Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
cag island protein |
NC_000921 (Helicobacter pylori J99) |
9e-79 |
100 |
|
cag island protein |
NC_017371 (Helicobacter pylori Gambia94/24) |
5e-77 |
97 |
|
cag island protein |
NC_017374 (Helicobacter pylori 2017) |
3e-76 |
97 |
|
cag pathogenicity island protein |
NC_017381 (Helicobacter pylori 2018) |
3e-76 |
97 |
|
cag island protein |
NC_017357 (Helicobacter pylori 908) |
3e-76 |
97 |
|
cag island protein |
NC_017742 (Helicobacter pylori PeCan18) |
1e-71 |
96 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_000921_P1' AND ph.id_pai_orf='2' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc