Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of cag3 gene of AY330636

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) cag3
( YP_005783491.1 )

cag pathogenicity island protein

NC_017374
(Helicobacter pylori 2017)

1e-172

2) cag3
( YP_005791333.1 )

cag pathogenicity island protein

NC_017381
(Helicobacter pylori 2018)

1e-172

3) cag3
( YP_005765024.1 )

cag pathogenicity island protein

NC_017357
(Helicobacter pylori 908)

1e-172

4) HPPN135_02555
( YP_005789728.1 )

cag pathogenicity island protein 3

NC_017379
(Helicobacter pylori Puno135)

1e-171

5) HPAG1_0497
( YP_627238.1 )

cag pathogenicity island protein 3

NC_008086
(Helicobacter pylori HPAG1)

3e-171

6) HPPN120_02530
( YP_005788184.1 )

cag pathogenicity island protein (cag delta, cag3)

NC_017378
(Helicobacter pylori Puno120)

4e-169

7) HPSH169_02670
( YP_006225726.1 )

cag pathogenicity island protein Cag delta

NC_017740
(Helicobacter pylori Shi169)

4e-169

8) HPB14_04045
( YP_006219524.1 )

cag pathogenicity island protein 3

NC_017733
(Helicobacter pylori HUP-B14)

7e-169

9) HP0522
( NP_207318.1 )

cag pathogenicity island protein (cag3)

NC_000915
(Helicobacter pylori 26695)

9e-169

10) C694_02690
( YP_006934444.1 )

cag pathogenicity island protein (cag3)

NC_018939
(Helicobacter pylori 26695)

9e-169

11) C695_02690
( YP_006893009.1 )

cag pathogenicity island protein (cag3)

NC_018937
(Helicobacter pylori Rif1)

9e-169

12) C730_02690
( YP_006936050.1 )

cag pathogenicity island protein (cag3)

NC_018938
(Helicobacter pylori Rif2)

9e-169

13) HPV225_0517
( YP_005763450.1 )

cag pathogenicity island protein

NC_017355
(Helicobacter pylori v225d)

9e-169

14) HPLT_02585
( YP_005772661.1 )

cag pathogenicity island protein 3

NC_017362
(Helicobacter pylori Lithuania75)

2e-168

15) K751_03230
( YP_007983626.1 )

sodium:calcium antiporter

NC_021218
(Helicobacter pylori UM066)

2e-168

16) HPPC18_02495
( YP_006228765.1 )

cag island protein

NC_017742
(Helicobacter pylori PeCan18)

2e-168

17) HPGAM_02665
( YP_005780256.1 )

cag island protein

NC_017371
(Helicobacter pylori Gambia94/24)

2e-168

18) HPCU_02845
( YP_005766645.1 )

cag pathogenicity island protein (cag delta, cag3)

NC_017358
(Helicobacter pylori Cuz20)

5e-168

19) K747_06670
( YP_007979521.1 )

sodium:calcium antiporter

NC_021215
(Helicobacter pylori UM032)

5e-168

20) K748_07920
( YP_008337438.1 )

sodium:calcium antiporter

NC_021882
(Helicobacter pylori UM298)

5e-168

21) K749_01310
( YP_007980059.1 )

sodium:calcium antiporter

NC_021216
(Helicobacter pylori UM299)

5e-168

22) HPSH_04315
( YP_001910328.1 )

cag pathogenicity island protein Cag delta

NC_010698
(Helicobacter pylori Shi470)

6e-168

23) HMPREF0462_0899
( YP_005785466.1 )

cag pathogenicity island protein

NC_017375
(Helicobacter pylori 83)

8e-168

24) HPELS_03945
( YP_005424909.1 )

cag pathogenicity island protein Delta

NC_017063
(Helicobacter pylori ELS37)

8e-168

25) cag3
( YP_007536657.1 )

cag pathogenicity island protein

NC_020508
(Helicobacter pylori OK113)

8e-168

26) MWE_1002
( YP_006338490.1 )

cag pathogenicity island protein (cag delta, cag3)

NC_017926
(Helicobacter pylori XZ274)

9e-168

27) HPSH112_04440
( YP_006227582.1 )

cag pathogenicity island protein Cag delta

NC_017741
(Helicobacter pylori Shi112)

1e-167

28) orf8
( NP_223189.1 )

cag island protein

NC_000921
(Helicobacter pylori J99)

1e-167

29) cag3
( YP_002266110.1 )

cag pathogenicity island protein 3

NC_011333
(Helicobacter pylori G27)

2e-167

30) HPSJM_02675
( YP_003928448.1 )

cag pathogenicity island protein 3

NC_014560
(Helicobacter pylori SJM180)

