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Homologs of VC0176 gene of NC_002505_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Shewana3_3859
( YP_871483.1 )

XRE family transcriptional regulator

NC_008577
(Shewanella sp. ANA-3)

1e-26

2) Sbal175_0132
( YP_006018739.1 )

helix-turn-helix domain-containing protein

NC_017571
(Shewanella baltica BA175)

8e-26

3) Sbal223_4176
( YP_002360069.1 )

XRE family transcriptional regulator

NC_011663
(Shewanella baltica OS223)

8e-26

4) ambt_21585
( YP_004469608.1 )

putative transcriptional regulator

NC_015554
(Alteromonas sp. SN2)

9e-26

5) Shewmr7_3893
( YP_739927.1 )

XRE family transcriptional regulator

NC_008322
(Shewanella sp. MR-7)

1e-25

6) Sbal223_4196
( YP_002360085.1 )

XRE family transcriptional regulator

NC_011663
(Shewanella baltica OS223)

7e-25

7) swp_1006
( YP_002310396.1 )

Transcriptional regulator, putative

NC_011566
(Shewanella piezotolerans WP3)

1e-24

8) Ping_2553
( YP_943873.1 )

DNA-binding transcriptional regulator

NC_008709
(Psychromonas ingrahamii 37)

2e-20

9) PCA10_07110
( YP_008101048.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

1e-17

10) Ser39006_0723
( YP_008521105.1 )

helix-turn-helix domain protein

NC_022268
(Serratia sp. ATCC 39006)

3e-16

11) ENC_44110
( YP_007847613.1 )

Helix-turn-helix.

NC_021046
(Enterobacter cloacae NCTC 9394)

2e-15

12) ambt_05270
( YP_004466404.1 )

XRE family transcriptional regulator

NC_015554
(Alteromonas sp. SN2)

3e-15

13) ECO111_0885
( YP_003233393.1 )

putative transcriptional regulator

NC_013364
(Escherichia coli 11128)

3e-15

14) ECO103_0860
( YP_003220845.1 )

transcriptional regulator

NC_013353
(Escherichia coli 12009)

3e-15

15) G655_10975
( YP_007709042.1 )

transcriptional regulator

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-14

16) PADK2_10530
( YP_006482095.1 )

transcriptional regulator

NC_018080
(Pseudomonas aeruginosa DK2)

2e-14

17) PLES_22941
( YP_002439897.1 )

putative transcriptional regulator

NC_011770
(Pseudomonas aeruginosa LESB58)

2e-14

18) PA2780
( NP_251470.1 )

hypothetical protein

NC_002516
(Pseudomonas aeruginosa PAO1)

2e-14

19) M062_14810
( YP_008133389.1 )

transcriptional regulator

NC_021577
(Pseudomonas aeruginosa RP73)

2e-14

20) PA14_28130
( YP_790399.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

2e-14

21) Rahaq2_1041
( YP_005199073.1 )

putative transcriptional regulator

NC_016818
(Rahnella aquatilis CIP 78.65)

4e-14

22) Dda3937_03235
( YP_003885124.1 )

transcriptional regulator

NC_014500
(Dickeya dadantii 3937)

5e-14

23) Dda3937_03233
( YP_003885126.1 )

transcriptional regulator

NC_014500
(Dickeya dadantii 3937)

1e-13

24) Dd586_3971
( YP_003335504.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

9e-14

25) Spro_1541
( YP_001477773.1 )

XRE family transcriptional regulator

NC_009832
(Serratia proteamaculans 568)

2e-13

26) Dd586_3973
( YP_003335506.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

3e-13

27) ES15_3405
( YP_006344489.1 )

transcriptional regulator

NC_017933
(Cronobacter sakazakii ES15)

5e-13

28) Smlt2450
( YP_001972232.1 )

transcriptional repressor protein

NC_010943
(Stenotrophomonas maltophilia K279a)

6e-13

29) CTU_05290
( YP_003208892.1 )

hypothetical protein

NC_013282
(Cronobacter turicensis z3032)

8e-13

30) PC1_4121
( YP_003019671.1 )

XRE family transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

1e-12

31) Bphy_6926
( YP_001862982.1 )

XRE family transcriptional regulator

NC_010625
(Burkholderia phymatum STM815)

2e-12

32) PC1_4123
( YP_003019673.1 )

XRE family transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

3e-12

33) XACM_1661
( YP_004851239.1 )

transcriptional regulator

NC_016010
(Xanthomonas axonopodis F1)

8e-12

34) CSSP291_15905
( YP_007442039.1 )

transcriptional regulator

NC_020260
(Cronobacter sakazakii Sp291)

1e-11

35) Pecwa_4406
( YP_003261705.1 )

XRE family transcriptional regulator

NC_013421
(Pectobacterium wasabiae WPP163)

2e-11

36) ECENHK_15595
( YP_006579584.1 )

hypothetical protein

NC_018405
(Enterobacter cloacae ENHKU01)

3e-11

37) R2APBS1_1684
( YP_007590049.1 )

putative transcription factor, MBF1 like protein

NC_020541
(Rhodanobacter sp. 2APBS1)

3e-11

38) Dd586_3769
( YP_003335305.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

5e-11

39) Bphy_6784
( YP_001862851.1 )

XRE family transcriptional regulator

NC_010625
(Burkholderia phymatum STM815)

6e-11

40) Dd703_3225
( YP_002988810.1 )

XRE family transcriptional regulator

NC_012880
(Dickeya dadantii Ech703)

1e-10

41) Q7S_15685
( YP_005402917.1 )

helix-turn-helix domain-containing protein

NC_017047
(Rahnella aquatilis HX2)

1e-10

42) Rahaq_3111
( YP_004213832.1 )

helix-turn-helix domain-containing protein

NC_015061
(Rahnella sp. Y9602)

1e-10

43) plu4472
( NP_931638.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

1e-10

44) XAC1499
( NP_641834.1 )

transcriptional regulator

NC_003919
(Xanthomonas axonopodis 306)

1e-10

45) XCAW_02829
( YP_007650804.1 )

Hypothetical Protein

NC_020815
(Xanthomonas citri Aw12879)

1e-10

46) RORB6_16000
( YP_007875433.1 )

hypothetical protein

NC_021066
(Raoultella ornithinolytica B6)

1e-10

47) plu4475
( NP_931641.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-10

48) Rahaq2_3140
( YP_005201100.1 )

putative transcriptional regulator

NC_016818
(Rahnella aquatilis CIP 78.65)

2e-10

49) Dd703_3425
( YP_002989008.1 )

XRE family transcriptional regulator

NC_012880
(Dickeya dadantii Ech703)

7e-10

50) EPYR_00430
( YP_005801181.1 )

transcriptional regulator

NC_017390
(Erwinia pyrifoliae DSM 12163)

8e-10

51) EpC_04120
( YP_002647449.1 )

transcriptional regulator

NC_012214
(Erwinia pyrifoliae Ep1/96)

8e-10

52) EAM_3011
( YP_003540077.1 )

DNA-binding protein

NC_013971
(Erwinia amylovora ATCC 49946)

9e-10

53) EAMY_0409
( YP_003529767.1 )

transcriptional regulator

NC_013961
(Erwinia amylovora CFBP1430)

9e-10

54) XACM_3184
( YP_004852731.1 )

transcriptional regulator

NC_016010
(Xanthomonas axonopodis F1)

9e-10

55) KPN_02949
( YP_001336585.1 )

putative transcriptional regulator

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

1e-09

56) Dd586_1468
( YP_003333041.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

1e-09

57) xccb100_1037
( YP_001902443.1 )

transcriptional regulator

NC_010688
(Xanthomonas campestris B100)

1e-09

58) Dda3937_03632
( YP_003881777.1 )

hypothetical protein

NC_014500
(Dickeya dadantii 3937)

1e-09

59) Dd586_0877
( YP_003332468.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

1e-09

60) Dda3937_02762
( YP_003883700.1 )

transcriptional regulator

NC_014500
(Dickeya dadantii 3937)

1e-09

61) PCC21_037320
( YP_006648388.1 )

hypothetical protein

NC_018525
(Pectobacterium carotovorum PCC21)

2e-09

62) PCC21_037330
( YP_006648389.1 )

hypothetical protein

NC_018525
(Pectobacterium carotovorum PCC21)

2e-09

63) SARI_03129
( YP_001572111.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

2e-09

64) CFSAN002050_16840
( YP_008261266.1 )

XRE family transcriptional regulator

NC_021818
(Salmonella enterica CFSAN002050)

2e-09

65) SeHA_C2922
( YP_002046706.1 )

XRE family transcriptional regulator

NC_011083
(Salmonella enterica SL476)

