Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of tcpH gene of FJ209005

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) O3Y_03845 in NC_016944


> FJ209005|2|G2|218158631|ACK75610.1|Vibrio_cholerae_M1118|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  217 bits (807),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 131/136 (97%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKS+TTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSRTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

2) tcpH in NC_012578


> FJ209005|2|G2|218158631|ACK75610.1|Vibrio_cholerae_M1118|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  217 bits (807),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 131/136 (97%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKS+TTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSRTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

3) VCD_003501 in NC_012668


> FJ209005|2|G2|218158631|ACK75610.1|Vibrio_cholerae_M1118|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  217 bits (807),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 131/136 (97%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKS+TTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSRTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

4) tcpH in NC_016445


> FJ209005|2|G2|218158631|ACK75610.1|Vibrio_cholerae_M1118|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  217 bits (807),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 131/136 (97%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKS+TTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSRTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

5) VC0827 in NC_002505


> FJ209005|2|G2|218158631|ACK75610.1|Vibrio_cholerae_M1118|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  217 bits (807),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 131/136 (97%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKS+TTRYQTLPDPSSQKLNLIPDYSQSN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSRTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

6) tcpH in NC_012582


> FJ209005|2|G2|218158631|ACK75610.1|Vibrio_cholerae_M1118|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  193 bits (717),  Expect = 5e-51, Method: Compositional matrix adjust.
 Identities = 134/136 (99%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWggaaglfvvalgvtlIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKS+TTRYQTLPDPSSQKLNLIPDYS+SNVSRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSRTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KQLTAEKMWFSCQSDF  136
            KQLTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136

7) tcpH in NC_009457


> FJ209005|2|G2|218158631|ACK75610.1|Vibrio_cholerae_M1118|+|792..1202|tcpH|-|toxin 
co-regulated pilus biosynthesis protein 
H
Length=136

 Score =  193 bits (717),  Expect = 5e-51, Method: Compositional matrix adjust.
 Identities = 134/136 (99%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWggaaglfvvalgvtlIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKS+TTRYQTLPDPSSQKLNLIPDYS+SNVSRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSRTTRYQTLPDPSSQKLNLIPDYSQSNVSRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KQLTAEKMWFSCQSDF  136
            KQLTAEKMWFSCQSDF
Sbjct  121  KQLTAEKMWFSCQSDF  136