKLKASTENAQTLKHIAQMWMDAKQGSIKA  124
            D+SLAEARE+AL ARKQ+AD+IDPQL K E+K K+ TE+  T+K +A+ W  +K+G IK 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  KTIEGNWRKLELYAFPKLGGIAVSKLTAPMAIAALKPLEQKGRLETVKRTAQLLNEIMSY  184
            KT+EGNWRKLELYAFPKLG+I+VSKLTAPMAIAAL+P+E +G LETVKRTAQL+NEIM+Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  SVNSGLIHSNPLSGIREVFRKSKVEHMKALKPHELTELLQTVATANLQLTTRCLIEWQLH  244
            +VNSG+IH+NPL+GIR+VF+K KV HMKAL+PHE+ +L++TVATAN+Q  TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMARPNEAAGTRWDEIDLEAKLWVIPETRMKMKREHVIPLTEHMIAILEAIKPISGHCEF  304
            TM RPNEA+G+RW+EID+  KLW+IP  RMKM+REHV+PLT + +AILEAIKPISGH EF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSSKDPKKHTDSETINKALGRMGFKGRTTAHGLRSLASTTLNEQGFDADVIEAALAHV  364
            +FPSS++PK  TDSET NKALGRMGFK+RTTAHGLR+LASTTLNEQGF++DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNQIRSAYNRTTYLERRMKLMDWWSNHIASAAIGSLSVTG  405
            DKNQIR AYNRT YL+ R KLM WWS+HI  ++ GS SV+G
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

12) Shewmr7_1761 in NC_008322


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  458 bits (1727),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 268/403 (67%), Positives = 341/403 (85%), Gaps = 1/403 (0%)

Query  5    TNKLTAKAVLNAKAEAKPYRLSDGGNLYLYVR-TAGKTWEFRYIRPSTSKPTYFGLGSYP  63
            +N+LTA+ +  AK+  K YRLSDGGNLY+ VR + +++W+FRY RP+  K TY+++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  64   DVSLAEARDKALEARKNLAEGIDPQLLKVENKLKAATENAQTLKHIAQMWMDSKQGSIKP  123
            D+SLAEAR+KALEARK+LA+GIDPQL K E+K K+ TE+  T+K +A+ W  +K+G IK 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  124  KTIEGNWRKLELYAFPKLGSIAISRLTAPIAIAALKPLEQKGHLETVKRTAQLLNEIMNY  183
            KT+EGNWRKLELYAFPKLGSI++S+LTAP+AIAAL+P+E +G LETVKRTAQL+NEIMNY
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  184  SVNSGYIHANPLSGIREVFRKSKVEHlkalkpaelaellQTVANANLLLTTRCLIEWQLH  243
            +VNSG IHANPL+GIR+VF+K KV H+KAL+P E+ +L++TVA AN+   TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  244  TMTRPNEAAGARWEEIDFDAKLWTIPESRMKMNREHIIPLTEHTLAILETVKPIGEHSQF  303
            TM RPNEA+GARWEEID   KLW IP  RMKMNREH++PLT +TLAILE++KPI+ H +F
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  304  VFPSSKDPKKHTDPETINKALGRMGLKGRTTGHGLRSLASTTLNEQGFDGDVIEAALAHV  363
            +FPSS++PK  TD+ET NKALGRMG+K+RTT+HGLR+LASTTLNEQGF+ DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  364  DKNQIRSAYDRTTYLERRTKLMEWWSNHIATAAVGSLSVTAGS  406
            DKNQIR AY+RT YL+ R KLM WWS+HI  ++ GS SV++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

13) Shewmr4_1686 in NC_008321


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  455 bits (1716),  Expect = 2e-129, Method: Compositional matrix adjust.
 Identities = 266/403 (67%), Positives = 342/403 (85%), Gaps = 1/403 (0%)

Query  5    TNKLTAKAVLNAKAEAKPYRLSDGGNLYLYVR-TAGKTWEFRYIRPSTSKPTYFGLGSYP  63
            +N+LTA+ +  AK+  K YRLSDGGNLY+ VR + +++W+FRY RP+  K TY+++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  64   DVSLAEARDKALEARKNLAEGIDPQLLKVENKLKAATENAQTLKHIAQMWMDSKQGSIKP  123
            D+SLAEAR+KALEARK+LA+GIDPQL K E+K K+ TE+  T+K +A+ W  +K+G IK 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  124  KTIEGNWRKLELYAFPKLGSIAISRLTAPIAIAALKPLEQKGHLETVKRTAQLLNEIMNF  183
            KT+EGNWRKLELYAFPKLGSI++S+LTAP+AIAAL+P+E +G LETVKRTAQL+NEIMN+
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  184  SVNSGYIHANPLSGIREVFRKSKVEHlkalkpaelaellQTIANANLLLTTRCLIEWQLH  243
            +VNSG IHANPL+GIR+VF+K KV H+KAL+P E+ +L++T+A AN+   TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  244  TMTRPNEAAGARWEEIDFDAKLWTIPESRMKMNREHIIPLTEHTLAILETVKPISEQSQF  303
            TM RPNEA+GARWEEID   KLW IP  RMKMNREH++PLT +TLAILE++KPIS + +F
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  304  VFPSSKDPQKHTDPETINKALGRMGLKGRTTGHGLRSLASTTLNEQGFDGDVIEAALAHV  363
            +FPSS++P+  TD+ET NKALGRMG+K+RTT+HGLR+LASTTLNEQGF+ DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  364  DKNQIRSAYNRTTYLERRTKLMEWWSNHIATAAVGSLSVTASS  406
            DKNQIR AYNRT YL+ R KLM WWS+HI  ++ GS SV++++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

14) Shewana3_1791 in NC_008577


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  454 bits (1712),  Expect = 4e-129, Method: Compositional matrix adjust.
 Identities = 265/403 (66%), Positives = 341/403 (85%), Gaps = 1/403 (0%)

Query  5    TNKLTAKAVLNAKAEAKPYRLSDGGNLYLYVR-TAGKTWEFRYIRPSTSKPTYFGLGSYP  63
            +N+LTA+ +  AK+  K YRLSDGGNLY+ VR + +++W+FRY RP+  K TY+++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  64   DVSLAEARDKALEARKNLAEGIDPQLLKVENKLKAATENAQTLKHIAQMWMDSKQGSIKP  123
            D+SLAEAR+KALEARK+LA+GIDPQL K E+K K+ TE+  T+K +A+ W  +K+G IK 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  124  KTIEGNWRKLELYAFPKLGSIAISRLTAPIAIAALKPLEQKGHLETVKRTAQLLNEIMNF  183
            KT+EGNWRKLELYAFPKLGSI++S+LTAP+AIAAL+P+E +G LETVKRTAQL+NEIMN+
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  184  SVNSGYIHANPLSGIREVFRKSKVEHlkalkpaelaellQTIANANLLLTTRCLIEWQLH  243
            +VNSG IHANPL+GIR+VF+K KV H+KAL+P E+ +L++T+A AN+   TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  244  TMTRPNEAAGARWEEIDFDAKLWTIPESRMKMNREHIIPLTEHTLTILETVKPISEQSQF  303
            TM RPNEA+GARWEEID   KLW IP  RMKMNREH++PLT +TL+ILE++KPIS + +F
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  304  VFPSSKDPQKHTDPETINKALGRMGLKGRTTGHGLRSLASTTLNEQGFDGDVIEAALAHV  363
            +FPSS++P+  TD+ET NKALGRMG+K+RTT+HGLR+LASTTLNEQGF+ DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  364  DKNQIRSAYNRTTYLERRTKLMEWWSNHIATAAVGSLSVTAGS  406
            DKNQIR AYNRT YL+ R KLM WWS+HI  ++ GS SV++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

15) VP1077 in NC_004603


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  405 bits (1525),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 231/407 (57%), Positives = 316/407 (78%), Gaps = 1/407 (0%)

Query  4    LIHRLKDKEIEQAQGRDRIYRLPDGGGLYLLVKPNNLKYWEFRYTKPGTKNRTFLGLGSL  63
            + + L  ++I+ A+ +D++YRL+DGG LY+ V+P+N + W+FRY +PG  + T+L++G+ 
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   DMLNVDGARDKAFEMRKLLKEGIDPKLDRIEKRTQIQQEQACTFKSVADEW-Vktktklk  122
              +++  AR+KA+E RK L +GIDP+L + E++++   EQ  TFK VA++W      ++K
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  123  pktVQGNWRKLELYAFPKFGEIPVKSLTPIIVQEAFRPIARRGKLETVKRTIQLVNEIMR  182
             KT++GNWRKLELYAFPK+G IPV  LT+ +   A+RPI  +G LETVKRT QL+NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  183  FAINSGLIQHNVLSGVGETFASPDVKHMAVLKPDELTELLQTVATANMQLATKCLIEWQL  242
            +A+NSG+I+ N L+G+ + F    V HM  L+P+E+ +L++TVATAN+Q  T+ LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  243  HTMTRPSEAAGARWDEIDIENRLWIIPDTRMKMKREHRIPLTDQTIAILERIHPISGHRV  302
            HTM RP+EA+GARW+EID+ N+LWIIP  RMKM+REH +PLT QT+AILE I PISGHR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  303  HVFPSMRFPKRSIDSETINKALGRIGFKDRTTAHGMRSLASTTLNERGFDPDIIEAALAH  362
             +FPS R PK + DSET NKALGR+GFKDRTTAHG+R+LASTTLNE+GF+PD+IEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  363  QDRNAIRAAYNRTDYLERRRKMMEWWSSYIDDAAVGSLSVTGAVHLR  409
             D+N IR AYNRTDYL+ RRK+M WWS  I+ ++ GS SV+G+  L+
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLH  407

16) VAA_01208 in NC_015633


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  384 bits (1445),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 220/408 (54%), Positives = 302/408 (75%), Gaps = 0/408 (0%)

Query  5    ATRLTSKAITNAKPKEKDYVLSDGDGLQLRVRTNGSRLWNFNYRHPITKKRINMGLGAFP  64
            A  LT++ I  AKPK+K Y LSDG+ L + VR + SR W+F Y++P   K   +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ELSLANARKKTIEARELVADGIDPKEARDSKLSEMQKELEDTLLNLAKEWFERKKESVTP  124
            ++SLA+AR K++EAR  +ADGIDP+ A++ + +    E + T+  +A +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  NYADDIWRSLELHVFPQIANTPVKDIDAPLVIDLLRPIEAKGSLETVKRLSQRLNEIMNY  184
            +  ++ WR LEL  FP++++ PV  + AP+ I  LRPIE++G LETVKR +Q +NEIMNY
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AANCGLVKANPLTGIRAAFKKPKKENMAALAPDELPELMGAIANASIKRTTRCLIEWQLH  244
            A N G++ ANPL+GIR  FKK K  +M AL P+E+ +L+ ++A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPSEAAGARWDEIEWEEKIWTIPAERMKKRREHRIPLTEQMLALLEVIKPISGHREY  304
            TM RP+EA+GARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE IKPISGHRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSDRDPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDRDLIEASLAHV  364
            IFPS R+PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+ D+IEA+LAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DDNQVRSAYNRTDYLERRRPMMSWWSGHIETAAKGSLSVTGTKQLKVI  412
            D NQ+R AYNRTDYL+ RR +MSWWS HIE ++ GS SV+GT  L ++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

17) intA in NC_004347


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 221/401 (56%), Positives = 305/401 (77%), Gaps = 0/401 (0%)

Query  4    LTKPLSDTEIKTAKPKDKEYNLADGGGLQIRIKPNGSKLWLLNYSHPITKKRQNLSLGTY  63
            +++ L+  +I+TAKPKDK Y L+DGG L + ++P+ S+ W + Y +P   K   LS+GTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PDISLLSARKLAQEARTLLAHGTDPkahreaqiaakaaiiehTFGKIAAEWFERKKDEVT  123
            PD+SL  AR  A EAR  LA+G DP+  +E Q A   +  + TF  +A +W   K +++ 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  EDHAAATWRSFKLHLLPSLKDIPISQITAPMVIEFLRPIEAKGNLETVKRLTQRLNEVMI  183
            E    + WR + L  +P L  IP+S++TAPM I  LRPIE++G LETVKR +Q +NE+M 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAVNTGLIHANPLSGIKAIFKKPRKEHLAALKPDELPELMQAIANASIKKVTRFLIEWQL  243
            YAVN+G+IHANPL+GI+ +FKK +  H+ AL+P+E+ +L++++A A+I+ VTRFLIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  HTMTRPNEAAAARWDEINFDERIWLIPAARMKMRRDHQIPLTEQTLALLAAIKPISGHRE  303
            HTM RPNEA++ARW+EI+  +++W+IP  RMKM R+H +PLT QTLA+L AIKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  YIFPADRDPKTHSNVQTANAALKRMGLKDRTTAHGFRSLASTTLNEQGFDPDVIEAALAH  363
            +IFP+ R+PK  ++ +TAN AL RMG+KDRTTAHG+R+LASTTLNEQGF+PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  TDKNQVRSAYNRSIYLDRRREMMTWWSNYIVEAAKGNVSLA  404
            TDKNQ+R AYNR+ YLD RR +M+WWS+ I  ++ G+ S+A
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVA  401

18) N175_11380 in NC_022223


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  381 bits (1434),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 219/408 (54%), Positives = 301/408 (74%), Gaps = 0/408 (0%)

Query  5    ATRLTSKAITNAKPKEKDYVLSDGDGLQLRVRTNGSRLWNFNYRHPITKKRINMGLGAFP  64
            A  LT++ I  AKPK+K Y LSDG+ L + VR + SR W+F Y++P   K   +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ELSLANARKKTIEARELVADGIDPKEARDSKLSEMQKELEDTLLNLAKEWFERKKESVTP  124
            ++SLA+AR K++EAR  +ADGIDP+ A++ + +    E + T+  +A +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  NYADDIWRSLELHVFPQIANTPVKDIDAPLVIDLLRPIEAKGSLETVKRLSQRLNEIMNY  184
            +  ++ WR LEL  FP++++ PV  + AP+ I  LRPIE++G LETVKR +Q +NEIMNY
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AANCGLVKANPLTGIRAPFKNPKKKKMAALAPDELPELMGAIANASIKRTTRCLIEWQLH  244
            A N G++ ANPL+GIR  FK+ K   M AL P+E+ +L+ ++A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPSEAAGARWDEIEWEEKIWTIPAERMKKRREHRIPLTEQMLALLEVIKPISGHREY  304
            TM RP+EA+GARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE IKPISGHRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSDRDPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDRDLIEASLAHV  364
            IFPS R+PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+ D+IEA+LAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DDNQVRSAYNRTDYLERRRPMMSWWSGHIETAAKGSLSVTGTKQLKVI  412
            D NQ+R AYNRTDYL+ RR +MSWWS HIE ++ GS SV+GT  L ++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

19) int in NC_011312


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  377 bits (1418),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 216/408 (53%), Positives = 301/408 (74%), Gaps = 0/408 (0%)

Query  5    TTRLNNKQIDNAKEREKDYVLSDGEGLQLRIRTNGSKLWNFNYIHPQTKKRLNMGLGSYP  64
            +  L  +QI+ AK ++K Y LSDG  L + +R + S+ W+F Y +P   K   +++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SLSLANARKLTVSARELVAQGIDPKEHRDEKKHQDLIIHEHTFFNVATEWFERKKDDITV  124
             +SLA+AR  ++ AR  +A+GIDP+  ++E+K + +  ++ TF  VA +W   K ++I  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAQDVWRSLELHIFPILKSTPVSQITAPMIIELLRPIEAKGSLETVKRLTQRLNEIMTY  184
               ++ WR LEL  FP L S PVS++TAPM I  LRPIE++G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  SVNCGLIHANPLAGIKAAFKKPKKENMAALKPDELPELMIAIANASIKRTTRCLIEWQLH  244
            +VN G+IHANPLAGI+  FKK K  +M AL+P+E+ +L+ ++A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPSEAAGTRWEEIDLEKGIWTIPPERMKKRREHRIPLTAQALSLLEVMKPISAHREF  304
            TM RP+EA+G+RWEEID+ + +W IP ERMK  REH +PLTAQ+L++LE +KPIS+HREF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSDRAPLKPSNSQTANMAIKRMGFAGRLVSHGLRSVASTTLNEQGFESDLIEAALAHV  364
            +FPS R P  P++S+TAN A+ RMGF +R  +HGLR++ASTTLNEQGFE+D+IEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DDSQVRAAYNRTDYLERRIPMMKWWSGHIEEASKGSLSISGMKCLSLV  412
            D +Q+R AYNRTDYL+ R  +M WWS HIE +S GS S++G   L L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

20) Shewmr7_2855 in NC_008322


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  376 bits (1415),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 211/400 (53%), Positives = 301/400 (76%), Gaps = 0/400 (0%)

Query  6    TKQISDTEIRAAKPKEKEYNLFDGLGLRLRIKPNGSKLWLLNYTRPTDKKRTNLSLGSYP  65
            +++++  +I++AKPK+K Y L DG  L + ++P+ S+ W + Y RP + K T LS+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  66   EISLAKARALVLDARTLLAQNIDPKIHKDQTVAAETALKVNTFEKVAGDWYEIKRDSITA  125
            ++SLA AR   L+AR  LA+ IDP++ K++  A   + +  TF  VA +W   K + I  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  126  EHAAKTWSSLELHILPYLGKTPIGQITAPMVIKIFRPLEAKGTLETVKRLSQRINEIMIF  185
                  W  LEL  +P LG  P++++TAPM I  +RP+E++G LETVKR +Q +NEIM +
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  186  AVNTGLIHANPLSGIKAAFKKPKKQNMAAMPPAELPELMRTIANASIRRTTRFLIEWQLH  245
            AVN+G+IHANPL+GI+  FKK K  +M A+ P E+ +L+RT+A A+I++ TRFLIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  246  TMTRPNEAAAARWDEIDINERLWVIPAERMKMNREHIIPLSDECLAILKALKLISGNREY  305
            TM RPNEA++ARW+EID+ ++LW+IP ERMKMNREH++PL+ + LAIL A+K ISG+RE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  306  LFPADRDPKTHCNVQTANAALKRMGLQDRTTAHGLRSLASTTLNEQGFDWDVVEAALAHT  365
            +FP+ R+PK   + +TAN AL RMG++DRTTAHGLR+LASTTLNEQGF+ DV+EAALAHT
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  366  DRNQVRSAYNRAKYLERRKEMMDWWSKHIVKAAISNASLA  405
            D+NQ+R AYNR+ YL+ R+ +M WWS HI K++ ++ S+A
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVA  401

21) O3Y_03945 in NC_016944


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  376 bits (1413),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 213/400 (54%), Positives = 293/400 (74%), Gaps = 0/400 (0%)

Query  7    KLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDI  66
            +LT ++I+++KP++K Y L DG+ L + ++P+ S+ W F Y RP ++K + LSFG YPD+
Sbjct  4    NLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  67   SLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDY  126
            SL +AR   L A+  +A+GIDPQ  +  Q+      ++ TF  V+ +W A K+ ++    
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  127  ALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFAT  186
              + WR LEL  FP ++  PV  +TAP  I  L+PIE++G LETVKR +Q +NE+MN+A 
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  187  NCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLEWQLHTM  246
            N G+I+ANPL+GI+  FKK K  +M AL P E+ +L+ ++A A+I++ TR L+EWQLHTM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  247  TRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDFIF  306
             RP EASGARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE +KPISGHR+FIF
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  307  PSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESALAHVDD  366
            PS R PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+PD++E+ALAH D 
Sbjct  304  PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK  363

Query  367  NQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGT  406
            NQ+R AYNRTDYL+ R+ +M WWSEHIE ++ GS SV+GT
Sbjct  364  NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGT  403

22) VCM66_0804 in NC_012578


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  376 bits (1413),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 213/400 (54%), Positives = 293/400 (74%), Gaps = 0/400 (0%)

Query  7    KLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDI  66
            +LT ++I+++KP++K Y L DG+ L + ++P+ S+ W F Y RP ++K + LSFG YPD+
Sbjct  4    NLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  67   SLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDY  126
            SL +AR   L A+  +A+GIDPQ  +  Q+      ++ TF  V+ +W A K+ ++    
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  127  ALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFAT  186
              + WR LEL  FP ++  PV  +TAP  I  L+PIE++G LETVKR +Q +NE+MN+A 
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  187  NCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLEWQLHTM  246
            N G+I+ANPL+GI+  FKK K  +M AL P E+ +L+ ++A A+I++ TR L+EWQLHTM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  247  TRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDFIF  306
             RP EASGARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE +KPISGHR+FIF
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  307  PSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESALAHVDD  366
            PS R PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+PD++E+ALAH D 
Sbjct  304  PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK  363

Query  367  NQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGT  406
            NQ+R AYNRTDYL+ R+ +M WWSEHIE ++ GS SV+GT
Sbjct  364  NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGT  403

23) Vch1786_I0352 in NC_016445


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  376 bits (1413),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 213/400 (54%), Positives = 293/400 (74%), Gaps = 0/400 (0%)

Query  7    KLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDI  66
            +LT ++I+++KP++K Y L DG+ L + ++P+ S+ W F Y RP ++K + LSFG YPD+
Sbjct  4    NLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  67   SLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDY  126
            SL +AR   L A+  +A+GIDPQ  +  Q+      ++ TF  V+ +W A K+ ++    
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  127  ALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFAT  186
              + WR LEL  FP ++  PV  +TAP  I  L+PIE++G LETVKR +Q +NE+MN+A 
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  187  NCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLEWQLHTM  246
            N G+I+ANPL+GI+  FKK K  +M AL P E+ +L+ ++A A+I++ TR L+EWQLHTM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  247  TRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDFIF  306
             RP EASGARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE +KPISGHR+FIF
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  307  PSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESALAHVDD  366
            PS R PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+PD++E+ALAH D 
Sbjct  304  PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK  363

Query  367  NQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGT  406
            NQ+R AYNRTDYL+ R+ +M WWSEHIE ++ GS SV+GT
Sbjct  364  NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGT  403

24) VC0847 in NC_002505


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  376 bits (1413),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 213/400 (54%), Positives = 293/400 (74%), Gaps = 0/400 (0%)

Query  7    KLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDI  66
            +LT ++I+++KP++K Y L DG+ L + ++P+ S+ W F Y RP ++K + LSFG YPD+
Sbjct  4    NLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  67   SLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDY  126
            SL +AR   L A+  +A+GIDPQ  +  Q+      ++ TF  V+ +W A K+ ++    
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  127  ALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFAT  186
              + WR LEL  FP ++  PV  +TAP  I  L+PIE++G LETVKR +Q +NE+MN+A 
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  187  NCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLEWQLHTM  246
            N G+I+ANPL+GI+  FKK K  +M AL P E+ +L+ ++A A+I++ TR L+EWQLHTM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  247  TRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDFIF  306
             RP EASGARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE +KPISGHR+FIF
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  307  PSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESALAHVDD  366
            PS R PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+PD++E+ALAH D 
Sbjct  304  PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK  363

Query  367  NQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGT  406
            NQ+R AYNRTDYL+ R+ +M WWSEHIE ++ GS SV+GT
Sbjct  364  NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGT  403

25) VC395_0863 in NC_012582


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  376 bits (1413),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 213/400 (54%), Positives = 293/400 (74%), Gaps = 0/400 (0%)

Query  7    KLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDI  66
            +LT ++I+++KP++K Y L DG+ L + ++P+ S+ W F Y RP ++K + LSFG YPD+
Sbjct  4    NLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  67   SLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDY  126
            SL +AR   L A+  +A+GIDPQ  +  Q+      ++ TF  V+ +W A K+ ++    
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  127  ALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFAT  186
              + WR LEL  FP ++  PV  +TAP  I  L+PIE++G LETVKR +Q +NE+MN+A 
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  187  NCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLEWQLHTM  246
            N G+I+ANPL+GI+  FKK K  +M AL P E+ +L+ ++A A+I++ TR L+EWQLHTM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  247  TRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDFIF  306
             RP EASGARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE +KPISGHR+FIF
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  307  PSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESALAHVDD  366
            PS R PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+PD++E+ALAH D 
Sbjct  304  PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK  363

Query  367  NQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGT  406
            NQ+R AYNRTDYL+ R+ +M WWSEHIE ++ GS SV+GT
Sbjct  364  NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGT  403

26) VC0395_A0372 in NC_009457


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  376 bits (1413),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 213/400 (54%), Positives = 293/400 (74%), Gaps = 0/400 (0%)

Query  7    KLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDI  66
            +LT ++I+++KP++K Y L DG+ L + ++P+ S+ W F Y RP ++K + LSFG YPD+
Sbjct  4    NLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  67   SLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDY  126
            SL +AR   L A+  +A+GIDPQ  +  Q+      ++ TF  V+ +W A K+ ++    
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  127  ALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFAT  186
              + WR LEL  FP ++  PV  +TAP  I  L+PIE++G LETVKR +Q +NE+MN+A 
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  187  NCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLEWQLHTM  246
            N G+I+ANPL+GI+  FKK K  +M AL P E+ +L+ ++A A+I++ TR L+EWQLHTM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  247  TRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDFIF  306
             RP EASGARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE +KPISGHR+FIF
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  307  PSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESALAHVDD  366
            PS R PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+PD++E+ALAH D 
Sbjct  304  PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK  363

Query  367  NQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGT  406
            NQ+R AYNRTDYL+ R+ +M WWSEHIE ++ GS SV+GT
Sbjct  364  NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGT  403

27) VV0817 in NC_005139


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  373 bits (1403),  Expect = 9e-105, Method: Compositional matrix adjust.
 Identities = 221/408 (55%), Positives = 295/408 (73%), Gaps = 0/408 (0%)

Query  9    TKPLTATEVKNAKPKEKEYSLVDGQGLKLRVLPSGSKQWQLNYYRPTNGKRANLNLGRYP  68
            ++ LTA +++ AKPK+K Y L DG  L + V PS S+ WQ+ Y RP ++K + L++G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  69   DVSLVQARKSALEARELIAQRIDPQEHKERKLQEHKAIHEHTFLNVSKEWFEIKKHDITP  128
            D+SL +AR  ALEAR  +A+ IDPQ  KE +     + ++ TF  V+ +W   K  +I  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  129  DYAVDIWRSLDLHIFPSLADTPVKQITAPQVIDLLKPIEAKGSLETVKRLVQRLNEVMNY  188
                + WR L+L  FP L+  PV ++TAP  I  L+PIE++G LETVKR  Q +NE+MNY
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  189  SANCGLIQANPLIGIRAAFKKPKKENMAALAPTELPELMGAIANASIKRTTRCLIEWQLH  248
            + N G+I+ANPL GIR  FKK K  +M AL P E+ +L+ ++A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  249  TMTRPSEASGARWDEIEWEEKIWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHREF  308
            TM RP+EASGARW+EI+  +K+W IP ERMK  REH +PLT Q LA+LE +KPISGHREF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  309  IFPSDRDPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQSFDRDLIETSLAHV  368
            IFPS R+PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQ+F+ D+IE++LAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  369  DDNQVRSAYNRTDYLERRRPMMSWWSGHIEEAAKGSLSVTGTKQLKVI  416
            D NQ+R AYNRTDYL+ RR +MSWWS HIE ++ GS SV+GT  L ++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

28) B479_23050 in NC_019905


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  371 bits (1396),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 203/401 (51%), Positives = 293/401 (74%), Gaps = 0/401 (0%)

Query  5    ATRLSELKVKSAKPAEKDYVLFDGGGLQMRVRSNGSKLWNFNYRHPVTKKRINMGLGTFP  64
            A  L+  ++++AKP +K Y L DGG L   VR++ S+ W+F Y++P   K   +++GT+P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLAQARKGSVEAREALAHGIDPKEKRDAVLQAKQAATEHTFQNVATSWYELKKDAVTP  124
            ++SLA+AR  ++EAR  LA+GIDP+  ++       +  + TF+ VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHIFPDLGATPISAISAPQVINLLRPLETKGSLETVKRLTQRLNEIMTY  184
               E+ WR L L  FP LG+ P+S ++AP  I  LRP+E++G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGLIHANPLSGIRSVFKKPKKKNMAALPPDELKELMVAIANASIKRTTRCLIEWQLH  244
            +VNSG+IHANPL+GIR VFKK K  +M AL P+E+ +L+ ++A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPVEAATTRWADIDIEKKIWTIPAERMKKRRAHIVPLTDQALALLEAIKPYSGHREF  304
            TM RP EA+ +RW +ID+ +K+W IP ERMK  R H+VPLT Q+LA+LEAIKP SGHREF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPADRNPRTHCNSQTANMALKRMGFAGRLVSHGMRSMASTILNEHGWDPELIEVALAHV  364
            +FP+ RNP+   +S+TAN AL RMGF +R  +HG+R++AST LNE+G +P++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRADYIERRRPLMAWWSDHIQEAATGNLSVSA  405
            DK+++R AYNR+DY++ RR LM+WWS+HI+ ++ G+ SV++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

29) Shewmr4_2777 in NC_008321


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  368 bits (1384),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 210/408 (52%), Positives = 296/408 (73%), Gaps = 0/408 (0%)

Query  4    ITTRLTDKEIKTAKPRDKEYNLFDGDGLRLRIKPNGSKQWILNYYKPTNRKRANLSLGKY  63
            ++  LT ++I+TAKP+DK Y L DG+ L + ++P+ S+ W + Y +P + K + LS+G Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PDLSLANARKLSLEARELIAQNIDPQDARKERQQEVDAIHLHTFYNVAKEWFDMKKDSVS  123
            PD+SLA+AR  +LEAR  +A+ IDPQ A+ E++    + +  TF  VA +W   K + + 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  ADHAVDTWRSLELHIFPSLSNTPVKDITAPFVIELLRPIEAKGSLETVKRLSQRLNEVMN  183
                 + WR LEL  FP L++ PV  +TAP  I  LRPIE++G LETVKR +Q +NE+MN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  FATNCGLIKANPLANIKAAFKKPKKENMASLAPAELPELMRSLSYASIKLTTRCLIEWQL  243
            +A N G+I ANPLA I+  FKK K  +M +L P E+ +L+R+++ A+I+  TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  HTMTRPSEAAGARWDEIDLDSRVWTIPAERMKKKREHRIPLTEQMLVLLDLIKPISGHRE  303
            HTM RP+EA+GARW+EID+ +++W IP ERMK +REH +PLT Q L +L+ IKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  YVFPSDREPTKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDRDLVEAALSH  363
            ++FPS R+P  P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+ D++EAAL+H
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  VEENQVRSAYNRTDYLERRRPMMSWWSGHIEEAARGGSALTRTKTLKV  411
             + NQ+R AYNRTDYL+ RR +MSWWS HIE ++ G+ +++ T  L +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHL  408

30) PputGB1_4740 in NC_010322


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  367 bits (1379),  Expect = 8e-103, Method: Compositional matrix adjust.
 Identities = 201/401 (51%), Positives = 292/401 (73%), Gaps = 0/401 (0%)