3e-09

66) Dda3937_02761
( YP_003883701.1 )

transcriptional regulator

NC_014500
(Dickeya dadantii 3937)

3e-09

67) Dd586_1467
( YP_003333040.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

3e-09

68) Dd1591_1497
( YP_003003834.1 )

XRE family transcriptional regulator

NC_012912
(Dickeya zeae Ech1591)

3e-09

69) Spro_4126
( YP_001480349.1 )

XRE family transcriptional regulator

NC_009832
(Serratia proteamaculans 568)

5e-09

70) CFSAN002050_16845
( YP_008261267.1 )

XRE family transcriptional regulator

NC_021818
(Salmonella enterica CFSAN002050)

7e-09

71) Dda3937_04485
( YP_003881778.1 )

hypothetical protein

NC_014500
(Dickeya dadantii 3937)

9e-09

72) Dd586_0878
( YP_003332469.1 )

XRE family transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

1e-08

73) Dd703_3224
( YP_002988809.1 )

XRE family transcriptional regulator

NC_012880
(Dickeya dadantii Ech703)

2e-08

74) SARI_03130
( YP_001572112.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

3e-07

• Sequence Alignments

1) O3Y_00800 in NC_016944


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MSFQNPIPlrlkearkkaklSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60
            MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD
Sbjct  1    MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102
            ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK
Sbjct  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102

2) VCD_000628 in NC_012667


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MSFQNPIPlrlkearkkaklSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60
            MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD
Sbjct  1    MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102
            ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK
Sbjct  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102

3) VCD_001434 in NC_012668


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MSFQNPIPlrlkearkkaklSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60
            MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD
Sbjct  1    MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102
            ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK
Sbjct  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102

4) Vch1786_I2460 in NC_016445


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MSFQNPIPlrlkearkkaklSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60
            MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD
Sbjct  1    MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102
            ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK
Sbjct  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102

5) VC0176 in NC_002505


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MSFQNPIPlrlkearkkaklSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60
            MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD
Sbjct  1    MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102
            ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK
Sbjct  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102

6) N175_01610 in NC_022223


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 82/98 (84%), Positives = 90/98 (92%), Gaps = 0/98 (0%)

Query  1   MSFDNPIPIRLKEARKKAKLSQKMLGVRIGMDESSASPRMNQYEKGKHTPDVHTLKLIAD  60
           MSF+NPIP+RLKEARKKAKLSQK LGVRIGMDESSASPRMNQYEKGKHTPDV+TLKLIAD
Sbjct  1   MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61  ELGVPLNYFFCEDDVSAELAILINQLSKKERKALLESI  98
           ELGVPLNYFFCEDD SAELA LI+++S  E+K LL  +
Sbjct  61  ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

7) VAA_00604 in NC_015633


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 82/98 (84%), Positives = 90/98 (92%), Gaps = 0/98 (0%)

Query  1   MSFDNPIPIRLKEARKKAKLSQKMLGVRIGMDESSASPRMNQYEKGKHTPDVHTLKLIAD  60
           MSF+NPIP+RLKEARKKAKLSQK LGVRIGMDESSASPRMNQYEKGKHTPDV+TLKLIAD
Sbjct  1   MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61  ELGVPLNYFFCEDDVSAELAILINQLSKKERKALLESI  98
           ELGVPLNYFFCEDD SAELA LI+++S  E+K LL  +
Sbjct  61  ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

8) VS_1357 in NC_011753


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  133 bits (488),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 76/98 (78%), Positives = 87/98 (89%), Gaps = 0/98 (0%)

Query  1   MPFKNPIPERLKQARKKAKLSQKALGESIGMDASSASPRMNQYEKGKHAPDVQTLKLIAD  60
           M+F+NPIP RLK+ARKKAKLSQKALG  IGMD SSASPRMNQYEKGKH+PDVQTLKLIAD
Sbjct  1   MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61  ELGVPLNYFLCEDESSAELACMISEMTESERKKLIATL  98
           ELGVPLNYF+CED+ SAELAC+I  M+  E+K+L+  L
Sbjct  61  ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

9) N646_0702 in NC_022349


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  124 bits (453),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 66/95 (70%), Positives = 86/95 (91%), Gaps = 0/95 (0%)

Query  1   MLFNNPLPARLKHARKQANLSQKALGIRIGMDDSSASARMNQYERERHTPDVKTLKLIAD  60
           M F+NP+P RLK+ARK+A+LSQKALG+RIGMD+SSAS+RMNQYE+ +HTPDV+TLKLIAD
Sbjct  1   MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61  ELNVPLNYFFCEDEITAELAVNLHKLSNDDKQRVL  95
           EL VPLNYFFCED+ +AELA  +H++S ++K+ +L
Sbjct  61  ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLL  95

10) PBPRA1807 in NC_006370


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  120 bits (437),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 62/95 (66%), Positives = 83/95 (88%), Gaps = 0/95 (0%)

Query  4   ESPLPIRLKEARKAAGISQKELGIRLGMDPSSASGRMNHYEKGRHMPDIATLRRIADELG  63
           ++P+P+RLKEARK A +SQK LG+R+GMD SSAS RMN+YEKG+H PD+ TL+ IADELG
Sbjct  4   QNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELG  63

Query  64  VPLSYFFCDSDNSAKLACLIEKLSEEDKKELIRKL  98
           VPL+YFFC+ D+SA LACLI+++S E+KK+L++ L
Sbjct  64  VPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

11) VEJY3_22961 in NC_016614


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  118 bits (429),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 63/98 (65%), Positives = 81/98 (83%), Gaps = 0/98 (0%)

Query  1   MQNHNPIPERLKAARKKAKITQKDLGVRIGMEESSASGRMNHYEKGRHVPDIGTLTRMAE  60
           M  +NPIP RLK ARKKAK++QK LGVRIGM+ESSAS RMN+YEKG+H PD+ TL  +A+
Sbjct  1   MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61  ELDVPLNYFFCRNELSAELACLVDKLSDEDKAALIAKL  98
           EL+VPLNYFFC ++ SAELACL++++S E+K  L+  L
Sbjct  61  ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

12) VV1_3190 in NC_004459


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  115 bits (420),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 62/93 (67%), Positives = 78/93 (84%), Gaps = 0/93 (0%)

Query  3   DNPIPMRLKKARKHAKITQKNLGIMIGMDESSASGRMNHYEKGRHTPDISTLRKMADALG  62
           +NPIP+RLK ARK AK++QK LG+ IGMDESSAS RMN+YEKG+HTPD+ TL+ +AD LG
Sbjct  4   QNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELG  63

Query  63  VPLNYFFCEDEASAELATAISRLSEAKRNQVLK  95
           VPLNYFFCED+ SAELA  I R+S   ++++LK
Sbjct  64  VPLNYFFCEDDESAELACLIHRMSPEEKKNLLK  96

13) VAA_02445 in NC_015633


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  114 bits (416),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 57/102 (56%), Positives = 82/102 (81%), Gaps = 0/102 (0%)

Query  1    MPTPSPLPIRLKEARTRAGISQKTLGIRIGMDPSVASGRMNHYEKGRHTPDINTLRKMAE  60
            M+  +P+P+RLKEAR +A +SQK+LG+RIGMD S AS RMN+YEKG+HTPD++TL+ +A+
Sbjct  1    MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61   ELNVPIAFFFCDSPKTAELLCLIENLSEEEKSTLIQKLASNQ  102
            EL VP+ +FFC+   +AEL CLI+ +S EEK  L++ L S++
Sbjct  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102

14) Shewana3_3859 in NC_008577


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  113 bits (410),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 58/94 (62%), Positives = 78/94 (83%), Gaps = 0/94 (0%)

Query  7   NPLPLRLKQARTAKGISQKQLGIQLGMEVGTASARMNQYEKGKHTPDYQTLKAIADELGV  66
           NP+PLRLK+AR    +SQK LG+++GM+ ++AS+RMNQYEKGKHTPD QTLK IADELGV
Sbjct  5   NPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGV  64

Query  67  PVAYFFCESESTAKLLCLLEKMTEEEKSNLIEQI  100
           P+ YFFCE + +A L CL+++M+ EEK NL+ ++
Sbjct  65  PLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

15) VFMJ11_1058 in NC_011184


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 64/98 (66%), Positives = 79/98 (81%), Gaps = 0/98 (0%)

Query  1   MERENPIPKRLKEARKHAKVTQKELGIRIGMEESSASGRMNHYEKGRHTPDISVLQRMAK  60
           M  +NPIP RLKEARK AK++QK LG+RIGM+ESSAS RMN+YEKG+HTPD+  L+ +A 
Sbjct  1   MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61  ELGVPLSYFFCESDSLAELNLLIGKMSEEERVKLIKSL  98
           ELGVPL+YFFCE D  AEL  LI +MS EE+ +L+K L
Sbjct  61  ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