2e-167

31) HPSAT_04170
( YP_005768478.1 )

cag pathogenicity island protein (cag delta, cag3)

NC_017359
(Helicobacter pylori Sat464)

2e-167

32) cag3
( YP_003728744.1 )

cag pathogenicity island protein delta

NC_014256
(Helicobacter pylori B8)

1e-166

33) HPSH417_02485
( YP_006224144.1 )

cag pathogenicity island protein Cag delta

NC_017739
(Helicobacter pylori Shi417)

1e-166

34) cag3
( YP_005779068.1 )

cag pathogenicity island protein

NC_017368
(Helicobacter pylori F16)

6e-166

35) HPPC_02565
( YP_003926803.1 )

cag pathogenicity island protein (cag3)

NC_014555
(Helicobacter pylori PeCan4)

8e-166

36) cag3
( YP_005774547.1 )

cag pathogenicity island protein

NC_017365
(Helicobacter pylori F30)

9e-166

37) cag3
( YP_002301163.1 )

cag pathogenicity island protein Delta

NC_011498
(Helicobacter pylori P12)

2e-165

38) HPKB_0820
( YP_005762328.1 )

cag pathogenicity island protein 3

NC_017354
(Helicobacter pylori 52)

2e-165

39) HMPREF4655_21083
( YP_005770170.1 )

cag pathogenicity island protein

NC_017360
(Helicobacter pylori 35A)

2e-165

40) cag3
( YP_007538441.1 )

cag pathogenicity island protein

NC_020509
(Helicobacter pylori OK310)

4e-165

41) cag3
( YP_005777266.1 )

cag pathogenicity island protein

NC_017367
(Helicobacter pylori F57)

7e-165

42) HPIN_04290
( YP_005782167.1 )

cag pathogenicity island protein 3

NC_017372
(Helicobacter pylori India7)

1e-164

43) cag3
( YP_005793189.1 )

cag pathogenicity island protein 3

NC_017382
(Helicobacter pylori 51)

1e-164

44) K750_04170
( YP_007982190.1 )

sodium:calcium antiporter

NC_021217
(Helicobacter pylori UM037)

2e-164

45) cag3
( YP_005775725.1 )

cag pathogenicity island protein

NC_017366
(Helicobacter pylori F32)

4e-164

46) HPSNT_02690
( YP_005786678.1 )

cag pathogenicity island protein (cag3)

NC_017376
(Helicobacter pylori Santal49)

3e-163

• Sequence Alignments

1) cag3 in NC_017374


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  599 bits (2263),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 437/460 (95%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATSVSLMGLLISNALYTKEISEADKVIkatketketkqeakRLKKEAKQRQQIPD  60
            MFRKLAT+VSL+GLL SN+LY+KEISEADKVIKATKETKETK+EAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   NKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            +KKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+++PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNSHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTN  240
            VPKRSDPN+HTLDKGASIDE+KLFEQQK+MYFNYANDVICRPNDEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqetelakYKLKDlenqkklkaleaelkkknakkPRVVEVPISPKTSDS  360
            EREKKLLAEKEKQE+ELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTS+S
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPINLEDLRNLEEEIKSYY  420
            DETMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+PIN +DLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

2) cag3 in NC_017381


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  599 bits (2263),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 437/460 (95%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATSVSLMGLLISNALYTKEISEADKVIkatketketkqeakRLKKEAKQRQQIPD  60
            MFRKLAT+VSL+GLL SN+LY+KEISEADKVIKATKETKETK+EAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   NKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            +KKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+++PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNSHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTN  240
            VPKRSDPN+HTLDKGASIDE+KLFEQQK+MYFNYANDVICRPNDEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqetelakYKLKDlenqkklkaleaelkkknakkPRVVEVPISPKTSDS  360
            EREKKLLAEKEKQE+ELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTS+S
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPINLEDLRNLEEEIKSYY  420
            DETMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+PIN +DLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

3) cag3 in NC_017357


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  599 bits (2263),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 436/460 (95%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATSVSLMGLLISNALYTKEISEADKVIkatketketkqeakRLKKEAKQRQQIPD  60
            MFRKLAT+VSL+GLL SN+LY+KEISEADKVIKATKETKETK+EAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   NKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSTLKDKTYLYAMDLLDYNNYLSI  120
            +KKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNS+LKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+++PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNSHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTN  240
            VPKRSDPN+HTLDKGASIDE+KLFEQQK+MYFNYANDVICRPNDEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqetelakYKLKDlenqkklkaleaelkkknakkPRVVEVPISPKTSDS  360
            EREKKLLAEKEKQE+ELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTS+S
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPINLEDLRNLEEEIKSYY  420
            DETMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+PIN +DLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