Query  5    ATRLSELKVKSAKPAEKDYVLFDGGGLQMRVRSNGSKLWNFNYRHPVTKKRINMGLGTFP  64
            A  L+  ++++AKP +K Y L DGG L   VR++ S+ W+F Y++P   K   +++GT+P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLAQARKSSVEAREALAHGIDPKEKRDAVLQAKQAATEHTLQNVATSWYELKKDGVTP  124
            ++SLA+AR  ++EAR  LA+GIDP+  ++       +  + T++ VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHIFPDLGSTPISAIRAPQVINLLRPLETKGSLETVKRLTQRLNEIMTY  184
               E+ WR L L  FP LGS P+S + AP  I  LRP+E++G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGLIHANPLSGIRSVFKKPKKKNMAALPPDELKELMVAIANASIKRTTRCLIEWQLH  244
            +VNSG+IHANPL+GIR VFKK K  +M AL P+E+ +L+ ++A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPVEAATTRWADIDIEKKIWTIPAERMKKRRTHIVPLTEQSLALLEAIKPYSGHREY  304
            TM RP EA+ +RW +ID+ +K+W IP ERMK  R H+VPLT Q+LA+LEAIKP SGHRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPADRNPRTHCNSQTANMALKRMGFEGRLVSHGMRSMASTILNEHGWDPELIEVALAHV  364
            +FP+ RNP+   +S+TAN AL RMGF +R  +HG+R++AST LNE+G +P++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRADYIERRRPMMAWWSDHIQEAATGNLSVSA  405
            DK+++R AYNR+DY++ RR +M+WWS+HI+ ++ G+ SV++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

31) Ping_1601 in NC_008709


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  365 bits (1371),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 219/400 (55%), Positives = 297/400 (75%), Gaps = 4/400 (1%)

Query  8    LTDKKINSAKIHDKDYVLSDGDGLQLRVRSNGSKIWNFNYKHPQTKKRININIGKYPGVA  67
            LT ++I++AK  DK Y LSDG+ L + VR++ S+ W+F YK+P   K   +++G YP+++
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LLNARKKALSYRDLLAQDIDPKENREKKLAEDKKITEH--TVKNVALEWYELKKHSVTAD  125
            L +AR KAL  R  LA++IDP+  +E +    K ITE+  T K VA +W   K   +   
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQ--KAKTITEQNATFKFVAEQWKATKEGQIKEK  122

Query  126  YATDIWRSLDRHIFPLLENTPISSVTAPMVIDLLRPIEAKGSLETVKRLTQRLNEIMTYA  185
               + WR L+   FP L + P+S +TAPM I  LRPIE++G LETVKR +Q +NEIM YA
Sbjct  123  TLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYA  182

Query  186  VNGGLIFANPLSGIKANFKKPKKSHMLALTPDELPELMMTIANASIKRTTRCLIEWQLHT  245
            VN+G+I ANPL+GI+  FKK K  HM AL P+E+ +L+ T+A A+I++ TR LIEWQLHT
Sbjct  183  VNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHT  242

Query  246  MTRPSESAGAKWEEIDIEAKTWTIPPERMKKRREHVVPLTDQALTLLETMRPISGHREYL  305
            M RP+E++GA+WEEID+  K W IP ERMK  REHVVPLT Q+L++LE+++PISGHRE++
Sbjct  243  MVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFI  302

Query  306  FPSDRNPRTHANSETANTALRRMNFGGRLVSHGLRSIASTTLNEQGFEADLVEAALAHVG  365
            FPS RNP+  ++SETAN AL RM F +R  +HGLR++ASTTLNEQGFE+D++EAALAH +
Sbjct  303  FPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTD  362

Query  366  DNQVRNAYNRTDYLERRRPMMYWWSEHIEKASQGNLSVTG  405
             NQ+R+AYNRTDYL+ RR +M WWSEHIEK+S G+ SV+G
Sbjct  363  KNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

32) VCLMA_A0724 in NC_017270


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  362 bits (1360),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 209/400 (53%), Positives = 292/400 (73%), Gaps = 0/400 (0%)

Query  5    TKQLSATEVKNAKAKEKEYYLVDGQGLKLRVLPSGSKQWLFNYYRPTNGKRANLNLGRFP  64
            +++L+A +++ AK+K+K Y L DG  L + V PS S+ W F Y RP ++K + L++G +P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSLVQARKASLNAKELIAQGIDPQDERKRQQQAHKEIHEHTFVNVAKDWFAIKQHDVTP  124
            D+SL +AR  +L+A+  +A+GIDPQ  +  Q+      ++ TF  VA +W A K+ ++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNF  184
                + WR LEL  FP ++  PV  +TAP  I  L+PIE++G LETVKR +Q +NE+MN+
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  ATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMGAIANASIKRTTRCLLEWQLH  244
            A N G+I+ANPL+GI+  FKK K  +M AL P E+ +L+ ++A A+I++ TR L+EWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAEASGARWDEINWEENVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDF  304
            TM RP EASGARW+EI+  +++W IP ERMK  REH +PLT Q LA+LE +KPISGHR+F
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSDRDPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVEAALAHV  364
            +FPS R+PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+PD++EAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DDNQVRSAYNRTDYLERRKPMMCWWSGHIEEAARGSLSVT  404
            D NQ+R AYNRTDYL+ R+ +M WWS HIE ++ GS SV+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVA  401

33) PSEBR_a748 in NC_015379


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  361 bits (1356),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 199/398 (50%), Positives = 288/398 (73%), Gaps = 0/398 (0%)

Query  8    LSELKIKAAKPLEKDYVLVDGDGLQMRVRINGSKLWNFNYYHPVTKKRINMGLGAYPELS  67
            L+  +I++AKP +K Y L DG+ L   VR + S+ W+F Y +P   K   +++G+YP++S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LAQARKMTIKARELLATGIDPKEQRDTLRQSKKAETEHTFQNVATAWYELKKDSVTPAYA  127
            LA+AR  ++ AR  LA GIDP+  ++  +    +E + TF+ VA  W   K + +     
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  EDIWRSLTLHVFSDLGTTPISAIGAPQVINLLRPLETKGSLETVKRLSQRLNEIMTYGVN  187
            E+ WR L L  F+ LG+ P+S + AP  I  LRP+E++G LETVKR +Q +NEIM Y+VN
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  SGLIHANPLSGIRSVFKKPKKKNMAALAPDELKELMMTIANASIKRTTRCLIEWQLNTMT  247
            SG+IHANPL+GIR VFKK K  +M AL P+E+ +L+ T+A A+I++ TR LIEWQL+TM 
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV  244

Query  248  RPAEAATTRWADIDFEKRIWTIPAERMKKRRIHIVPLTEQALALLEAIKPYSGHREYVFP  307
            RP EA+ +RW +ID  +++W IP ERMK  R H+VPLT Q+LA+LEAIKP SGHRE++FP
Sbjct  245  RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP  304

Query  308  ADRNPRTHCNSQTANMALKRMGFEGRLVSHGMRSMASTILNEHGWDPELIEVALAHVDKD  367
            + RNP+   +S+TAN AL RMGF +R  +HG+R++AST LNE+G +P++IE ALAH DK+
Sbjct  305  SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN  364

Query  368  EVRSAYNRADYIERRRPMMAWWSEHIQEAATGNLSVSA  405
            ++R AYNR+DY++ RR +M+WWSEHI+ ++ G+ SV++
Sbjct  365  QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

34) H045_16950 in NC_020209


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  360 bits (1351),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 197/402 (50%), Positives = 293/402 (73%), Gaps = 1/402 (0%)

Query  5    PTRLSDLKVKAAKPKEKDYTLTDGNGLQMRLRNNGSKLWNFNYIHPVTKKRINMGLGTFP  64
            +  L+  ++++AKPK+K Y L+DG  L   +R + S+ W+F Y +P   K   +++GT+P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLAQARKRTVEARELVAQGLDPKEQRETDRQLKKAATEHTFQNVATAWFELKKDSVTT  124
            ++SLA+AR +++EAR  +A+G+DP+  +E ++    +  + TF+ VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHVFPDLGPTPISAITAPMVINLLRPLETKGSLETVKRLTQRLNEIMTY  184
               E+ WR L L  FP LG+ P+S +TAPM I  LRP+E++G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNYGLIHANPLSGIRSVFKKPKKKNMAALPPDELNELMVAIANASIKRTTRCLIEWQLH  244
            +VN G+IHANPL+GIR VFKK K  +M AL P+E+++L+ ++A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAEAATTRWADIDFERKIWTIPAERMKKRRTHFIPLTEQALALLEAIKPYSGNRDY  304
            TM RP EA+ +RW +ID   K+W IP ERMK  R H +PLT Q+LA+LEAIKP SG+R++
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPADRNPRTHCNSQTANMALKRMGFEGRLVSHGMRSMASTILNEHGDWNPELIEVALAH  364
            +FP+ RNP+   +S+TAN AL RMGF +R  +HG+R++AST LNE+G  +P++IE ALAH
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVIEAALAH  360

Query  365  VDKDEVRSAYNRADYIERRRPMMNWWSDHILQAASGSLSVSA  406
             DK+++R AYNR+DY++ RR +M+WWS+HI +++ GS SV++
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

35) VEA_004301 in NC_013456


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  358 bits (1344),  Expect = 4e-100, Method: Compositional matrix adjust.
 Identities = 218/411 (54%), Positives = 300/411 (73%), Gaps = 0/411 (0%)

Query  4    VTTRLTDKEIKSAKPSDKEYNLFDGDGLRLRIKPNSSKHWIFNYYRPMNRKRANLSLGKY  63
            ++  LT ++I++AKP DK Y L DG+ L + ++P++S+ W F Y RP + K + LS+G Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PDLSLANARKIALEASELLAQGIDPQDEKKRKQDEHNAIHQHTFLNVSKEWFELKKDEVT  123
            PD+SLA+AR  ALEA   LA+GIDPQ  K  ++    + ++ TF  V+ +W   K +++ 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  PDYAVDIWRSLELHilpsisnlpissinAPQIIELLKPIEAKGSLETVKRLSQRLNEIMN  183
                 + WR LEL  +P ++++P+S + AP  I  L+PIE++G LETVKR +Q +NEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  FATNCGLVPANPLTGIRAAFKKPKKENMAALKPAELPELMGAIANASIKRTTRCLIEWQL  243
            +A N G++ ANPL+GIR  FKK K  +M AL+P E+ +L+ ++A A+I++ TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  HTMTRPSEASGARWDEINWDEKIWTIPAERMKKRREHRIPLTEQMLELLEVIKPISGHRE  303
            HTM RP+EASGARW+EI+  +K+W IP ERMK  REH +PLT Q L +LE IKPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  FIFPSDRDPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDRDLIEAALAH  363
            FIFPS R+PK P +S+TAN AL RMGF +R  +HGLR+LASTTLNEQGF+ D+IEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  VDDNQVRSAYNRTDYLERRRPMMCWWSGNIEEAAKGNLSVTGTKQLKVMSG  414
             D NQ+R AYNRTDYL+ RR +M WWS +IE ++ G+ SV+GT  L ++ +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

36) Pmen_1188 in NC_009439


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  358 bits (1343),  Expect = 6e-100, Method: Compositional matrix adjust.
 Identities = 202/405 (50%), Positives = 293/405 (73%), Gaps = 0/405 (0%)

Query  5    TTRLSDLKVKAAKPKEKDYTLTDGNGLQMRVRINGSRLWNFNYIHPITKKRLNMGLGTFP  64
            +  L+  ++++AKPK+K Y L+DG  L   VR + SR W+F Y +P   K   +++GT+P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLAQARKLTIEARELVAQGIDPKErrdadrqakkaaTEHTLQNVATSWYELKKDAVTP  124
            ++SLA+AR  ++EAR  +A+GIDP+  ++ ++    +  + T++ VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHVFPDLGVTPIASITAPKVISLLKPLETKGSLETVKRLTQRLNEIMTY  184
               E+ WR L L  FP LG  P++ +TAP  I+ L+P+E++G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGLIPANPLTGIGSVFKKPKKKNMPALHPDELKELMVAIANASIKRTTRCLIEWQLH  244
            +VNSG+I ANPL+GI  VFKK K  +M AL+P+E+ +L+ ++A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPVEAATTRWADIDFEKRIWTIPAERMKKRRPHTVPLTDQALAILEAIKPYSGHREY  304
            TM RP EA+ +RW +ID  +++W IP ERMK  R H VPLT Q+LAILEAIKP SGHRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPADRNPRTHCNSQTANMALKRMGFEGRLVSHGMRSMASTTLNEHGWEPELIEVALAHV  364
            +FP+ RNP+   +S+TAN AL RMGF +R  +HG+R++ASTTLNE+G EP++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRADYIDRRRPMMAWWSEHIQKAATGNLSAAAINQL  409
            DK+++R AYNR+DY+D RR +M+WWSEHI+K++ G+ S A+   L
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYL  406

37) AMBAS45_06325 in NC_018679


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  356 bits (1337),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 210/404 (52%), Positives = 290/404 (72%), Gaps = 0/404 (0%)

Query  4    ITKPLTNTEVQQAKPTDKEYILSDGEGLRLRVKPNGSKLWIFNYIKPATKKRANISFGVY  63
            +++ LT  ++Q AKP DK Y LSDG  L + V+P+ S+ W F Y +P+  K + +SFG Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PDLSLKEARIKRKEAREMLALDIDPAIHRAetknkekeehentLIHVAEQWFRVKKISIS  123
            PD+SL EAR K  EAR  LA +IDP + + E K K   E++ T+  VAEQW   K   I 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  ADYAQDIWRSLEKHIFPEIGKAPISRLRAPMVINVIRPIEAKGSLETVKRIIQRLNEIMI  183
                ++ WR LE   FP +G  P+S+L APM I  +RPIE++G LETVKR  Q +NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  FAVNSGTIDSNPLAGIGKVFQAPQKQNMPSIPPSELPVFISKVANASIKLTTRCLIEWQL  243
            +AVNSG I++NPLAGI  VF+  +  +M ++ P E+  +I  VA A+I+  TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  HTMVRPGEAAGTRWDEINFDSEIWSIPAGRMKKKRPHVVPLTKQALKLLEVMRPISGHRE  303
            HTMVRP EA+G+RW+EI+  + +W IP  RMK +R HVVPLT Q+L +LE ++PISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  YVFPSDRNPKTHANPYSANVALKRMGFHKKLVAHGLRSIASTALNEHGFDPDIIESALAH  363
            ++FPS RNPK  +++ +AN AL RMGF  +  AHGLR++AST+LNE+GF+PD+IE+ALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  VDRNQVRAAYNRTDYLERRKKMMAWWSSHIEEAGKGNLTLGGSS  407
             D+NQ+R AYNRTDYL+ R+K+M+WWS HIE ++ G+ +++G++
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

38) Shew_1267 in NC_009092


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  354 bits (1328),  Expect = 9e-99, Method: Compositional matrix adjust.
 Identities = 207/401 (52%), Positives = 287/401 (72%), Gaps = 0/401 (0%)

Query  4    ITTPLTNTQIKNQKPGPKDIVLSDGGGLQLRVRTNGSKLWNYNYYHPVTKKRVNIGIGPY  63
            ++  LT  QI+  KP  K   LSDGG L + VR + S+ W++ Y +P   K   +++G Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PDIPLAKAREIALEYRQLVACGVDPKSKREQESLKLKQEVLYTLKNVAAEWLEIKKSEVT  123
            PD++LA ARE ALE R+ +A G+DP+  +E++  K   E   T+K VA +W   K +++ 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  KSHAAKTWSSLESHVFPELGDTPLNKITAPLVIKVFRPIEAKGSLETIKRLSQRLNEIMN  183
                   W  LE   FP LG  P++K+TAP+ I  +RPIE++G LET+KR +Q +NEIMN
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  FGVNCGYIDSNPLVGIRAAFKKPKKESMATLTPSELPLLMRHLSQASIKRVTRCLIEWQL  243
            ++VN G I++NPL GIR  FKK K   M +L P E+  L+R ++ A+I++VTR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  HTMTRPSEAATARWDELDLDNLTWTIPAEKMKRRREHVIPLTQQMLGILDAIKPISGHRD  303
            HTM RP+EA+ ARW+E+D+ N  W IP E+MK  REHV+PLT Q L+IL+AIKPISGHR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  YIFPADRDPKSHCNTQTANVALKRMGLKGKLVSHGMRALASTTLNEQGFESDLIEAALSH  363
            +IFP+ R+PK   +++TAN AL RMG+K++  +HG+RALASTTLNEQGFE+D+IEAAL+H
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  VDANQVRAAYNRSDFLERRRPMMSWWSKHIEEASQGNLSVS  404
             D NQ+R AYNR+D+L+ RR +MSWWS HIE +S G+ SV+
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVA  401

39) PSF113_0837 in NC_016830


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  353 bits (1325),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 203/403 (51%), Positives = 295/403 (74%), Gaps = 0/403 (0%)

Query  5    ATRLSDRQLKAVKATGKDFVLSDGDGLQLRVRASGSMMWNFNYREPLTRSRLNMALGPYP  64
            A  L+ RQ+++ K+ +K + LSDG+ L + VR+S S  W+F Y+ P       +++G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DLSLANARKKAVEARELLAQGIDPKAQRDEQRQARLAETEHTFEKIATAWFELKKDSVTP  124
            D+SLA+AR KA+EAR  LA+GIDP+  ++EQ+   ++E + TF  +A  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHVFPSMKSTPLSEVSAPMVIKLLRPIEAKGSLETVKRLSQRLNEIMTY  184
               E+ WR L L  FP + S P+S ++APM I  LRPIE++G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGLIFANPLSGIRAVFKKPRKENMAALRPDELPELMMEIANASIKRVTRCLIEWQLH  244
            +VNSG+I ANPL+GIR VFKK +  +M AL+P+E+ +L+  +A A+I++VTR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPVEAATTRWADIDFDKRIWTIPPERMKKRRPHTIPlteqalalletlKPHSGHREY  304
            TM RP EA+ +RW +ID  +++W IP ERMK  R H +PLT Q+LA+LE++KP SGHRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPADRNPRTHANSQTANMALKRMGFQDRLVSHGMRSMASTILNEHGWDPELIEVALAHI  364
            +FP+ RNP+  ++S+TAN AL RMGF+DR  +HG+R++AST LNE+G +P++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRADYIERRRPMMVWWSEHIQKAATGNLSASAIN  407
            DK+++R AYNR+DY++ RR +M WWSEHI+K++ G+ S ++  
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

40) CPS_2917 in NC_003910


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  351 bits (1317),  Expect = 6e-98, Method: Compositional matrix adjust.
 Identities = 205/401 (52%), Positives = 289/401 (73%), Gaps = 0/401 (0%)

Query  5    VKPLTNTEVKQAKPKDKIYKLSDGDGLQLRIMPNGSKQWLLDYFKPYTKKRTSFSLGSYP  64
             + LT  +++ AKPKDK+Y+LSDG+ L + + P+ S+ W + Y +P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVTLANARAKRASSRELLAQDIDPKEHKEDHHREQLLIASHTLKSVAEDWFAIKKTTITE  124
            D++LA+AR K   +R  LA++IDP+  KE++    +   + T+K VAE+W A K   I E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  VTAKSLWRKFENHVFPKLGHRPIDKILAPEAIEALKPLAAKGNLETTGKIIGHLNNIMTH  184
             T  + WRK+E   FPKLG  P+ K+ AP AI AL+P+ ++G LET  +    +N+IM  
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGILHHNPLSGIRSAFSAPKVTNMPTIKPNELGKLMKVISYASIKLVTRCLIEWQLH  244
            AVN+G++H NPL+GIR  F   KV +M +++P+E+  L++ ++ A+I+ VTR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPSESAKAEWSEIDLENRLWVIPAERMKMRLEHKVPLTKQSIEILERLKPITGHRTH  304
            TM RP+E++ A W EID+ N+LW+IP ERMKM  EH VPLT Q++ ILE +KPI+GHR  
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  LFPSHINHHKHCNVETANKALIRMGYKNRLVAHGLRALASTTLNEQEFNADVIESALSHV  364
            +FPS  N     + ETANKAL RMG+K+R  AHGLRALASTTLNEQ F++DVIE+AL+H 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRAEYLDSRRELMCWWSEHIEQAVSGNLPVST  405
            DKN++R+AYNR++YLDSRR LM WWSEHIE++  G+ +V+ 
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

41) intA in NC_018220


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  349 bits (1310),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 199/393 (51%), Positives = 287/393 (74%), Gaps = 0/393 (0%)

Query  8    LSDRQLKGVKPASKDYVLTDGDGLQLRVRSNGSLLWNFNYREPVTKKRINIGFGTYPELS  67
            L+ RQ++  KP  K Y L+DG+ L + VR++ S  W+F Y+ P   K   ++FGTYP++S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LANARKKAVDARELLAQGIDPKVQRNTLNEAKRAETEHTFENVATAWFELKKDSVTPAYA  127
            LA+AR KA++AR  LA+GIDP++ ++  +    +E + TF  VA  W   K + +     
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  EDIWRSLTLHVFPDLKTTPLTKITAPMVIAMLRPIEAKGSLETVKRLSQRLNEIMTYGVN  187
            E+ WR L L  FP L + P++K+TAPM IA LRPIE++G LETVKR +Q +NEIM Y+VN
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  SGLIFANPLSGIRAVFKKPKKENmaalppeelpelmleIANASIKRTTRCLIEWQLHTMT  247
            SG+I ANPL+GIR VFKK K  +M AL P+E+ +L+  +A A+I++ TR LIEWQLHTM 
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV  244

Query  248  RPAEAATTRWADIDFERRVWTIPPERMKKRRPHSIPLSDHAVALLESLKTHSGHREYVFP  307
            RP EA+ +RW +ID   ++W IP ERMK  R H +PL+ +++A+LE++K  SGHRE++FP
Sbjct  245  RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP  304

Query  308  ADRNPRTHANSQTANMALKRMGFQDRLVSHGMRSMASTILNEHGWDPELIEVALAHVDKD  367
            + RNP+  ++S+TAN AL RMGF+DR  +HG+R++AST LNE+G +P++IE ALAH DK+
Sbjct  305  SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN  364

Query  368  EVRSAYNRADYIERRRPMMTWWSEYIQKAATGS  400
            ++R AYNR+DY++ RR +M+WWSE I+K++ GS
Sbjct  365  QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS  397

42) YSA_03532 in NC_017986


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  348 bits (1305),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 199/401 (50%), Positives = 292/401 (73%), Gaps = 0/401 (0%)

Query  5    TARLSDRQLKAVKPKDKDYVLTDGDGLQLRVRVNRSMQWNFNYRHPVTKNRINMALGSYP  64
            +  L+ RQ+++ KPKDK Y L+DG+ L + VR + S  W+F Y++P   +   +++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLAQARRKAVEAREVLAQGIDPKAQRNDLAQAKLAETEHTFEKVASAWFELKKDSVTP  124
            ++SLA+AR KA+EAR  LA+GIDP+  +++     ++E + TF  VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHVFPSMKSTPISEVSAPMVIKILRPIESKGSLETVKRLSQRLNEIMTY  184
               E+ WR L L  FP + S P+S ++APM I  LRPIES+G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGMIFANPLSGIRAVFKKPKKENmaalppeelpelmleIANASIKRTTRCLIEWQLH  244
            +VNSG+I ANPL+GIR VFKK K  +M AL P+E+ +L+  +A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAEAATTRWVDIDFERRVWTIPPERMKKSRPHSIPLSDQAMSLLEILKSHSGHREY  304
            TM RP EA+ +RW +ID   ++W IP ERMK +R H +PL+ Q++++LE +K+ SGHRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPADRNPRTHANSQTANMALKRMGFQDRLVSHGMRSMASTILNEHGWDPELIEVALAHV  364
            +FP+ RNP+  ++S+TAN AL RMGF+DR  +HG+R++AST LNE+G +P++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRADYIERRRPMMAWWSEYILKASTGNLSASA  405
            DK+++R AYNR+DY++ RR +M+WWSE I K+S G+ S ++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

43) Pput_4605 in NC_009512


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  348 bits (1305),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 199/401 (50%), Positives = 292/401 (73%), Gaps = 0/401 (0%)

Query  5    TARLSDRQLKAVKPKDKDYVLTDGDGLQLRVRVNRSMQWNFNYRHPVTKNRINMALGSYP  64
            +  L+ RQ+++ KPKDK Y L+DG+ L + VR + S  W+F Y++P   +   +++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLAQARRKAVEAREVLAQGIDPKAQRNDLAQAKLAETEHTFEKVASAWFELKKDSVTP  124
            ++SLA+AR KA+EAR  LA+GIDP+  +++     ++E + TF  VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHVFPSMKSTPISEVSAPMVIKILRPIESKGSLETVKRLSQRLNEIMTY  184
               E+ WR L L  FP + S P+S ++APM I  LRPIES+G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGMIFANPLSGIRAVFKKPKKENmaalppeelpelmleIANASIKRTTRCLIEWQLH  244
            +VNSG+I ANPL+GIR VFKK K  +M AL P+E+ +L+  +A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAEAATTRWVDIDFERRVWTIPPERMKKSRPHSIPLSDQAMSLLEILKSHSGHREY  304
            TM RP EA+ +RW +ID   ++W IP ERMK +R H +PL+ Q++++LE +K+ SGHRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPADRNPRTHANSQTANMALKRMGFQDRLVSHGMRSMASTILNEHGWDPELIEVALAHV  364
            +FP+ RNP+  ++S+TAN AL RMGF+DR  +HG+R++AST LNE+G +P++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRADYIERRRPMMAWWSEYILKASTGNLSASA  405
            DK+++R AYNR+DY++ RR +M+WWSE I K+S G+ S ++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

44) Shewana3_2953 in NC_008577


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  347 bits (1302),  Expect = 9e-97, Method: Compositional matrix adjust.
 Identities = 214/393 (55%), Positives = 297/393 (76%), Gaps = 0/393 (0%)

Query  4    MAKPLNDTEVRQAKPREKEYNLSDGNGLMLRVRPIGSKTWLLNYSRPTSRKRANLTLGTY  63
            MA+ L   +++ AKP++K Y LSDG  L + VRP  S++W + Y RP   K + L++GTY
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PELTladarrkaldarklIAQDIDPQEHREGQRQALAAIHEHTFENVATQWFDIKKTEIT  123
            P+++LA+AR KAL+ARK +A++IDPQ  +E Q+    + ++ TF  VA QW   K  +I 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  ENHAASTWRSFKLHVLPYIGSTPISQITAPMVIEIFRPIEAKGSLETVKRLTQRLNEVMT  183
            E+   + WR + L  +P +GS P+S++TAPM I  +RPIE++G LETVKR +Q +NE+M 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAVNTGLIHANPLSGIkaafkkpkkqkmaamapYELPELLSTLSRASIKRVTRLLIEWQL  243
            YAVN+G+IHANPL+GI+  FKK K   M A+ P E+ +L+ T++ A+I++VTR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  HTMTRPNEAAGARWDEFNFDDRLWTIPAERMKMKREHVIPLSDACMLILQELKSISGHRE  303
            HTM RPNEA+GARW+E++  ++LW IP ERMKM+REHV+PL+   + IL+ +K+ISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  YLFPADRNPKTHSNVQTANAALKRMGLQDRTTAHGLRALASTTLNEQGFDWDVVEAALAH  363
            ++FP+ RNPK  ++ +TAN AL RMG++DRTTAHGLRALASTTLNEQGF+ DV+EAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  TDKNQVRSAYNRATYLERRREMMEWWSKSIKSA  396
            TDKNQ+R AYNR+ YL+ RR +M WWS  I  +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

45) O3Y_02430 in NC_016944


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  346 bits (1300),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 203/398 (52%), Positives = 286/398 (72%), Gaps = 2/398 (0%)

Query  8    LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGSFPDVS  67
            LT  Q++ AK  DK Y LSDG+ L + V+ + ++ W ++Y +P   K   +SFG++PD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKF-SDRWLALKKESVKPET  126
            LAEAR +  EA+  LA  IDP+  K+EQ  K  +E + TF KF +++W A K   +K  T
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATF-KFVAEQWKATKEGQIKEKT  123

Query  127  ADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAV  186
             +   R LE   +PKLG++P+  + +   ++ L P+ +QG LETVKR  +++NE+M  AV
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  187  ASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIAGANITLSTRCLLEWQLHTM  246
             SG I+ N LA+I  +F   K  HM +++P+ + +L++++A ANI   TR L+EWQLHTM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  247  TRPIESATARWQDIDFENKVWVVPEERMKMKRPHTIPLTEQTLALLEIMKPISGHREFIF  306
             RP E++ ARW++ID  NK+W++P ERMKM+R H +PLT QTLA+LE +KPISGHREFIF
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  307  PSNKNPKSHVNSQSANMALKRMGFEGQLVSHGLRALASTTLNEQGFNPDVIEAALAHVDK  366
            PS++NPK   +S++AN AL RMGF ++  +HGLRALASTTLNEQGF+PDVIEAALAH DK
Sbjct  304  PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK  363

Query  367  NEVRKAYNRAEYLEQRRKLMCWWSDHITASAEGNVSLV  404
            N++RKAYNR++YL+ RRKLM WWS+HI  S+ G+ S+ 
Sbjct  364  NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVA  401

46) PputUW4_00675 in NC_019670


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  346 bits (1301),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 199/406 (50%), Positives = 292/406 (72%), Gaps = 0/406 (0%)

Query  5    TARLSDRQLKAVKPKDKDYVLTDGDGLQLRVRVNRSMQWNFNYRHPVTKNRINMALGSYP  64
            +  L+ RQ+++ KPKDK Y L+DG+ L + VR + S  W+F Y++P   +   +++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLAQARRKAVEAREILAQGIDPKAQRNELAQAKRVETELTFEKVATAWFELKKDSVTP  124
            ++SLA+AR KA+EAR  LA+GIDP+  ++E       E + TF  VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHVFPNMKSTPISEVSAPMVIKLLRPIEAKGSLETVKRLCQRLNEIMTY  184
               E+ WR L L  FP++ S P+S ++APM I  LRPIE++G LETVKR  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGMIFANPLSGIRAVFKKPKKENmaalppeelpelmleIANASIKRTTRCLIEWQLH  244
            +VNSG+I ANPL+GIR VFKK K  +M AL P+E+ +L+  +A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAEAATTRWADIDFERRVWTIPPERMKKRRPHSIPLSNQTMALLEVLRSHSGHREY  304
            TM RP EA+ +RW +ID   ++W IP ERMK  R H +PL+ QT+A+LE +++ SGHRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPADRNPRTHANSQTANMALKRMGFQDRLVSHGMRSMASTILNEHGWDPELIEVALAHV  364
            +FP+ RNP+  ++S+TAN AL RMGF+DR  +HG+R++AST LNE+G +P++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRADYIERRRPMMAWWSEYIQRASAGNLSASAINVIR  410
            DK+++R AYNR+DY++ RR +M+WWSE I+++S G+ S ++   ++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLH  407

47) VV0560 in NC_005139


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  346 bits (1299),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 203/398 (52%), Positives = 286/398 (72%), Gaps = 2/398 (0%)

Query  8    LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGSFPDVS  67
            LT  Q++ AK  DK Y LSDG+ L + V+ + ++ W ++Y +P   K   +SFG++PD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKF-SDRWLALKRESVKPET  126
            LAEAR +  EA+  LA  IDP+  K+EQ  K  +E + TF KF +++W A K   +K  T
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATF-KFVAEQWKATKEGQIKEKT  123

Query  127  ADKAYRALEKHILPKLGDVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAV  186
             +   R LE   +PKLG +P+  + +   ++ L P+ +QG LETVKR  +++NE+M  AV
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  187  ASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIAGANITLSTRCLLEWQLHTM  246
             SG I+ N LA+I  +F   K  HM +++P+ + +L++++A ANI   TR L+EWQLHTM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  247  TRPIESATARWQDIDFENKVWVVPEERMKMKRPHTIPLTDQTLALLEIMKPISGHREFIF  306
             RP E++ ARW++ID  NK+W++P ERMKM+R H +PLT QTLA+LE +KPISGHREFIF
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  307  PSNKDPKSHVNSQSANMALKRMGFEGQLVSHGLRALASTTLNEQGFNPDVIEAALAHVDK  366
            PS+++PK   +S++AN AL RMGF ++  +HGLRALASTTLNEQGF+PDVIEAALAH DK
Sbjct  304  PSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDK  363