16) Sbal175_0132 in NC_017571


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  110 bits (400),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 59/95 (63%), Positives = 80/95 (85%), Gaps = 0/95 (0%)

Query  4   ENTVPKRLKEARTKAGITQADLGAKIGIHQNSASSRMNHYELGRHTPDINTLQRIADELG  63
           +N +P RLKEAR KA ++Q  LG +IG++++SAS+RMN+YE G+HTPD++TL+ IADELG
Sbjct  4   QNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELG  63

Query  64  VPLNYFFCEDDASAKLACLIDQLPKEQKIALIKKL  98
           VPLNYFFCEDD SA LACLI++++ E+K  L+K L
Sbjct  64  VPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

17) Sbal223_4176 in NC_011663


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  110 bits (400),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 59/95 (63%), Positives = 80/95 (85%), Gaps = 0/95 (0%)

Query  4   ENTVPKRLKEARTKAGITQADLGAKIGIHQNSASSRMNHYELGRHTPDINTLQRIADELG  63
           +N +P RLKEAR KA ++Q  LG +IG++++SAS+RMN+YE G+HTPD++TL+ IADELG
Sbjct  4   QNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELG  63

Query  64  VPLNYFFCEDDASAKLACLIEQLPKEQKIALIKKL  98
           VPLNYFFCEDD SA LACLI++++ E+K  L+K L
Sbjct  64  VPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

18) ambt_21585 in NC_015554


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  110 bits (399),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 59/101 (59%), Positives = 81/101 (81%), Gaps = 0/101 (0%)

Query  1    MAFKNPLPQRLREARQRADISQKNLGIRIGMEPSSASGRMNHYEKGRHIPDLQTLKHLAE  60
            M+F+NP+P RL+EAR++A +SQK LG+RIGM+ SSAS RMN+YEKG+H PD+QTLK +A+
Sbjct  1    MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61   ELDVPLNYFFCETEEMAKLVKIFYQMDKERQSELLRILEQK  101
            EL+VPLNYFFCE +E A L  ++ +M  E + +LL+ L  K
Sbjct  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISK  101

19) Shewmr7_3893 in NC_008322


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  109 bits (397),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 63/92 (69%), Positives = 78/92 (85%), Gaps = 0/92 (0%)

Query  4   NPIPNRLKQARKQAGYTQMQLGVMIGMDEGSASGRMNHYEKGRHTPDIRTLKKMANALGV  63
           NPIP RLK+ARK+A  +Q  LGV IGMDE+SAS RMN+YEKG+HTPD++TLK +A+ LGV
Sbjct  5   NPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGV  64

Query  64  PLNYFFCEDDISAELSIQIDRLSPEKKQMLLQ  95
           PLNYFFCEDD SAEL+  I+R+SPE K+ LL+
Sbjct  65  PLNYFFCEDDESAELACLIHRMSPEEKKNLLK  96

20) N175_01920 in NC_022223


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  108 bits (392),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 53/102 (52%), Positives = 79/102 (78%), Gaps = 0/102 (0%)

Query  1    MPTPSPLPIRLKEARTRAGISQKTLGIRIVMDPSVARGRMDHYEKGRHTPVINTLRKMAE  60
            M+  +P+P+RLKEAR +A +SQK+LG+RI MD S A  RM++YEKG+HTP ++TL+ +A+
Sbjct  1    MSFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIAD  60

Query  61   ELNVPIAFFFCDSPKTAELLCLIENLSEEEKSTLIQKLASNQ  102
            EL VP+ +FFC+   +AEL CLI+ +S EEK  L++ L S++
Sbjct  61   ELGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISKK  102

21) Sbal223_4196 in NC_011663


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  107 bits (388),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 54/94 (58%), Positives = 77/94 (82%), Gaps = 0/94 (0%)

Query  7   NPLPIRLKQARISKGISQKQLGIQLGMEVGSASARMNQYEKGKHTPDYKTLKAMANELGV  66
           NP+P+RLK+AR    +SQK LG+++GM+ +SAS+RMNQYEKGKHTPD +TLK +A+ELGV
Sbjct  5   NPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGV  64

Query  67  PVAYFFCESKSTAELLCLLEKMTEDEKAALVHQI  100
           P+ YFFCE   +AEL CL+++M+ +EK  L+ ++
Sbjct  65  PLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

22) swp_1006 in NC_011566


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score =  106 bits (384),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 55/94 (59%), Positives = 75/94 (80%), Gaps = 0/94 (0%)

Query  7   NPLPLRLKQARTALGISQKQLGIQLGMEPGTASARMNHYEKGKHTPDYATLKAMADELGV  66
           NP+PLRLK+AR    +SQK LG+++GM+ ++AS+RMN+YEKGKHTPD  TLK +ADELGV
Sbjct  5   NPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGV  64

Query  67  PVAYFFCESEKNAQLLCLLEQMSDKEKDILIEKL  100
           P+ YFFCE + +A+L CL+++MS  EK  L+  L
Sbjct  65  PLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

23) PSM_A2064 in NC_014803


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 97.8 bits (352),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 51/98 (53%), Positives = 74/98 (76%), Gaps = 0/98 (0%)

Query  2    ETPTPSRLKSARKAAGLTQQQLGMALGMEPNTASARMNQYEKGKHAPDFLTMKRIAKELD  61
            + P P RLK ARK A L+Q+ LG+ +GM+ ++AS+RMNQYEKGKH+PD  T+K IA EL+
Sbjct  4    QNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELG  63

Query  62   VPVAYFYCEEDVLSELICTLGKLSSTDQKELLMKLKEK  99
            VP+ YF+CE+D  +EL C + ++S+ ++K+LL  L  K
Sbjct  64   VPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISK  101

24) PSHAa2351 in NC_007481


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 95.7 bits (344),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 51/76 (68%), Positives = 68/76 (90%), Gaps = 0/76 (0%)

Query  1   MTQKELGIRIGMDQSSASSRMNHYEKDRHTPDIQTLQRMADELKVPLNYLFCDSAESAEL  60
           ++QK LG+RIGMD+SSAS+RMN+YEK++HTPD+QTL+ +ADEL VPLNY+FC+  ESAEL
Sbjct  20  LSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYFFCEDDESAEL  79

Query  61  ACLIDCLSTEEKQRLI  76
           ACLI+ +S EEK+ L+
Sbjct  80  ACLIHRMSPEEKKNLL  95

25) Ping_2553 in NC_008709


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 92.3 bits (331),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 48/83 (58%), Positives = 69/83 (84%), Gaps = 0/83 (0%)

Query  2    KISQKDLGIKIGIDPSSASGRMNHYETGRHMPDLDTLKKLAKELDVPVNYFFCETEENAT  61
            K+SQK LG++IG+D SSAS RMN+YE G+H PD++TLK +A EL+VP+NYFFCE +E+A 
Sbjct  19   KLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYFFCEDDESAE  78

Query  62   LACLIDKLDDETKRKLIQLLENK  84
            LACLI+++  E K++L++ L +K
Sbjct  79   LACLIHRMSPEEKKNLLKDLISK  101

26) PCA10_07110 in NC_021499


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 45/86 (53%), Positives = 63/86 (74%), Gaps = 0/86 (0%)

Query  7   RLKEARKAAGLSQESLGIRAEIDPMSASARMNQYEKGKHEPNIVVVRQIAAALDLPEAYF  66
           RLKEARK A LSQ +LG+R  +D  SAS+RMNQYEKGKH P++  ++ IA  L++P  YF
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  67  YAADDDMAELLRLFHKLSREKRDEVL  92
           +  DD+ AEL  L+H++S E + ++L
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLL  95

27) Ser39006_0723 in NC_022268


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 78.6 bits (279),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 43/94 (46%), Positives = 69/94 (74%), Gaps = 0/94 (0%)

Query  6   NYHDIFCQRLKQARNTKGLSQKQLGIDAGIDEFVASTRINRYERGIHQANIETIQLLAEV  65
           ++++ +  RLK+AR+   LSQK LG+  G+DE  AS R+N+YE+G H ++++T++L+A+ 
Sbjct  2   SFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADE  61

Query  66  LQVPLAYFYTADDELAELILAFQALSPEEKPEIL  99
           L VPL YF+  DDE AEL   ++ +SPEEK ++L
Sbjct  62  LGVPLNYFFCEDDESAELACLIHRMSPEEKKNLL  95

28) ENC_44110 in NC_021046


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 76.0 bits (269),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 42/89 (48%), Positives = 63/89 (71%), Gaps = 0/89 (0%)