4) HPPN135_02555 in NC_017379


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  596 bits (2250),  Expect = 1e-171, Method: Compositional matrix adjust.
 Identities = 450/460 (98%), Positives = 458/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeselakYKLKDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQE+ELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPINPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+PINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGINLYAKIKNDPYKEGMLCGYESIQKLLSP  460
            IKSNGLCYANGI+LYAKIKNDPYKEGMLCGYES+Q+LLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

5) HPAG1_0497 in NC_008086


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  594 bits (2244),  Expect = 3e-171, Method: Compositional matrix adjust.
 Identities = 454/460 (99%), Positives = 457/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATSVSLIGLLTSNTLCAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLAT+VSLIGLLTSNTL AKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGAAIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGA+IDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDLENQkklkalkaelkkknakkPRVVEVPISPKTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKAL AELKKKNAKKPRVVEVPISPKTSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRNLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

6) HPPN120_02530 in NC_017378


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  587 bits (2217),  Expect = 4e-169, Method: Compositional matrix adjust.
 Identities = 443/454 (98%), Positives = 451/454 (99%), Gaps = 0/454 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaqlakYKLKDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEA+LAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESI  454
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESV  454

7) HPSH169_02670 in NC_017740


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  587 bits (2218),  Expect = 4e-169, Method: Compositional matrix adjust.
 Identities = 448/460 (98%), Positives = 457/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDNLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+N+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANETQPSPYATQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANE+QPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekklltekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLL+EKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPINPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+PINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

8) HPB14_04045 in NC_017733


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  586 bits (2214),  Expect = 7e-169, Method: Compositional matrix adjust.
 Identities = 451/460 (99%), Positives = 459/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSTLKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNS+LKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGAAIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTN  240
            VPKRSDPNAHTLDKGA+IDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPVSPQTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVP+SP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRNLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

9) C694_02690 in NC_018939


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  586 bits (2213),  Expect = 9e-169, Method: Compositional matrix adjust.
 Identities = 449/460 (98%), Positives = 458/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKKMYFNYANDVICRPDDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQK+MYFNYANDVICRP+DEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLVanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQL+ANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPVSPQTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVP+SP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYTNGINLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCY+NGI+LY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

10) HP0522 in NC_000915


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  586 bits (2213),  Expect = 9e-169, Method: Compositional matrix adjust.
 Identities = 449/460 (98%), Positives = 458/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKKMYFNYANDVICRPDDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQK+MYFNYANDVICRP+DEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLVanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQL+ANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPVSPQTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVP+SP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYTNGINLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCY+NGI+LY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

11) C695_02690 in NC_018937


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  586 bits (2213),  Expect = 9e-169, Method: Compositional matrix adjust.
 Identities = 449/460 (98%), Positives = 458/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKKMYFNYANDVICRPDDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQK+MYFNYANDVICRP+DEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLVanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQL+ANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPVSPQTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVP+SP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYTNGINLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCY+NGI+LY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

12) C730_02690 in NC_018938


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  586 bits (2213),  Expect = 9e-169, Method: Compositional matrix adjust.
 Identities = 449/460 (98%), Positives = 458/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKKMYFNYANDVICRPDDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQK+MYFNYANDVICRP+DEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLVanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQL+ANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPVSPQTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVP+SP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYTNGINLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCY+NGI+LY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

13) HPV225_0517 in NC_017355


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  586 bits (2213),  Expect = 9e-169, Method: Compositional matrix adjust.
 Identities = 450/460 (98%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatkktketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATK TKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENNKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPEN+KEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPINPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+PINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

14) HPLT_02585 in NC_017362


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  585 bits (2208),  Expect = 2e-168, Method: Compositional matrix adjust.
 Identities = 453/460 (99%), Positives = 458/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQHQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQ+QQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGAAIDENKLFEQQKRAYFNYANDVICRPDDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGA+IDENKLFEQQKR YFNYANDVICRP+DEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPKTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYNKKSPININDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSY+KKSPIN NDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYARIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLYA+IKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

15) K751_03230 in NC_021218


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  585 bits (2208),  Expect = 2e-168, Method: Compositional matrix adjust.
 Identities = 444/460 (97%), Positives = 455/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLISNTLYTKEISEADRVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLL SNTLY+KEISEAD+VIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekerqeaelakYKLKDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKE+QEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

16) HPPC18_02495 in NC_017742


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  585 bits (2210),  Expect = 2e-168, Method: Compositional matrix adjust.
 Identities = 437/460 (95%), Positives = 457/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATSVSLMGLLISNALYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLAT+VSL+GLL SN+LYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   NKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            +KKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+++PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTN  240
            VPKRSDPNAHTLDKGASIDE+KLFEQQK+MYFNYANDVICRPNDEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKEANNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKE+NNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqetelakYKLKDlenqkklkaleaelkkkntkkPRVVEVPIPPKTSDS  360
            EREKKLLAEKEKQE+ELAKYKLKDLENQKKLKALEAELKKKN+KKPRVVEVPI+PKTS+S
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPINLEDLRSLEEEIKSYY  420
            DETMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+PIN +DLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  VKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQKLLSP  460
            +KSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQ+LLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