Query  367  NEVRKAYNRAEYLEQRRKLMCWWSDHITASAEGNVSLA  404
            N++RKAYNR++YL+ RRKLM WWS+HI  S+ G+ S+A
Sbjct  364  NQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVA  401

48) Sde_2743 in NC_007912


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  345 bits (1295),  Expect = 3e-96, Method: Compositional matrix adjust.
 Identities = 202/407 (50%), Positives = 286/407 (71%), Gaps = 0/407 (0%)

Query  5    TTPLTATQVSNAKPKEKVYSLSDGGGLQLVVKPIGSKLWQFDYYHPATKKRARLSFGPYP  64
            +  LTA Q+  AKPK+K+Y LSDGG L + V+P  S+ WQF Y +P+  K + LSFG YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLAIARKQREECRKLVLQGTDPKAHRDNERLQERLAHTDTLKASAKAWFEIKKTTITP  124
            ++SLA AR +  E RK + +G DP+  +++++ +    +  T+K  A  W   K   I  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  NYADDIWRSLERHIFPKLGSAPVSKLTAPQIIEVLTPIAAKGSLETVKRLCQRLNEILIW  184
            +  ++ WR LE   FPKLGS PVSKLTAP  I  L PI ++G LETVKR  Q +NEI+  
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGKLPSNPISGIRYNFQAPQKKNMPALRPEELPELMRALNTASIKLTTRCLIEWQLH  244
            AVN+G + +NP++GIR  F+  +  +M AL+P+E+ +L+R++ TA+I+  TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLTRPSEAAGAEWSEIDEVHKIWRIPAIRMKKRRDHAVPLTPSMLNLLNIMRPISGDSEY  304
            T+ RP+EA+GA W EID V+K+W IP  RMK  R+H VPLT+  L +L+ ++PISG+ E+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPADRSPRKHTNEQTANMALKRMGFKDRLVAHGLRSIGSTALNEQGFESDLIEAALAHV  364
            IFP+ R+P+  T+ +TAN AL RMGFKDR  AHGLR+++ST+LNEQGFE+D+IEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDDVRAAYNRAEYIERRRPMMEWWSTLIISASSGGTSLANVTNMTL  411
            DK+++R AYNR++Y++ RR +M WWS  I  +S G+ S+A    + L
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHL  408

49) intA in NC_014500


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  345 bits (1294),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 196/397 (50%), Positives = 291/397 (74%), Gaps = 1/397 (0%)

Query  4    ITTPLTNTEIKAAKPAEKEYTLQDGDGLYLLVKPSGSKIWRFNYYRPDTKKRALISFGAF  63
            ++  LT  +I++AKP +K Y L DG+ LY+ V+PS S+ W+F Y RP+  K + +SFG++
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PAVSLAEARQRRESAKALISKGIDPQFHqqqqreqeqAISLNTFAKVAADWYEVKKSQQL  123
            P +SLAEAR++   A+  ++ GIDPQ+ +++Q+ +  +    TF  VA +W    K  Q+
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW-KATKEGQI  119

Query  124  AANTIKDIWRSLEKYVFPFIANQPISQLTARHFITALEPIQASGKLETVKRVSQRINEVM  183
              +T+ + WR LE Y FP +++ P+S+LTA   I+AL PI++ G LETVKR +Q +NE+M
Sbjct  120  KEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  184  DYAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPGLMKTLSVASIELQTRLLIEWQ  243
            +YAVNSG+I ANP A IR  F+     HM +++P+ + +L++T++ A+I+  TR+LIEWQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  244  LLTVSRPAEAAETRWSEIDLMQNTWTIPAGRMKMRREHVIPLPPQALAILDAMKPISGHR  303
            L T+ RP EA+ +RW EID++++ W IP  RMKM REHV+PL +Q+LAIL+A+KPISGHR
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  304  EYLFPSAKDPKQPMNSQTANAALRRMGYKGVLVSHGLRAIFSTAANEAGFPPDVIEAALA  363
            E++FPS+++PK P +S+TAN AL RMG+K+   +HGLRA+ ST+ NE GF PDVIEAALA
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  364  HVDTNEVRRAYNRSTYLEQRKVLMCWWGEFVETAATG  400
            H D N++R+AYNR+ YL+ R+ LM WW+E +E ++ G
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

50) GNIT_1611 in NC_016041


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  343 bits (1287),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 200/409 (49%), Positives = 295/409 (73%), Gaps = 8/409 (1%)

Query  4    VATPLTDSKIQSAKPREKDYKLSDGRGLHLRVRAGGTKDWIFRYQVPFSGTRKDMSFGIY  63
            +A  LT  +IQ+AKP++K Y+LSDG  L + VR++ ++ W FRY+ P  +    +SFG Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PTVGLADAREKRKNAHKLLSKDIDPKSHKAEVKRTATQDKANSFTCITLDWLRVKSTKVT  123
            P ++LA+AREK  +A+K L+ +IDP+  K E K  +  ++  +F  ++ +W   K  ++ 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  AKYAVQIEASLRN---HVFPHIGKRPVKELTPSEVIEFLRPIEAKGSKETIKRLCQRINE  180
             K    +E++ R+     FP +G  PV  LT++  I  LRPIE++G  ET+KR  Q +NE
Sbjct  121  EK---TLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNE  177

Query  181  VMDYAVNTGLIDINPLSKIHKAFLSPNPKHLPTIKPEELPQLMQSLSTASIKLVTRTLIE  240
            +M+YAVN+G+I+ NPL+ I+  F   +  H+ +++P+E+ +L+++++TA+I+ VTR LIE
Sbjct  178  IMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIE  237

Query  241  WQLHTMVRPSEAATAKWSEIDLDNQTWTIPADKMKKKNNGDHVVPLTPQTLALLDFIKPI  300
            WQLHTMVRP+EA+ A+W EID+ N+ W IP ++MK +   +HVVPLT+QTLA+L+ IKPI
Sbjct  238  WQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNR--EHVVPLTAQTLAILEAIKPI  295

Query  301  SGHREFIFPADRNPKTHTNTQTANMALKRMGYHKTLVAHGLRSLASTTLNERAFAPDVIE  360
            SGHREFIFP+ RNPK  T+++TAN AL RMG+     AHGLR+LASTTLNE++F PDVIE
Sbjct  296  SGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIE  355

Query  361  ACLAHIDSNSVRRAYNRTDYLERRRKVMNWWSAHVEQAATGNMSLANTN  409
            A LAH D N +R+AYNRTDYL+ RRK+M+WWS H+E+++ G+ S+A T 
Sbjct  356  AALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

51) VCD_001089 in NC_012668


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  342 bits (1285),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 201/404 (50%), Positives = 286/404 (71%), Gaps = 0/404 (0%)

Query  8    LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS  67
            LT  Q++ AK  DK Y LSDG+ L + V+ + ++ W ++Y +P   K   +SFG +PD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA  127
            LAEAR +  EA+  LA  IDP+  K+EQ  K  +E + TF   +++W + K   +K  T 
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA  187
            +   R LE   +PKLG++P+  + +   ++ L P+ +QG LETVKR  +++NE+M  AV 
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHTMT  247
            SG I+ N LA+I  +F   K  HM +++P+ + +L++++A ANI   TR L+EWQLHTM 
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV  244

Query  248  RPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISSHREYIFP  307
            RP E++ ARW++ID  NK+W+IP ERMKM+R H +PLT QTLA+LE +KPIS+HRE+IFP
Sbjct  245  RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP  304

Query  308  SNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAALAHVDKN  367
            S++NPK   +S++AN AL RMG+K++  +HGLRALASTTLNEQGF+PD+IEAALAH DKN
Sbjct  305  SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN  364

Query  368  EVRKAYNRAEYLEQRRKLMSWWSSHITSASNCNTSLAERKVLKL  411
            ++RKAYNR++YL+ RRKLMSWWS HI  +S  + S+A    L L
Sbjct  365  QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHL  408

52) Vch1786_I2820 in NC_016445


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  342 bits (1285),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 201/404 (50%), Positives = 286/404 (71%), Gaps = 0/404 (0%)

Query  8    LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS  67
            LT  Q++ AK  DK Y LSDG+ L + V+ + ++ W ++Y +P   K   +SFG +PD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA  127
            LAEAR +  EA+  LA  IDP+  K+EQ  K  +E + TF   +++W + K   +K  T 
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA  187
            +   R LE   +PKLG++P+  + +   ++ L P+ +QG LETVKR  +++NE+M  AV 
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHTMT  247
            SG I+ N LA+I  +F   K  HM +++P+ + +L++++A ANI   TR L+EWQLHTM 
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV  244

Query  248  RPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISSHREYIFP  307
            RP E++ ARW++ID  NK+W+IP ERMKM+R H +PLT QTLA+LE +KPIS+HRE+IFP
Sbjct  245  RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP  304

Query  308  SNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAALAHVDKN  367
            S++NPK   +S++AN AL RMG+K++  +HGLRALASTTLNEQGF+PD+IEAALAH DKN
Sbjct  305  SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN  364

Query  368  EVRKAYNRAEYLEQRRKLMSWWSSHITSASNCNTSLAERKVLKL  411
            ++RKAYNR++YL+ RRKLMSWWS HI  +S  + S+A    L L
Sbjct  365  QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHL  408

53) VC0516 in NC_002505


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  342 bits (1285),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 201/404 (50%), Positives = 286/404 (71%), Gaps = 0/404 (0%)

Query  8    LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS  67
            LT  Q++ AK  DK Y LSDG+ L + V+ + ++ W ++Y +P   K   +SFG +PD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA  127
            LAEAR +  EA+  LA  IDP+  K+EQ  K  +E + TF   +++W + K   +K  T 
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA  187
            +   R LE   +PKLG++P+  + +   ++ L P+ +QG LETVKR  +++NE+M  AV 
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHTMT  247
            SG I+ N LA+I  +F   K  HM +++P+ + +L++++A ANI   TR L+EWQLHTM 
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV  244

Query  248  RPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISSHREYIFP  307
            RP E++ ARW++ID  NK+W+IP ERMKM+R H +PLT QTLA+LE +KPIS+HRE+IFP
Sbjct  245  RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP  304

Query  308  SNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAALAHVDKN  367
            S++NPK   +S++AN AL RMG+K++  +HGLRALASTTLNEQGF+PD+IEAALAH DKN
Sbjct  305  SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN  364

Query  368  EVRKAYNRAEYLEQRRKLMSWWSSHITSASNCNTSLAERKVLKL  411
            ++RKAYNR++YL+ RRKLMSWWS HI  +S  + S+A    L L
Sbjct  365  QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHL  408

54) Dd586_2389 in NC_013592


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  341 bits (1282),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 195/397 (50%), Positives = 293/397 (74%), Gaps = 1/397 (0%)

Query  4    ITTPLTNTEIKAAKPAEKEYTLQDGDGLYLLVKPSGSKIWRFNYYRPDTKKRALISFGAF  63
            ++  LT  +I++AKP +K Y L DG+ LY+ V+PS S+ W+F Y RP+  K + +SFG++
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PAVSLAEARQRRESAKALISKGIDPqfhqqqqreqeqainqNTFAKVAADWYEVKKSQPL  123
            P +SLAEAR++   A+  ++ GIDPQ+ +++Q+ +  + ++ TF  VA +W   K +Q +
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-I  119

Query  124  AANTIKDIWRSLEKYVFPFIANQPISQLTARHFITALEPIQASGKLETVKRVSQRINEVM  183
              +T+ + WR LE Y FP +++ P+S+LTA   I+AL PI++ G LETVKR +Q +NE+M
Sbjct  120  KEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  184  DYAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPGLMKTLSVASIELQTRLLIEWQ  243
            +YAVNSG+I ANP A IR  F+     HM +++P+ + +L++T++ A+I+  TR+LIEWQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  244  LLTVARPAEAAETRWSELDLTENTWTIPAGRMKMRREHVIPLPSQALAILDAMKPISGHR  303
            L T+ RP EA+ +RW E+D+ ++ W IP  RMKM REHV+PL +Q+LAIL+A+KPISGHR
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  304  EYLFPSAKDPKQPMNSQTANAALRRMGYKGVLVSHGLRAIFSTAANEAGFPPDVIEAALA  363
            E++FPS+++PK P +S+TAN AL RMG+K+   +HGLRA+ ST+ NE GF PDVIEAALA
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  364  HVDTNEVRRAYNRSTYLEQRKVLMCWWGEFVETAATG  400
            H D N++R+AYNR+ YL+ R+ LM WW+E +E ++ G
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

55) PCC21_016360 in NC_018525


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  341 bits (1281),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 193/396 (49%), Positives = 291/396 (74%), Gaps = 1/396 (0%)

Query  5    AKPLTNTEVKAAKAIDKELSLHDGGGLLLFVKPSGTKTWRFRYYHPQTKKRTTLTFGSYP  64
            A+ LT  ++++AK+ DK   L DGG L + V+PS +++W+FRY +P   K T L+FG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AISLADARQMREAAKALLEKSIDPQFHqqqqreqeqAINLNTFAKVSADWYEVKKSQPLA  124
             +SLA+AR+    A+  L  +IDPQ+ +++Q+ +  + +  TF  V+ +W   K +Q + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-IK  120

Query  125  ENTIKDIWRSLEKYVFPFIGTLPITQLTARHFITALEPIQASGKLETVKRVIQRINEVMD  184
            E+T+ + WR LE Y FP +G++P+++LTA   I+AL PI++ G LETVKR  Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPGLMKTLSVASIELQTRLLIEWQL  244
            YAVNSG+I ANP A IR  F+     HM +++P+ + +L++T++ A+I+  TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTVTRPAEAAETRWSEINLADNTWTIPAGRMKMRRDHIIPLPPQALAILDAMKPISGHRE  304
             T+ RP EA+ +RW EI++ ++ W IP  RMKM R+H++PL +Q+LAIL+A+KPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YLFPSSKDPKQPMNSQTANAALRRMGYKGVLVSHGLRAIFSTAANEEGFPPDVIEAALAH  364
            ++FPSS++PK P +S+TAN AL RMG+K+   +HGLRA+ ST+ NE+GF PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSTYLEQRKILMCWWGEFVETAATG  400
             D N++R+AYNR+ YL+ R+ LM WW+E +E ++ G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

56) Pecwa_1902 in NC_013421


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  341 bits (1280),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 192/396 (49%), Positives = 292/396 (74%), Gaps = 1/396 (0%)

Query  5    TKRLTNTEVKAAKAIDKELSLHDGGGLLLFVKPSGTKTWRFRYYQPQTKKRTTLTFGSYP  64
            ++ LT  ++++AK+ DK   L DGG L + V+PS +++W+FRY +P   K T L+FG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AISLADARQMREAAKALLEKSIDPQFHqqqqreqeqAINLNTFAKVSADWYELKKSQPLA  124
             +SLA+AR+    A+  L  +IDPQ+ +++Q+ +  + +  TF  V+ +W   K +Q + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-IK  120

Query  125  ENTIKDIWRSLEKYVFPFIGTLPITQLTARHFITALEPIQASGKLETVKRVSQRINEVMD  184
            E+T+ + WR LE Y FP +G++P+++LTA   I+AL PI++ G LETVKR +Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPGLMKTLSVASIELQTRLLIEWQL  244
            YAVNSG+I ANP A IR  F+     HM +++P+ + +L++T++ A+I+  TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTVTRPAEAAETRWSEINLTDNTWTIPAGRMKMRRDHIIPLPPQALAILDAMKPISGHRE  304
             T+ RP EA+ +RW EI++ ++ W IP  RMKM R+H++PL +Q+LAIL+A+KPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YLFPSSKDPKQPMNSQTANAALRRMGYKGVLVSHGLRAIFSTAANEEGFSPDVIEAALAH  364
            ++FPSS++PK P +S+TAN AL RMG+K+   +HGLRA+ ST+ NE+GF PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSTYLEQRKVLMCWWGEFVETAATG  400
             D N++R+AYNR+ YL+ R+ LM WW+E +E ++ G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

57) VS_1669 in NC_011753


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  340 bits (1276),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 198/393 (51%), Positives = 281/393 (72%), Gaps = 0/393 (0%)

Query  5    VQPLTATQIKQAKPKEKEYNLGDGDGLSLKIKPIGTKLWRFSYYHPISRKRLNLALGKYP  64
             + LTA QI+ AKPK+K Y L+DG+ L + ++P  ++ W+F Y +P   K   L++G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSLAKARTKAIEARELLADGIDPKEHRDATLREKQLELANTLQSVFDDWIEVKRTSVKE  124
            D+SLA AR KA+EAR  LADGIDP+  ++        E   T++ V ++W   K   +KE
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  QTAKKLKQRIEKYLLPDLGKFPLSDITAPQAIKTIKPIANQGKLETVGRLCRNLNEIMTF  184
            +T     +++E Y +P LG +P+S +TAP AI +++PI +QG LETV R  + +NEIM +
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGVIEHNKLAGIGKAFETAKVTNQASLAPDELPELLKTINYASIKPITRCLLEWQLH  244
            AVN+GVI+ N LAGI   F   KV +  +L P+E+ +L++T+  A+I+ +TR L+EWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAETAGARWDEIDREKMLWVIPAERMKKGRVHTVPLTKQTLDLLETIDFITGDSEY  304
            TM RP E++GARW+EID  + LW+IP ERMK  R H VPLT QTL +LE+I  I+G+ E+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  LFPADKSNKNHINKETANKALVRMGMKGRQTSHGLRALASTTLNEQNFDPDIIEAALSHV  364
            +FP+ ++ K   + ETANKAL RMG K+R T+HGLRALASTTLNEQ F+PD+IEAAL+H 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DRDKVRSAYNRTDYLERRKVLMAWWSDHIEEAA  397
            D++++R AYNRTDYL+ R+ LM+WWS+HIE ++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSS  394

58) intA in NC_004547


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  339 bits (1273),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 192/396 (49%), Positives = 292/396 (74%), Gaps = 1/396 (0%)

Query  5    TKRLTNTEVKAAKAIDKELSLHDGGGLLLFVKPSGTKTWRFRYYQPQTKKRTTLTFGSYP  64
            ++ LT  ++++AK+ DK   L DGG L + V+PS +++W+FRY +P   K T L+FG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AISLADARQMREAAKALLEKSIDPQFHqqqqreqeqAINLNTFAKVSADWYELKKSQPLA  124
             +SLA+AR+    A+  L  +IDPQ+ +++Q+ +  + +  TF  V+ +W   K +Q + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-IK  120

Query  125  ENTIKDIWRSLEKYVFPFIGTLPITQLTARHFISALEPIQASGKLETVKRVSQRINEVMD  184
            E+T+ + WR LE Y FP +G++P+++LTA   I+AL PI++ G LETVKR +Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPGLMKTLSVASIELQTRLLIEWQL  244
            YAVNSG+I ANP A IR  F+     HM +++P+ + +L++T++ A+I+  TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTVTRPAEAAETRWSEINLKDNTWTIPAGRMKMRRDHIIPLPPQALAILDAMKPISGHRE  304
             T+ RP EA+ +RW EI++ ++ W IP  RMKM R+H++PL +Q+LAIL+A+KPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YLFPSSKDPKQPMNSQTANAALRRMGYKGVLVSHGLRAIFSTAANEEGFPPDVIEAALAH  364
            ++FPSS++PK P +S+TAN AL RMG+K+   +HGLRA+ ST+ NE+GF PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSTYLEQRKVLMCWWGEFVETAATG  400
             D N++R+AYNR+ YL+ R+ LM WW+E +E ++ G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

59) Ping_2463 in NC_008709


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  336 bits (1262),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 211/402 (53%), Positives = 287/402 (72%), Gaps = 1/402 (0%)

Query  5    VKPLTATQVLQAKPKDKVYNLGDGDGLSLKILPLGSKLWRFSYYRPVSRKRAHLALGIYP  64
             + LTA Q+  AKPKDK+Y L+DG+ L + + P  S+ W+F Y RP   K + L++G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVSLAKARTKAIEARKLLADGIDPKEQRDTTLKAQQIELSNTLQAVFEDWFAVKKTSIKE  124
             +SLA AR KA+EARK LADGIDP+  ++        E + T++ V E+W A K   IKE
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  LTAKKLKQRLDKYLLTYLGKFPIAEITAPQAIKILQPVANQGKLETVGRLCRNLNEIMTF  184
             T     ++L+ Y +  LG +P++ +TAP AI  L+P+ +QG LETV R  + +NEIM +
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGIIEHNKLAGIGKAFATAQVTNQASLKPEELPELLIALNYANIKLITRCLIEWQLH  244
            AVN+G+I+ N LAGI   F   +V +  +L+P+E+ +L+ ++  ANI+ +TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAETAGARWGEIDKENKLWHIPPERMKKGRPHTVPLTTQTLALLETIDSITGDSEY  304
            TM RP E++GARW EID  NKLW IP ERMK  R H VPLT+QTLA+LE+I +I+G+ E+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPADKTNKKHICKETANKALARMGFKGRQTSHGLRALASTTLNEQNVFDADVIEAALSH  364
            IFP+ +  K     ETANKAL+RMGFK+R T+HGLRALASTTLNEQ  F++DVIEAAL+H
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVIEAALAH  360

Query  365  VDKDKVRSAYNRTDYLERRRVLMGCWSDHIEEASKGSNSITG  406
             DK+++R AYNRTDYL+ RR LM+ WS+HIE +S GS S++G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

60) Dd703_2362 in NC_012880


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  336 bits (1262),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 195/391 (50%), Positives = 284/391 (73%), Gaps = 1/391 (0%)

Query  5    AKPLTNTEVKAAKATDKELSLHDGGGLLLFVKPSGTKTWRFRYYHPQTKKRTTLTFGSYP  64
            A+ LT  ++++AK+ DK   L DGG L + V+PS +++W+FRY +P   K T L+FG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARQMREAAKALLEKGIDPQFHqqqqreqeqAISLNTFAKVAADWYEVKKSQPLA  124
             +SLA+AR+    A+  L  GIDPQ+ +++Q+ +  +    TF  VA +W   K +Q + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-IK  120

Query  125  ANTIKDIWRSLEKYVFPFIANQPISQLTARHFITALEPIQASGKLETVKRVSQRINEVMD  184
             +T+ + WR LE Y FP +++ P+S+LTA   I+AL PI++ G LETVKR +Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPSLMKTLSVASIELQTRLLIEWQL  244
            YAVNSG+I ANP A IR  F+     HM +++P+ +  L++T++ A+I+  TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTVARPAEAAETRWSEIDLTQNTWTIPAGRMKMRREHVIPLLPQALAILDAMKPISGHRE  304
             T+ RP EA+ +RW EID+ ++ W IP  RMKM REHV+PL +Q+LAIL+A+KPISGHRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YLFPSAKDPKQPMNSQTANAALRRMGYKGVLVSHGLRAIFSTAANEAGFPPDVIEAALAH  364
            ++FPS+++PK P +S+TAN AL RMG+K+   +HGLRA+ ST+ NE GF PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSTYLEQRKVLMCWWGEFVE  395
             D N++R+AYNR+ YL+ R+ LM WW+E +E
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

61) Tola_2265 in NC_012691


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  335 bits (1258),  Expect = 3e-93, Method: Compositional matrix adjust.
 Identities = 203/412 (50%), Positives = 302/412 (74%), Gaps = 3/412 (0%)

Query  4    DKLTDSKLRTAKPEDKEYNLGDGDGLYLRIKPNGNKMWLFNYYRPDNKKRANLSFGPYPD  63
            ++LT  +++TAKP DK Y L+DG+ LY+ ++P+ ++ W F Y RP++ K + LSFG YPD
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  64   VTlaaarerrrqarallSENIDPQTYLQEQIAITKARDEASSNTFVKIARQWLDMKRHDV  123
            ++LA ARE+  +AR  L++ IDPQ   +EQ A T + ++A   TF  +A QW   K  ++
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA---TFKFVAEQWKATKEGQI  119

Query  124  SEDYAEDTWRSLEMYILPELANKTIDLIRAPMVISLLRPLEADGKLETVRRLCQRVNEIM  183
             E   E+ WR LE+Y +P L++  +  + APM I+ LRP+E++G LETV+R  Q +NEIM
Sbjct  120  KEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  184  SYAVNHGLLDANPCADIRKVFKKPSKKHMPTIRPDELPLLMADIINGRLDATTRCQIEWS  243
            +YAVN G+++ANP A+IR VFKK    HM +++P+E+  L+  +  + ++  TR  IEW 
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  244  LHTLVRPNESAGTRWDEIDLESKIWTIPAERMKMDRTHRIPLTKQAIALLERMKPISGHR  303
            LHT+VRPNE++G+RW+EID+ +K+W IP ERMKM+R H +PLT Q++A+LE +KPISGHR
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  304  PHVFPSYRNPLGHIHEQTANAALKRLGYGGRLVAHGLRSLGSTTLNEQEFNPDVIEAALS  363
              +FPS RNP    + +TAN AL R+G+ +R  AHGLR+L+STTLNEQ F+PDVIEAAL+
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  364  HADDNEIRRAYNRSDYFEQRIKMMQWWSDHIEAAAQGWFSLGGSKGLKIVNS  415
            H+D N+IR+AYNR+DY++ R K+M WWS+HIE ++ G +S++G+  L ++++
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

62) PC1_1631 in NC_012917


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  334 bits (1253),  Expect = 7e-93, Method: Compositional matrix adjust.
 Identities = 195/404 (49%), Positives = 287/404 (72%), Gaps = 1/404 (0%)

Query  5    TKPLNNTEVKSAKATDRAITLYDGDGLELQVTPSGSKLWRFRYYKPFTRKRAMISLGAYP  64
            ++ L   ++++AK+ D+   L DG+ L + V PS S+ W+FRY +P   K + +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVSLAEARKLREDARLLLSKDVDPQEHKQAEQSRQKNATENTFEKVAAEWFKTKESAGLA  124
             +SLAEAR    +AR  L+ ++DPQ  K+ ++++     + TF  VA +W K+   + + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW-KATKEGQIK  120

Query  125  THTLNDIWRSMSKYVFPHIGSMPIANITAQRFIGALEPTHASGRLETVKRLSQRINEVMD  184
              TL++ WR +  Y FP +GS+P++++TA   I+AL P ++ G LETVKR +Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YALNSGLVSVNPAARIGRTFHKPKVKHRPALLPEQLPLLMKTLSFASIGRQTRCLIEWQL  244
            YA+NSG++  NP A I   F K KV H  AL P+++  L++T++ A+I + TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTMTRPAEAAESRWDEIDFDAKEWRIPAGRMKMKREHVIPLSEQALGILEVMKPISKHRD  304
             TM RP EA+ +RW+EID   K W IP  RMKM+REHV+PL+ Q+L+ILE +KPIS HR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YVFPGYRNPLEPMNSQTANMALKRMGFKDMLVAHGMRAIASTILNEKGFPPDVIEAALAH  364
            ++FP+ RNP  P +S+TAN AL RMGFKD   AHG+RA+AST LNE+GF PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  IDTNEVRRAYNRAQYLEQRREMMAWWGEHVESASYGKTSIISVA  408
             D N++R+AYNR++YL+ RR +M+WW+EH+E +SYG  S+ + +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

63) W5S_1848 in NC_017845


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  333 bits (1251),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 195/404 (49%), Positives = 287/404 (72%), Gaps = 1/404 (0%)

Query  5    TKPLNNTEVKSAKATDRAVTLYDGDGLELQVTPSGSKLWRFRYYKPFTRKRAMISLGSYP  64
            ++ L   ++++AK+ D+   L DG+ L + V PS S+ W+FRY +P   K + +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVSLAEARKLREDARLLLSKDVDPQEHKQAEQSRQKNATENTFEKVAAEWFKTKESAGLA  124
             +SLAEAR    +AR  L+ ++DPQ  K+ ++++     + TF  VA +W K+   + + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW-KATKEGQIK  120

Query  125  THTLNDIWRSMSKYVFPHIGSMPIANITAQRFIGALEPTHAAGRLETVKRLSQRINEVMD  184
              TL++ WR +  Y FP +GS+P++++TA   I+AL P ++ G LETVKR +Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YALNSGLVSVNPAARIGRTFHKPKVKHRPALLPEQLPLLMKTLSFASIGRQTRCLIEWQL  244
            YA+NSG++  NP A I   F K KV H  AL P+++  L++T++ A+I + TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTMTRPAEAAESRWDEIDFHAKEWRIPAGRMKMKREHVIPLSEQALGILEVMKPISKHRD  304
             TM RP EA+ +RW+EID   K W IP  RMKM+REHV+PL+ Q+L+ILE +KPIS HR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YVFPGYRNPLEPMNSQTANMALKRMGFKDMLVAHGMRAIASTILNEKGFPPDVIEAALAH  364
            ++FP+ RNP  P +S+TAN AL RMGFKD   AHG+RA+AST LNE+GF PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  IDTNEVRRAYNRAQYLEQRREMMAWWGEHVESASYGKTSIISVA  408
             D N++R+AYNR++YL+ RR +M+WW+EH+E +SYG  S+ + +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

64) int5 in NC_016816


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  332 bits (1244),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 193/402 (49%), Positives = 284/402 (71%), Gaps = 1/402 (0%)

Query  5    TKPLNNTEVKNAKATERALVLYDGDGLELQVTPGGSKLWRFRYYKPYTRKRAMISFGSYP  64
            ++ L   +++ AK+ ++   L DG+ L + V P+ S+ W+FRY +P   K + +SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLSEARQNREVARSLLSKDIDPQQHKKSEQLRQKSVSESTFEKVAAEWFKTKEAAGLA  124
             ++L+EAR++   AR  L+ +IDPQ  K  ++ +  +  ++TF  VA +W K+   + + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW-KATKEGQIK  120

Query  125  THTLNDIWRSLSKYVFPHIGSMPISSITAQQFIAALEPTHAAGRLETVKRLTQRINEVMD  184
              TL++ WR L  Y FP +GS+P+S +TA   IAAL P ++ G LETVKR +Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  FALNSGLVSSNPAARISRTFHKPKVKHRPALLPEQLPFLMKTLAFASIGRQTRCLIEWQL  244
            +A+NSG++ +NP A I   F K KV H  AL P+++  L++T+A A+I + TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTMTRPAEAAMTRWDEINFETKEWRIPAGRMKMKREHVIPLSDQALGVLDVMKPISQHRD  304
             TM RP EA+ +RW+EI+   K W IP  RMKM+REHV+PL+ Q+L++L+ +KPIS HR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  FVFPGYRNPLEPMNSQTANMALKRMGFKDLLVAHGMRSIASTILNEKGFPPDVIEAALAH  364
            F+FP+ RNP  P +S+TAN AL RMGFKD   AHG+R++AST LNE+GF PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  IDTNEVRRAYNRAQYLEQRREMMTWWGEHVEEKSYGIMCVQS  406
             D N++R+AYNR++YL+ RR +M+WW+EH+E  SYG   V +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

65) SPAB_03412 in NC_010102


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  331 bits (1241),  Expect = 6e-92, Method: Compositional matrix adjust.
 Identities = 187/393 (48%), Positives = 277/393 (71%), Gaps = 0/393 (0%)