Query  14   RLKEVRLDMALSQKSLGILAGIDEFAASARINRYEKGVHQASIEVVRHLAKVLEVPVAYF  73
            RLKE R    LSQK+LG+  G+DE +AS+R+N+YEKG H + ++ ++ +A  L VP+ YF
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74   YTEDDELASLVRLWPKLDSEKKKNILQHL  102
            + EDDE A L  L  ++ +E KKN+L++L
Sbjct  70   FCEDDESAELACLIHRMSPEEKKNLLKDL  98

29) ambt_05270 in NC_015554


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 75.2 bits (266),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 43/75 (58%), Positives = 59/75 (79%), Gaps = 0/75 (0%)

Query  5   ESPFPKRLKQARKDRGLSQKQLGILSGMDEFSASARMNQYEKGVHSPDFKTVKALAEVLK  64
           ++P+P RLK+ARK   LSQK LG+  GMDE SAS+RMNQYEKG H+PD +T+K +A+ L 
Sbjct  4   QNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELG  63

Query  65  VPTAFLYCEEDDLAE  79
           VP  +++CE+D+ AE
Sbjct  64  VPLNYFFCEDDESAE  78

30) ECO103_0860 in NC_013353


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 75.0 bits (265),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 38/88 (44%), Positives = 67/88 (77%), Gaps = 0/88 (0%)

Query  5   RLKEARRRAGLTQEKLGILAGLDEASASTRINQYEKGKHSPNFETVSNLAKVLNVPVSFL  64
           RLKEAR++A L+Q  LG+  G+DE+SAS R+NQYEKGKH+P+ +T+  +A  L VP++++
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YTPEDDLAQFILLFDSLSESDRKKILDQ  92
           +  +D+ A++  L++ +S  ++K++L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLKD  97

31) ECO111_0885 in NC_013364


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 75.0 bits (265),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 38/88 (44%), Positives = 67/88 (77%), Gaps = 0/88 (0%)

Query  5   RLKEARRRAGLTQEKLGILAGLDEASASTRINQYEKGKHSPNFETVSNLAKVLNVPVSFL  64
           RLKEAR++A L+Q  LG+  G+DE+SAS R+NQYEKGKH+P+ +T+  +A  L VP++++
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YTPEDDLAQFILLFDSLSESDRKKILDQ  92
           +  +D+ A++  L++ +S  ++K++L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLKD  97

32) G655_10975 in NC_020912


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 72.6 bits (256),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 43/87 (50%), Positives = 63/87 (73%), Gaps = 0/87 (0%)

Query  5   RLKAARIRAGYSQKQLGMLVGMDEFSASARMNQYERERHSPNMRTSEQLAMVLQVPMAYL  64
           RLK AR +A  SQK LG+ +GMDE SAS+RMNQYE+ +H+P+++T   +A  L VP+ Y+
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YCPEDELAELILKVSSLTPEFKKELTR  91
           +C +DE AEL   +  ++PE KK+L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLK  96

33) PADK2_10530 in NC_018080


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 72.6 bits (256),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 43/87 (50%), Positives = 63/87 (73%), Gaps = 0/87 (0%)

Query  5   RLKAARIRAGYSQKQLGMLVGMDEFSASARMNQYERERHSPNMRTSEQLAMVLQVPMAYL  64
           RLK AR +A  SQK LG+ +GMDE SAS+RMNQYE+ +H+P+++T   +A  L VP+ Y+
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YCPEDELAELILKVSSLTPEFKKELTR  91
           +C +DE AEL   +  ++PE KK+L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLK  96

34) PLES_22941 in NC_011770


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 72.6 bits (256),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 43/87 (50%), Positives = 63/87 (73%), Gaps = 0/87 (0%)

Query  5   RLKAARIRAGYSQKQLGMLVGMDEFSASARMNQYERERHSPNMRTSEQLAMVLQVPMAYL  64
           RLK AR +A  SQK LG+ +GMDE SAS+RMNQYE+ +H+P+++T   +A  L VP+ Y+
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YCPEDELAELILKVSSLTPEFKKELTR  91
           +C +DE AEL   +  ++PE KK+L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLK  96

35) PA2780 in NC_002516


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 72.6 bits (256),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 43/87 (50%), Positives = 63/87 (73%), Gaps = 0/87 (0%)

Query  5   RLKAARIRAGYSQKQLGMLVGMDEFSASARMNQYERERHSPNMRTSEQLAMVLQVPMAYL  64
           RLK AR +A  SQK LG+ +GMDE SAS+RMNQYE+ +H+P+++T   +A  L VP+ Y+
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YCPEDELAELILKVSSLTPEFKKELTR  91
           +C +DE AEL   +  ++PE KK+L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLK  96

36) M062_14810 in NC_021577


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 72.6 bits (256),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 43/87 (50%), Positives = 63/87 (73%), Gaps = 0/87 (0%)

Query  5   RLKAARIRAGYSQKQLGMLVGMDEFSASARMNQYERERHSPNMRTSEQLAMVLQVPMAYL  64
           RLK AR +A  SQK LG+ +GMDE SAS+RMNQYE+ +H+P+++T   +A  L VP+ Y+
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YCPEDELAELILKVSSLTPEFKKELTR  91
           +C +DE AEL   +  ++PE KK+L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLK  96

37) PA14_28130 in NC_008463


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 72.6 bits (256),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 43/87 (50%), Positives = 63/87 (73%), Gaps = 0/87 (0%)

Query  5   RLKAARIRAGYSQKQLGMLVGMDEFSASARMNQYERERHSPNMRTSEQLAMVLQVPMAYL  64
           RLK AR +A  SQK LG+ +GMDE SAS+RMNQYE+ +H+P+++T   +A  L VP+ Y+
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YCPEDELAELILKVSSLTPEFKKELTR  91
           +C +DE AEL   +  ++PE KK+L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLK  96

38) Rahaq2_1041 in NC_016818


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 71.5 bits (252),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 43/75 (58%), Positives = 57/75 (76%), Gaps = 0/75 (0%)

Query  5   RLKEARLRAGLSQYKLGVLAGVDEASSSARMNQYEKGKHQPDPETVKRIAKVLDVPVAYL  64
           RLKEAR +A LSQ  LGV  G+DE+S+S+RMNQYEKGKH PD +T+K IA  L+VP+ Y+
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YAEEDDLAALIIAFH  79
           + E+D+ A L   +H
Sbjct  70  FCEDDESAELACLIH  84

39) Dda3937_03235 in NC_014500


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 71.3 bits (251),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 41/98 (42%), Positives = 67/98 (69%), Gaps = 0/98 (0%)

Query  15   HDIFSQRLKDARLLRGLSQKGLGIAAGIDEFVASARINRYEKGVHEANIVTAKRLAEALN  74
            ++ ++ RLK+AR    LSQK+LG+  G+DE  AS+R+N+YEKG H +++ T K +A+ L 
Sbjct  4    QNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELG  63

Query  75   VPLAYFYADDDNLAKMILLFADLPKEQQARLLASLENK  112
            VPL YF+ +DD+ A +  L+  ++ E++  LL  L +K
Sbjct  64   VPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDLISK  101

40) Dda3937_03233 in NC_014500


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 70.2 bits (247),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 42/95 (45%), Positives = 65/95 (69%), Gaps = 0/95 (0%)

Query  6   NYHDVFCQRLKQARLAKGLSQKKLGIAAGIDEFVASTRINRYEKGVHEASIDTAQQLADA  65
           ++++ +  RLK+AR    LSQK LG+  G+DE  AS R+N+YEKG H + ++T + +AD 
Sbjct  2   SFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADE  61

Query  66  LDVPLAFFYTADDELAELMLAFLRLSPEKRAEILT  100
           L+VPL +F+  DDE AEL   + R+SPE + ++L 
Sbjct  62  LGVPLNYFFCEDDESAELACLIHRMSPEEKKNLLK  96

41) Dd586_3971 in NC_013592


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 70.2 bits (247),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 39/95 (42%), Positives = 66/95 (70%), Gaps = 0/95 (0%)

Query  8    HDVFSQRLKDARLLRGLSQKGLGIAAGIDEFVASARINRYEKGVHEANIVTAKRLAEALN  67
            ++ ++ RLK+AR    LSQK+LG+  G+DE  AS+R+N+YEKG H +++ T K +A+ L 
Sbjct  4    QNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELG  63

Query  68   VPLAYFYADDDNLAKMILLFADLPREQQESVLASL  102
            VPL YF+ +DD+ A +  L+  ++ E++ ++L  L
Sbjct  64   VPLNYFFCEDDESAELACLIHRMSPEEKKNLLKDL  98

