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Homologs of HP0521B gene of AY330643

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPAG1_0496
( YP_627237.1 )

HP0521B-like protein

NC_008086
(Helicobacter pylori HPAG1)

8e-103

2) HPB14_04040
( YP_006219523.1 )

HP0521B-like protein

NC_017733
(Helicobacter pylori HUP-B14)

7e-93

3) cag2
( YP_003728745.1 )

cag pathogenicity island protein epsilon

NC_014256
(Helicobacter pylori B8)

4e-82

• Sequence Alignments

1) HPAG1_0496 in NC_008086


> AY330643|2|G2|37811879|AAR03944.1|Helicobacter_pylori_Du23:2|+|731..1468|-|HP0521B|HP0521B 
protein
Length=245

 Score =  365 bits (1373),  Expect = 8e-103, Method: Compositional matrix adjust.
 Identities = 235/247 (96%), Positives = 240/247 (98%), Gaps = 2/247 (0%)

Query  6    IRENLTNLGVLVVCYSLHDLHKQPINSFSLKTSNIIGFSIFICEHAQKKIMQKMASRHTD  65
            +REN+ NLGVLVV  SLHDLHKQPINSFSLKTSNIIGFSIFICEHAQK IMQK+ASRHTD
Sbjct  1    MRENFKNLGVLVVYCSLHDLHKQPINSFSLKTSNIIGFSIFICEHAQKEIMQKVASRHTD  60

Query  66   DSNKFNIKPKEKIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKL  125
            DSNKFNIKPKEKIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKL
Sbjct  61   DSNKFNIKPKEKIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKL  120

Query  126  DQGVGINFQESLGYNLSALQKKAISLLKISPNQILELVQKLYMKGHRHISYPTEYLFEET  185
            DQGVG+NFQESLGYNLS+LQKKAISLLKISPNQILELVQKLYMKG  HISYPTEYLFEET
Sbjct  121  DQGVGLNFQESLGYNLSTLQKKAISLLKISPNQILELVQKLYMKG--HISYPTEYLFEET  178

Query  186  FKKNLYKIYKDSENDCFSKNVADEEKVLLGFPNRKFTPNEFFYSCITYLKCKGILSLYQS  245
            FKKNLYKIYKDSENDCFSKNVADEEKVLLGFPNRKFTPNE FYSCITYLKCKGILSLYQS
Sbjct  179  FKKNLYKIYKDSENDCFSKNVADEEKVLLGFPNRKFTPNESFYSCITYLKCKGILSLYQS  238

Query  246  EKKETNV  252
            EKKETNV
Sbjct  239  EKKETNV  245

2) HPB14_04040 in NC_017733


> AY330643|2|G2|37811879|AAR03944.1|Helicobacter_pylori_Du23:2|+|731..1468|-|HP0521B|HP0521B 
protein
Length=245

 Score =  332 bits (1247),  Expect = 7e-93, Method: Compositional matrix adjust.
 Identities = 211/220 (96%), Positives = 215/220 (98%), Gaps = 0/220 (0%)

Query  6    MRENFKNLGVLVVYYSLHDPHKRPINSFSLKTSNIIGFSIFICEHAQKEIMQKVASRHTD  65
            MRENFKNLGVLVVY SLHD HK+PINSFSLKTSNIIGFSIFICEHAQKEIMQKVASRHTD
Sbjct  1    MRENFKNLGVLVVYCSLHDLHKQPINSFSLKTSNIIGFSIFICEHAQKEIMQKVASRHTD  60

Query  66   DSNKFNIKPKEKIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKL  125
            DSNKFNIKPKEKIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKL
Sbjct  61   DSNKFNIKPKEKIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKL  120

Query  126  DQGVWINFQESLGYNLSTLQKKAISLLKISPNQILELVQKLYMKGHISYPTEYLFEETFK  185
            DQGV +NFQESLGYNLSTLQKKAISLLKISPNQILELVQKLYMKGHISYPTEYLFEETFK
Sbjct  121  DQGVGLNFQESLGYNLSTLQKKAISLLKISPNQILELVQKLYMKGHISYPTEYLFEETFK  180

Query  186  KNLYKIYKDSENDCFNKNVADEEKVLLEFPSRKFTPNELF  225
            KNLYKIYKDSENDCF+KNVADEEKVLL FP+RKFTPNE F
Sbjct  181  KNLYKIYKDSENDCFSKNVADEEKVLLGFPNRKFTPNESF  220

3) cag2 in NC_014256


> AY330643|2|G2|37811879|AAR03944.1|Helicobacter_pylori_Du23:2|+|731..1468|-|HP0521B|HP0521B 
protein
Length=245

 Score =  296 bits (1109),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 199/235 (85%), Positives = 212/235 (91%), Gaps = 2/235 (0%)

Query  1    MVYYSLHDPHKRPINSFSLKTSNIIGFSIFYLRTRTKKIIQKMASRHTDDSNKFNIKPKE  60
            +VY SLHD HK+PINSFSLKTSNIIGFSIF      K I+QK+ASRHTDDSNKFNIKPKE
Sbjct  12   VVYCSLHDLHKQPINSFSLKTSNIIGFSIFICEHAQKEIMQKVASRHTDDSNKFNIKPKE  71

Query  61   KIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKLDQGVGLNFQES  120
            KIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKLDQGVGLNFQES
Sbjct  72   KIDENVINALETSLKSKGVVSETLESIKEAKNNKEYENLSNRGFLRAKLDQGVGLNFQES  131

Query  121  IGYNLSALQKKAISLLKISPNQILELVQKLYMKGRISYPTEYLFEETFKKNLYKIYKDSE  180
            +GYNLS+LQKKAISLLKISPNQILELVQKLYMKG+ISYPTEYLFEETFKKNLYKIYKDSE
Sbjct  132  LGYNLSTLQKKAISLLKISPNQILELVQKLYMKGHISYPTEYLFEETFKKNLYKIYKDSE  191

Query  181  NDCFNKNVDDEEKVLLGFPNRKFTPNEFFTATSLTLNARE-FCLYINLKKKETNV  234
            NDCF+KNV DEEKVLLGFPNRKFTPNE F +    L+ +  + LY +  KKETNV
Sbjct  192  NDCFSKNVADEEKVLLGFPNRKFTPNESFYSCITYLKCKGILSLYQS-EKKETNV  245