Query  4    ITRPLTNNEILKAKPREKDFTLHDGDGLFLLVKTSGKKLWRFRYQRPVSGSRTNLSLGSY  63
            ++  LT  +I  AKP++K + L DG+ L++ V+ S  + W+FRY+RP  +  T LS+G+Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PALTLAAVRQIRDQHLTTIAQGIDPqqqqeqASEKRQIELDSIFSTVAANWFKMKSKSVT  123
            P ++LA  R+   +    +A+GIDPQ  +E+   K   E ++ F  VA +W   K   + 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  EDYAKDIWRSLEKDVFPAIGAIPVQELKARTIVEALEPIKARGALETVRRLIQRVNEIMI  183
            E    + WR LE   FP +G+IPV  L A   + AL PI ++G LETV+R  Q +NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAVNTGLIDANPASGVGMAFERPKKQNMPTLRPEELPNLMRSLVMSNLSIPTRCLIEWQL  243
            YAVN+G+I+ANP +G+   F + K  +M +L+P+E+ +L+R++  +N+   TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  LTLVRPSEASGTRWAEIDLEAKLWTIPAERMKAKREHIVPLSSQALDILEVMKPISAHRE  303
             T+VRP+EASG+RW EID+  KLW IP ERMK +REH+VPL++Q+L ILE +KPIS+HRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  HIFPSRNDPKQPMNSQTANAALKRIGYAGKLVAHGMRSIASTAMNETGFNSDVIESALAH  363
             IFPS  +PK P +S+TAN AL R+G+ ++  AHG+R++AST++NE GF++DVIE+ALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  IEKNEVRRAYNRALYLEQRKELMQWWGNFINKA  396
             +KN++R+AYNR+ YL+ R+ LM WW++ I+K+
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

66) KPR_1464 in NC_021232


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  331 bits (1241),  Expect = 6e-92, Method: Compositional matrix adjust.
 Identities = 186/404 (47%), Positives = 285/404 (71%), Gaps = 1/404 (0%)

Query  4    ITTPLTNTEIRAAKPEVKEYTLQDGNGLYLLVKPSGSKIWRFSYYRPHDKKRALVSFGSI  63
            ++  LT  +I++AKP  K Y L DG  LY+ V+PS S+ W+F Y RP + K + +SFG+ 
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   NEVTLAEARKKRDEFRALIAQGIDPQAHQQQKREAEELRRGNTFQKVAADWYEMKKGQNL  123
             +++LAEAR K  E R  +A+GIDPQ  +++++      +  TF+ VA +W   K GQ +
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-I  119

Query  124  AANTIKDIWRSLEKYVLPDIGNTPINELTARKFVTVLEPIKARGNLETLKRVLQRINEVM  183
              +T+ + WR LE Y +P +G+ P++ LTA   ++ L PI ++G LET+KR  Q +NE+M
Sbjct  120  KEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  184  DFAANSGLIEINTAANVRKAFPTPVKKHMPTIRPEQLPDLMQTLSIARIERQTRLLIEWQ  243
            ++A NSG+I+ N  A +R  F      HM +++P+++ DL++T++ A I++ TR+LIEWQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  244  LLTVTRPAEAAEAKWEEINLTDNTWTIPAGRMKMRRDHVIPLSNQALAVLDAMRPISAHR  303
            L T+ RP EA+ A+WEEI++ ++ W IP  RMKM R+HV+PL+ Q+LA+L+A++PIS+HR
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  304  EYVFPSFKTPTLPMSSQSANAALRRMGYQGVLVSHGLRAIFSTAANEEGFEPDVIEAALA  363
            E++FPS + P +P  S++AN AL RMG+++   +HGLRA+ ST+ NE+GFEPDVIEAALA
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  364  HIDTNEVRRAYNRSNYLEKRIVLMCWWGEFVETASTGITLATGT  407
            H D N++R+AYNR++YL+ R  LM WW+E +E +S G    +GT
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGT  403

67) Pfl01_0747 in NC_007492


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  328 bits (1232),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 204/403 (51%), Positives = 291/403 (73%), Gaps = 0/403 (0%)

Query  5    ATRLSDRQLKAVKATGKDFVLSDGDGLQLRVRASGSMMWNFNYREPLTRSRLNMALGPYP  64
            A  L+ RQ+++ K+ +K + LSDG+ L + VR+S S  W+F Y+ P       +++G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DLSlanarkkaaearellalGIDPKTQRDEVRQAKLAETEHTFEKVATAWFELKKDSVTK  124
            D+SLA+AR KA EAR  LA GIDP+  ++E +   ++E + TF  VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHVFPSMKTTPLSQITAPMVIKILRPIEAKGSLETVKRLSQRLNEIMTY  184
               E+ WR L L  FP + + P+S++TAPM I  LRPIE++G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGLIFANPLNGIRAVFKKPKKENmaalppeelpelmmeiaNASIKRTTRCLIEWQLH  244
            +VNSG+I ANPL GIR VFKK K  +M AL P+E+ +L+  +A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAEAATTRWADIDFDKRIWTIPPERMKKRRPHTIPLTDQALSLLETLKQLSGNREY  304
            TM RP EA+ +RW +ID  +++W IP ERMK  R H +PLT Q+L++LE++K +SG+RE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSDRNPRTHANSQTANMALKRMGFQDRLVSHGLRSMASTILNEHGWDPELIEVALAHV  364
            +FPS RNP+  ++S+TAN AL RMGF+DR  +HGLR++AST LNE+G +P++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRTDYIERRRPMMAWWSEHIQKAATGSLSASAIN  407
            DK+++R AYNRTDY++ RR +M+WWSEHI+K++ GS S ++  
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

68) K734_08335 in NC_021286


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  328 bits (1231),  Expect = 4e-91, Method: Compositional matrix adjust.
 Identities = 191/393 (49%), Positives = 282/393 (72%), Gaps = 4/393 (1%)

Query  8    LNDSQIKKAKPKEKDCVFSDGGGLQLRIRASSGSKLWNFNYLHPVTKKRMNMGLGMYPEV  67
            L   QI+ AKPK+K   +SDGG L + +R+S+ S+ W+F Y +P   K   +++G YP++
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSN-SRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  68   SLKKARSLAEEARAKVAEGIDPKLSRDESIRTQRTEQESTLRKVAEDWFETKKTKVTDDY  127
            SL  AR  A EAR ++A+GIDP+L+++E      TEQ++T++ VAE+W  TK  ++ +  
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  128  ADDIWRSLELHVFPDLGKKPINEITAPMFIQVLKPIEKSGRLETVKRVIQRVNEIMVFAT  187
             ++ WR LEL  FP LG  P++ +TAPM I  L+PIE  G LETVKR  Q +NEIM +A 
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  188  NTGVIQANPLAGVKAAFQSPKKQHLPTIGKDELPVFLDKLQNTSVSKVTRHLIKWQLLTM  247
            N+GVI+ANPLAG++  F+  K  H+ ++  +E+  ++  +  +++  VTR LI WQL TM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  248  VRPSEAAGARWEEIERLDNGEVNWIIPAERMKKRRQHIVPLPTQAIKVLDKMKEISGNRE  307
            VRP+EA+GARWEEI+ +++    WIIP ERMK  R+H+VPL +Q++ +L+ +K ISG+RE
Sbjct  244  VRPNEASGARWEEIDMVNK---LWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  308  HIFISMKNPNTHVNSQTANMAIRRMDYKDKLVSHGLRALASTILNEEGKDPDLIESALAH  367
             IF S +NP+   +S+TAN A+ RM++KD+  +HGLRALAST LNE+G +PD+IE+ALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  368  TDPNQIRSAYNRSQYLERRRELMQWWGDYLDNA  400
            TD NQIR AYNR++YL+ RR LM WW++ ++++
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

69) intA in NC_006512


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  328 bits (1231),  Expect = 4e-91, Method: Compositional matrix adjust.
 Identities = 191/393 (49%), Positives = 282/393 (72%), Gaps = 4/393 (1%)

Query  8    LNDSQIKKAKPKEKDCVFSDGGGLQLRIRASSGSKLWNFNYLHPVTKKRMNMGLGMYPEV  67
            L   QI+ AKPK+K   +SDGG L + +R+S+ S+ W+F Y +P   K   +++G YP++
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSN-SRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  68   SLKKARSLAEEARAKVAEGIDPKLSRDESIRTQRTEQESTLRKVAEDWFETKKTKVTDDY  127
            SL  AR  A EAR ++A+GIDP+L+++E      TEQ++T++ VAE+W  TK  ++ +  
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  128  ADDIWRSLELHVFPDLGKKPINEITAPMFIQVLKPIEKSGRLETVKRVIQRVNEIMVFAT  187
             ++ WR LEL  FP LG  P++ +TAPM I  L+PIE  G LETVKR  Q +NEIM +A 
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  188  NTGVIQANPLAGVKAAFQSPKKQHLPTIGKDELPVFLDKLQNTSVSKVTRHLIKWQLLTM  247
            N+GVI+ANPLAG++  F+  K  H+ ++  +E+  ++  +  +++  VTR LI WQL TM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  248  VRPSEAAGARWEEIERLDNGEVNWIIPAERMKKRRQHIVPLPTQAIKVLDKMKEISGNRE  307
            VRP+EA+GARWEEI+ +++    WIIP ERMK  R+H+VPL +Q++ +L+ +K ISG+RE
Sbjct  244  VRPNEASGARWEEIDMVNK---LWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  308  HIFISMKNPNTHVNSQTANMAIRRMDYKDKLVSHGLRALASTILNEEGKDPDLIESALAH  367
             IF S +NP+   +S+TAN A+ RM++KD+  +HGLRALAST LNE+G +PD+IE+ALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  368  TDPNQIRSAYNRSQYLERRRELMQWWGDYLDNA  400
            TD NQIR AYNR++YL+ RR LM WW++ ++++
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

70) PflA506_4578 in NC_017911


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  327 bits (1228),  Expect = 7e-91, Method: Compositional matrix adjust.
 Identities = 203/403 (51%), Positives = 290/403 (72%), Gaps = 0/403 (0%)

Query  5    ATRLSDRQLKAVKATGKDFVLSDGDGLQLRVRASGSMMWNFNYREPLTRSRINMALGPYP  64
            A  L+ RQ+++ K+ +K + LSDG+ L + VR+S S  W+F Y+ P       +++G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DLSlanarkkaaearellalGTDPKTQRDEVRQAKLAETEHTFEKVATAWFELKKDSVTK  124
            D+SLA+AR KA EAR  LA G DP+  ++E +   ++E + TF  VA  W   K + +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AYAEDIWRSLTLHVFPSMKTTPLSQITAPMVIKILRPIEAKGSLETVKRLSQRLNEIMTY  184
               E+ WR L L  FP + + P+S++TAPM I  LRPIE++G LETVKR +Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  GVNSGLIFANPLNGIRAVFKKPKKENmaalppeelpelmmeiaNASIKRTTRCLIEWQLH  244
            +VNSG+I ANPL GIR VFKK K  +M AL P+E+ +L+  +A A+I++ TR LIEWQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAEAATTRWADIDFDKRIWTIPPERMKKRRPHTIPLTDQALSLLETLKQLSGNREY  304
            TM RP EA+ +RW +ID  +++W IP ERMK  R H +PLT Q+L++LE++K +SG+RE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSDRNPRTHANSQTANMALKRMGFQDRLVSHGLRSMASTILNEHGWDPELIEVALAHV  364
            +FPS RNP+  ++S+TAN AL RMGF+DR  +HGLR++AST LNE+G +P++IE ALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKDEVRSAYNRTDYIERRRPMMAWWSEHIQKAATGSLSASAIN  407
            DK+++R AYNRTDY++ RR +M+WWSEHI+K++ GS S ++  
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTG  404

71) RORB6_24510 in NC_021066


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  326 bits (1223),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 188/390 (49%), Positives = 273/390 (70%), Gaps = 0/390 (0%)

Query  4    ITRPLTNNEILKAKPREKDFTLHDGDGLFLLVKTSGKKLWRFRYQRPGSSSRTNLSLGSY  63
            ++  LT  +I  AKP++K + L DG+ L++ V+ S  + W+FRY+RPG    T LS+G+Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PALTLAAARQIRDQHLTTLAQGMDPqqqqeqaseqrqieLDSIFSTVAANWFQIKSRSVT  123
            P ++LA AR+   +    LA+G+DPQ  +E+   +   E ++ F  VA +W   K   + 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  EDYAKDIWRSLDKDVFPAIGAIPVQEIKARTIVEALEPIKARGALETVRRLVQRVNEIMI  183
            E    + WR L+   FP +G+IPV  + A   + AL PI ++G LETV+R  Q +NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAVNTGLIDANPASGVGMAFEKPKKKNMPTLQPEELPRLMRSLVMSNLSVATRCLIEWQL  243
            YAVN+G+I+ANP +G+   F K K  +M +LQP+E+  L+R++  +N+   TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  LTLVRPSEASGTSWAEIDLDAKLWTIPAERMKAKREHIVPLSPQALEILDVMKPISAHRE  303
             T+VRP+EASG+ W EID+  KLW IP ERMK +REH+VPL++Q+L IL+ +KPIS+HRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  HVFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGLNPDVIEAALAH  363
             +FPS  +PK P +S+TAN AL R+G+ ++  AHGLR++AST++NE G++PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  SDRNEVRKAYNRTTYLSQRKDLMLWWGNFI  393
            +D+N++RKAYNRT YL  R+ LM WW++ I
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

72) PSM_A2156 in NC_014803


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  326 bits (1223),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 193/408 (48%), Positives = 288/408 (71%), Gaps = 0/408 (0%)

Query  4    HNLKAKQVDSAKPKAKEYNLTDGGGLTLRIKPSGGKFWLYNYTAPITKKRKNMGLGSYPD  63
            +NL A+Q+++AKPK K Y L+DGG L + ++PS ++ W + Y  P   K   +++G+YPD
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  64   ISLKTARERHKKYKALVLENIDPIHQRQLDEKQAQETHLQTFKAVSLMWFEKKKTEIKPQ  123
            +SL  ARE+    +  + + IDP   ++ +  ++   +  TFK V+  W   K  +IK +
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEK  122

Query  124  TAQAALNLLTNHAFPAFGDEPISKLKAFQVIELVRPIEAKGSLETVKRLCQRINEVMVHA  183
            T ++    L   AFP +G  P+SKL A   I  +RPIE++G LETVKR  Q +NE+M  A
Sbjct  123  TLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYA  182

Query  184  VNCGLIEANPLANIRQAFQAPKKSAMPSIEVDRLPELMSALNRASIKLTTRCLIEWQLHT  243
            VN G+I+ANPLA IR+ F+  K   M +++ + + +L+ ++  A+I+  TR LIEWQLHT
Sbjct  183  VNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHT  242

Query  244  MTRPNEAATAKWQDIDLNTGVWVIPAEQMKKGKEQRIPLTPQALALLELMKPISAHREYV  303
            M RPNEA+ A+W++ID+   +W+IP E+MK  +E+ +PLT+Q+LA+LE +KPIS+HRE++
Sbjct  243  MVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFI  302

Query  304  FPADRDPRSHANVQTANAAIKRMGFKGELVAHGLRSLASTTLNAQGFDPDVIEAALAHVD  363
            FP+ R+P+  ++ +TAN A+ RMGFK+   AHGLR+LASTTLN QGF+PDVIEAALAH D
Sbjct  303  FPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTD  362

Query  364  TNEVRRAYNRTDYFERRKTMMCWWSEYIENaasgssslaglsYLKVLK  411
             N++R+AYNRTDY++ R+ +M WWSE IE+++ GS S+AG +YL +LK
Sbjct  363  KNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLK  410

73) ECO26_3102 in NC_013361


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  326 bits (1222),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 182/396 (46%), Positives = 277/396 (70%), Gaps = 1/396 (0%)

Query  5    THPLTTVQIKAARPAQKEYTLQDGGGLFLLVKPSGSKLWRFSYYRPSDKKRILLSFGSLE  64
            ++ LT+ QI++A+P +K Y L DGG L++ V+PS S+ W+F Y RP++ K   LSFG+  
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSLADARKRRSEYRTLISAGTDPQDHERQKRETEARRQGNTFENVAAAWYQVKISQNLA  124
            D+SLA+AR +  E R  ++ G DPQ    +++      Q  TF  VA  W   K +Q + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-IK  120

Query  125  PNTIKDIWRSLDKYVFPFIGNTPIDTLTARRFVEVLTPIKERGNLETLKRVLQRVNEVMD  184
             +T+ + WR L+ Y FP +G+ P+  LTA   +  L PI  +G LET+KR  Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YAANSGLIDANPAMNVRKAFPSPVKKHMPTIRPEQLPELMQALSVSATERQTRLLIEWQL  244
            YA NSG+I+ANP   +R  F      HM +++P+++ +L+++++ +  ++ TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTVTRPAEASSTRWDEINLDAKQWTIPAGRMKMRRDHVIPLSGQAMAVLEAMKPISHHRN  304
             T+ RP EAS++RW+EI++  K W IP  RMKM R+HV+PL++Q++A+LEA+KPIS HR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YVFPSLKDPQQPMNSQTANAALRRMGFAGVLVSHGLRAIFSTAANEEGFEPDVIEAALAH  364
            ++FPS ++P+ P +S+TAN AL RMGF +   +HGLRA+ ST+ NE+GFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSNYIEKRIVLMRWWGEFVEAAATG  400
             D N++R+AYNR++Y++ R  LM WW+E +E ++ G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

74) int in NC_011312


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  325 bits (1221),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 198/390 (51%), Positives = 283/390 (73%), Gaps = 0/390 (0%)

Query  8    LTATQVKQAKPKDKEYNLGDGDGLSLKVKPIGTKLWRFSYYHPITRKRLNLALGKYPDIS  67
            LTA Q++ AKPKDK Y L+DG+ L + V+P  ++ W+F Y +P   K   L++G YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LAKARSKAIEAREILADGIDPKEHRDNTLREKQLELSNTLQAVFDDWLEVKKTSIKEQTA  127
            LA AR KA+EAR  LADGIDP+  +++       E + T++ V ++W   K   IKE+T 
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  KKLKQRIEkyllpdlgklplgdITAPQAIKTIKPIANQGKLETVGRLCRNLNEIMTFAVN  187
                +++E Y +P LG +P++ +TAP AI +++PI +QG LETV R  + +NEIM +AVN
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  TGVIEHNRLAGIGKAFETAKVTNQASLDPKDLPELLKTINYASIKPITRCLLEWQLHTMT  247
            +GVI+ N LAGI   F   KV +  +L+P ++ +L++T+  A+I+ +TR L+EWQLHTM 
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV  244

Query  248  RPAETAGARWNEIDKEKMLWVIPAERMKKGRVHTVPLTKQTLDLLETIDFITGESEYLFP  307
            RP E++GARW+EID  + LW+IP ERMK  R H VPLT QTL +LE+I  I+G+ E++FP
Sbjct  245  RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP  304

Query  308  ADKSNKNHINKETANKALVRMGFKGRQTSHGLRALASTTLNEQNFDSDIIEAALSHVDRD  367
            + ++ K   + ETANKAL RMGFK+R T+HGLRALASTTLNEQ F++D+IEAAL+H D++
Sbjct  305  SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN  364

Query  368  KVRSAYNRTDYLERRKVLMAWWSNHIEEAA  397
            ++R AYNRTDYL+ R+ LM+WWS+HIE ++
Sbjct  365  QIRKAYNRTDYLDSRRKLMSWWSEHIEKSS  394

75) intA in NC_011745


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  325 bits (1219),  Expect = 3e-90, Method: Compositional matrix adjust.
 Identities = 182/396 (46%), Positives = 277/396 (70%), Gaps = 1/396 (0%)

Query  11   THPLTTVQIKAARPAQKEYTLQDGGGLFLLVKPSGSKLWRFSYYRPSDKKRILLSFGSLE  70
            ++ LT+ QI++A+P +K Y L DGG L++ V+PS S+ W+F Y RP++ K   LSFG+  
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  71   DVSLADARKRRSEYRTLISAGTDPQDHERQKRETEARRQGNTFENVAAAWYQVKISQNLA  130
            D+SLA+AR +  E R  ++ G DPQ    +++      Q  TF  VA  W   K +Q + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-IK  120

Query  131  PNTIKDIWRSLDKYVFPFIGNTPIDTLTARRFVEVLTPIKERGNLETLKRVLQRVNEVMD  190
             +T+ + WR L+ Y FP +G+ P+  LTA   +  L PI  +G LET+KR  Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  191  YAANSGLIDANPAMNVRKAFPSPVKKHMPTIRPEQLPELMQALSVSATERQTRLLIEWQL  250
            YA NSG+I+ANP   +R  F      HM +++P+++ +L+++++ +  ++ TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  251  LTVTRPAEASSTRWDEINLDAKQWTIPAGRMKMRRDHVIPLSGQAMAVLEAMKPISHHRN  310
             T+ RP EAS++RW+EI++  K W IP  RMKM R+HV+PL++Q++A+LEA+KPIS HR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  311  YVFPSLKDPQQPMNSQTANAALRRMGFAGVLVSHGLRAIFSTAANEEGFEPDVIEAALAH  370
            ++FPS ++P+ P +S+TAN AL RMGF +   +HGLRA+ ST+ NE+GFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  371  VDTNEVRRAYNRSNYIEKRIVLMRWWGEFVEAAATG  406
             D N++R+AYNR++Y++ R  LM WW+E +E ++ G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

76) SBO_2134 in NC_007613


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  324 bits (1216),  Expect = 6e-90, Method: Compositional matrix adjust.
 Identities = 182/396 (46%), Positives = 275/396 (70%), Gaps = 1/396 (0%)

Query  5    TPPLTTVQIKAARPAEKEYTLQDGGGLFLLVKPSGSKLWRFSYYRPSDKKRILLSFGSLD  64
            +  LT+ QI++A+P +K Y L DGG L++ V+PS S+ W+F Y RP++ K   LSFG+  
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSLADARKRRSEYRALISAGTDPQGHEKKKREAEARRQGNTFENVAAAWYQVKISQNLA  124
            D+SLA+AR +  E R  ++ G DPQ     ++      Q  TF  VA  W   K +Q + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-IK  120

Query  125  PNTIKDIWRSLDKYVFPFIGNTPIDTLTARRFVEVLTPIKERGNLETLKRVLQRVNEVMD  184
             +T+ + WR L+ Y FP +G+ P+  LTA   +  L PI  +G LET+KR  Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YAANSGLIDANPAMNVRKAFPSPVKKHMPTIRPEQLPELMQALSVSATERQTRLLIEWQL  244
            YA NSG+I+ANP   +R  F      HM +++P+++ +L+++++ +  ++ TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTVTRPAEASSTRWDEINLDAKQWTIPAGRMKMRRDHVIPLSGQAMAVLEAMKPISHHRN  304
             T+ RP EAS++RW+EI++  K W IP  RMKM R+HV+PL++Q++A+LEA+KPIS HR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YVFPSLKDPQQPMNSQTANAALRRMGFAGVLVSHGLRAIFSTAANEEGFEPDVIEAALAH  364
            ++FPS ++P+ P +S+TAN AL RMGF +   +HGLRA+ ST+ NE+GFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSNYIEKRIVLMRWWGEFVEAAATG  400
             D N++R+AYNR++Y++ R  LM WW+E +E ++ G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

77) ECO111_2908 in NC_013364


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  322 bits (1207),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 185/396 (47%), Positives = 273/396 (69%), Gaps = 1/396 (0%)

Query  5    TPPLTTVQIKAARPAEKEYTLQDGGGLFLLIKPSGSKLWRFSYYRPSDKKRILLSFGSLD  64
            +  LT+ QI++A+P +K Y L DGG L++ ++PS S+ W+F Y RP++ K   LSFG+  
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSLADARKRRSEYRALIRAGTDPQDHERQKRETEARRQGNTFENVATAWYQVKISQNLA  124
            D+SLA+AR +  E R  +  G DPQ    +++      Q  TF  VA  W   K +Q + 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ-IK  120

Query  125  PNTIKDIWRSLEKYVFPFIGNTPIDTLTARRFVEVLTPIKERGNLETLKRVLQRVNEVMD  184
             +T+ + WR LE Y FP +G+ P+  LTA   +  L PI  +G LET+KR  Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  YAANSGMIDANPAMNVRKAFPSPVKKHMPTIRPEQLPELMQALSVSATERQTRLLIEWQL  244
            YA NSG+I+ANP   +R  F      HM +++P+++ +L+++++ +  ++ TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTVTRPVEASSARWEEIDMEAQRWTIPAGRMKMRRDHVIPLCDQAMAVLEAMKPISHHRD  304
             T+ RP EAS+ARWEEIDM  + W IP  RMKM R+HV+PL  Q++A+LEA+KPIS HR+
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  YVFPSLKDPRQPMNSQTANAALRRMGFAGVLVSHGLRAIFSTAANEEGFEPDVIEAALAH  364
            ++FPS ++P+ P +S+TAN AL RMGF +   +HGLRA+ ST+ NE+GFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSNYIEKRVVLMRWWGEFVEAAATG  400
             D N++R+AYNR++Y++ R  LM WW+E +E ++ G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

78) EC042_2422 in NC_017626


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  322 bits (1206),  Expect = 4e-89, Method: Compositional matrix adjust.
 Identities = 187/402 (47%), Positives = 279/402 (70%), Gaps = 1/402 (0%)

Query  5    ATPLTTTQIKAAKPAEKEYTLQDGGGLFLVIKPSGSKLWRFNYYRPSNKKRTIISLGSLD  64
            A  LT+ QI++AKP +K Y L DGG L++ ++PS S+ W+F Y RP++ K T +S+G+  
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLADARKRRSEYRTLIASGIDPQHHerqkreaearrqGNTFENVAASWYEMKKNQNLA  124
            ++SLA+AR +  E R  +A GIDPQ    +++      Q  TF  VA  W    K+ ++ 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW-KATKEGQIK  120

Query  125  HNTIKDIWRSLEKYVFPYIGNTPIDTLTARRFVEILTPIKTRGNLETLKRVLQRINEVMD  184
            ++T+ + WR LE Y FP +G+ P+  LTA   +  L PI ++G LET+KR  Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  FAANSGLIDINTAANVRKAFPSPTKKHMPTIRPEQLPQLMHDLSIASIERQTRLLIEWQL  244
            +A NSG+I+ N  A +R  F      HM +++P+++ +L++ ++ A+I++ TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTATRPAEASAARWEEINLDAATWTIPAGRMKMRRDHVIPLCAQAMAVLEAMKPISARRE  304
             T  RP EAS+ARWEEI++    W IP  RMKM R+HV+PL AQ++A+LEA+KPIS++RE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  HVFPSLKNPVQPMSSQTANAALRRMGYTGVLVSHGLRAIFSTAANEEGFEPDVIEAALAH  364
             +FPS +NP  P  S+TAN AL RMG+ +   +HGLRA+ ST+ NE+GFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSNYLEKRKVLMCWWGDFVEAASTGTTIASG  406
             D N++R+AYNR++YL+ R+ LM WW++ +E +S G+   +G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

79) Ping_0234 in NC_008709


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  320 bits (1200),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 178/402 (45%), Positives = 278/402 (70%), Gaps = 0/402 (0%)

Query  4    TTPLSDTQIRLTKASDKVITLSDGGGLQLRIKPNGSKLWQLRFNKPIEKKPALMGFGAYP  63
            +  L+  QI+ +K+ DK+  LSDGG L + ++P+ S+ WQ+R+++P + K + ++FG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  64   AISLANARKLREAANELLAQGINPKAQRDSEIKEKELILNNTFEMVTAAWIKLKASEVKP  123
             +SLA+AR     A   LA+GI+P+  ++ +        N TF  V+  W   K +++K 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  124  DSLKTISTTLTNHILPRIGKCPITEITAPMAIEALRPIEAKGNHEVIARACQYLNQIMRY  183
             +L      L    +P++G  P++ +TAPMAI ALRPIE++G  E + R+ Q +N+IM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  184  ATNLGMIHSNPLTGIKGVFMTKKITNNPHVKPEELPQLLMAIATANIKKITRNLILWQLH  243
            A N G+IH+NPL+GI++VF   K+ +   ++P+E+ +L+ ++ATANI+ +TR LI WQLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  244  TMTRPAETALAQWNEIDYENNLWIIPGERIKTGMTHQIPLTVQTLAILEACKVISGNSDY  303
            TM RP E++ A+W+EID  N+LWIIP ER+K    H +PLT QTLAILEA K ISG+ ++
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  304  IFPADRNPNAHANKASANMAFKRMGYQGRQTAHGLRGLARTTLSDKGVAYEPSEACLSHK  363
            IFP+ RNP+  ++  +AN A+ RMG+++R TAHGLR+LA TTL+++G   +  EA L+H 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  364  VGNSVSQSYNHSTYLNQRIKIMAWWSNYIEEASYGNISMAGS  405
              N + ++YN++ YL+ R K+M+WWS+ IE +SYG+ S+AG+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGT  403

80) Ent638_3101 in NC_009436


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  319 bits (1197),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 185/390 (48%), Positives = 270/390 (70%), Gaps = 0/390 (0%)

Query  4    ITRPLTNNEILKAKPREKDFTLHDGDGLFLLVKTSGKKLWRFRYQRPNSTSRTNLSLGAY  63
            ++  LT  +I  AKP++K + L DG+ L++ V+ S  + W+FRY+RP     T LS+G+Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PALTLAAARLIRDQHLSLLAQDIDPqqqqeivseqrqiKLDSVFSTVAANWFQLKSKSVT  123
            P ++LA AR    +    LA++IDPQ  +E    +     ++ F  VA +W   K   + 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  PDYAKDIWRSLDKDVFPAIGEIPVQEIKARTIIEALEPIKARGALETVRRLVQRINEIMI  183
                 + WR L+   FP +G IPV  + A   I AL PI ++G LETV+R  Q +NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAVNTGLLDANPASGVGMAFERPKKQNMLTLRPEELPKLMRSIGMSNLSVPTRCLIELQL  243
            YAVN+G+++ANP +G+   F + K  +M +L+P+E+  L+R+++ +N+   TR LIE QL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  LTLVRPSEASGARWAEIDIDAKLWKIPAERMKAKREHIVPLSPQALEILEIMTPISAHRE  303
             T+VRP+EASGARW EID+  KLW IP ERMK +REH+VPL++Q+L ILE + PIS+HRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  YVFPSRNDPKQPMNSQTANAAIKRIGYGGRLVAHGLRSIASTAMNEEGFNPDVIEAALAH  363
            ++FPS  +PK P +S+TAN A+ R+G+ +R  AHGLR++AST++NE+GF+PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  SDKNEVRRAYNRSTYLEARRELMDWWGSAI  393
            +DKN++R+AYNR+ YL++RR LM WW+  I
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

81) H650_08995 in NC_021500


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  318 bits (1193),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 190/395 (49%), Positives = 275/395 (70%), Gaps = 1/395 (0%)

Query  5    TRPLTNTEVSRAKATDKDLTLHDGDGLFLMVKTSGKKLWRFRYQRPTTKQRTMIGLGAFP  64
            +  LT  ++  AK+ DK   L DG+ L++ V+ S  + W+FRY+RP   + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLAEARGLRAQYLSLLARGIDPqiqaeqaeeqqqiaLESIFSNVAANWFAMKRNSVTP  124
             +SLAEAR    +    LA GIDPQ+  E+   +     ++ F  VA +W A K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDIFPAIGEIPVQKIRARTLVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV K+ A   + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSIPTRCLIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEAAGTQWAEIDLDAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHRDH  304
            T+VRP+EA+G++W EID+  KLW IP ERMK +REH+VPL++Q+L ILE +KPIS+HR+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRNDPQQSMNSQTANAALKRIGYGGKLVAHGLRSIASTTLNEEGFNGDVIESALAHA  364
            IFPS  +P+ + +S+TAN AL R+G+ ++  AHGLR++ASTTLNE+GF+ DVIE+ALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNKSTYLNQRRDLMAWWGTKI-KNSYG  398
            DKN++RKAYN++ YL+ RR LM+WW+  I K+SYG
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYG  396