42) BURPS668_3494 in NC_009074


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 69.4 bits (244),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 39/90 (44%), Positives = 63/90 (70%), Gaps = 1/90 (1%)

Query  5   RLRAARQRANIPQDRLGVQIGLDESTASVRVSRYETGTHTPPFGIAVKLAQALHLPAAYF  64
           RL+ AR++A+++Q  LGV+IG+DES+AS R+++YE G HTP       +A+ L +P  YF
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YCEDDELADLVLAWVRLPKTDRKH-IKAMI  93
           +CEDDE A+L     R++  ++K+ +K +I
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLKDLI  99

43) Spro_1541 in NC_009832


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 68.9 bits (242),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 63/86 (74%), Gaps = 0/86 (0%)

Query  5   RLKEARLKAGLSQEKLGILAGIDEASASARMNQYEKGKHTPDFEMACSLAKVLGIPESYF  64
           RLKEAR KA LSQ  LG+  G+DE+SAS+RMNQYEKGKHTPD +    +A  LG+P +YF
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YTKDDLMAQMILLFNHLDKNDKIEMI  90
           +  DD  A++  L++++  ++K +++
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLL  95

44) Dd586_3973 in NC_013592


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 68.4 bits (240),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 39/94 (42%), Positives = 64/94 (69%), Gaps = 0/94 (0%)

Query  6   NYHDVFCQRLKQARLAKGLSQKKLGIAAGIDEFVASTRINRYEKGVHEASIDTAQQLSDA  65
           ++++ +  RLK+AR    LSQK LG+  G+DE  AS R+N+YEKG H + ++T + ++D 
Sbjct  2   SFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADE  61

Query  66  LDVPLAFFYTADDQLAELMLAFWEMPPEKRAEIL  99
           L+VPL +F+  DD+ AEL   +  M+PE + ++L
Sbjct  62  LGVPLNYFFCEDDESAELACLIHRMSPEEKKNLL  95

45) ES15_3405 in NC_017933


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 67.9 bits (238),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 41/91 (46%), Positives = 62/91 (69%), Gaps = 4/91 (4%)

Query  14   RLKTAREAKGLSQKKLGILAGIDEFVASARINRYEKGVHQASIEIARKLADALAVPLAYF  73
            RLK AR    LSQK LG+  G+DE  AS+R+N+YEKG H + ++  + +AD L+VPL YF
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74   YTEDDELAEL--LLRWKQLDQDAKNAILSHI  102
            + EDDE AEL  L+++  +  + K+ +L ++
Sbjct  70   FCEDDESAELACLIHR--MSPEEKKNLLKDL  98

46) Smlt2450 in NC_010943


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 67.6 bits (237),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 39/89 (44%), Positives = 63/89 (71%), Gaps = 4/89 (4%)

Query  14  RLKQARLHTGLSQKELGIRAGLDPHVASPRINQYERGKHEPMLEIAERLAQALGIPAAFL  73
           RLK+AR  + LSQK LG+R G+D   ASPR+NQYE+GKH P ++    +A+ LG+P  ++
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74  YTDDDLLAKL--LLRWGSLSKQQKRELVK  100
           + +DD  A L  L+++  +S ++K++L+K
Sbjct  70  FCEDDESAELACLIHR--MSPEEKKNLLK  96

47) CTU_05290 in NC_013282


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 67.1 bits (235),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 41/91 (46%), Positives = 62/91 (69%), Gaps = 4/91 (4%)

Query  14   RLKTAREAKGLSQKKLGILAGIDEFVASARINRYEKGVHQASIEIARKLADALAVPLAYF  73
            RLK AR    LSQK LG+  G+DE  AS+R+N+YEKG H + ++  + +AD L+VPL YF
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74   YTEDDELAEL--LLRWKQLDQDVKNAILSHI  102
            + EDDE AEL  L+++  +  + K+ +L ++
Sbjct  70   FCEDDESAELACLIHR--MSPEEKKNLLKDL  98

48) PC1_4121 in NC_012917


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 66.3 bits (232),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 40/92 (44%), Positives = 62/92 (68%), Gaps = 0/92 (0%)

Query  14   RLKDARLLRGLSQKGLGIAAGIDEFVASARINRYEKGVHEANLVTASRLAEALDVPLAYF  73
            RLK+AR    LSQK+LG+  G+DE  AS+R+N+YEKG H +++ T   +A+ L+VPL YF
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74   YAADDNLARMILIFAELSVAEQAVLLNSLENK  105
            +  DD+ A +  ++  +S  E+  LL+ L +K
Sbjct  70   FCEDDESAELACLIHRMSPEEKKNLLKDLISK  101

49) Bphy_6926 in NC_010625


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 65.5 bits (229),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 39/91 (43%), Positives = 59/91 (65%), Gaps = 1/91 (1%)

Query  13   RLRAARLQADIPQDKLGVKIGLDEGTASVRVSRYETGVHEPPFGIAVKLAAALRIPAAYF  72
            RL+ AR +A ++Q  LGV+IG+DE++AS R+++YE G H P       +A  L +P  YF
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  73   YCEDDELADVVLAWGRLTKAERKR-LKPLIT  102
            +CEDDE A++     R++  E+K  LK LI+
Sbjct  70   FCEDDESAELACLIHRMSPEEKKNLLKDLIS  100

50) bgla_1g14380 in NC_015381


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 65.2 bits (228),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 39/91 (43%), Positives = 62/91 (69%), Gaps = 0/91 (0%)

Query  2   SVLALRLKDARQRAGLSQERLGIEAGLDPMSASTRMNRYELGKRVPDVELVTRLAVVLKV  61
           + ++LRLK+AR++A LSQ  LG+  G+D  SAS RMN+YE GK+ PDV+ +  +A  L V
Sbjct  5   NPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGV  64

Query  62  PAAYFYAVDDVEAEMLLKFHGLTKSQQQSVL  92
           P  YF+  DD  AE+   +H ++  +++++L
Sbjct  65  PLNYFFCEDDESAELACLIHRMSPEEKKNLL  95

51) PC1_4123 in NC_012917


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 65.0 bits (227),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 40/94 (43%), Positives = 65/94 (70%), Gaps = 0/94 (0%)

Query  6   NYHDVFCQRLKQARLAKGLSQKKLGIAAGIDEFVASTRINRYEKGVHEASIETAQQLAEA  65
           ++++ +  RLK+AR    LSQK LG+  G+DE  AS R+N+YEKG H + ++T + +A+ 
Sbjct  2   SFQNPIPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADE  61

Query  66  LDVPLAYFYTENDelaemmlaflalSPEKRAEVL  99
           L+VPL YF+ E+DE AE+   +  +SPE + ++L
Sbjct  62  LGVPLNYFFCEDDESAELACLIHRMSPEEKKNLL  95

52) Vapar_5932 in NC_012792


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 65.0 bits (227),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 35/85 (42%), Positives = 59/85 (70%), Gaps = 0/85 (0%)

Query  1   MRLARLAAGLPQDKLGVKAGLDDGTASARISRYESGVHEPNISFAHRLADELGVPAPYFY  60
           ++ AR  A L+Q  LGV+ G+D+++AS+R+++YE G H P++     +ADELGVP  YF+
Sbjct  11  LKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYFF  70

Query  61  AADDELAKLILWFGQLNAKQRKSLL  85
             DDE A L   + ++++ ++K+LL
Sbjct  71  CEDDESAELACLIHRMSPEEKKNLL  95

53) XACM_1661 in NC_016010


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 63.9 bits (223),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 39/89 (44%), Positives = 61/89 (69%), Gaps = 0/89 (0%)

Query  20   RLRHARQKAELTQEALGVAAGLAPEVARTRINRYEKGVNECDLRTAKRLADALGMPLAAF  79
            RL++AR+KA L+Q ALGV  G+    A  R+N+YEKG +  D++T K +AD LG+PL  F
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  80   FAETDEVADAIQALAKLSVEEQRKVVAEL  108
            F E DE A+    + ++S EE+++++ +L
Sbjct  70   FCEDDESAELACLIHRMSPEEKKNLLKDL  98

54) Bphyt_0144 in NC_010681


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 63.4 bits (221),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 43/89 (49%), Positives = 63/89 (71%), Gaps = 0/89 (0%)

Query  12  FPRRLKQARQRSGLTQEQLGIQAGIDEFSASTRVNQYEKGKHTPAIQTSQRLARALLVPT  71
           +P RLK+AR+++ L+Q  LG++ G+DE SAS R+NQYEKGKHTP +QT + +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  72  GFLYEdddllasllaiaGRLSKEKKRALL  100
            +++ +DD  A L  +  R+S E K+ LL
Sbjct  67  NYFFCEDDESAELACLIHRMSPEEKKNLL  95

