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PAthogenisity Island DataBase (PAI DB)

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Homologs of tcpH gene of FJ209006

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) O3Y_03845 in NC_016944


> FJ209006|2|G2|218158637|ACK75615.1|Vibrio_cholerae_M1121|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  222 bits (826),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

2) tcpH in NC_012578


> FJ209006|2|G2|218158637|ACK75615.1|Vibrio_cholerae_M1121|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  222 bits (826),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

3) VCD_003501 in NC_012668


> FJ209006|2|G2|218158637|ACK75615.1|Vibrio_cholerae_M1121|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  222 bits (826),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

4) tcpH in NC_016445


> FJ209006|2|G2|218158637|ACK75615.1|Vibrio_cholerae_M1121|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  222 bits (826),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

5) VC0827 in NC_002505


> FJ209006|2|G2|218158637|ACK75615.1|Vibrio_cholerae_M1121|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  222 bits (826),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

6) tcpH in NC_012582


> FJ209006|2|G2|218158637|ACK75615.1|Vibrio_cholerae_M1121|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 132/136 (98%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWggaaglfvvalgvtlIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYS+SNVSRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KQLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

7) tcpH in NC_009457


> FJ209006|2|G2|218158637|ACK75615.1|Vibrio_cholerae_M1121|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 132/136 (98%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWggaaglfvvalgvtlIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYS+SNVSRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KQLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136