82) SbBS512_E0767 in NC_010658


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  318 bits (1192),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 185/402 (47%), Positives = 278/402 (70%), Gaps = 1/402 (0%)

Query  5    ATPLTTTQIKAAKPAEKEYTLQDGGGLFLVIKPSGSKLWRFNYYRPSNKKRTLISLGSLD  64
            A  LT+ QI++AKP +K Y L DGG L++ ++PS S+ W+F Y RP++ K T +S+G+  
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   EVSLADARKRRSEYRTLIAAGTDPqeyerqkreaearrqGNTFENVAALWYEMKKNQNLA  124
            ++SLA+AR +  E R  +A G DPQ    +++      Q  TF  VA  W    K+ ++ 
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW-KATKEGQIK  120

Query  125  HNTIKDIWRSLEKYVFPYIGNTPIDTLTARRFVEILTPIKARGNLETLKRVLQRINEVMD  184
            ++T+ + WR LE Y FP +G+ P+  LTA   +  L PI ++G LET+KR  Q +NE+M+
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  185  FAANSGMIDINTAANVRKTFPSPTKKHMPTIRPEQLPQLMHDLSIASIERQTRLLIEWQL  244
            +A NSG+I+ N  A +R  F      HM +++P+++ +L++ ++ A+I++ TR+LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  245  LTATRPAEASAARWEEINLEAATWTIPAGRMKMRRDHVIPLCAQAMAVLEAMKPISARRE  304
             T  RP EAS+ARWEEI++    W IP  RMKM R+HV+PL AQ++A+LEA+KPIS++RE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  305  HVFPSLKNPVQPMSSQTANAALRRMGYTGVLVSHGLRAIFSTAANEEGFEPDVIEAALAH  364
             +FPS +NP  P  S+TAN AL RMG+ +   +HGLRA+ ST+ NE+GFEPDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  VDTNEVRRAYNRSNYLEKRKVLMCWWGDFVEAAATGTTIASG  406
             D N++R+AYNR++YL+ R+ LM WW++ +E ++ G+   +G
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

83) ECA0835 in NC_004547


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  317 bits (1189),  Expect = 8e-88, Method: Compositional matrix adjust.
 Identities = 177/392 (46%), Positives = 271/392 (70%), Gaps = 0/392 (0%)

Query  32   TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQVPGTSKRTMISLGAYP  91
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ PG  K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  92   ALSLADAREVRSEKLAILVKGIDPQARAGEEAEKLQIAQESIFVNVARKWFELKQSHVSA  151
             +SLA+ARE   E    L  GIDPQ    E+  K    Q++ F  VA +W   K++++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  152  DHAKDIWRSIEKDILPSIENVPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  211
                + WR +E   +P + ++P+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  212  AVNVGLIEANPASGIGNAFERPKKQHMPIIRPEELPKLMRTISMSNLSIPTRCLLEWQLL  271
            AVN G+I+ANP +GI + F + K  HM  ++P+E+  L+RT++ +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  272  TLIRPAEASATAWSEIDIENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQY  331
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R++
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  332  VFPSRNDPRKPMNSQTANAALKRIGYSGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  391
            +FPS  +P+ P +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  392  DKNEVRRAYNRSTYLTQRVELLGWWGEFVNRT  423
            DKN++R+AYNR+ YL  R  L++WW+E ++++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

84) Spea_1281 in NC_009901


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  316 bits (1185),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 193/393 (50%), Positives = 283/393 (73%), Gaps = 0/393 (0%)

Query  5    TKQLTATQVSNAKPKEKEYNLADGRGLSLRVKTGGSKFWLLNYTRPVTQKRANLGLGTYP  64
            +++LTA Q+  AKPK+K Y L+DG  L + V+ + S+ W + Y RP  +K + L++GTYP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVPlaearkrreaarellaQGIDPqhhqqqqKAAIKTDAENTLKSVTNAWFEIKKQKVSE  124
            D++LAEAR +   AR  LA+GIDPQ  +++QKA   T+ + T+K V++ W   K  ++ E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  NHGQKLYRRLELYLFPALGGTPISVLTAPQVIQVLKPAEAKGNIETCKRVISWLNEVMTF  184
            +  +   R+LELY FP LG+ P+S LTAP  I  L+P E++G +ET KR    +NE+M +
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIHSNPLIGIAAAFGVPEKRQMPTLKPAELPEFIEALTYSSIKKTTRCLIEIQLH  244
            AVN+G+IH+NPL GI   F      +M +L+P E+ ++I +++ ++I+  TR LIE QLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMTRPAEAAKAKWTEIDFDKQLWTIPAERMKMKREHIIPLTPQVISLLNRMHEISGDLEY  304
            TM RP EA+ A+W EID  ++LW IP ERMKM+REH++PLT+Q +++L+ +  ISG+ E+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPADRNKHHHTNTETANMAIKRMGYKGRLVAHGLRALASTTLNEQGFDAELIEVSLAHV  364
            IFP+ RN    T++ETAN A+ RMG+K+R  AHGLRALASTTLNEQGF++++IE +LAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNTVRAAYNRADYIERRRELMCWWSEHVQITP  397
            DKN +R AYNR+DY++ RR LM WWSEH++ ++
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSS  394

85) EBL_c09420 in NC_017910


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  316 bits (1185),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 184/386 (48%), Positives = 267/386 (70%), Gaps = 0/386 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRTDYLALLANGIDPqiqaevaeeaqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E          ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV ++ A   + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGVGMAFEKPKKQSMPTLRPEELPKLMRSLIMSNLSVPTRCLIEWQLL  244
            AVN+G+I+ANP +G+   F K K   M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLDAKLWTIPAERMKANREHVVPLSPQALEILEVMKPISAHREH  304
            T+VRP+EASGARW EID+  KLW IP ERMK NREHVVPL++Q+L ILE +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALTHS  364
            +FPS  +PK P +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAAL+H+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLEARKELMDWWG  390
            DKN++R+AYNR+ YL++R+ LM WW+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWS  387

86) CFSAN001992_19740 in NC_020307


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  316 bits (1183),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 186/392 (48%), Positives = 273/392 (70%), Gaps = 0/392 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV ++ A + + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREH  304
            T+VRP+EASGARW EID+  KLW IP ERMK +REH+VPL++Q+L ILE +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHI  364
            +FPS  +PK P +S+TAN AL R+G+ ++  AHGLRA+AST++NE G+++DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  EKNEVRRAYNRSTYLERRKELMSWWGNFIVNS  396
            +KN++R+AYNR+ YL+ R+ LMSWW++ I +S
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

87) SNSL254_A2952 in NC_011080


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  316 bits (1183),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 186/392 (48%), Positives = 273/392 (70%), Gaps = 0/392 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV ++ A + + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREH  304
            T+VRP+EASGARW EID+  KLW IP ERMK +REH+VPL++Q+L ILE +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHI  364
            +FPS  +PK P +S+TAN AL R+G+ ++  AHGLRA+AST++NE G+++DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  EKNEVRRAYNRSTYLERRKELMSWWGNFIVNS  396
            +KN++R+AYNR+ YL+ R+ LMSWW++ I +S
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

88) SN31241_38450 in NC_021902


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  316 bits (1183),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 186/392 (48%), Positives = 273/392 (70%), Gaps = 0/392 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV ++ A + + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREH  304
            T+VRP+EASGARW EID+  KLW IP ERMK +REH+VPL++Q+L ILE +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHI  364
            +FPS  +PK P +S+TAN AL R+G+ ++  AHGLRA+AST++NE G+++DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  EKNEVRRAYNRSTYLERRKELMSWWGNFIVNS  396
            +KN++R+AYNR+ YL+ R+ LMSWW++ I +S
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

89) ESA_00630 in NC_009778


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  315 bits (1182),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 184/390 (48%), Positives = 271/390 (70%), Gaps = 0/390 (0%)

Query  4    ITRPLTNNEILKAKPREKDFTLHDGDGLFLLVKTSGKKLWRFRYQRPASSSRTNLSLGSY  63
            ++  LT  +I  AKP++K + L DG+ L++ V+ S  + W+FRY+RP+    T LS+G+Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PALTLAAARQIRDQHLTLLAQGIDPqqqqeqvseqrqieLDSIFTTVATNWFQLKSKSVT  123
            P ++LA AR+   +    LA+GIDPQ  +E+   +   E ++ F  VA +W   K   + 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  ADYAKDIWRSLDKDVFPAIGALPVQEIKARTIIEALGPIKARGALETVRRLVQRINEIMI  183
                 + WR L+   FP +G++PV  + A   I AL PI ++G LETV+R  Q +NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMHSLVMSNLSIPTRCLIEWQL  243
            YAVN+G+I+ANP +G+   F K K  +M +L+P+E+  L++++  +N+   TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  LTLVRPSEASGTRWAEIDLDARLWTIPAERMKAKREHIVPLSPQALEILKVMKPISAHRE  303
             T+VRP+EASG+RW EID+  +LW IP ERMK +REH+VPL++Q+L IL  +KPIS+HRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  HVFPSRNNPKQAMNSQTANAALKRIGFGGKLVAHGLRSIASTAMNEAGLNPDVIEAALAH  363
             +FPS  NPK + +S+TAN AL R+GF ++  AHGLR++AST++NE G++PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  SDKNEVRKAYNRSSYIIQRIELMQWWAHFV  393
            +DKN++RKAYNR+ Y+  R  LM WW++ +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

90) intA in NC_011748


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  315 bits (1180),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 182/408 (45%), Positives = 284/408 (70%), Gaps = 0/408 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGSYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP   K +  S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G ++V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEALWEEVDIEAREWKIPAARMKMNRDHTVPLSDEAIAILEMMKPLSGNREF  304
            T+ RP EA+ A WEE+D+  + W IP  RMKMNR+H VPL+ +++AILE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVMAADHGSMIEGGIKAMRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS   +G   ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

91) O3M_06375 in NC_018650


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  315 bits (1180),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 182/408 (45%), Positives = 284/408 (70%), Gaps = 0/408 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGSYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP   K +  S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G ++V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEALWEEVDIEAREWKIPAARMKMNRDHTVPLSDEAIAILEMMKPLSGNREF  304
            T+ RP EA+ A WEE+D+  + W IP  RMKMNR+H VPL+ +++AILE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVMAADHGSMIEGGIKAMRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS   +G   ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

92) O3O_19320 in NC_018661


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  315 bits (1180),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 182/408 (45%), Positives = 284/408 (70%), Gaps = 0/408 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGSYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP   K +  S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G ++V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEALWEEVDIEAREWKIPAARMKMNRDHTVPLSDEAIAILEMMKPLSGNREF  304
            T+ RP EA+ A WEE+D+  + W IP  RMKMNR+H VPL+ +++AILE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVMAADHGSMIEGGIKAMRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS   +G   ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

93) O3K_06330 in NC_018658


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  315 bits (1180),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 182/408 (45%), Positives = 284/408 (70%), Gaps = 0/408 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGSYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP   K +  S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G ++V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEALWEEVDIEAREWKIPAARMKMNRDHTVPLSDEAIAILEMMKPLSGNREF  304
            T+ RP EA+ A WEE+D+  + W IP  RMKMNR+H VPL+ +++AILE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVMAADHGSMIEGGIKAMRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS   +G   ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

94) int in NC_011740


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  313 bits (1175),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 182/392 (47%), Positives = 273/392 (70%), Gaps = 0/392 (0%)

Query  5    TRPLTNTELSRAKATAKDLTLHDGNGLFLLVKTNGRKLWRFRYQKPVTKQRTMIGLGSFP  64
            +  LT  ++  AK+  K   L DG  L++ V+ +  + W+FRY++P   + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLAEARNTRAEYLSLLARGIDPQIYSEQVTVQQQIAEDSIFSNVASKWFAIKRNNVTP  124
             +SLAEAR+   E    LA GIDPQ+  E+   +    +++ F  VA +W A K  ++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDVWRSLERDIFPTIGEIPVQKIKARTLIETLEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV K+ A   I +L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKKNMPTLRPEELPKLMYSLSMSNLSVQTRCLIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L+ +++ +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGTQWKEIDFDAKLWRIPAERMKAKREHIVPLSPKALDILEVMKTISAHREY  304
            T+VRP+EASG++W EID   KLW IP ERMK +REH+VPL++++L ILE +K IS+HRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPQKPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAEFNADVIESALAHS  364
            +FPS  +P+ P +S+TAN AL R+G+ ++  AHGLR++AST++NE  F++DVIE+ALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLEQRKNLMNWWSSFVHKS  396
            DKN++RKAYNR+ YL+ R++LM+WWS  ++KS
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

95) PC1_0723 in NC_012917


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  313 bits (1173),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 181/397 (46%), Positives = 269/397 (68%), Gaps = 0/397 (0%)

Query  4    IARPLTHTEVSKARTPDKELSLHDGDGLFLLIKPSGKKLWRFRYLRPDTKKRTTLSFGSY  63
            +A  LT  ++  A+  DK   L DG+ L++ ++PS  + W+FRY RP+  K T LSFG+Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PALSLAEARQLRAEHLALLAKGIDPqqkvakeeeeaqiaveSIFINVARNWFTLKQTKVS  123
            P +SLAEAR+   E    LA GIDPQ     +   +    ++ F  VA +W + K+ ++ 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  ADHAKDIWRSLEKDVLPAIENIPVQEIKARTLIQALEPIKARGALETVRRLVQRINEIMV  183
                 + WR LE   +P + +IPV  + A   I AL PI ++G LETV+R  Q +NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAVNTGLIDANPASGIGMAFERPKKQHMPTIRPEEIPKLMRTIAMSNLSIPTRCLLEWQL  243
            YAVN+G+I+ANP +GI   F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  LTLIRPAEASATAWAEIDIEKRTWSIPAERMKAKRDHIVPLSDQALELLDIMRPISGNRE  303
             T++RP EAS++ W EID+ ++ W IP ERMK +R+H+VPL+ Q+L +L+ ++PISG+RE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  HVFPSRNDPKKPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNPDVIEAALAH  363
             +FPS  +PK P +S+TAN AL R+G+ ++  AHGLR++AST++NE GF+PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  IESNDVRKAYNRSTYLEHRKELMDWWGMQCTSAKYEA  400
             + N++RKAYNR+ YL+ R+ LM WW+ +   + Y +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS  397

96) UMN798_2960 in NC_017046


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  313 bits (1172),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 183/386 (48%), Positives = 269/386 (70%), Gaps = 0/386 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRADYLALLANGIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G  PV ++ A   + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLTVPTRCLIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLDKKLWTIPAERMKAKREHIVPLSPQALGILDVMKPISAHREH  304
            T+VRP+EASGARW EID+ +KLW IP ERMK +REH+VPL++Q+L+IL+ +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQSMNSQTANAALKRIGYGGRLVAHGLRSIASTALNESGFNADVIEAALAHS  364
            +FPS  +PK + +S+TAN AL R+G+ +R  AHGLR++AST+LNE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLNKRIELMAWWG  390
            DKN++R+AYNR+ YL+ R  LM+WW+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWS  387

97) SL1344_2712 in NC_016810


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  313 bits (1172),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 183/386 (48%), Positives = 269/386 (70%), Gaps = 0/386 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRADYLALLANGIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G  PV ++ A   + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLTVPTRCLIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLDKKLWTIPAERMKAKREHIVPLSPQALGILDVMKPISAHREH  304
            T+VRP+EASGARW EID+ +KLW IP ERMK +REH+VPL++Q+L+IL+ +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQSMNSQTANAALKRIGYGGRLVAHGLRSIASTALNESGFNADVIEAALAHS  364
            +FPS  +PK + +S+TAN AL R+G+ +R  AHGLR++AST+LNE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLNKRIELMAWWG  390
            DKN++R+AYNR+ YL+ R  LM+WW+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWS  387

98) STM474_2864 in NC_016857


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  313 bits (1172),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 183/386 (48%), Positives = 269/386 (70%), Gaps = 0/386 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRADYLALLANGIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G  PV ++ A   + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLTVPTRCLIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLDKKLWTIPAERMKAKREHIVPLSPQALGILDVMKPISAHREH  304
            T+VRP+EASGARW EID+ +KLW IP ERMK +REH+VPL++Q+L+IL+ +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQSMNSQTANAALKRIGYGGRLVAHGLRSIASTALNESGFNADVIEAALAHS  364
            +FPS  +PK + +S+TAN AL R+G+ +R  AHGLR++AST+LNE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLNKRIELMAWWG  390
            DKN++R+AYNR+ YL+ R  LM+WW+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWS  387

99) ETAE_2742 in NC_013508


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  312 bits (1170),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 182/389 (47%), Positives = 268/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRADYLALLANEIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+ IDPQ+  E    +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  EYAKDIWRSLEKDVFPAIGELPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G +PV ++ A + + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDTNPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLL  244
            AVN+G+I++NP +G+   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWSEIDLDAKLWTIPAERMKAKREHIVPLSTQALDILEVMKPISAHREH  304
            T+VRP+EASGARW EID+  KLW IP ERMK +REH+VPL++Q+L ILE +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTSMNEAGFNSDVIEAALAHI  364
            +FPS  +PK P +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLQKRIELMSWWGALI  393
            DKN++R+AYNR+ YL+ R  LMSWW+  I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

100) I607_10285 in NC_021710


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  312 bits (1169),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 186/389 (48%), Positives = 272/389 (70%), Gaps = 0/389 (0%)

Query  5    VTALSATQVKQAKPRDAEYNLSDGKGLALRIKPNGSKLWIFNYSKPHTKKRSNIGIGSYP  64
               L+A Q++ AKP+D  Y LSDG  L + ++P+ S+ W F Y +P   K + +++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSLADAREHREAFRKLLAkdvdpkehkdhekekALFSASQTFESVAKQWFEIHASKVSE  124
            D+SLA+ARE     RK LA ++DP+  K+++K K++   + TF  VA QW     +++ E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  GTLKNIKRSFSNDVFPLVGRVPIEQLTAPKAIEVINAIVGRNSHEIARKVARRMNSVMTY  184
             TL    R +    FP +G +P+ +LTAP AI  + +I ++   E  ++ A+ MN +M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNAGIIHHNPLIGIKELIPSTKVKHQPTLQPEELPELVKALKYSSAKITTRCLIEFQLH  244
            AVN+G+IH NPL GI++++   KV H  +LQP+E+ +L++++  ++ +  TR LIE QLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMVRPGEAAEAKWSEIDFSQSIWAIPAERMKMDRPHLVPLTPQVLEILELMKPLSFHREY  304
            TMVRP EA+ A+W EID  + +W IP ERMKM+R H+VPLT+Q L ILE +KP+S HRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSHVDPKKPANKQSANKALRDMGFRGRLVAHGMRALASTTLNEEGFDHDVIEAALAHK  364
            +FPS  +PK P++ ++ANKAL  MGF++R  AHG+RALASTTLNE+GF+ DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DENEVRAAYNRAQYLDRRRSMMEWWSNKI  393
            D N++R AYNR++YLD RR +M WWS+ I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

101) I876_10625 in NC_021717


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  312 bits (1169),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 186/389 (48%), Positives = 272/389 (70%), Gaps = 0/389 (0%)

Query  5    VTALSATQVKQAKPRDAEYNLSDGKGLALRIKPNGSKLWIFNYSKPHTKKRSNIGIGSYP  64
               L+A Q++ AKP+D  Y LSDG  L + ++P+ S+ W F Y +P   K + +++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSLADAREHREAFRKLLAkdvdpkehkdhekekALFSASQTFESVAKQWFEIHASKVSE  124
            D+SLA+ARE     RK LA ++DP+  K+++K K++   + TF  VA QW     +++ E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  GTLKNIKRSFSNDVFPLVGRVPIEQLTAPKAIEVINAIVGRNSHEIARKVARRMNSVMTY  184
             TL    R +    FP +G +P+ +LTAP AI  + +I ++   E  ++ A+ MN +M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNAGIIHHNPLIGIKELIPSTKVKHQPTLQPEELPELVKALKYSSAKITTRCLIEFQLH  244
            AVN+G+IH NPL GI++++   KV H  +LQP+E+ +L++++  ++ +  TR LIE QLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMVRPGEAAEAKWSEIDFSQSIWAIPAERMKMDRPHLVPLTPQVLEILELMKPLSFHREY  304
            TMVRP EA+ A+W EID  + +W IP ERMKM+R H+VPLT+Q L ILE +KP+S HRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSHVDPKKPANKQSANKALRDMGFRGRLVAHGMRALASTTLNEEGFDHDVIEAALAHK  364
            +FPS  +PK P++ ++ANKAL  MGF++R  AHG+RALASTTLNE+GF+ DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DENEVRAAYNRAQYLDRRRSMMEWWSNKI  393
            D N++R AYNR++YLD RR +M WWS+ I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

102) I634_10495 in NC_021712


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  312 bits (1169),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 186/389 (48%), Positives = 272/389 (70%), Gaps = 0/389 (0%)

Query  5    VTALSATQVKQAKPRDAEYNLSDGKGLALRIKPNGSKLWIFNYSKPHTKKRSNIGIGSYP  64
               L+A Q++ AKP+D  Y LSDG  L + ++P+ S+ W F Y +P   K + +++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVSLADAREHREAFRKLLAkdvdpkehkdhekekALFSASQTFESVAKQWFEIHASKVSE  124
            D+SLA+ARE     RK LA ++DP+  K+++K K++   + TF  VA QW     +++ E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  GTLKNIKRSFSNDVFPLVGRVPIEQLTAPKAIEVINAIVGRNSHEIARKVARRMNSVMTY  184
             TL    R +    FP +G +P+ +LTAP AI  + +I ++   E  ++ A+ MN +M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNAGIIHHNPLIGIKELIPSTKVKHQPTLQPEELPELVKALKYSSAKITTRCLIEFQLH  244
            AVN+G+IH NPL GI++++   KV H  +LQP+E+ +L++++  ++ +  TR LIE QLH
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TMVRPGEAAEAKWSEIDFSQSIWAIPAERMKMDRPHLVPLTPQVLEILELMKPLSFHREY  304
            TMVRP EA+ A+W EID  + +W IP ERMKM+R H+VPLT+Q L ILE +KP+S HRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSHVDPKKPANKQSANKALRDMGFRGRLVAHGMRALASTTLNEEGFDHDVIEAALAHK  364
            +FPS  +PK P++ ++ANKAL  MGF++R  AHG+RALASTTLNE+GF+ DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DENEVRAAYNRAQYLDRRRSMMEWWSNKI  393
            D N++R AYNR++YLD RR +M WWS+ I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

103) W5S_0850 in NC_017845


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  312 bits (1168),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 177/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGNGLFLLVKTTGKKLWRFRYQKPTTGQRTMIGFGAYP  64
            +  LT  ++Q AK+ DK   L DG  L++ V+ +  + W+FRY++P  ++ T ++FG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARAMRDEKLSLLAKGIDPQekaakeeeeakIAVESIFLNVARSWFALKQTNVSA  124
             +SLA+AR    E    LA GIDPQ     +   +    ++ F  VA  W A K+ ++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DHAKDIWRSLEKDVLPAIENIPVQDIKARTLIQALEPIKARGALETVRRLVQRINEIMVY  184
                + WR LE   +P + +IPV  + A   I AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFERPKKQHMPTIRPEELPKLMHTIAMSNLSIPTRCLLEWQLL  244
            AVN+G+I+ANP +GI   F + K  HM +++P+E+  L++T+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWAEIDMEKRTWSIPAERMKAKRDHIVPLSDQALELLDIMRPISGNREH  304
            T++RP EAS++ W EIDM ++ W IP ERMK +R+H+VPL+ Q+L +L+ ++PISG+RE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKKPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNPDVIEAALAHC  364
            +FPS  +PK P +S+TAN AL R+G+ ++  AHGLR++AST++NE GF+PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLEQRKELMDWWGNFV  393
            DKN++R+AYNR+ YL+ R+ LM WW++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

104) Pecwa_0958 in NC_013421


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  311 bits (1165),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 177/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGNGLFLLVKTTGKKLWRFRYQKPTTGQRTMIGFGAYP  64
            +  LT  ++Q AK+ DK   L DG  L++ V+ +  + W+FRY++P  ++ T ++FG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARAMRDEKLSLLAKGIDPQekvakeeeeakiaveSIFLNVARSWFALKQTNVSA  124
             +SLA+AR    E    LA GIDPQ     +   +    ++ F  VA  W A K+ ++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DHAKDIWRSLEKDVLPAIENIPVQEIKARTLIQALEPIKARGALETVRRLVQRINEIMVY  184
                + WR LE   +P + +IPV  + A   I AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFERPKKQHMPTIRPEELPKLMRTIAMSNLSIPTRCLLEWQLL  244
            AVN+G+I+ANP +GI   F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWAEIDIEKRTWSIPAERMKAKRDHIVPLSDQALELLDIMRPISGNREH  304
            T++RP EAS++ W EID+ ++ W IP ERMK +R+H+VPL+ Q+L +L+ ++PISG+RE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKKPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNPDVIEAALAHC  364
            +FPS  +PK P +S+TAN AL R+G+ ++  AHGLR++AST++NE GF+PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLEQRKELMDWWGNFV  393
            DKN++R+AYNR+ YL+ R+ LM WW++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

105) M621_19565 in NC_021659


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  311 bits (1165),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 184/408 (46%), Positives = 281/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQLRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQ+RY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   TVSLSDARKLRAESRALLAKDIDPQEHQKEQVRNSQEAKTNTFMLVAERWWNVKKVSVTE  124
             +SL++AR    E+R  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K   + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDLEAREWKIPASRMKMNRDHTVPLSDEAIAVLEVMKSFSGNREF  304
            T+ RP EA+ ARW+EID+  + W IP  RMKMNR+H VPL+ +++A+LE +K++SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEKRRPMMQWWADFVKSADNGSIVEIGSKRLKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS    G+  L L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

106) Ping_2496 in NC_008709


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  311 bits (1164),  Expect = 7e-86, Method: Compositional matrix adjust.
 Identities = 202/403 (51%), Positives = 287/403 (72%), Gaps = 3/403 (0%)

Query  4    IIKPLSPTDVSTAETKESEYNLSDGNGLFLRVKPVGSKFWIFNYQRPITKKRANLTLGRY  63
            + + L++ ++ TA  K+  Y LSDG  L++ V+P  S+ W F Y+RP   K + L++G Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PDLPLAKARTKAIEARELLAEGIDPKEHRDSTLKAKQAELSNTLQVVFEDWFTVKKTSIK  123
            PD++LA AR KA+EAR  LA+GIDP+  ++       +E + T++ V E+W + K   IK
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  ELTAKKLKQRLDKYLLTYLGKFPISEITAPQTIKILQPVANQGKLETVARLCRNLNEIMV  183
            E T     ++L+ Y +  LG +P+S +TAP +I  L+P+ +QG LETV R  + +NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  FAVNTGIIEHNKLAGIGKAFANAQVTNQASLKPEELPELLTALNYADIKLITRCLIEWQL  243
            +AVN+G+I+ N LAGI   F + +V +  +L+P+E+ +L+ ++  A+I+ +TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  HTMTRPSETAGARWDEIDRENKLWHIPAERMKKGRPHtvllttqtlalletIDAITGDSE  303
            HTM RP+E++GARW+EID  NKLW IP ERMK  R H V LT+QTLA+LE+I +I+G+ E
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  YIFPADKTNKKHINKETANKALQRMGFKGRQTSHGLRALASTTLNEQNVFDADVIEAALS  363
            +IFP+ +  K   + ETANKAL RMGFK+R T+HGLRALASTTLNEQ  F++DVIEAAL+
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVIEAALA  359

Query  364  HVDK--VRSAYNRTDYLERRRVLMGCWSDHIEAASKGSNSITG  404
            H DK  +R AYNRTDYL+ RR LM+ WS+HIE +S GS S++G
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

107) Entcl_1101 in NC_014618


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  310 bits (1161),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 182/408 (45%), Positives = 278/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGPYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP   K +  S+G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARSYRTESRSLLAKQIDPQEHQQEQLRSSLEAKTNSFQLVAERWWNVKKASVTE  124
             ++LA+AR    E+R  LA  IDPQ  ++EQ   ++  +  +F++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDEAIAILEMMKPLSGSREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+ +++AILE +KP+SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSHIKTNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHV  364
            IFPS  + + P +S+T N +L R GF +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVMAAEHGSMIGNGIRGIRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS    G   ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

108) SPAB_03429 in NC_010102


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  309 bits (1160),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 181/392 (47%), Positives = 271/392 (70%), Gaps = 0/392 (0%)

Query  5    TRSLTNTEVLRTKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFP  64
            + +LT  ++  +K+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGIRADYLALLANGIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRPLEKDVFPAIGEIPVQQIKARTLIEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV ++ A   I AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMHSLVMSNLSVSTCCFIEWQLL  244
            AVN+G+I+ANP +GI   F K K  +M +L+P+E+  L++++  +N+   T  +IEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLDTKLWTIPAERMKAKREHIVLLSPQALEILDVMKPISAHREH  304
            T+VRP+EASGARW EID+  KLW IP ERMK +REH+V L++Q+L IL+ +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQAMNSQTANAALKRIGFGGKLVAHGLRSIASTAMNEAGFSPDIIEAALAHS  364
            +FPS  +PK + +S+TAN AL R+GF ++  AHGLR++AST++NE GF PD+IEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLEQRKDLMSWWGLFVNKT  396
            DKN++R+AYNR+ YL+ R+ LMSWW+  ++K+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

109) A1122_19345 in NC_017168


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

110) YpAngola_A1370 in NC_010159


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

111) YPA_0577 in NC_008150


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

112) YPC_1149 in NC_017265


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

113) YPO1098 in NC_003143


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

114) YPD4_0956 in NC_017154


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

115) YPD8_1174 in NC_017160


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

116) YPN_2899 in NC_008149


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

117) YPDSF_2598 in NC_009381


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

118) YPZ3_0998 in NC_014029


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1155),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  64
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  124
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  184
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  244
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  304
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  364
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  393
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

119) int3 in NC_016816


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1154),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 188/408 (47%), Positives = 279/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESRVLLAKDIDPQQHQKEQVRNSQEAKTNTFLLVAERWWNVKKASVTE  124
             +SL++AR    E+R  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAYDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
                + WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISVSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFVASEWKIPAARMKMNRDHTVPLSNEALSILEMMKSLSGGREF  304
            T+ RP EA+ ARW+EID V   W IP  RMKMNR+H VPL+ ++L+ILE +K++SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPTQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P  P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWAEFVNKADSGSIVDNGKRELKLV  412
            DKN++R+AYNR+DYL+ RR +M WW+E ++K+  GS    G   L L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

120) intA1 in NC_005810


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1153),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  16   TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  75
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  76   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  135
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  136  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  195
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  196  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  255
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  256  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  315
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  316  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  375
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  376  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  404
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

121) intA in NC_004088


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  308 bits (1153),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 266/389 (69%), Gaps = 0/389 (0%)

Query  16   TRPLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYP  75
            +  LT  ++Q AK+ DK   L DG+ L++ V+ +  + W+FRY+ P   K T +S+G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  76   ALSLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSA  135
             +SLA+ARE   E    L  G DPQ    E+  K    +++ F  VA +W   KE+++  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  136  AHAKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIY  195
                + WR +E   +P + +IP+  L A   I  L PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  196  AVNVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLL  255
            AVN G+I+ANP +GI + F + K  HM +++P+E+  L+RT+A +N+   TR L+EWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  256  TLIRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQH  315
            T++RP EAS++ W EID+ NK W IP ERMK +R+H+VPL+ Q+L +LE ++PISG+R+ 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  316  VFPSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHS  375
            +FPS  +P+   +S+TAN AL R+G+ ++  AHGLR++AST++NE GF++DVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  376  DKNEVRKAYNRSTYLIQRQELMNWWGLEI  404
            DKN++RKAYNR+ YL  R+ LM+WW+ +I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