55) CSSP291_15905 in NC_020260


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 63.4 bits (221),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 40/91 (44%), Positives = 61/91 (68%), Gaps = 4/91 (4%)

Query  14   RLKTAREAKGLSQKKLGILAGIDEFVASARINRYEKGVHQASIEIACKLADALAVPLAYF  73
            RLK AR    LSQK LG+  G+DE  AS+R+N+YEKG H + ++    +AD L+VPL YF
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74   YTEDDQLAEL--LLRWKQLDQDAKNAILSHI  102
            + EDD+ AEL  L+++  +  + K+ +L ++
Sbjct  70   FCEDDESAELACLIHR--MSPEEKKNLLKDL  98

56) Pecwa_4406 in NC_013421


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 62.6 bits (218),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 39/86 (46%), Positives = 61/86 (71%), Gaps = 0/86 (0%)

Query  14  RLKDARLLRGLSQKGLGIAAGIDEFVASARINRYEKGVYEASIETAQQLAEALDVPLAYF  73
           RLK+AR    LSQK+LG+  G+DE  AS+R+N+YEKG   + ++T + +A+ L+VPL YF
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74  YTENDelaemmlaflalSPEKRAEIL  99
           + E+DE AE+   +  +SPE + ++L
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLL  95

57) ECENHK_15595 in NC_018405


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 38/72 (53%), Positives = 53/72 (74%), Gaps = 0/72 (0%)

Query  2   LPHRLKAARLKAGLSQQKLGILAGIDEATASARMNQYEKGIHTPDFALACKLAEVLSIPV  61
           +P RLK AR KA LSQ+ LG+  G+DE++AS+RMNQYEKG HTPD      +A+ L++P+
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTIEDDLAE  73
            YF+  +D+ AE
Sbjct  67  NYFFCEDDESAE  78

58) Bxe_C0429 in NC_007953


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 43/89 (49%), Positives = 64/89 (72%), Gaps = 0/89 (0%)

Query  12  FPRRLKQARLRSGLTQEQLGIHAGIDEFSASARVNQYEKGKHTPAIQTSQRLARALLVPT  71
           +P RLK+AR ++ L+Q  LG++ G+DE SAS+R+NQYEKGKHTP +QT + +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  72  GFLYEdddllanllaiaGRLSKEKKRALL  100
            +++ +DD  A+L  +  R+S E K+ LL
Sbjct  67  NYFFCEDDESAELACLIHRMSPEEKKNLL  95

59) R2APBS1_1684 in NC_020541


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 61.8 bits (215),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 36/89 (41%), Positives = 58/89 (66%), Gaps = 0/89 (0%)

Query  14   RLKQARQDAGLSQKELGILAGLDPFVASTRINRYEQDVHATDQATAKRLAKALGVPLAYL  73
            RLK+AR+ A LSQK LG+  G+D   AS R+N+YE++ H+ D  T K +A  LGVPL Y+
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74   YADNERLARMIRAFSALDATEQERLLKEI  102
            + +++  A +   +  + + E+  LLK++
Sbjct  70   FCEDDESAELACLIHRMSPEEKKNLLKDL  98

60) Dd586_3769 in NC_013592


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 61.0 bits (212),  Expect = 5e-11, Method: Compositional matrix adjust.
 Identities = 37/73 (51%), Positives = 51/73 (70%), Gaps = 0/73 (0%)

Query  2   LPHRLKAARLMAGLSQERLGILAGIDEATASARMNQYERGIHTPDFELARRLAAVLHVPA  61
           +P RLK AR  A LSQ  LG+  G+DE++AS+RMNQYE+G HTPD +  + +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTVEDDLAEM  74
            YF+  +D+ AE+
Sbjct  67  NYFFCEDDESAEL  79

61) Bphy_6784 in NC_010625


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 61.0 bits (212),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 33/81 (41%), Positives = 55/81 (68%), Gaps = 1/81 (1%)

Query  23   IPQDTLGVKIGLDEGTASARVSRYETGVHEPPFGIAVKLAAALRIPAAYFYCEDDELADV  82
            ++Q +LGV+IG+DE++AS+R+++YE G H P       +A  L +P  YF+CEDDE A++
Sbjct  20   LSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYFFCEDDESAEL  79

Query  83   VLVWGRLTKSERKR-IKPLIT  102
              +  R++  E+K  +K LI+
Sbjct  80   ACLIHRMSPEEKKNLLKDLIS  100

62) Dd703_3225 in NC_012880


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 60.0 bits (208),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 35/72 (49%), Positives = 51/72 (71%), Gaps = 0/72 (0%)

Query  2   IPERLKNARLRANLTQEQLGVLAGIGEETAYSRLSQYESGTHTPSFKTVCAFAHALNVPE  61
           IP RLK+AR +A+L+Q  LGV  G++E +A +R++QYE G HTP  +T+  +A+ L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  SYFYTVDDSFAE  73
           +YF+  DD  AE
Sbjct  67  NYFFCEDDESAE  78

63) Q7S_15685 in NC_017047


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 60.0 bits (208),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 39/86 (46%), Positives = 56/86 (66%), Gaps = 1/86 (1%)

Query  2   IPHRLKSARTKARLTQEKLGVLAGIDESTARSRVSQYENGTYSPNFDTMCHFARVLNVPE  61
           IP RLK AR KA+L+Q  LGV  G+DES+A +R++QYE+G  +P+ +T+  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYIIDDAFAEEVLVLYAAFNPSEK  87
            YF+  DD  + E+  L    +P EK
Sbjct  67  NYFFCEDDE-SAELACLIHRMSPEEK  91

64) Rahaq_3111 in NC_015061


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 60.0 bits (208),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 39/86 (46%), Positives = 56/86 (66%), Gaps = 1/86 (1%)

Query  2   IPHRLKSARTKARLTQEKLGVLAGIDESTARSRVSQYENGTYSPNFDTMCHFARVLNVPE  61
           IP RLK AR KA+L+Q  LGV  G+DES+A +R++QYE+G  +P+ +T+  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYIIDDAFAEEVLVLYAAFNPSEK  87
            YF+  DD  + E+  L    +P EK
Sbjct  67  NYFFCEDDE-SAELACLIHRMSPEEK  91

65) plu4472 in NC_005126


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 59.7 bits (207),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 37/73 (51%), Positives = 50/73 (69%), Gaps = 0/73 (0%)

Query  2   LPHRLKAARLKAGLSQERLGILAGIDEATASTRMNQYERGIHTPDFALACRLASVMGIPA  61
           +P RLK AR KA LSQ  LG+  G+DE++AS RMNQYE+G HTPD      +A  +G+P 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYVVEDDLAEI  74
            YF+  +D+ AE+
Sbjct  67  NYFFCEDDESAEL  79

66) XAC1499 in NC_003919


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 59.7 bits (207),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 38/91 (42%), Positives = 62/91 (69%), Gaps = 0/91 (0%)

Query  1    MKKRRKTLRLSQKALGVLMGLPEDVAGVRINRYERAVHECDSETAQKMADALGVSLAYLY  60
            +K  RK  +LSQKALGV +G+ E  A+ R+N+YE++ H  D +T + +AD LGV+L Y++
Sbjct  11   LKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYFF  70

Query  61   AETDELAELIQEFMQLPAKDQHALLADIKSR  91
             E DE AEL   + ++++ ++  LL D+ S+
Sbjct  71   CEDDESAELACLIHRMSPEEKKNLLKDLISK  101

67) XCAW_02829 in NC_020815


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 59.7 bits (207),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 38/91 (42%), Positives = 62/91 (69%), Gaps = 0/91 (0%)

Query  1    MKKRRKTLRLSQKALGVLMGLPEDVAGVRINRYERAVHECDSETAQKMADALGVSLAYLY  60
            +K  RK  +LSQKALGV +G+ E  A+ R+N+YE++ H  D +T + +AD LGV+L Y++
Sbjct  11   LKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYFF  70

Query  61   AETDELAELIQEFMQLPAKDQHALLADIKSR  91
             E DE AEL   + ++++ ++  LL D+ S+
Sbjct  71   CEDDESAELACLIHRMSPEEKKNLLKDLISK  101

68) RORB6_16000 in NC_021066


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 59.5 bits (206),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 53/74 (72%), Gaps = 0/74 (0%)

Query  2   LPHRLKEARLRTGLSQQKLGILAGIDEATASARMNQYERGIHTPDFALACRLADVLKIPA  61
           +P RLKEAR ++ LSQ+ LG+  G+DE++AS+RMNQYE+G HTPD      +AD L +P 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTVEDDLAEVV  75
            YF+  +D+ AE+ 
Sbjct  67  NYFFCEDDESAELA  80

69) plu4475 in NC_005126


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 59.2 bits (205),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 38/73 (53%), Positives = 51/73 (70%), Gaps = 0/73 (0%)

Query  2   LPHRLKAARLKAGLSQERLGILAGIDEATASARMNQYERGIHTPDFELACRLASVLHVPA  61
           +P RLK AR KA LSQ  LG+  G+DE++AS+RMNQYE+G HTPD +    +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYAVEDDLAEM  74
            YF+  +D+ AE+
Sbjct  67  NYFFCEDDESAEL  79

70) Rahaq2_3140 in NC_016818


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 59.2 bits (205),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 50/72 (70%), Gaps = 0/72 (0%)

Query  2   IPHRLKSARAKARLTQEKLGVLAGIDESTARSRVSQYENGTYSPNFDTMCHFARVLNVPE  61
           IP RLK AR KA+L+Q  LGV  G+DES+A +R++QYE+G  +P+ +T+  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYIIDDAFAE  73
            YF+  DD  AE
Sbjct  67  NYFFCEDDESAE  78

71) Dd703_3425 in NC_012880


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 57.4 bits (198),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 32/74 (44%), Positives = 50/74 (68%), Gaps = 0/74 (0%)

Query  2   LPIRLKTARLRANLTQEKLGVLAGIEEATARSRISQYESGIHRPTFEMICAFAKVLNVPE  61
           +P+RLK AR +A+L+Q  LGV  G++E++A +R++QYE G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTVDDDFAEVV  75
            YF+  DD+ AE+ 
Sbjct  67  NYFFCEDDESAELA  80

72) EPYR_00430 in NC_017390


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 57.1 bits (197),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 38/74 (52%), Positives = 52/74 (71%), Gaps = 0/74 (0%)

Query  2   LPHRLKEARLKKGLSQQKLGVLAGIDEATASARMNQYERGIHVPDFELVCRLAAVLDVPS  61
           +P RLKEAR K  LSQ+ LGV  G+DE++AS+RMNQYE+G H PD + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYLYTLEDELAALV  75
            Y++  +DE A L 
Sbjct  67  NYFFCEDDESAELA  80

73) EpC_04120 in NC_012214


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 57.1 bits (197),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 38/74 (52%), Positives = 52/74 (71%), Gaps = 0/74 (0%)

Query  2   LPHRLKEARLKKGLSQQKLGVLAGIDEATASARMNQYERGIHVPDFELVCRLAAVLDVPS  61
           +P RLKEAR K  LSQ+ LGV  G+DE++AS+RMNQYE+G H PD + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYLYTLEDELAALV  75
            Y++  +DE A L 
Sbjct  67  NYFFCEDDESAELA  80

74) EAM_3011 in NC_013971


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 57.1 bits (197),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 52/74 (71%), Gaps = 0/74 (0%)

Query  2   LPHRLKEARLKKGLSQQKLGVLAGIDEATASARMNQYERGIHVPDFELVCRLAAVLDVPS  61
           +P RLKEAR K  LSQ+ LGV  G+DE++AS+RMNQYE+G H PD + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYLYTLEDDLAALV  75
            Y++  +D+ A L 
Sbjct  67  NYFFCEDDESAELA  80

75) EAMY_0409 in NC_013961


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 57.1 bits (197),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 52/74 (71%), Gaps = 0/74 (0%)

Query  2   LPHRLKEARLKKGLSQQKLGVLAGIDEATASARMNQYERGIHVPDFELVCRLAAVLDVPS  61
           +P RLKEAR K  LSQ+ LGV  G+DE++AS+RMNQYE+G H PD + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYLYTLEDDLAALV  75
            Y++  +D+ A L 
Sbjct  67  NYFFCEDDESAELA  80

76) XACM_3184 in NC_016010


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 56.8 bits (196),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 34/82 (42%), Positives = 55/82 (68%), Gaps = 1/82 (1%)

Query  25   SQVELGALLGMNEKAASSRLSRYERGEREPDHETLAALSDVLGVPEAYFHAGSDVLAEVI  84
            SQ  LG  +GM+E +AS+R+++YE+G + PD +TL  ++D LGVP  YF    D  AE+ 
Sbjct  21   SQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYFFCEDDESAELA  80

Query  85   LLVARL-PEERQQAVLDLVKRH  105
             L+ R+ PEE+++ + DL+ + 
Sbjct  81   CLIHRMSPEEKKNLLKDLISKK  102

77) KPN_02949 in NC_009648


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 36/76 (48%), Positives = 50/76 (66%), Gaps = 0/76 (0%)

Query  8   RLKISRVRADLTQAELGVLAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYF  67
           RLK +R +A L+Q  LGV  G+DE SAS+R++ YEK  H+PD + +  +A  L+VP  YF
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  68  YAVDDDLAELILQYHR  83
           +  DD+ AEL    HR
Sbjct  70  FCEDDESAELACLIHR  85

78) Dd586_1468 in NC_013592


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 29/72 (41%), Positives = 48/72 (67%), Gaps = 0/72 (0%)

Query  2   VPQRLRAARERAKISQEELAIAAGISEETGYSRMSHYENGRHKPKFELICTFAKILDVPE  61
           +P RL+ AR +AK+SQ  L++  G+ E ++ +RM++YE+G+H P  + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  GYFYTLDDSFAE  73
            YF+  DD  AE
Sbjct  67  NYFFCEDDESAE  78

79) xccb100_1037 in NC_010688


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 32/79 (41%), Positives = 53/79 (68%), Gaps = 1/79 (1%)

Query  25   SQVELGALLGMNEKSASSRLSRYERGEREPDHETLAALSNALGVPPAYFHASSDVLAEVI  84
            SQ  LG  +GM+E SAS+R+++YE+G + PD +TL  +++ LGVP  YF    D  AE+ 
Sbjct  21   SQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYFFCEDDESAELA  80

Query  85   LLVARLPADRQMAVL-ELI  102
             L+ R++++ +  +L +LI
Sbjct  81   CLIHRMSPEEKKNLLKDLI  99

80) Dda3937_03632 in NC_014500


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 32/73 (44%), Positives = 50/73 (69%), Gaps = 0/73 (0%)

Query  2   LPIRLKTARLQANLTQEKLGVLAGIEEATARSRISQYESGIHRPTFEMMCAFAKVLNVPE  61
           +P+RLK AR +A+L+Q  LGV  G++E++A +R++QYE G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTVDDDFAEI  74
            YF+  DD+ AE+
Sbjct  67  NYFFCEDDESAEL  79

81) Dd586_0877 in NC_013592


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 32/73 (44%), Positives = 50/73 (69%), Gaps = 0/73 (0%)

Query  2   LPIRLKTARLQANLTQEKLGVLAGIEEATARSRISQYESGIHRPTFEMMCAFAKVLNVPE  61
           +P+RLK AR +A+L+Q  LGV  G++E++A +R++QYE G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTVDDDFAEI  74
            YF+  DD+ AE+
Sbjct  67  NYFFCEDDESAEL  79

82) Dda3937_02762 in NC_014500


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 56.3 bits (194),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 29/72 (41%), Positives = 48/72 (67%), Gaps = 0/72 (0%)

Query  2   VPQRLRAARERAKISQEELAIAAGISEETGYSRMSHYENGRHKPKFELICTFAKILDVPE  61
           +P RL+ AR +AK+SQ  L++  G+ E ++ +RM++YE+G+H P  + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  GYFYTLDDSFAE  73
            YF+  DD  AE
Sbjct  67  NYFFCEDDESAE  78

83) PCC21_037320 in NC_018525


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 56.1 bits (193),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 31/73 (43%), Positives = 46/73 (64%), Gaps = 0/73 (0%)

Query  2   IPIRLKSARLNVHLTQEELGTLAGIEEETARSRVSQYENGIHRPTFEMMCAFAKVLNVPE  61
           IP+RLK AR +  L+Q  LG   G++E +A +R++QYE+G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  GYFYTVDDKFAEM  74
            YF+  DD  AE+
Sbjct  67  NYFFCEDDESAEL  79

84) PCC21_037330 in NC_018525


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 55.8 bits (192),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 33/72 (46%), Positives = 49/72 (69%), Gaps = 0/72 (0%)

Query  13  LPTRLKAARLRAKITQEKLGVLSGIEEATARSRVSQYESGTHRPTFEMMCSFARVLNVPE  72
           +P RLK AR +AK++Q  LGV  G++E++A +R++QYE G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  73  SYFYTLDDEFAE  84
           +YF+  DDE AE
Sbjct  67  NYFFCEDDESAE  78

