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PAthogenisity Island DataBase (PAI DB)

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Homologs of tcpH gene of FJ209007

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) O3Y_03845 in NC_016944


> FJ209007|2|G2|218158643|ACK75620.1|Vibrio_cholerae_M1567|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  219 bits (816),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 133/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWT+RYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTARYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

2) tcpH in NC_012578


> FJ209007|2|G2|218158643|ACK75620.1|Vibrio_cholerae_M1567|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  219 bits (816),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 133/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWT+RYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTARYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

3) VCD_003501 in NC_012668


> FJ209007|2|G2|218158643|ACK75620.1|Vibrio_cholerae_M1567|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  219 bits (816),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 133/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWT+RYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTARYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

4) tcpH in NC_016445


> FJ209007|2|G2|218158643|ACK75620.1|Vibrio_cholerae_M1567|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  219 bits (816),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 133/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWT+RYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTARYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

5) VC0827 in NC_002505


> FJ209007|2|G2|218158643|ACK75620.1|Vibrio_cholerae_M1567|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  219 bits (816),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 133/136 (98%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWT+RYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTARYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

6) tcpH in NC_012582


> FJ209007|2|G2|218158643|ACK75620.1|Vibrio_cholerae_M1567|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  194 bits (720),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 132/136 (98%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWggaaglfvvalgvtlIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWT+RYQTLPDPSSQKLNLIPDYS+SNVSRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTARYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KQLTAEKMWFSCQSDF  136
            KQLTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

7) tcpH in NC_009457


> FJ209007|2|G2|218158643|ACK75620.1|Vibrio_cholerae_M1567|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  194 bits (720),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 132/136 (98%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWggaaglfvvalgvtlIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWT+RYQTLPDPSSQKLNLIPDYS+SNVSRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTARYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KQLTAEKMWFSCQSDF  136
            KQLTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136