122) CFSAN001921_03570 in NC_021814


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  307 bits (1152),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 185/408 (46%), Positives = 282/408 (70%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKSKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGSYP  64
            ++ LT  +I++AK+KD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESKVLLAKGIDPQEYQKEQIRNSQEAKTNTFLLVAERWWNVKKASVTE  124
             +SL++AR    E++  LA GIDPQ  + EQ  ++   +  TF +VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDIFPAIGNVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G+++V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWNEIDFDANEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGRDF  304
            T+ RP EA+ ARW+EID   + W IP  RMKMNR+H VPL+  +LAILE +KP+SG R+F
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPTQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHV  364
            IFPS  +P  P +S+T N AL R G+ +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVKRADKGSMVESSAGALKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ + ++  GS   +++G L L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

123) ST548_p3272 in NC_020181


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  306 bits (1147),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 185/408 (46%), Positives = 279/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDTDYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKASVTE  124
             +SL++AR    E++  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFDANEWKIPAARMKMNRDHTVPLSDGALTILELMKSLSGGREF  304
            T+ RP EA+ ARW+EID   + W IP  RMKMNR+H VPL+  +L+ILE +K++SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPTQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P  P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVSKADRGSIVETGKTGLKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ + K+  GS   +G   L L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

124) M892_07330 in NC_022269


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  306 bits (1147),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 169/402 (43%), Positives = 271/402 (68%), Gaps = 0/402 (0%)

Query  8    LSATQVKNLKSQAKEFSIGDGDGLLLRIMPNGTKSWLFNYIHPSTKKRKNIGLGKYPDVS  67
            L+A Q++  K++ K + ++DG+ L + + P+ ++SW F Y +P+  K   +++G YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LATAREQRQTMRELVAKGIDPKTHRDNQQTAEKLAAQDTLLHVAKEWFELKQHSVSSDYA  127
            LA ARE+    R  +A GIDP+  +++Q++      + T+  VA +W   K+  +     
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  DDIWRSLELHIFPNLGQLPLREILAPTVIAQLRPLEAKGSLETVKRVCQRLNEVMTYAVN  187
            ++ WR LEL  FP+LG +P+  + AP  IA LRP+E++G LETVKR  Q +NE+M YAVN
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  CGKVEANPIANIKQVFKKPKVKHMKTITPQDLSFLLESMSKVNIKLVTRCAFEFQLHTLT  247
             G ++ANP+A I++VFKK KV HMK++ P+++  L+ +++  NI+ VTR  +E QLHT+ 
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV  244

Query  248  RPSECVKAEWNEIDFAQKLWTIPKDKMKMKRDHKIPLSDPVIKLLQFMKPISFEHKYVFP  307
            RP+E   A W+EID  +KLW IPK++MKM+R+H +PL+   + +L+ +KPIS ++ ++FP
Sbjct  245  RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP  304

Query  308  SDAKAGSHMNSQSVNAAIKRAGFSGKLVSHGMRSIGSTALNEQGFNKDAIELCLAHVDKN  367
            S  ++    +S++ N A+ R GF ++  +HG+R+++ST+LNEQGF+ D IE  LAH DKN
Sbjct  305  SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN  364

Query  368  TIRDIYNNAEYLEERRNVMQWWSEYIISASKNTFILAKNPNL  409
             IR  YN ++YL+ RR++M WWSE I  +S  ++ +A    L
Sbjct  365  QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYL  406

125) VIBHAR_01122 in NC_009783


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  306 bits (1147),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 169/402 (43%), Positives = 271/402 (68%), Gaps = 0/402 (0%)

Query  8    LSATQVKNLKSQAKEFSIGDGDGLLLRIMPNGTKSWLFNYIHPSTKKRKNIGLGKYPDVS  67
            L+A Q++  K++ K + ++DG+ L + + P+ ++SW F Y +P+  K   +++G YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LATAREQRQTMRELVAKGIDPKTHRDNQQTAEKLAAQDTLLHVAKEWFELKQHSVSSDYA  127
            LA ARE+    R  +A GIDP+  +++Q++      + T+  VA +W   K+  +     
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  DDIWRSLELHIFPNLGQLPLREILAPTVIAQLRPLEAKGSLETVKRVCQRLNEVMTYAVN  187
            ++ WR LEL  FP+LG +P+  + AP  IA LRP+E++G LETVKR  Q +NE+M YAVN
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  CGKVEANPIANIKQVFKKPKVKHMKTITPQDLSFLLESMSKVNIKLVTRCAFEFQLHTLT  247
             G ++ANP+A I++VFKK KV HMK++ P+++  L+ +++  NI+ VTR  +E QLHT+ 
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV  244

Query  248  RPSECVKAEWNEIDFAQKLWTIPKDKMKMKRDHKIPLSDPVIKLLQFMKPISFEHKYVFP  307
            RP+E   A W+EID  +KLW IPK++MKM+R+H +PL+   + +L+ +KPIS ++ ++FP
Sbjct  245  RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP  304

Query  308  SDAKAGSHMNSQSVNAAIKRAGFSGKLVSHGMRSIGSTALNEQGFNKDAIELCLAHVDKN  367
            S  ++    +S++ N A+ R GF ++  +HG+R+++ST+LNEQGF+ D IE  LAH DKN
Sbjct  305  SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN  364

Query  368  TIRDIYNNAEYLEERRNVMQWWSEYIISASKNTFILAKNPNL  409
             IR  YN ++YL+ RR++M WWSE I  +S  ++ +A    L
Sbjct  365  QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYL  406

126) YPTS_1211 in NC_010634


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  305 bits (1144),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 188/408 (47%), Positives = 279/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKLRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP     T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESRSLLAKEIDPQEHQKEQVRNSHEAKTNTFLLVAERWWYLKKASVTE  124
             +SL++AR    E+R  LA  IDPQ  + EQ  ++   +  TF +VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAQDIWRSLERDVFPVIGDISVTEIKAHTLVKAIQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSINIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTANIILPTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TANI   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEINFDAKEWKIPAARMKMNREHTVPLSDEALTILEMMKPLSSNREF  304
            T+ RP EA+ ARW+EI+   K W IP  RMKMNREH VPL+ ++L+ILE +KP+S++REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPTQSMNSQTVNAALKRAGLGGILVSHGLRSIASTALNEQGFSPDVIEAALAHV  364
            IFPS  +P  + +S+T N AL R G+ +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVNKADSGSIITNGKRELKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ ++K+  GS    G   L L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

127) CSSP291_03150 in NC_020260


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  305 bits (1143),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 184/408 (46%), Positives = 277/408 (68%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKASGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESRVLLAKDIDPQEHQKEQMRNSQEAKTNTFLLVAERWWNVKKASVTE  124
             +SL++AR    E+R  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFDVNEWKIPAARMKMNRDHTVPLSNEALSILEMMKSLSGGREF  304
            T+ RP EA+ ARW+EID   + W IP  RMKMNR+H VPL+ ++L+ILE +K++SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPTQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFLPDAIEAALAHV  364
            IFPS  +P  P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PD IEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVSKADSGCIVENGKRELKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ + K+  G     G   L L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

128) ETAF_2475 in NC_017309


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  305 bits (1143),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 186/408 (46%), Positives = 277/408 (68%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   TVSLSDARKLRAESRVLLAKDIDPQEHQKEQVRNSQEAKTNTFFLVAERWWNVKKTSVTE  124
             +SL++AR    E+R  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K   + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISMSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFDASEWKIPAARMKMNRDHTVPLSDGALTILEMMKSLSGGREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+  +L+ILE +K++SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPTQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P  P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVSKADRGSIVETGKTRLKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ + K+  GS   +G   L L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

129) intA in NC_012759


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  304 bits (1138),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 183/408 (45%), Positives = 279/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTE  124
             +SL++AR    E++  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K   + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+++ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+  +LAILE +KP+SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS  ++  + ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

130) EcDH1_1053 in NC_017625


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  304 bits (1138),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 183/408 (45%), Positives = 279/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTE  124
             +SL++AR    E++  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K   + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+++ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+  +LAILE +KP+SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS  ++  + ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

131) intA in NC_017638


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  304 bits (1138),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 183/408 (45%), Positives = 279/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTE  124
             +SL++AR    E++  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K   + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+++ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+  +LAILE +KP+SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS  ++  + ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

132) intA in NC_000913


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  304 bits (1138),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 183/408 (45%), Positives = 279/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTE  124
             +SL++AR    E++  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K   + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+++ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+  +LAILE +KP+SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS  ++  + ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

133) intA in NC_007779


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  304 bits (1138),  Expect = 8e-84, Method: Compositional matrix adjust.
 Identities = 183/408 (45%), Positives = 279/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTE  124
             +SL++AR    E++  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K   + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+++ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+  +LAILE +KP+SG REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P+ P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS  ++  + ++L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

134) A225_4472 in NC_018106


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  301 bits (1129),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 179/391 (46%), Positives = 265/391 (68%), Gaps = 0/391 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGPFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ S  + W+FRY+RP+  + T +++G +P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   ALSLADARGLRADYLALLANGIDPqvqaevaeeeLQIALDSIFLTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E          ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV ++ A   + AL PI ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLL  244
            AVN+G+I+ANP +G+   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGARWAEIDLDSKLWTIPAERMKAKREHIVPLSSQALEILEVMKPISAHREH  304
            T+VRP+EASGARW EID+ +KLW IP ERMK +REH+VPL++Q+L ILE +KPIS+HRE 
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTYLNEEGLESDIIESCLAHI  364
            +FPS  +PK P +S+TAN AL R+G+ ++  AHGLR++AST LNE+G+E+D+IE+ LAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSTYLERRKITMEYWGGFVKR  395
            DKN++R+AYNR+ YL+ R+  M  W+  + +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEK  392

135) intA in NC_013956


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  301 bits (1128),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 183/389 (48%), Positives = 267/389 (69%), Gaps = 0/389 (0%)

Query  5    TRPLTNTEVLRAKAVDKELTLHDGDGLFLLVKTSGKKLWRFRYQRPKTKQRTMMGLGAFP  64
            +  LT  ++  AK+ DK   L DG+ L++ V+ S  + W+FRY+RP   + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   alsladarrlraEYLSLLANGIDPqtqaeqateqqqIALESIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    E    LA+GIDPQ   E+   +     ++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKVRGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G IPV ++ A   + AL PI  +G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  ATNTGLIDANPGSGIGMAFEKPKKQNMPTLRPEELPNLMRSLAMSNLSVTTRCLIEWQLL  244
            A N+G+I+ANP +GI   F K K  +M +L+P+E+ +L+R++A +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGTRWIEIDFAAKLWVIPAERMKSKREHIVPLSPQALDILEVLKPISVHREY  304
            T+VRP+EASG+RW EID   KLW+IP ERMK +REH+VPL++Q+L ILE +KPIS HRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPRQPMNSQTANAALKRIGYRGKLVAHGLRSIASTALNESNFNSDVIESALAHS  364
            +FPS  +P+ P +S+TAN AL R+G++++  AHGLR++AST+LNE  F++DVIE+ALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DRNEVRKAYNRSIYLKQRVELMDWWGNFV  393
            D+N++RKAYNR+ YL  R  LM WW++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

136) EcolC_1063 in NC_010468


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  301 bits (1126),  Expect = 7e-83, Method: Compositional matrix adjust.
 Identities = 180/391 (47%), Positives = 272/391 (70%), Gaps = 0/391 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLLVKTNGKKLWRFRYQRPATKQRTMMGLGAFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ +  + W+FRY+RP+  + T +++G++P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   alsladarrlradylsllaNGIDPqiqaeiaeeqqqiaqDSIFSTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +    Q++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAKDIWRSLEKDVFPAVGEMPVQQIKARTLVEALEPVKARGALETVRRLVQRINEIMIY  184
                + WR LE   FP +G +PV ++ A   + AL P+ ++G LETV+R  Q +NEIM Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSIPTRCLIEWQLL  244
            AVN+G+I+ANP +G+   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASSTRWEEIDLHAKLWTIPAERMKAKREHIIPLSSQALEILNVMKPISAHREY  304
            T+VRP+EAS++RWEEID+  KLW IP ERMK +REH++PL++Q+L IL+ +KPIS+HRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNDPKKPMNSQTANAALKRIGFGGKLVAHGLRSIASTAMNEAGLNPDVIESALAHS  364
            +FPS  +PK P +S+TAN AL R+GF ++  AHGLR++AST++NE G++PDVIE+ALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLVQRIELMDWWGEYVKN  395
            DKN++RKAYNR+ YL  R  LM WW+E + +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEK  392

137) Dda3937_01705 in NC_014500


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  300 bits (1124),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 178/392 (46%), Positives = 271/392 (70%), Gaps = 0/392 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQDAKTNTFLLVAERWWNVKKASVTE  124
             +SL++AR    E++  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLFQRINEVMIY  184
               ++ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISVSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSNEALSILEMMKSLNGGREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+ ++L+ILE +K+++G REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPTKPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHV  364
            IFPS  +P  P +S+T N AL R G+ +   +HGLR++AST+LNE+GF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVKSA  396
            DKN++R+AYNR+DYL+ RR +M WW++ +  +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

138) intA in NC_006841


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  300 bits (1124),  Expect = 1e-82, Method: Compositional matrix adjust.
 Identities = 171/392 (44%), Positives = 271/392 (70%), Gaps = 2/392 (0%)

Query  8    LTDRKIKSAAPTGKEFTLSDGEGLQLRVRPTGAKSWQFKFSDPVTRKIQKIALGPYPELS  67
            LT R+I++A P +K + LSDG  L + VRP+ ++SWQF++  P   KI  +++G YP++S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  68   LANARSKTTEYRTLLAQKINPKSFEQSKELEAKRVQTSTFIVVAEQWFERKKETVSPAHS  127
            LA+AR K+ E R  LA+ I+P+   + +   +   Q +TF  VAEQW   K   +     
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  128  YREWRTLEKYIFPHMSKIPVATITAVETIDVLRPLEKEGKYSTVKRICQSLNQIMDYSVN  187
              +WR LE Y FP ++ IPV+ +TA  +I  LRP+E +G   TVKR  Q +N+IM+Y+VN
Sbjct  125  EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN  184

Query  188  HGLIHANPLAKIIKVFRKNTVLHMPTIRPEQLPDFLKRLHSCSTIQTKTKLLILWQLHTM  247
             G+IHANPLA I  VF+K+ V+HM +++P+++ D+++ + + + IQ  T++LI WQLHTM
Sbjct  185  SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTV-ATANIQHVTRFLIEWQLHTM  243

Query  248  TRPKEAATTRWIDIDLEKGVWTIPAENMKRRKEHRIPLTSQAINILNQIRLQSKRCDYVF  307
             RP+EA+ +RW +ID+ + +W IP E MK  +EH +PLT+Q++ IL+ I+  S + +++F
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF  303

Query  308  PGERDINSHVSLFTANAAIKRSLGLKDELVAHGLRAIASTALHEYGFDSLLIEACLSHAD  367
            P+ R+ +      TAN A+ R +G+KD   AHGLRA+AST+L+E GF++ +IEA L+H+D
Sbjct  304  PSSRNPKVPTDSETANKALGR-MGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTD  362

Query  368  QNEVRASYNRSDYLEQRKEIMCWWSNYIDEAA  399
            +N++R +YNR+DYL+ R+ +M WWS+ I+ ++
Sbjct  363  KNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSS  394

139) PAGR_g1112 in NC_017554


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  299 bits (1120),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 175/377 (47%), Positives = 258/377 (69%), Gaps = 4/377 (1%)

Query  34   GMDLYLLVKTSDKKLWRFRYQRPTSSSRTNLSLGSYAALTLAVARQMRDKYLSLLAQGID  93
            G +LY+ V+ S+ + W+FRY+RP     T LS+G+Y+ ++LA AR+        LA+GID
Sbjct  25   GGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMSLAEAREKALEARKQLADGID  84

Query  94   PQKQQEEVSEQRQIELDSIFLVVAGRWFQLKRKSVTVNYAKDIWRSLEKDIFLSIGEIPV  153
            PQ  +EE   +   E ++ F  VA +W   K   +  +   + WR LE   F  +G IPV
Sbjct  85   PQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTLEGNWRKLELYAFPKLGSIPV  144

Query  154  QTLKARTIVKALEPIKPRGALETIPRLVQRINEIMIYAVNTGLIDANPASGVGMAFEKPK  213
              L A   + AL PI ++G LET+ R  Q +NEIM YAVN+G+I+ANP +G+   F K K
Sbjct  145  SKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVNSGVIHANPLAGIRDVFKKHK  204

Query  214  KQNMPTFRPEELPKLMRSLIMSNLSVSTRCLIEWQLLTLVRPSEASGTRWQEIDLDTKLW  273
              +M +++P+E+  L+R++  +N+   TR LIEWQL T+VRP+EASG+RW+EID+  KLW
Sbjct  205  VVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMVRPNEASGARWEEIDMVNKLW  264

Query  274  TIPAVRMKAKREHIVPLSPQALDILEVMKAISAHREYVFPSRNDPQQPMNSQTANAALKR  333
             IP  RMK +REH+VPL++Q+L ILE +K+IS+HRE++FPS  +P+ P +S+TAN AL R
Sbjct  265  IIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFPSSRNPKVPTDSETANKALGR  324

Query  334  IGYGGKLVAHGLRSIASTAMNEAGFKADVIEAALAHSDKNEVRSAYNRSTYLVLRQELVT  393
            +G+ ++  AHGLR++AST++NE GF +DVIEAALAH+DKN++R AYNR+ YL  R+ L++
Sbjct  325  MGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKNQIRKAYNRTDYLDSRRKLMS  384

Query  394  WWSNLV----YNQFIIN  406
            WWS+ +    Y  + + 
Sbjct  385  WWSEHIEKSSYGSYSVA  401

140) TY21A_13395 in NC_021176


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  299 bits (1122),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 182/389 (47%), Positives = 273/389 (71%), Gaps = 0/389 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLLVKTNGKKLWRFRYQRPATKQRTMMGLGTFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ +  + W+FRY+RP+  + T +++GT+P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   alsladarrlradylsllaNGIDPqiqaeiaeeqqqiaqDSIFTTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +    Q++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYARDIWRSLEKDVFPAVGELPVQQIKARTLVEALEPVKARGALETVRRLVQRINEIMIF  184
                + WR LE   FP +G +PV ++ A   + AL P+ ++G LETV+R  Q +NEIM +
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPNLMRSLAMSNLSVSTRCLIEWQLL  244
            AVN+G+I+ANP +G+   F K K  +M +L+P+E+ +L+R++A +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGTQWAEIDLENKLWTIPAGRMKAKREHIVPLSVRALDILEIMKPISAHREY  304
            T+VRP+EASG++W EID+ NKLW IP  RMK +REH+VPL+ ++L ILE +KPIS+HRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNNPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEEGFNPDVIEAALAHS  364
            +FPS  NPK P +S+TAN AL R+G+ ++  AHGLR++AST++NE+GF+PDVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLYQRIDLMNWWANFV  393
            DKN++RKAYNR+ YL  R  LM+WW++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

141) t2647 in NC_004631


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  299 bits (1122),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 182/389 (47%), Positives = 273/389 (71%), Gaps = 0/389 (0%)

Query  5    TRPLTNTEVLRAKALEKDLTLHDGDGLFLLVKTNGKKLWRFRYQRPATKQRTMMGLGTFP  64
            +  LT  ++  AK+ +K   L DG+ L++ V+ +  + W+FRY+RP+  + T +++GT+P
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   alsladarrlradylsllaNGIDPqiqaeiaeeqqqiaqDSIFTTVAANWFQLKSKSVTP  124
             +SLA+AR    +    LA+GIDPQ+  E    +    Q++ F  VA +W   K   +  
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYARDIWRSLEKDVFPAVGELPVQQIKARTLVEALEPVKARGALETVRRLVQRINEIMIF  184
                + WR LE   FP +G +PV ++ A   + AL P+ ++G LETV+R  Q +NEIM +
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPNLMRSLAMSNLSVSTRCLIEWQLL  244
            AVN+G+I+ANP +G+   F K K  +M +L+P+E+ +L+R++A +N+   TR LIEWQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TLVRPSEASGTQWAEIDLENKLWTIPAGRMKAKREHIVPLSVRALDILEIMKPISAHREY  304
            T+VRP+EASG++W EID+ NKLW IP  RMK +REH+VPL+ ++L ILE +KPIS+HRE+
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  VFPSRNNPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEEGFNPDVIEAALAHS  364
            +FPS  NPK P +S+TAN AL R+G+ ++  AHGLR++AST++NE+GF+PDVIEAALAH+
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRKAYNRSTYLYQRIDLMNWWANFV  393
            DKN++RKAYNR+ YL  R  LM+WW++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

142) D781_3430 in NC_020064


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  298 bits (1117),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 267/389 (69%), Gaps = 0/389 (0%)

Query  5    TKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYP  64
            ++ LT  +I++AKPKD  Y+L DG+ L + +++S S+ WQFRY RP   + T  SFG+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   AVSLSDARKLRAESRVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTE  124
             +SL++AR    E+R  LA +IDPQ  + EQ  ++   +  TF +VAE+W   K   + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIY  184
               ++ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIHPGQLPLLMKTMRMASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P ++  L++T+  A+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPAEAAEARWDEIDFDTSEWKIPAARMKMNRDHTVPLSNEALSILEMMKSLSGDREF  304
            T+ RP EA+ ARW+EID     W IP  RMKMNR+H VPL+ ++L+ILE +K++SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPTQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPSDVIEAALAHV  364
            IFPS  +P  P +S+T N AL R G+ +   +HGLR++AST+LNE+GF +DVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFV  393
            DKN++R+AYNR+DYL+ RR +M WW++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

143) S70_03250 in NC_017731


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  294 bits (1103),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 179/396 (46%), Positives = 264/396 (67%), Gaps = 2/396 (0%)

Query  18   AKPNQAGELKDTIFR--DGDGLELLAKVSGSRRWYFRYYKPLTQKRTMIAIGEYPAIGLA  75
            A+  Q++  KD ++R  DG+ L +  + S SR W FRY +P  +K T +++G YP ++LA
Sbjct  7    ARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMSLA  66

Query  76   DARKIKDEYKSLLAQNIDPLDWGKQQQAIAQEENSHTLEKVATRWIAIKRTTVTPDYAND  135
            +AR    E +  LA+ IDP     +Q+A +  E++ T+  VA +W A K   +     ++
Sbjct  67   EAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTLEG  126

Query  136  VWRSLEKDIFPKLGKMPVSLLKAPMLVEILKPIQARGNLETIKRLTQRTVEIMDFAMNAG  195
             WR LE   FPKLG +PVS L APM +  L+PI+++G LET+KR +Q   EIM++A+N+G
Sbjct  127  NWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVNSG  186

Query  196  IIDANPFTTVSKAFPKPKKKHNPTLKPDELPRLMRALSVAQIELSTRLVIEWQLLTVTRP  255
            +I+ANP++ +   F K K  H  +L+P+E+  L+R+++ A+I+  TR++IEWQL T+ RP
Sbjct  187  VIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMVRP  246

Query  256  GEAVQARWSEIDFDNKLWNVPAETMKMGHAHTIPLNQPALDILEVMKPISGHREFVFPHR  315
             EA  ARW EID  NKLW +P E MKM + H +PL   +L ILE +KPISGHREF+FP  
Sbjct  247  NEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFPSS  306

Query  316  SEPSKSMNSQTANMALKRMGFEGLLTAHGMRAIASTAMNEQEFMPDAIEAVLAHREKNSV  375
             +P  + +S+TAN AL RMGF +  TAHG+RA+AST++NEQ F PD IEA LAH +KN +
Sbjct  307  RNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKNQI  366

Query  376  RAAYNRSTYLEQRKVIMDWWGQFVKGAATGDMTAAE  411
            R AYNR+ YL+ R+ +M WW++ +  ++ G  + A 
Sbjct  367  RKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG  402

144) intB in NC_022000


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  294 bits (1101),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 178/363 (50%), Positives = 250/363 (69%), Gaps = 0/363 (0%)

Query  2    VKSNGSKLWSFRYIRPLTKKRAKKSLGAYPAVSLAEARSYRLEARTLLAKQIDPQDHQKE  61
            V+++ S+ W FRY RP   K +  S+G+YP +SLAEAR   LEAR  LA  IDPQ  + E
Sbjct  32   VRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMSLAEAREKALEARKQLADGIDPQLAKEE  91

Query  62   QIRNTLEAKKNTFQLVAERWWEVKKSTVTEDYGKDIWRSLERDVFPAIGDISVIDIKAHI  121
            Q  +T+  ++ TF++VAE+W   K + + E    + WR LE   FP +G I+V  + A +
Sbjct  92   QKAKTITEQNATFKFVAEQWKATKEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPM  151

Query  122  LVKAIQPVQARGALETARRLCQRINEVMIYAQNTGLIDAVPSINIGKAFEKPKKNNMPSI  181
             + A++P++++G LET +R  Q +NE+M YA N+G+I+A P   I   F K K  +M ++
Sbjct  152  AIAALRPIESQGLLETVKRTAQLMNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKAL  211

Query  182  PPDQLPKLMQTMRTASISLSTRCLFMWQLLTISRPAEAAEARWDEINFETKEWKIPAARM  241
             P+++  L++T+ TA+I   TR L+ WQL T+ RP EA+ ARW+EI+   K W IP  RM
Sbjct  212  QPHEMHDLIRTVATANIQHVTRFLIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERM  271

Query  242  KMNREHTVPLSNATLAILELMKPFSGNREFIFPSRIKPTQPMNSQTVNAALKRAGFGGVL  301
            KMNREH VPL+  TLAILE +KP+SG+REFIFPS  +P  P +S+T N AL R GF +  
Sbjct  272  KMNREHVVPLTAQTLAILEAIKPISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRT  331

Query  302  VSHGLRSIASTALNEQGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFIE  361
             +HGLR++AST+LNEQGF PDVIEAALAH DKN++R+AYNR+DYL+ RR +M WW++ IE
Sbjct  332  TAHGLRALASTTLNEQGFEPDVIEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

Query  362  TAD  364
             + 
Sbjct  392  KSS  394

145) A3UG_17330 in NC_018079


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  294 bits (1101),  Expect = 8e-81, Method: Compositional matrix adjust.
 Identities = 178/389 (46%), Positives = 273/389 (71%), Gaps = 0/389 (0%)

Query  8    DKPLSVKEIESAKPKGADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKCAKKSIGPYP  67
             + L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP   K +  S+G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  68   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKAGVTE  127
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  128  DYADDIWRSLERDVFPAIGDISVTDIKAHTLVQAIQPVQARGALETVRRLCQRINEVMIY  187
               ++ WR LE   FP +G I+V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  188  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISLSTRCLFMWQLL  247
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  248  TITRPaeaaearweeVDIEAREWKIPAARMKMNRDHTVPLSDEAIAVLEMMEPLSGNREF  307
            T+ RP EA+ ARWEE+D+  + W IP  RMKMNR+H VPL+ +++A+LE + P+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  308  IFPSRIKPNQPMNSQTVNASLKRAGFGGMLVSHGLRSIASTALNEQGFPPDVIEAALAHV  367
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  368  DKNEVRRAYNRSDYLEQRRPMMQWWADFI  396
            DKN++R+AYNR+DYL+ RR +M WW++ I
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

146) EJP617_01070 in NC_017445


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  293 bits (1096),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 172/367 (47%), Positives = 255/367 (70%), Gaps = 0/367 (0%)

Query  4    ITRPLTNNEILKAKPREKDFTLHDGDGLFLLVKTTGKKLWRFRYQRPVSGSLTNLSLGSY  63
            ++  LT  +I  AKP++K + L DG+ L++ V+ +  + W+FRY+RP  + +T LS+G+Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PALTLAAARQIRDQHLTTLAQGMDPqqqqelaseqrqFELGSIFSTVAANWFQLKSKSVT  123
            P ++LA AR+   +    LA+G+DPQ  +E    +   E  + F  VA +W   K   + 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  EDYAKDIWRSLDKDVFPAIGSIPVQEIKARTIVEALEPIKARGALETVRRLVQRVNEIMI  183
            E    + WR L+   FP +GSIPV  + A   + AL PI ++G LETV+R  Q +NEIM 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAVNTGLVDANPASGVGMAFEKPKKQNMPTLRPEELPRLMRSLVMSNLSVATRCLIEWQL  243
            YAVN+G+++ANP +G+   F K K  +M +L+P+E+  L+R++  +N+   TR LIEWQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  LTLVRPSEASGARWAEIDLDTKLWTIPAERMKAKREHIVPLSPQALDIIEVMKPVSAHRE  303
             T+VRP+EASGARW EID+  KLW IP ERMK +REH+VPL++Q+L I+E +KP+S+HRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  HVLPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTALNEHCFNADVIEAALAH  363
             ++PS  +PK P +S+TAN AL R+G+ ++  AHGLR++AST+LNE+ F++DVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  CDKNEVR  370
             DKN++R
Sbjct  361  TDKNQIR  367

147) intA in NC_017328


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 180/408 (45%), Positives = 281/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKTRAKKSIGPYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP     +  S+G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G ++V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLSQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPaeaaearweeVDIEAQEWKIPAARMKMNRDHTVPLSDEAIAVLEMMKPLSGNREF  304
            T+ RP EA+ ARWEE+D+  + W IP  RMKMNR+H VPL+ +++A+LE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDAIEAALAHV  364
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PD IEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWANFVMAADRGSMIEGGIKGMKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS   +G   + L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

148) S2859 in NC_004741


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 180/408 (45%), Positives = 281/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKTRAKKSIGPYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP     +  S+G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G ++V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLSQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPaeaaearweeVDIEAQEWKIPAARMKMNRDHTVPLSDEAIAVLEMMKPLSGNREF  304
            T+ RP EA+ ARWEE+D+  + W IP  RMKMNR+H VPL+ +++A+LE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDAIEAALAHV  364
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PD IEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWANFVMAADRGSMIEGGIKGMKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS   +G   + L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

149) SF2680 in NC_004337


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  292 bits (1092),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 180/408 (45%), Positives = 281/408 (69%), Gaps = 0/408 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKTRAKKSIGPYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP     +  S+G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G ++V+ + A   + A++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLSQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPaeaaearweeVDIEAQEWKIPAARMKMNRDHTVPLSDEAIAVLEMMKPLSGNREF  304
            T+ RP EA+ ARWEE+D+  + W IP  RMKMNR+H VPL+ +++A+LE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDAIEAALAHV  364
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PD IEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWANFVMAADRGSMIEGGIKGMKLV  412
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS   +G   + L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

150) KOX_00140 in NC_016612


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  290 bits (1084),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 176/389 (46%), Positives = 274/389 (71%), Gaps = 0/389 (0%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGPYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP   K +  S+G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQTVQPVQARGALETVRRLCQRINEVMIY  184
               E+ WR LE   FP +G ++V+ + A   + +++P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  185  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLL  244
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  245  TITRPaeaaearweeVDMEAREWKIPAARMKMNRDHTVPLSDEAIAILEMMKPLSGNREF  304
            T+ RP EA+ ARWEE+DM  + W IP  RMKMNR+H VPL+ +++AILE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  305  IFSSRIKPTQPMNSQTVNAALKRAGLGGILVSHGLRSIASTALNEEGLLPDVIEAALAHV  364
            IF+S  +P  P +S+T N AL R G+ +   +HGLR++AST+LNE+G+ PDVIEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  365  DKNEVRRAYNRSDYLEQRRSMMQWWADFV  393
            DKN++R+AYNR+DYL+ RR +M WW++ +
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