85) SARI_03129 in NC_010067


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 55.5 bits (191),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 33/72 (46%), Positives = 49/72 (69%), Gaps = 0/72 (0%)

Query  2   IPKRLKEARLRAKLTQEKLGVLAGIEEATAYSRLSHYENGTHKPTFELVCEFARVLNVPE  61
           IP RLKEAR +AKL+Q  LGV  G++E++A +R+++YE+G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTVDDGFAD  73
            YF+  DD  A+
Sbjct  67  NYFFCEDDESAE  78

86) CFSAN002050_16840 in NC_021818


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 55.5 bits (191),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 32/72 (45%), Positives = 49/72 (69%), Gaps = 0/72 (0%)

Query  16  LPVRLKIARLRANLTQEKLGVLAGIEEATARSRISQYESGIHRPTFEMMCAFARVLNVPE  75
           +P+RLK AR +A+L+Q  LGV  G++E++A +R++QYE G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  76  CYFYTVDDDFAE  87
            YF+  DD+ AE
Sbjct  67  NYFFCEDDESAE  78

87) SeHA_C2922 in NC_011083


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 55.3 bits (190),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 36/77 (47%), Positives = 49/77 (64%), Gaps = 0/77 (0%)

Query  5   RLKISRVRADLTQAELGALAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYF  64
           RLK +R +A L+Q  LG   G+DE SAS+R++ YEK  H+PD + +  +A  L+VP  YF
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  65  YAVDDELAELILQYHRF  81
           +  DDE AEL    HR 
Sbjct  70  FCEDDESAELACLIHRM  86

88) Dda3937_02761 in NC_014500


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/72 (46%), Positives = 50/72 (70%), Gaps = 0/72 (0%)

Query  2   IPKRLKEARLHAKLTQEKLGVLAGLEEATAYSRLSHYENGTHKPTFELVCEFARVLDVPE  61
           IP RLKEAR  AKL+Q  LGV  G++E++A +R+++YE+G H P  + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYIVDDQFAQ  73
            YF+  DD+ A+
Sbjct  67  NYFFCEDDESAE  78

89) Dd586_1467 in NC_013592


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/72 (46%), Positives = 50/72 (70%), Gaps = 0/72 (0%)

Query  2   IPKRLKEARLHAKLTQEKLGVLAGLEEATAYSRLSHYENGTHKPTFELVCEFARVLDVPE  61
           IP RLKEAR  AKL+Q  LGV  G++E++A +R+++YE+G H P  + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYIVDDQFAQ  73
            YF+  DD+ A+
Sbjct  67  NYFFCEDDESAE  78

90) Dd1591_1497 in NC_012912


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 33/72 (46%), Positives = 50/72 (70%), Gaps = 0/72 (0%)

Query  2   IPKRLKEARLHAKLTQEKLGVLAGLEEATAYSRLSHYENGTHKPTFELVCEFARVLDVPE  61
           IP RLKEAR  AKL+Q  LGV  G++E++A +R+++YE+G H P  + +  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYIVDDQFAQ  73
            YF+  DD+ A+
Sbjct  67  NYFFCEDDESAE  78

91) Spro_4126 in NC_009832


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 54.5 bits (187),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 33/72 (46%), Positives = 48/72 (67%), Gaps = 0/72 (0%)

Query  2   VPQRLKSARQRAGLTQEKLGVLAGIDEATARSRISQYESGTYTPTFTTMCALARVLDVPE  61
           +P RLK AR++A L+Q  LGV  G+DE++A +R++QYE G  TP   T+  +A  L+VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYILDDAFSE  73
            YF+  DD  +E
Sbjct  67  NYFFCEDDESAE  78

92) CFSAN002050_16845 in NC_021818


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 54.0 bits (185),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 31/74 (42%), Positives = 48/74 (65%), Gaps = 0/74 (0%)

Query  2   LPVRLKTARLHARLTQEKLGVLAGIEEETARSRVSQYEGGVHRPTFEMMCAFARVLNVPE  61
           +P+RLK AR  A+L+Q  LGV  G++E +A +R++QYE G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYAVNDNFAEMV  75
            YF+  +D+ AE+ 
Sbjct  67  NYFFCEDDESAELA  80

93) Dda3937_04485 in NC_014500


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 53.7 bits (184),  Expect = 9e-09, Method: Compositional matrix adjust.
 Identities = 31/74 (42%), Positives = 47/74 (64%), Gaps = 0/74 (0%)

Query  2   LPARLKTARLRADLTQEKLGVLAGIEEETARSRVSQYEGGIHRPTFEMMCAFAKVLNVPE  61
           +P RLK AR +A L+Q  LGV  G++E +A +R++QYE G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTVNDDFAEMV  75
            YF+  +D+ AE+ 
Sbjct  67  NYFFCEDDESAELA  80

94) Dd586_0878 in NC_013592


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 30/73 (42%), Positives = 47/73 (65%), Gaps = 0/73 (0%)

Query  2   LPARLKTARLRADLTQEKLGVLAGIEEETARSRVSQYEGGIHRPTFEMMCAFAKVLNVPE  61
           +P RLK AR +A L+Q  LGV  G++E +A +R++QYE G H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYTVNDDFADM  74
            YF+  +D+ A++
Sbjct  67  NYFFCEDDESAEL  79

95) Bphyt_6488 in NC_010676


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 53.4 bits (183),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 36/88 (41%), Positives = 54/88 (62%), Gaps = 0/88 (0%)

Query  12  RLKEARLEAGLSQKRLGIEAGLDPFVASTRINRYELGVHKVDHTFASRLATVLKVPVAFL  71
           RLKEAR  A LSQK LG+  G+D   AS R+N+YE G H  D      +A  L VP+ ++
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  72  YAEDSDLAQLILIFGRLSKRKRADLLQN  99
           + ED + A+L  ++ R+S   + +LL++
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLKD  97

96) Dd703_3224 in NC_012880


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 52.9 bits (181),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 33/72 (46%), Positives = 48/72 (67%), Gaps = 0/72 (0%)

Query  2   IPKRLKAARLRANLTQEKLGVLAGIEEATAYSRLSHYENGTHKPTFELACEFARVLNVPE  61
           IP RLK AR +A+L+Q  LGV  G++E++A +R+++YE+G H P  +    +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  CYFYIVDDEFAE  73
            YF+  DDE AE
Sbjct  67  NYFFCEDDESAE  78

97) Bphyt_0145 in NC_010681


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 39/88 (45%), Positives = 58/88 (66%), Gaps = 0/88 (0%)

Query  14   RLKEARVRSCLTQEQLGINAGIDEFSASARINQYERGKHLPHLGMGQRLARALHVPTSFL  73
            RLKEAR ++ L+Q  LG+  G+DE SAS+R+NQYE+GKH P++   + +A  L VP +++
Sbjct  10   RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  74   YEEDDllaallvaaarlTRSRKKVLLAN  101
            + EDD  A L     R++   KK LL +
Sbjct  70   FCEDDESAELACLIHRMSPEEKKNLLKD  97

98) BUPH_02631 in NC_018695


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 52.1 bits (178),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 36/88 (41%), Positives = 52/88 (60%), Gaps = 0/88 (0%)

Query  12  RLKEARLEAGLSQKQLGIEAGLDPFVASTRINRYELGIHKVDYALAGRLATVLRLPVAFF  71
           RLKEAR  A LSQK LG+  G+D   AS R+N+YE G H  D      +A  L +P+ +F
Sbjct  10  RLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPLNYF  69

Query  72  YAEDPELARLIQIFGRLPKRKKADILSH  99
           + ED E A L  ++ R++   K ++L +
Sbjct  70  FCEDDESAELACLIHRMSPEEKKNLLKD  97

99) SARI_03130 in NC_010067


> NC_002505_P1|2|G2|15640206|NP_229833.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|2108..2416|-|VC0176|transcriptional 
regulator
Length=102

 Score = 48.4 bits (164),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 29/72 (41%), Positives = 44/72 (62%), Gaps = 0/72 (0%)

Query  2   IPKRLRIARELADMSQEDLAAAAGVSEETGSSRISHYEHGRHRPKFELVCQLARVLNVPE  61
           IP RL+ AR  A +SQ  L+   G+ E ++S+R+++YE G+H P  + +  +A  L VP 
Sbjct  7   IPLRLKEARKKAKLSQKALGVRIGMDESSASPRMNQYEKGKHTPDVQTLKLIADELGVPL  66

Query  62  GYFYTLDDSFAE  73
            YF+  DD  AE
Sbjct  67  NYFFCEDDESAE  78