151) SBOV27691 in NC_022241


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  287 bits (1073),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 167/336 (50%), Positives = 236/336 (71%), Gaps = 0/336 (0%)

Query  2    MGLGAFPALSLADARGLRADYLALLANGIDPQIQTEVAEEQQQIALDSIFSTVAANWFQL  61
            +++G++P +SLA+AR    +    LA+GIDPQ+  E    +     ++ F  VA +W   
Sbjct  55   LSFGTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKAT  114

Query  62   KSKSVTPDYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKARGALETVRRLVQR  121
            K   +      + WR LE   FP +G IPV ++ A   + AL PI ++G LETV+R  Q 
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  122  INEIMIYAVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVSTRC  181
            +NEIM YAVN+G+I+ANP +G+   F K K  +M +L+P+E+  L+R++  +N+   TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  182  LIEWQLLTLVRPSEASGARWAEIDLDAKLWTIPAERMKAKREHIVPLSTQALEILEVMKP  241
            LIEWQL T+VRP+EASGARW EID+  KLW IP ERMK +REH+VPL++Q+L ILE +KP
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  242  ISAHREHVFPSRNDPKQSMNSQTANAALKRIGYGGKLVAHGLRSIASTTLNEAGFNADVI  301
            IS+HRE +FPS  +PK + +S+TAN AL R+G+ ++  AHGLR++ASTTLNE GF++DVI
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVI  354

Query  302  EAALAHTDKNEVRRAYNRSIYLKQRIGMMEWWGEKV  337
            EAALAHTDKN++R+AYNR+ YL  R  +M WW+E +
Sbjct  355  EAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

152) Dd703_3223 in NC_012880


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  285 bits (1066),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 173/397 (44%), Positives = 272/397 (69%), Gaps = 0/397 (0%)

Query  4    LTKPLTDTEIKAAKPQEADYTLHDGDGLQLLIKSSGRKVWQMRYYRPLTKKRVKLTFGPY  63
            +++ LT  +I++AKP++  Y L DG+ L + +++S  + WQ RY RP   K   L+FG Y
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PEVTladarqrrtaarallVKDIDPYEHQLSLRKQALETQSNTFKVVAERWLQLKKSSVT  123
            P+++LA+AR++   AR  L  +IDP   +   + +++  Q+ TFK VAE+W   K + + 
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIK  120

Query  124  ADYASDIRRSLEKDIFPAIGDISITDIKARTLVQAIQPVQARGALETVRRLCQRINEVMI  183
                 + +R LE   FP +G I+++ + A   + A++P++++G LETV+R  Q +NE+M 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  184  YAMNVGLIDAAPSVNISKAFEKPQKKHMPSIRPDQLPQLMQTMRLANIELPTCCLFMWQL  243
            YA+N G+I+A P   I   F K +  HM +++P+++ +L++T+  ANI+  T  L+ WQL
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  244  LTLTRPVEAAETRWQEIDLDAKEWRIPAERMKMKRVHIVPLSEQALAILELMRPLSSHRE  303
             T+ RP EA+ +RW+EID+  K W IP ERMKM+R H+VPL+ Q+LAILE ++P+S+HRE
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  304  YVFPSRIKPLQPMNSQTVNAALKRAGLGGILVSHGMRSIASTALNEQGFPPDVIEAALAH  363
            ++FPS  +P  P +S+T N AL R G+ +   +HG+R++AST+LNEQGF PDVIEAALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  364  VDKNEVRRAYNRSDYLEQRRPMMQWWADFVKAADNGS  400
             DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS  397

153) M636_03025 in NC_021822


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  284 bits (1063),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 171/398 (43%), Positives = 268/398 (68%), Gaps = 8/398 (2%)

Query  1    MAKRVTDVTIKNLDVRNKEYTFTVEENLQLRVRPKRSIKGSGTKAWQFKYRHPVTKKVTK  60
            MA+ +T   I+    ++K Y ++   NL + VRP      S +++WQF+Y++P   K+T 
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP------SNSRSWQFRYKRPGQDKITY  54

Query  61   ISMGTYPSLGLATAKMEAADYRKQLATGIDPKQAKEESRIENLRAHNDSFLAISIEWFEK  120
            +S GTYP ++LA A+  A + RKQLA GIDP+ AKEE +   +  +N +F  ++ +W   
Sbjct  55   LSFGTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKAT  114

Query  121  KSKTVSEFHAKRIWRSLEKYVFEHIGSLPVKNITRRIAVDILRPLEKAGKLSTIKRICQS  180
            K   + E      WR LE Y F  +GS+PV ++T  +A+  LRP+E  G L T+KR  Q 
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  181  LNQIMEYAVANDSIAANPLTKMINAFERHKVEHMPTIRPellnellsrlsnnDKIQNKTK  240
            +N+IM+YAV ++ I ANPL+ + + F +HKV HM +++P+ +++L+  ++  + IQ+ T+
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATAN-IQHVTR  233

Query  241  LLLLWQLHTIARPKEAARTRWEDIDFDKCCWTIPAKEMKRKREHRIPLTSQALLILEELK  300
            +L+ WQLHT+ RP+EA+ +RWE+ID  +  W IP   MK +REH +PLT+Q+L ILE +K
Sbjct  234  FLIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIK  293

Query  301  PYSSHKEFVFPGERNPDSHASVYTANAALKRSLSFKGELVAHGLRAIASTALHEHGFNTL  360
            P S+H+EF+FP+ RNP   +   TAN AL R ++FK+   AHGLRA+AST+L+E+GF+  
Sbjct  294  PISGHREFIFPSSRNPKVPTDSETANKALGR-MGFKDRTTAHGLRALASTTLNEQGFEPD  352

Query  361  HIEACLSHSDQNETRASYNRSDFFEQRKEIMRWWSEYV  398
             IEA L+H+D+N+ R +YNR+D+++ R+ +M WWSE +
Sbjct  353  VIEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

154) intA in NC_008258


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  283 bits (1060),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 179/408 (44%), Positives = 277/408 (68%), Gaps = 6/408 (1%)

Query  5    TKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKTRAKKSIGPYP  64
            ++ L+ ++I++AKPK+  Y L DG+ L + +++S S+ WQFRY RP     +  S+G YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   SVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTE  124
             ++LA+AR+   E+R  LA  IDPQ  ++EQ   ++  +  TF++VAE+W   K + + E
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKE  121

Query  125  DYAEDIWRSLERDVFPAIGDVSVTDIKAHT------PVQARGALETVRRLCQRINEVMIY  178
               E+ WR LE   FP +G ++V+ + A        P++++G LETV+R  Q +NE+M Y
Sbjct  122  KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNY  181

Query  179  AQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLSQLMQTMRTASISLSTRCLFMWQLL  238
            A N+G+I+A P   I   F K +  +M +++P+++ +L++T+ TA+I   TR L+ WQL 
Sbjct  182  AVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLH  241

Query  239  TITRPaeaaearweeVDIEAQEWKIPAARMKMNRDHTVPLSDEAIAVLEMMKPLSGNREF  298
            T+ RP EA+ ARWEE+D+  + W IP  RMKMNR+H VPL+ +++A+LE +KP+SG+REF
Sbjct  242  TMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREF  301

Query  299  IFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQGFPPDAIEAALAHV  358
            IFPS  +P+ P +S+T N +L R GF +   +HGLR++AST+LNEQGF PD IEAALAH 
Sbjct  302  IFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHT  361

Query  359  DKNEVRRAYNRSDYLEQRRPMMQWWANFVMAADRGSMIEGGIKGMKLV  406
            DKN++R+AYNR+DYL+ RR +M WW++ +  +  GS   +G   + L+
Sbjct  362  DKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL  409

155) HS_1425 in NC_008309


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  280 bits (1046),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 169/409 (42%), Positives = 276/409 (68%), Gaps = 3/409 (0%)

Query  7    QLTNTKILNAKPKDKDYTLSDGQGLYLLVKSNGSKLWRFNYYDL-LKKRKLISLGSYPET  65
            +LT  +I  AKPKDK Y LSDG  LY+ V+++ S+ W+F Y      K   +S+G+YP+ 
Sbjct  4    NLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDM  63

Query  66   SLLDARTKRDEYRALLAKDIEPQDYIFKQKEQAIFNQCNTLIGVAKDWREMKSSKVEADT  125
            SL +AR K  E R  LA +I+PQ     QK ++I +Q  T+  VA +W+  K +++   T
Sbjct  64   SLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKT  123

Query  126  MKDQWRLLELHLFPHLGNMPISDITAPFTRMKLQKLADDKKFEMLKKVIRGLNEIMRFAV  185
            + ++WR LEL  FP LG++P+S +TAP +   L+ +  +  +E +K+  + +NEIM +AV
Sbjct  124  LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV  183

Query  186  NAGLIQFNPTANLQELFPSGEVQHRPSIHPDKLPKFLESVNKANIQLQTRCLLEWQLLTM  245
            N+G+I+ NP A ++++F    V H  +++P+ +  ++ +V  ANIQ  TR L+EWQL TM
Sbjct  184  NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM  243

Query  246  VRPSEAAGTMWREIDFENKTWLIPKDRMKGKKRSHLVPLSQQAINILNIMRPITGNCDFV  305
            VRP+EA+G+ W EID  NK W+IPK+RMK  +R H+VPL+ Q++ IL+ ++PI+G+ +F+
Sbjct  244  VRPNEASGARWEEIDMVNKLWIIPKERMK-MNREHVVPLTAQTLAILEAIKPISGHREFI  302

Query  306  FPKNGDLTTNMSSETINKALRKMGYQGILCAHGFRSIASTALNENEFNVEIIEALLSHVK  365
            FP + +      SET NKAL +MG+++   AHG+R++AST+LNE+ F+ ++IEA L+H  
Sbjct  303  FPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTD  362

Query  366  GDKVRTAYDRSTYEKQKRQYIEWWGNFVEKSSVRPCLLGAGG-LDLLNP  413
             +++R AY+R+ Y   +R+ + WW++ +EKSS  +  +++ G L+LL++
Sbjct  363  KNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLLKA  411

156) PAU_01267 in NC_012962


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  277 bits (1035),  Expect = 9e-76, Method: Compositional matrix adjust.
 Identities = 161/333 (49%), Positives = 234/333 (71%), Gaps = 0/333 (0%)

Query  2    MGLGAFPALSLADARGLRADYLSLLANGTDPqvqaevveeqRQIALDSIFSTVAANWFQL  61
            +++G++P +SLA+AR    +    LA+G DPQ+  E    +     ++ F  VA +W   
Sbjct  55   LSFGTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKAT  114

Query  62   KSKSVTPDYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKARGALETVRRLVQR  121
            K   +      + WR LE   FP +G IPV ++ A   + AL PI ++G LETV+R  Q 
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  122  INEIMIYAVNTGLIDVNPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRC  181
            +NEIM YAVN+G+I+ NP +G+   F K K  +M +L+P+E+  L+R++  +N+   TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  182  LIEWKLLTLVRPSEASGARWAEIDLDAKLWTIPAERMKAKREHIVPLSPQALEILDVMKP  241
            LIEW+L T+VRP+EASGARW EID+  KLW IP ERMK +REH+VPL++Q+L IL+ +KP
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  242  ISAHREHVFPSRNDPKQAMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGLNPDVI  301
            IS+HRE +FPS  +PK + +S+TAN AL R+G+ ++  AHGLR++AST++NE G++PDVI
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVI  354

Query  302  EAALAHSDKNEVRKAYNRSTYLTQRKDLMNWWG  334
            EAALAH+DKN++RKAYNR+ YL  R+ LM+WW+
Sbjct  355  EAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWS  387

157) VEJY3_05015 in NC_016613


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  267 bits (999),  Expect = 8e-73, Method: Compositional matrix adjust.
 Identities = 159/393 (41%), Positives = 266/393 (68%), Gaps = 4/393 (1%)

Query  1    MKTKLTTKFVENAKVTNGKPFQRFTDGNGLSLVVRASGTKAWEFRFRKP-DGRDSNLGLG  59
            M  +LT++ ++ AK  ++K + R++DG  L + VR+S +++W+FR+++P +++ + L++G
Sbjct  1    MANNLTARQIQTAK-PKDKLY-RLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFG  58

Query  60   RYPEITLSEARKKVAEFRKLRAQGLDPSVVQRNRKVELKRSASNTVKQIGEMWLEKAATR  119
             YP+++L+EAR K  E RK  A+G+DP + + ++K       + T K ++E W      +
Sbjct  59   TYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQ  118

Query  120  VVHKTAEGYRQKLNKHIYPKLGSIPVSEIKAAMLIDAMRPLEKKGKLETVTRTIALFRRL  179
            + +KT EG ++KL+   +PKLGSIPVS + A+M I A+RP+E +G LETV RT  L   +
Sbjct  119  IKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEI  178

Query  180  MNYAVNNEYIDHNPIGSMADVFEKPKRGNFACIDISELPDLLTMVVQSTMRPANKLLFEF  239
            MNYAVN+  I+ NP++++ DVF K K  +   ++  E+ DL+  V  + ++   ++L+E 
Sbjct  179  MNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEW  238

Query  240  QLHTLTRSKEATGTRWEEISFEEQIWYLPAERAKNRLMHKIPLTPEVIAILKAAKHLCRG  299
            QLHT+ R++EA+G+RWEEI   +++W +P ER K    H +PLT++ +AIL A K +   
Sbjct  239  QLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGH  298

Query  300  SEYVFPSRNSLRKPVHSETVNAAFKRMGLGGKMTSHGTRSLGSTTLYERTDFESVVIEAL  359
             E++FPS  + + P +SET N A+ RMG+ ++ T+HG R+L+STTL E+ +FE+ VIEA 
Sbjct  299  REFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQ-GFEPDVIEAA  357

Query  360  LSHTDRDGIRDAYNRNKFFQKRKRALEWWSKHV  392
            L+HTD++ IR AYNR  +++ R++ + WWS H+
Sbjct  358  LAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

158) UMN179_00183 in NC_015460


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  259 bits (967),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 174/402 (44%), Positives = 256/402 (64%), Gaps = 12/402 (2%)

Query  4    IVKQLTNTKITNAKPKDKDYTLTDGRGLYLLVKPNGLKVWRFRYKRPYTKKPALLTLGRF  63
            + ++LT  +I  AKPKDK Y L+DG  LY+ V+P+  + W+FRYKRP   K + L++G +
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTY  60

Query  64   PETTLQYARQQRDQYLSLLAQQIDPQ--QHEKQIKQLEQQRITNTFKNVAESWKNSKAKS  121
            P+ +L  AR++  +    LA+ IDPQ  ++E++ K + +Q    TFK VAE WK +K   
Sbjct  61   PDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQ--NATFKFVAEQWKATKEGQ  118

Query  122  IKPLTLSKYWRIIELYLMPTLGNYPIDEIKPILAKTALEVPYKQGKAEMYRKSVKLLNAI  181
            IK  TL   WR +ELY  P LG+ P+  + + +A +AL     QG  E  +++ +L+N I
Sbjct  119  IKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEI  178

Query  182  LNYAVYSLFLIPVNPCEKISTAFEPLGRGKNPNIKPDELPTFLDKLENSNIDLLTKYLIQ  241
            +NYAV S  +I  NP   I   F          ++P+E+  ++  +  +NI+ +T++LI+
Sbjct  179  MNYAVNSG-VIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIE  237

Query  242  WQLLTMVRPNEAVTAEWTEIDFSKKLWTIPAEKMKQTKANQNKAHLVPLSTQALSLLERI  301
            WQL TMVRPNEA  A W EID  +KLW IP E+MK      N+ H+VPL++Q+L++LE I
Sbjct  238  WQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMK-----MNREHVVPLTAQTLAILEAI  292

Query  302  KTISANSPFLFPSHRTKTKHLNSQTANKAIRDNMGYKDKQTAHGLRKIASTYLHEIGIMP  361
            K IS++  F+FPS R      +S+TANKA+ + MG+KD+ TAHGLR +AST L+E G+ P
Sbjct  293  KPISGHREFIFPSSRNPKVPTDSETANKAL-GRMGFKDRTTAHGLRALASTTLNEQGFEP  351

Query  362  DVVEACLAHTIKG-IRGVYNEADYLPHRKKALQKWGDYINKC  402
            DV+EA LAHT K  IR  YN +DYL  R+K +  W++ I+K 
Sbjct  352  DVIEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

159) intA in NC_009648


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  255 bits (953),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 160/393 (41%), Positives = 245/393 (63%), Gaps = 3/393 (0%)

Query  6    KSLTNTEIAAAKPQKTEYMLRDGDGLALLIKPSGRKIWYFEYAPPALKKRTKISIGPYPV  65
            ++LT  +I +AKP+   Y L DG+ L + ++PS  + W F Y  P+  K T +S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARDFRLQYRRLLVQGIDPQAHLEQVAEEQRLQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA AR+  L+ R+ L +GIDPQ   E+       +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTLLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LG+ PV+ + + M    L  +E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL+P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSIARTAGAGH-FPREVLESALAH  364
             +FPS R+P    + +TAN AL RMGF +   AHG+R++A T+   + F  +V+E+ALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  QKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAA  397
               ++I  AYNR+DYL+ RR LM WW++ ++ +
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKS  393

160) ECUMN_2945 in NC_011751


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  254 bits (948),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 161/391 (42%), Positives = 238/391 (61%), Gaps = 3/391 (0%)

Query  6    KPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPV  65
            + LT  +I  AKP+   Y L DG  LY+ V+ S  ++W+F Y +P   K T  S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARETRTKYRRLLWQGIDPRQHLAGIAEEKRLQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA ARE     R+ L +GIDP+            +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGSTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LGS PV+ + + M    L P+E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALPPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSIARTAGAGH-FPREVLESALAH  364
             +FPS R+P    + +TAN AL RMGF +   AHG+R++A T+   + F  +V+E+ALAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  365  QKEDEIEAAYNRSDYLEQRRPLMQWWGNYVD  395
               ++I  AYNR+DYL+ RR LM WW++ ++
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

161) SARI_00233 in NC_010067


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  251 bits (937),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 162/397 (41%), Positives = 251/397 (64%), Gaps = 6/397 (1%)

Query  18   IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSL  77
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  78   GTYPHLTLARARALRDEYLSLLANGIDPQVHNNDKANALKNATEHTLQTVARKWLDEKVK  137
            GTYP+++LA AR    E    LA+GIDPQ+ ++++        + T++ VA +W     K
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATK  115

Query  138  TSGISQDHAEDIWRSLERNIFPGLGNVPVNEIRPKLLKQHLDPIEQRGVLETLRRIISRL  197
             + I +   E+ WR LE   FP LG++PV+ + + +    L PIE +G+LET++R    +
Sbjct  116  EGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLM  175

Query  198  NEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRLL  257
            NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++  A+I+  TR+L
Sbjct  176  NEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFL  235

Query  258  IEWQLLTWVRPGEAVCTRWTDIDTDNSMWNIPAEFMKMKKPHKVPLSKEALRVLNSMKAI  317
            IEWQL T VRP EA  +RW +ID  N +W IP E MKM++ H VPL+ ++L +L+++K+I
Sbjct  236  IEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPI  295

Query  318  SGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTEVL  377
            SGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  +V+
Sbjct  296  SGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVI  354

Query  378  EAALAHSKKDEIIAAYNRAEYLTERVALMQWWSDYVQ  414
            EAALAH+ K++I  AYNR++YL  R  LM WWS+ ++
Sbjct  355  EAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

162) K756_02865 in NC_021521


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  249 bits (929),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 164/405 (41%), Positives = 269/405 (67%), Gaps = 18/405 (4%)

Query  5    TKPLTNTEIANAKPKDKKYPLTDGGGLFLLVKPNGAKLWRFNYYKPYTKNRTEIGLGSYP  64
            ++ LT  +I  AKPKDK Y L+DGG L++ V+P+ ++ W+F Y +P   + T +++G+YP
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYP  61

Query  65   DVNLARAREIREEYRSLLSQNIDPHTHRQAIEQAKQTEIYNTFENVAWAWYEWRQTRANF  124
            D++LA ARE   E R  L++ IDP+  ++       TE   TF  VA    +W+ T+   
Sbjct  62   DMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVA---EQWKATK---  115

Query  125  SQGYARDVKSLIE--RIL----LPAFGKYPITQISAPMALKAFKPLQEKGTLETLKRAIQ  178
             +G  ++ K+L    R L    +P +G  P+++++APMA+ A++P++ +G LET+KR+ Q
Sbjct  116  -EGQIKE-KTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQ  173

Query  179  KMNEIMTFALHREIIQHNPLINISKEFDSPTVEHFKTIKPEDLSEFLFTLNTAQIQLQTR  238
             MNEIM +A++  +I+ NPL  I   F    V H K+++P+++ +++ T+ TA+IQ  TR
Sbjct  174  LMNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTR  233

Query  239  YLILWQLLTMTRPNEAATAKYEDIDEKEKIWTIYINKGIKQDDKGREHKITLSRQALALL  298
            +LI WQL TM RPNEA+ A+ E+ID  +K+W I       +    REH + L+ Q+LA+L
Sbjct  234  FLIEWQLHTMVRPNEASGARWEEIDMVNKLWII----PKERMKMNREHVVPLTAQTLAIL  289

Query  299  REIKKFSGGKVYLFPSHKNPqthtntqtanaaIKRMGYKGKLVAHGLRSIASTYLNEKGY  358
              IK +SG + ++FPS +NP+  T+++TAN A+ RMG+K++  AHGLR++AST LNE+G+
Sbjct  290  EAIKPISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGF  349

Query  359  NPELIEVALSHINQDRIRMAYNRADYIKQRFEILQAWADFIDECS  403
            +P++IE AL+H ++++IR AYNR+DY+  R  ++  W++ I+  S
Sbjct  350  EPDVIEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSS  394

163) ETEC_2827 in NC_017633


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  248 bits (926),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 160/397 (41%), Positives = 250/397 (63%), Gaps = 6/397 (1%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVTKKRTKVSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSLLANGIDPQIHNNDKANALKNATEHTLQAVARKWLDEKVK  123
            GTYP+++LA AR    E    LA+GIDPQ+ ++++        + T++ VA +W     K
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATK  115

Query  124  TSGISQDHAEDIWRSLERNIFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISRL  183
             + I +   E+ WR LE   FP LG++P++ + + +    L PIE +G+LET++R    +
Sbjct  116  EGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLM  175

Query  184  NEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLLVLNNASVRLETRLL  243
            NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++  +  A+++  TR+L
Sbjct  176  NEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFL  235

Query  244  IEWQLLTWVRPGEAVRTRWTDIDTDNSMWNIPAEFMKMKKPHKVPLSKEALRVLDSMKAI  303
            IEWQL T VRP EA  +RW +ID  N +W IP E MKM++ H VPL+ ++L +L+++K+I
Sbjct  236  IEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPI  295

Query  304  SGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTEVL  363
            SGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  +V+
Sbjct  296  SGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVI  354

Query  364  EAALAHSKKDEIIAAYNRAEYLAERVVLMQWWSNYVQ  400
            EAALAH+ K++I  AYNR++YL  R  LM WWS+ ++
Sbjct  355  EAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

164) intA in NC_016514


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  248 bits (925),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 163/397 (42%), Positives = 249/397 (63%), Gaps = 8/397 (2%)

Query  31   IAKKLTDTEIKSTKPAEKEVNLFDGDGLLLRIAPLSKGGKKNWYFRYAVPVTKKRTKVSL  90
            +A++LT  +I+++KP +K   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  91   GTYPHLTLAKARALRDEYLSLLANGIDPQV-HNTQKANALKDATEHTFQAVAKKWLDEKV  149
            GTYP+++LA AR    E    LA+GIDPQ+  + QKA+++ +    TF+ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQW--KAT  114

Query  150  KTSGISQDHANDIWRSLERNIFPTLGDTPIKEIRPKMLKQHLDPIEKRGVLETLRRIISR  209
            K + I +   ++ WR LE   FP LG  P+  + + M    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  210  LNEIFRYAATEELIEFNPADNLAQRFSKPKKQNMPALPPTELPRFLTVLNNASVRMETRL  269
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++  +  A+++  TR+
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  270  LIEWQLLTWVRPGEAVRTRWADIDTDNSMWNIPAEFMKMKKPHKVPLSKEALRVLDSMKA  329
            LIEWQL T VRP EA  +RW +ID  N +W IP E MKM++ H VPL+ ++L +L+++K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  330  ISGRREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDV  389
            ISG+RE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  DV
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  390  LEAALAHSKKDEIIAAYNRAEYLTERVVLMQWWSDYV  426
            +EAALAH+ K++I  AYNR++YL  R  LM WWS+ +
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

165) P12B_c2755 in NC_017663


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  248 bits (925),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 161/397 (41%), Positives = 251/397 (64%), Gaps = 6/397 (1%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSLLANGIDPQVHNNDKANALKNATEHTLQAVARKWLDEKVK  123
            GTYP+++LA AR    E    LA+GIDPQ+ ++++        + T++ VA +W     K
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATK  115

Query  124  TSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKILKQHLDPIEQRGVLETLRRIISRL  183
             + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    +
Sbjct  116  EGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLM  175

Query  184  NEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRML  243
            NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR L
Sbjct  176  NEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFL  235

Query  244  IEWQLLTWVRPGEAVRARWSDIDTTNNIWNIPADFMKMKKPHKVPLSKEALHILELMKSI  303
            IEWQL T VRP EA  ARW +ID  N++W IP + MKM++ H VPL+ ++L ILE +K+I
Sbjct  236  IEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPI  295

Query  304  SGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEVL  363
            SGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V+
Sbjct  296  SGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVI  354

Query  364  EAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  355  EAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

166) APECO78_16820 in NC_020163


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 162/402 (41%), Positives = 249/402 (62%), Gaps = 8/402 (1%)

Query  4    IAKKLTDTEIKSTKPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSL  63
            +A++LT  +I+++KP +K   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLAKARALRDEYLSLLTNGIDPQV-HNNQKANALKDATEHTFQAVAKKWLDEKV  122
            GTYP+++LA AR    E    L++GIDPQ+  ++QKA+++ +    TF+ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQW--KAT  114

Query  123  KTSGISQDHANDIWRSLERNIFSTLGDTPIKEIRPKMLKQHLEPIEKRGVLETLRRIISR  182
            K + I +   ++ WR LE   F+ LG  P+  + + M    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRL  242
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++  A+I+  TR+
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLDLMKV  302
            LIEWQL T VRP EA  +RW +ID+   +W IP E MKM++ H VPL+ ++L +L+ +K 
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  DV
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLTERVVLMQWWSDYVSSQKC  404
            +EAALAH+ K++I  AYNR++YL  R  LM WWS+ +     
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSY  395

167) ECD_02509 in NC_012971


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 162/402 (41%), Positives = 249/402 (62%), Gaps = 8/402 (1%)

Query  4    IAKKLTDTEIKSTKPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSL  63
            +A++LT  +I+++KP +K   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLAKARALRDEYLSLLTNGIDPQV-HNNQKANALKDATEHTFQAVAKKWLDEKV  122
            GTYP+++LA AR    E    L++GIDPQ+  ++QKA+++ +    TF+ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQW--KAT  114

Query  123  KTSGISQDHANDIWRSLERNIFSTLGDTPIKEIRPKMLKQHLEPIEKRGVLETLRRIISR  182
            K + I +   ++ WR LE   F+ LG  P+  + + M    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRL  242
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++  A+I+  TR+
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLDLMKV  302
            LIEWQL T VRP EA  +RW +ID+   +W IP E MKM++ H VPL+ ++L +L+ +K 
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  DV
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLTERVVLMQWWSDYVSSQKC  404
            +EAALAH+ K++I  AYNR++YL  R  LM WWS+ +     
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSY  395

168) ybl113 in NC_012892


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 162/402 (41%), Positives = 249/402 (62%), Gaps = 8/402 (1%)

Query  4    IAKKLTDTEIKSTKPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSL  63
            +A++LT  +I+++KP +K   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLAKARALRDEYLSLLTNGIDPQV-HNNQKANALKDATEHTFQAVAKKWLDEKV  122
            GTYP+++LA AR    E    L++GIDPQ+  ++QKA+++ +    TF+ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQW--KAT  114

Query  123  KTSGISQDHANDIWRSLERNIFSTLGDTPIKEIRPKMLKQHLEPIEKRGVLETLRRIISR  182
            K + I +   ++ WR LE   F+ LG  P+  + + M    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRL  242
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++  A+I+  TR+
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLDLMKV  302
            LIEWQL T VRP EA  +RW +ID+   +W IP E MKM++ H VPL+ ++L +L+ +K 
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  DV
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLTERVVLMQWWSDYVSSQKC  404
            +EAALAH+ K++I  AYNR++YL  R  LM WWS+ +     
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSY  395

169) ECBD_1066 in NC_012947


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 162/402 (41%), Positives = 249/402 (62%), Gaps = 8/402 (1%)

Query  4    IAKKLTDTEIKSTKPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSL  63
            +A++LT  +I+++KP +K   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLAKARALRDEYLSLLTNGIDPQV-HNNQKANALKDATEHTFQAVAKKWLDEKV  122
            GTYP+++LA AR    E    L++GIDPQ+  ++QKA+++ +    TF+ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQW--KAT  114

Query  123  KTSGISQDHANDIWRSLERNIFSTLGDTPIKEIRPKMLKQHLEPIEKRGVLETLRRIISR  182
            K + I +   ++ WR LE   F+ LG  P+  + + M    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRL  242
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++  A+I+  TR+
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLDLMKV  302
            LIEWQL T VRP EA  +RW +ID+   +W IP E MKM++ H VPL+ ++L +L+ +K 
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  DV
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLTERVVLMQWWSDYVSSQKC  404
            +EAALAH+ K++I  AYNR++YL  R  LM WWS+ +     
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSY  395

170) ECB_02509 in NC_012967


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (920),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 162/402 (41%), Positives = 249/402 (62%), Gaps = 8/402 (1%)

Query  4    IAKKLTDTEIKSTKPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSL  63
            +A++LT  +I+++KP +K   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLAKARALRDEYLSLLTNGIDPQV-HNNQKANALKDATEHTFQAVAKKWLDEKV  122
            GTYP+++LA AR    E    L++GIDPQ+  ++QKA+++ +    TF+ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQW--KAT  114

Query  123  KTSGISQDHANDIWRSLERNIFSTLGDTPIKEIRPKMLKQHLEPIEKRGVLETLRRIISR  182
            K + I +   ++ WR LE   F+ LG  P+  + + M    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRL  242
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++  A+I+  TR+
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLDLMKV  302
            LIEWQL T VRP EA  +RW +ID+   +W IP E MKM++ H VPL+ ++L +L+ +K 
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  DV
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLTERVVLMQWWSDYVSSQKC  404
            +EAALAH+ K++I  AYNR++YL  R  LM WWS+ +     
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSY  395

171) EcE24377A_2905 in NC_009801


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (918),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 162/397 (41%), Positives = 249/397 (63%), Gaps = 8/397 (2%)

Query  31   IAKKLTDTEIKSTKPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSL  90
            +A++LT  +I+++KP +K   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  91   GTYPHLTLAKARALRDEYLSLLTNGIDPQV-HNNQKANALKDATEHTFQAVAKKWLDEKV  149
            GTYP+++LA AR    E    L++GIDPQ+  ++QKA+++ +    TF+ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQW--KAT  114

Query  150  KTSGISQDHANDIWRSLERNIFSTLGDTPIKEIRPKMLKQHLEPIEKRGVLETLRRIISR  209
            K + I +   ++ WR LE   F+ LG  P+  + + M    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  210  LNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLVALNNASIRLETRL  269
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++  A+I+  TR+
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  270  LIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLDLMKV  329
            LIEWQL T VRP EA  +RW +ID+   +W IP E MKM++ H VPL+ ++L +L+ +K 
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  330  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDV  389
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  DV
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  390  LEAALAHSKKDEIIAAYNRAEYLTERVVLMQWWSDYV  426
            +EAALAH+ K++I  AYNR++YL  R  LM WWS+ +
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHI  390

172) SeSA_A2892 in NC_011094


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (919),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 161/397 (41%), Positives = 250/397 (63%), Gaps = 6/397 (1%)

Query  18   IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSL  77
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  78   GTYPHLTLARARALRDEYLSLLANGIDPQVHNNDKANALKNATEHTLQAVARKWLDEKVK  137
            GTYP+++LA AR    E    LA+GIDPQ+ ++++        + T++ VA +W     K
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATK  115

Query  138  TSGISQDHAEDIWRSLERNILPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRLISRL  197
             + I +   E+ WR LE   +P LG++P++ + + +    L PIE +G+LET++R    +
Sbjct  116  EGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLM  175

Query  198  NEIFRWAATEELIEFNPADNLSQRFSKPKKQNMPALPPSELPRFLAALNNASVRLETRLL  257
            NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ ++  A+++  TR+L
Sbjct  176  NEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFL  235

Query  258  IEWQLLTWVRPGEAVRARWSDIDMDNSMWNIPAEFMKMKKPHKVPLSKESLRILKSMESI  317
            IEWQL T VRP EA  ARW +IDM N +W IP E MKM++ H VPL+ ++L IL ++ +I
Sbjct  236  IEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPI  295

Query  318  SGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTEVL  377
            SGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  +V+
Sbjct  296  SGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVI  354

Query  378  EAALAHSKKDEIIAAYNRAEYISEREKLMQWWSNYIQ  414
            EAALAH+ K++I  AYNR++Y+  R KLM WWS+ I+
Sbjct  355  EAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

173) F382_05840 in NC_021743


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (917),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 167/398 (42%), Positives = 256/398 (65%), Gaps = 11/398 (2%)

Query  8    LNDTQIRKAKPEDS--PLRDGNGLLLVI-TSNSKLWRFRYERPFTKKRNDLSIGAYPDIS  64
            L   QI+ AKP D    L DG  L + +  SNS+ W+FRY RP   K   LS+G+YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  65   LAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISNTYENVAWAWLEHRKTK---KNF  121
            LA+ARE   E R  LA+ IDPQ  +++Q      E + T+  VA  W   +  +   K +
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  122  SDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQYQDEGKLEKLKRAIQKHNEIM  181
             +N +K  + L     +P +G +P++++TAPMAI A++  + +G LE +KR+ Q  NEIM
Sbjct  125  EGNWRK--LELYA---FPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  182  MFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDLGEFLYTLQNAQIHLQTRYLILWQ  241
             +AV+  +I  NP A I   F    V H K+++P+++ +++ T+  A+I+  TR+LI WQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  242  LLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRGIEHKITLSRQAIALLREIKKLSGGK  301
            L TM RPNEA+ A+W +ID   KLW IP E MK   EH + L+ Q++A+L  IK +SG +
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  302  TYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLVAHGLRAIASTYLNEKGYNSDLIEVALS  361
             ++FPS +NP+   +++TAN A+ RMG+K++  AHGLRA+AST LNE+G+++D+IE AL+
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  362  HLNSDRIKAAYDRGERLEQRFKLLQVWADFVEECSQGS  399
            H + ++I+ AY+R + L+ R KL+  W++ +E  S GS
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS  397

174) J451_06080 in NC_021739


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (917),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 167/398 (42%), Positives = 256/398 (65%), Gaps = 11/398 (2%)

Query  8    LNDTQIRKAKPEDS--PLRDGNGLLLVI-TSNSKLWRFRYERPFTKKRNDLSIGAYPDIS  64
            L   QI+ AKP D    L DG  L + +  SNS+ W+FRY RP   K   LS+G+YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  65   LAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISNTYENVAWAWLEHRKTK---KNF  121
            LA+ARE   E R  LA+ IDPQ  +++Q      E + T+  VA  W   +  +   K +
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  122  SDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQYQDEGKLEKLKRAIQKHNEIM  181
             +N +K  + L     +P +G +P++++TAPMAI A++  + +G LE +KR+ Q  NEIM
Sbjct  125  EGNWRK--LELYA---FPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  182  MFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDLGEFLYTLQNAQIHLQTRYLILWQ  241
             +AV+  +I  NP A I   F    V H K+++P+++ +++ T+  A+I+  TR+LI WQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  242  LLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRGIEHKITLSRQAIALLREIKKLSGGK  301
            L TM RPNEA+ A+W +ID   KLW IP E MK   EH + L+ Q++A+L  IK +SG +
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  302  TYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLVAHGLRAIASTYLNEKGYNSDLIEVALS  361
             ++FPS +NP+   +++TAN A+ RMG+K++  AHGLRA+AST LNE+G+++D+IE AL+
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  362  HLNSDRIKAAYDRGERLEQRFKLLQVWADFVEECSQGS  399
            H + ++I+ AY+R + L+ R KL+  W++ +E  S GS
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS  397

175) intA1 in NC_021082


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (917),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 167/398 (42%), Positives = 256/398 (65%), Gaps = 11/398 (2%)

Query  8    LNDTQIRKAKPEDS--PLRDGNGLLLVI-TSNSKLWRFRYERPFTKKRNDLSIGAYPDIS  64
            L   QI+ AKP D    L DG  L + +  SNS+ W+FRY RP   K   LS+G+YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  65   LAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISNTYENVAWAWLEHRKTK---KNF  121
            LA+ARE   E R  LA+ IDPQ  +++Q      E + T+  VA  W   +  +   K +
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  122  SDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQYQDEGKLEKLKRAIQKHNEIM  181
             +N +K  + L     +P +G +P++++TAPMAI A++  + +G LE +KR+ Q  NEIM
Sbjct  125  EGNWRK--LELYA---FPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  182  MFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDLGEFLYTLQNAQIHLQTRYLILWQ  241
             +AV+  +I  NP A I   F    V H K+++P+++ +++ T+  A+I+  TR+LI WQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  242  LLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRGIEHKITLSRQAIALLREIKKLSGGK  301
            L TM RPNEA+ A+W +ID   KLW IP E MK   EH + L+ Q++A+L  IK +SG +
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  302  TYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLVAHGLRAIASTYLNEKGYNSDLIEVALS  361
             ++FPS +NP+   +++TAN A+ RMG+K++  AHGLRA+AST LNE+G+++D+IE AL+
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  362  HLNSDRIKAAYDRGERLEQRFKLLQVWADFVEECSQGS  399
            H + ++I+ AY+R + L+ R KL+  W++ +E  S GS
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS  397

176) D650_4460 in NC_020833


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (917),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 167/398 (42%), Positives = 256/398 (65%), Gaps = 11/398 (2%)

Query  8    LNDTQIRKAKPEDS--PLRDGNGLLLVI-TSNSKLWRFRYERPFTKKRNDLSIGAYPDIS  64
            L   QI+ AKP D    L DG  L + +  SNS+ W+FRY RP   K   LS+G+YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  65   LAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISNTYENVAWAWLEHRKTK---KNF  121
            LA+ARE   E R  LA+ IDPQ  +++Q      E + T+  VA  W   +  +   K +
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  122  SDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQYQDEGKLEKLKRAIQKHNEIM  181
             +N +K  + L     +P +G +P++++TAPMAI A++  + +G LE +KR+ Q  NEIM
Sbjct  125  EGNWRK--LELYA---FPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  182  MFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDLGEFLYTLQNAQIHLQTRYLILWQ  241
             +AV+  +I  NP A I   F    V H K+++P+++ +++ T+  A+I+  TR+LI WQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  242  LLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRGIEHKITLSRQAIALLREIKKLSGGK  301
            L TM RPNEA+ A+W +ID   KLW IP E MK   EH + L+ Q++A+L  IK +SG +
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  302  TYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLVAHGLRAIASTYLNEKGYNSDLIEVALS  361
             ++FPS +NP+   +++TAN A+ RMG+K++  AHGLRA+AST LNE+G+++D+IE AL+
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  362  HLNSDRIKAAYDRGERLEQRFKLLQVWADFVEECSQGS  399
            H + ++I+ AY+R + L+ R KL+  W++ +E  S GS
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS  397

177) N220_11990 in NC_021883


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  246 bits (917),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 167/398 (42%), Positives = 256/398 (65%), Gaps = 11/398 (2%)

Query  8    LNDTQIRKAKPEDS--PLRDGNGLLLVI-TSNSKLWRFRYERPFTKKRNDLSIGAYPDIS  64
            L   QI+ AKP D    L DG  L + +  SNS+ W+FRY RP   K   LS+G+YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  65   LAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISNTYENVAWAWLEHRKTK---KNF  121
            LA+ARE   E R  LA+ IDPQ  +++Q      E + T+  VA  W   +  +   K +
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  122  SDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQYQDEGKLEKLKRAIQKHNEIM  181
             +N +K  + L     +P +G +P++++TAPMAI A++  + +G LE +KR+ Q  NEIM
Sbjct  125  EGNWRK--LELYA---FPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  182  MFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDLGEFLYTLQNAQIHLQTRYLILWQ  241
             +AV+  +I  NP A I   F    V H K+++P+++ +++ T+  A+I+  TR+LI WQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  242  LLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRGIEHKITLSRQAIALLREIKKLSGGK  301
            L TM RPNEA+ A+W +ID   KLW IP E MK   EH + L+ Q++A+L  IK +SG +
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  302  TYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLVAHGLRAIASTYLNEKGYNSDLIEVALS  361
             ++FPS +NP+   +++TAN A+ RMG+K++  AHGLRA+AST LNE+G+++D+IE AL+
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  362  HLNSDRIKAAYDRGERLEQRFKLLQVWADFVEECSQGS  399
            H + ++I+ AY+R + L+ R KL+  W++ +E  S GS
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGS  397

178) KO11_09745 in NC_017660


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (914),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 255/398 (65%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKLHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

179) EKO11_1119 in NC_016902


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (914),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 255/398 (65%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKLHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

180) ECO103_3195 in NC_013353


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (914),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 255/398 (65%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKLHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

181) ECO26_3720 in NC_013361


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (914),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 255/398 (65%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKLHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

182) ECSE_2904 in NC_011415


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (914),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 255/398 (65%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKLHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

183) ECW_m2849 in NC_017635


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (914),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 255/398 (65%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKLHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

184) WFL_13920 in NC_017664


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (914),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 255/398 (65%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKLHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

185) LY180_13435 in NC_022364


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (914),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 255/398 (65%), Gaps = 8/398 (2%)

Query  18   IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRYAVPVSKKRTKMSL  77
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  78   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  136
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  137  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISR  196
            K + I +    + WR LE   FP LG++P++ + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  197  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  256
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  257  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKLHKVPLSKEALRILELMKS  316
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  317  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  376
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  377  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  414
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

186) intA in NC_013941


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (913),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 162/398 (41%), Positives = 254/398 (64%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIKQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PI  +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKPHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

187) ECO55CA74_15575 in NC_017656


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  245 bits (913),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 162/398 (41%), Positives = 254/398 (64%), Gaps = 8/398 (2%)

Query  4    IAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSFLANGVDPQIHNND-KAKALKSATEHTLQAVARKWLDEKV  122
            GTYP+++LA AR    E    LA+G+DPQ+ +++ KAK++ +  + T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTI-TEQNATFKFVAEQW--KAT  114

Query  123  KTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKLLKQHLDPIKQRGVLETLRRIISR  182
            K + I +    + WR LE   FP LG++P++ + + +    L PI  +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLETRM  242
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ +++ A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPADFMKMKKPHKVPLSKEALRILELMKS  302
            LIEWQL T VRP EA  ARW +ID  N +W IP + MKM++ H VPL+ ++L ILE +K+
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEV  362
            ISGHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F ++V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ  400
            +EAALAH+ K++I  AYNR++YL  R+ LM WWS+ ++
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

188) Ser39006_1293 in NC_022268


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  244 bits (911),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 166/398 (42%), Positives = 246/398 (62%), Gaps = 8/398 (2%)

Query  4    LAKKLTDTEIKNTKPTEKEINLFDGDGLMLRIAPLSKGGKKKWYFRYPVPVTKKRTKISL  63
            +A++LT  +I+ +KP +K   L DG+ L + + P   +  + W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARARALRDEYLSLLANGIDPQIHNSDKANALKDATEHTLQAVARKWLDEKVK  123
            GTYP+++LA AR    E    LA+GIDPQ+ + ++        + T++ VA +W   K  
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW---KAT  114

Query  124  TTGISKDHA-EDIWRSLERNIFPVMGNVPIKEIRPKMLKQHLDPIEQRGVLETLRRIISR  182
              G  K+ + E+ WR LE   FP +G++P+  + + M    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMAALANASIRLETRM  242
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++A A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRARWADIDTENKIWNIPPEFMKMKRPHKVPLSKEALRILENMQP  302
            LIEWQL T VRP EA  ARW +ID  NK+W IP E MKM+R H VPL+ ++L ILE ++P
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISSHREWIFPSIKTPLTHMHEQTANAALIRMGLGGELVAHGMRSIARTAAEECGKFRTEV  362
            IS+HRE IFPS + P    + +TAN AL RMG+ +   AHG+R++A T+ +E G F  +V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LESALAHTKSTEIIAAYNRAEYLVERAGLMQWWGDYIQ  400
            +E+ALAHT   +I  AYNR++YL  R  LM WW++ I+
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

189) EC042_2820 in NC_017626


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  244 bits (910),  Expect = 9e-66, Method: Compositional matrix adjust.
 Identities = 163/400 (41%), Positives = 246/400 (62%), Gaps = 6/400 (1%)

Query  19   TKKLTDTEIKNTKPADKEINLFDGDGLLLRIAPSSKGGKKNWYLRYPVPVTKKRTKMSLG  78
            +++LT  +I+ +KP DK   L DG+ L + + PS+    ++W +RY  P   K T +S+G
Sbjct  2    ANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNS---RSWQFRYKRPGQDKITYLSFG  58

Query  79   TYPHLSLAKARALRDEYLSLLANGVDPQVHITEKTNALKDATEHTLQAVSRKWLDEKIKT  138
            TYP++SLA AR    E    LA+G+DPQ+   E+        + T++ V+ +W     K 
Sbjct  59   TYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKE  116

Query  139  SGISLDHAEDIWRSLEKNIFSTLGDVPIKEIRPKMLKQHLDPIEQRGVLETLRRIISRLN  198
            + I     E+ WR LE   F+ LG +P+  + + M    L PIE +G+LET++R    +N
Sbjct  117  GQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMN  176

Query  199  EIFRYAATEELIEFNPADNLAQRFSKPKKQNMPALPPDELPRFMVALSNASIRLETRMLI  258
            EI  YA    +I+ NP   + + F K K  +M AL P+E+  ++ +++ A+I+  TR LI
Sbjct  177  EIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLI  236

Query  259  EWQLLTWVRPGEAVRARWCDIDEESRFWNIPSEFMKMKRPHKVPLSKEALRILENMRPIS  318
            EWQL T VRP EA  ARW +ID  +++W IP E MKM+R H VPL+ ++L ILE ++PIS
Sbjct  237  EWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPIS  296

Query  319  GHREWVFPSIKAPLSHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEEYGKFRTEVLE  378
            GHRE +FPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  +V+E
Sbjct  297  GHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVIE  355

Query  379  SALAHTKKDEIIAAYNRSEYLVEREELMKWWGDYVSSKKY  418
            +ALAHT K++I  AYNR++YL  R  LM WW++ +    Y
Sbjct  356  AALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSY  395

190) PAJ_2203 in NC_017531


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  243 bits (908),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 161/397 (41%), Positives = 245/397 (62%), Gaps = 6/397 (1%)

Query  18   IAKKLTDTEIKSIKPADKEINLFDGDGLILRIAPLAKGWKKNWYFRYAVPVSKKRTKMSL  77
            +A++LT  +I++ KP DK   L DG+ L + + P      ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNS---RSWQFRYKRPGQDKITYLSF  57

Query  78   GTYPHLTLARARALRDEYLSLLANGIDPQVHNSDKANALKNATEHTFQAVARKWLDDKVK  137
            GTYP+++LA AR    E    LA+GIDPQ+ + ++        + TF+ VA +W     K
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATK  115

Query  138  TSGISKDHAEDIWRSLERNIFPGLGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISRL  197
             + I     E+ WR LE   FP LG++P++ + + +    L PIE +G+LET++R    +
Sbjct  116  EGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLM  175

Query  198  NEIFRYAATEELIEFNPADNLAQRFSKTKKQNMPALPPSELPRFLMVLNNASVRLETRLL  257
            NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++  +  A+++  TR+L
Sbjct  176  NEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFL  235

Query  258  IEWQLLTWVRPGEAVRARWADIDTDNSMWNIPAEFMKMKKPHKVSLSKEALRVLETMKAI  317
            IEWQL T VRP EA  ARW +ID  N +W IP E MKM++ H V+L+ ++L +LE++K+I
Sbjct  236  IEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPI  295

Query  318  SGHREWVFPSIKAPLNHMHEQTANAAIIRMDFGGELVAHGMRSIARTAAEESDKFRTDVL  377
            SGHRE +FPS + P    + +TAN A+ RM+F +   AHG+R++A T+ +E + F  DV+
Sbjct  296  SGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVI  354

Query  378  EAALAHSKKDEIIAAYNRAEYLAERVVLMQWWSGYVQ  414
            EAALAH+ K++I  AYNR++YL  R  LM WWS  ++
Sbjct  355  EAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

191) J450_05365 in NC_021738


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 163/389 (42%), Positives = 251/389 (65%), Gaps = 11/389 (2%)

Query  8    LNDTQIRKAKPEDS--PLRDGNGLLLVI-TSNSKLWRFRYERPFTKKRNDLSIGAYPDIS  64
            L   QI+ AKP D    L DG  L + +  SNS+ W+FRY RP   K   LS+G+YPD+S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  65   LAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISNTYENVAWAWLEHRKTK---KNF  121
            LA+ARE   E R  LA+ IDPQ  +++Q      E + T+  VA  W   +  +   K +
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL  124

Query  122  SDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQYQDEGKLEKLKRAIQKHNEIM  181
             +N +K  + L     +P +G +P++++TAPMAI A++  + +G LE +KR+ Q  NEIM
Sbjct  125  EGNWRK--LELYA---FPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM  179

Query  182  MFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDLGEFLYTLQNAQIHLQTRYLILWQ  241
             +AV+  +I  NP A I   F    V H K+++P+++ +++ T+  A+I+  TR+LI WQ
Sbjct  180  NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ  239

Query  242  LLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRGIEHKITLSRQAIALLREIKKLSGGK  301
            L TM RPNEA+ A+W +ID   KLW IP E MK   EH + L+ Q++A+L  IK +SG +
Sbjct  240  LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHR  299

Query  302  TYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLVAHGLRAIASTYLNEKGYNSDLIEVALS  361
             ++FPS +NP+   +++TAN A+ RMG+K++  AHGLRA+AST LNE+G+++D+IE AL+
Sbjct  300  EFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALA  359

Query  362  HLNSDRIKAAYDRGERLEQRFKLLQVWAD  390
            H + ++I+ AY+R + L+ R KL+  W++
Sbjct  360  HTDKNQIRKAYNRTDYLDSRRKLMSWWSE  388

192) Y11_42091 in NC_017564


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  242 bits (903),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 163/397 (42%), Positives = 247/397 (63%), Gaps = 6/397 (1%)

Query  22   LAKKLTDTEIKSAKPADKEINLFDGDGLILRIAPLSRGGKKNWYFRYAVPVTKKRTKVSL  81
            +A++LT  +I++AKP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  82   GTYPHLTLARARVLRDEYLSLLANGIDPQVHNNDKANALKDATEHTLQAVARKWLDEKVK  141
            GTYP+++LA AR    E    LA+GIDPQ+ ++++        + T++ VA +W     K
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATK  115

Query  142  TSGISQDHANDIWRSLERNIFPGLGNVPIKEIRPKLLKQHLDPIEQRGVLETLRRIISRL  201
             + I +   ++ WR LE   FP LG++P+  + + +    L PIE +G+LET++R    +
Sbjct  116  EGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLM  175

Query  202  NEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMVALANASIRLETRML  261
            NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ ++A A+I+  TR L
Sbjct  176  NEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFL  235

Query  262  IEWQLLTWVRPGEAVRSRWVDIDTENKIWNIPPEFMKMKRPHKVPLSKEALRILENMQPI  321
            IEWQL T VRP EA  +RW +ID  NK+W IP E MKM+R H VPL+ ++L ILE ++PI
Sbjct  236  IEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPI  295

Query  322  SSHREWVFPSIKTPLTHMHEQTANAALIRMGLGGELVAHGMRSIARTAAEESGKFRTEVL  381
            S+HRE +FPS + P    + +TAN AL RMG+ +   AHG+R++A T+ +E G F  +V+
Sbjct  296  SGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDVI  354

Query  382  ESALAHTKSTEIIAAYNRAEYLVERAGLMQWWGDYIQ  418
            E+ALAHT   +I  AYNR++YL  R  LM WW++ I+
Sbjct  355  EAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

193) YE0993 in NC_008800


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  240 bits (896),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 161/402 (41%), Positives = 247/402 (62%), Gaps = 8/402 (1%)

Query  4    LAKKLTDTEIKSTKPSDKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVTKKRTKMSL  63
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  64   GTYPHLTLARSRALRDEYLSLLANGIDPQV-HNSYKANALKDATEHTLQAVARKWLDEKV  122
            GTYP+++LA +R    E    LA+GIDPQ+  +  KA+++ +    T++ VA +W     
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQW--KAT  114

Query  123  KTSGISKDHAEDIWRSLERNIFPGLGNVPIKEIRPKLLKQHLDPIEQRGVLETLRRIISR  182
            K + I     E+ WR LE   FP LG++P+  + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  183  LNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMASLANASVRLETRM  242
            +NEI  YA    +I+ NP   + + F K K  +M AL P E+  ++ ++A A+++  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  243  LIEWQLLTWVRPGEAVRVRWVDIDIDNGMWNIPAEFMKMKNPHKVPLSKEAIRILKSMEP  302
            LIEWQL T VRP EA   RW +ID+ N +W IP E MKM+  H VPL+ +++ IL ++ P
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  303  ISRHREWIFPSIKAPLSHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTEV  362
            IS HRE IFPS + P    + +TAN A+ RMGF +   AHG+R++A T+ +E G F  +V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  363  LEAALAHSKKDEIIAAYNRAEYLAERMVLMQWWGDYVTAQKF  404
            +EAALAH+ K++I  AYNR++YL  R  LM WW++ +    +
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSY  395

194) YE105_C3094 in NC_015224


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  240 bits (897),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 163/398 (41%), Positives = 248/398 (63%), Gaps = 8/398 (2%)

Query  22   LAKKLTDTEIKSTKPSDKEINLFDGDGLILRIAPLSRGGKKNWYFRYAVPVTKKRTKVSL  81
            +A++LT  +I+++KP DK   L DG+ L + + P   +  ++W FRY  P   K T +S+
Sbjct  1    MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRP---SNSRSWQFRYKRPGQDKITYLSF  57

Query  82   GTYPHLTLARARVLRDEYLSLLANDIDPQVHNNDKANALKDATEHTLQAVARKWLDEKVK  141
            GTYP+++LA AR    E    LA++IDPQ+ ++++        + T++ VA +W   K  
Sbjct  58   GTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW---KAT  114

Query  142  TSGISKDHAVD-IWRSLERNIFPGLGNVPIKEIRPKLLKQHLDPIEQRGVLETLRRIISR  200
              G  K+ +++  WR LE   FP LG++P+  + + +    L PIE +G+LET++R    
Sbjct  115  KEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQL  174

Query  201  LNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMAALANASIRLETRM  260
            +NEI   A    +I+ NP   + + F K K  +M AL P E+  ++ ++A A+I+  TR 
Sbjct  175  MNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRF  234

Query  261  LIEWQLLTWVRPGEAVRARWADIDTENKIWNIPPEFMKMKRPHKVPLSKEALRILENMQP  320
            LIEWQL T VRP EA  ARW +ID  NK+W IP E MKM+R H VPL+ ++L ILE ++P
Sbjct  235  LIEWQLHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKP  294

Query  321  ISSHREWVFPSIKTPLTHMHEQTANAALIRMGLGGELVAHGMRSIARTAAEECGKFRTEV  380
            IS+HRE +FPS + P    + +TAN AL RMG+ +   AHG+R++A T+ +E G F  +V
Sbjct  295  ISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQG-FEPDV  353

Query  381  LESALAHTKSTEIIAAYNRAEYLVERADLMQWWGDYIQ  418
            +E+ALAHT   +I  AYNR++YL  R  LM WW++ I+
Sbjct  354  IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE  391

195) AHML_14825 in NC_021290


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  237 bits (884),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 157/388 (41%), Positives = 254/388 (66%), Gaps = 11/388 (2%)

Query  3    LSDTAARQAKFTGKQQKLSDEKGLFL-LITSSGKYWRLKFRFGGKEKV--LALGVYPEVS  59
            L+    + AK  +K  +LSD   L++ +  S+++ W+++++  G++K+  L++G YP++S
Sbjct  5    LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS  64

Query  60   lkearvkreearrllaDGIDPSLARKQSKVASRLASENSFEVIAREWHQGQLARWSPGHA  119
            L EAR K  EAR+ LADGIDP LA+ + K  +    + +F  +A +W   +         
Sbjct  65   LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATK----EGQIK  120

Query  120  QRVIES----LEADAFPELGLVPVAELTAPIMLDALRKIEARGATETAGRVLQRISSVMR  175
            ++ +E+    LE  AFP LG +PV+ LTAP+ + ALR IE++G  ET  R  Q ++ +M 
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  176  YAIQTGRVSYNPAQDLKGALRATKQEHRPALPRADLPEFYRRLAAEPLNPATRLAIHLLM  235
            YA+++G +  NP  ++++ ++  K  H  AL   ++ ++ R +A+  ++  TR+ I+  +
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  236  LTMTRPGEVRFARWDEFDMARAEWRIPAERMKMRAPHIVPLSRQALAVLEELRLISGHCE  295
             TM RP E   ARW+E+DM    W IP ERMKM   H+VPL+ Q+LA+LE ++ ISGH E
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  296  LLFPSERKLTDPMSENTLSYAMGRMGYKGIATPHGFRALASTILNEEGFDPDVIERQLAH  355
            ++FPS R+   P   +T + A+GRMG+K+ +T+HG+RALAST LNE+GF+PDVIE  LAH
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAH  360

Query  356  AERNKVRAAYHRAEYLDDRRKLLQWLAD  383
            +++N++R AY+R++YLD RRKL+ W ++
Sbjct  361  TDKNQIRKAYNRTDYLDSRRKLMSWWSE  388

196) SEEH1578_22495 in NC_021810


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  208 bits (774),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 136/336 (41%), Positives = 200/336 (60%), Gaps = 2/336 (0%)

Query  6    KPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPV  65
            + LT  +I  AKP+   Y L DG  LY+ V+ S  ++W+F Y +P   K T  S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA ARE     R+ L +GIDP+            +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LG+ PV+ + + M    L P+E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL+P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGM  341
             +FPS R+P    + +TAN AL RMGF +   AHG+
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGL  336

197) CFSAN002069_18585 in NC_021812


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  208 bits (774),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 136/336 (41%), Positives = 200/336 (60%), Gaps = 2/336 (0%)

Query  6    KPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPV  65
            + LT  +I  AKP+   Y L DG  LY+ V+ S  ++W+F Y +P   K T  S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA ARE     R+ L +GIDP+            +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LG+ PV+ + + M    L P+E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL+P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGM  341
             +FPS R+P    + +TAN AL RMGF +   AHG+
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGL  336

198) STM2740 in NC_003197


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  208 bits (774),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 136/336 (41%), Positives = 200/336 (60%), Gaps = 2/336 (0%)

Query  6    KPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPV  65
            + LT  +I  AKP+   Y L DG  LY+ V+ S  ++W+F Y +P   K T  S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA ARE     R+ L +GIDP+            +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LG+ PV+ + + M    L P+E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL+P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGM  341
             +FPS R+P    + +TAN AL RMGF +   AHG+
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGL  336

199) STM474_2874 in NC_016857


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  208 bits (774),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 136/336 (41%), Positives = 200/336 (60%), Gaps = 2/336 (0%)

Query  6    KPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPV  65
            + LT  +I  AKP+   Y L DG  LY+ V+ S  ++W+F Y +P   K T  S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA ARE     R+ L +GIDP+            +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LG+ PV+ + + M    L P+E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL+P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGM  341
             +FPS R+P    + +TAN AL RMGF +   AHG+
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGL  336

200) STU288_13860 in NC_021151


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  208 bits (774),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 136/336 (41%), Positives = 200/336 (60%), Gaps = 2/336 (0%)

Query  6    KPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPV  65
            + LT  +I  AKP+   Y L DG  LY+ V+ S  ++W+F Y +P   K T  S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA ARE     R+ L +GIDP+            +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LG+ PV+ + + M    L P+E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL+P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGM  341
             +FPS R+P    + +TAN AL RMGF +   AHG+
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGL  336

201) STMUK_2728 in NC_016863


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  208 bits (774),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 136/336 (41%), Positives = 200/336 (60%), Gaps = 2/336 (0%)

Query  6    KPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPV  65
            + LT  +I  AKP+   Y L DG  LY+ V+ S  ++W+F Y +P   K T  S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA ARE     R+ L +GIDP+            +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LG+ PV+ + + M    L P+E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL+P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGM  341
             +FPS R+P    + +TAN AL RMGF +   AHG+
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGL  336

202) CFSAN001921_03425 in NC_021814


> NC_002505_P5|2|G1|15641762|NP_231394.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|401..1636|-|VC1758|phage 
family integrase
Length=411

 Score =  208 bits (774),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 136/336 (41%), Positives = 200/336 (60%), Gaps = 2/336 (0%)

Query  6    KPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPV  65
            + LT  +I  AKP+   Y L DG  LY+ V+ S  ++W+F Y +P   K T  S+G YP 
Sbjct  3    NNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPD  62

Query  66   VTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLS  125
            ++LA ARE     R+ L +GIDP+            +++ T+  VAEQW     + +++ 
Sbjct  63   MSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW--KATKEGQIK  120

Query  126  EDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFR  185
            E    + WR LE+  FP LG+ PV+ + + M    L P+E QG+LET++R    +NEI  
Sbjct  121  EKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMN  180

Query  186  FAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWEL  245
            +A++  +I+ NP   +   FKK K  +M AL+P E+  L+ ++  A+I+  TR LIEW+L
Sbjct  181  YAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL  240

Query  246  LTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRP  305
             T VRP EA +ARW +IDM +  W IP   MKMNR H VPL+ Q+L +L+ + P+S HR 
Sbjct  241  HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE  300

Query  306  WVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGM  341
             +FPS R+P    + +TAN AL RMGF +   AHG+
Sbjct  301  FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGL  336