17) HPGAM_02665 in NC_017371


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  584 bits (2207),  Expect = 2e-168, Method: Compositional matrix adjust.
 Identities = 435/460 (95%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLAISVSLMGLLISNALYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLA +VSL+GLL SN+LYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   NKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            +KKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+++PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTN  240
            VPKRSDPNAHTLDKGASIDE+KLFEQQK+MYFNYANDVICRPNDEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKEANNTNEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKE+NN+NEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqetelakYKLKDlenqkklkaleaelkkkntkkPRVVEVPIPPKTSDS  360
            EREKKLLAEKEKQE+ELAKYKLKDLENQKKLKALEAELKKKN+KKPRVVEVPI+PKTS+S
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPINLEDLRNLEEEIKSYY  420
            DETMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+PIN +DLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  VKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460
            +KSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

18) HPCU_02845 in NC_017358


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2203),  Expect = 5e-168, Method: Compositional matrix adjust.
 Identities = 447/460 (98%), Positives = 455/460 (99%), Gaps = 0/460 (0%)

Query  1    MFGKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MF KLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENIPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANETQPSPYATQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANE+QPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekklltekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLL+EKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPINPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+PINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

19) K747_06670 in NC_021215


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2203),  Expect = 5e-168, Method: Compositional matrix adjust.
 Identities = 446/460 (97%), Positives = 453/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLISNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLL SNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllvekekqeaelakyklkDLENQkklkvleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLL EKEKQEAELAKYKLKDLENQKKLK LEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

20) K748_07920 in NC_021882


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2203),  Expect = 5e-168, Method: Compositional matrix adjust.
 Identities = 446/460 (97%), Positives = 453/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLISNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLL SNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllvekekqeaelakyklkDLENQkklkvleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLL EKEKQEAELAKYKLKDLENQKKLK LEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

21) K749_01310 in NC_021216


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2203),  Expect = 5e-168, Method: Compositional matrix adjust.
 Identities = 446/460 (97%), Positives = 453/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLISNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLL SNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllvekekqeaelakyklkDLENQkklkvleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLL EKEKQEAELAKYKLKDLENQKKLK LEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

22) HPSH_04315 in NC_010698


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2202),  Expect = 6e-168, Method: Compositional matrix adjust.
 Identities = 446/460 (97%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFGKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MF KLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDNLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+N+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSTTQKPNIIAPYSLYRLKETNNANETQPSPYAAQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANE+QPSPYA+QTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekklltekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLL+EKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPINPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+PINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

23) HMPREF0462_0899 in NC_017375


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2200),  Expect = 8e-168, Method: Compositional matrix adjust.
 Identities = 447/460 (98%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeaRQHQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+Q+QQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

24) HPELS_03945 in NC_017063


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2200),  Expect = 8e-168, Method: Compositional matrix adjust.
 Identities = 448/460 (98%), Positives = 457/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATSVSLIGLLISNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLAT+VSLIGLL SNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPSN  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMP++
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVIQKPNIVAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSV QKPNI+APYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPVSPQTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVP+SP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRNLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

25) cag3 in NC_020508


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2200),  Expect = 8e-168, Method: Compositional matrix adjust.
 Identities = 447/460 (98%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeaRQHQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+Q+QQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

26) MWE_1002 in NC_017926


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  583 bits (2200),  Expect = 9e-168, Method: Compositional matrix adjust.
 Identities = 446/460 (97%), Positives = 457/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeaRQHQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+Q+QQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSTLKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNS+LKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGINLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGI+LY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

27) HPSH112_04440 in NC_017741


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  582 bits (2197),  Expect = 1e-167, Method: Compositional matrix adjust.
 Identities = 450/460 (98%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFGKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MF KLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDNLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+N+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPINPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+PINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

28) orf8 in NC_000921


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  582 bits (2198),  Expect = 1e-167, Method: Compositional matrix adjust.
 Identities = 434/460 (95%), Positives = 455/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATSVSLISLLISNALYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLAT+VSLI+LL SN+LYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   NKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKNKTYLYAMDLLDYNNYLSI  120
            +KKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALK+KTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+++PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTN  240
            VPKRSDPNAHTLDKGASIDE+KLFEQQK+MYFNYANDVICRPNDEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqetelakYKLKDlenqkklkaleaelkkkntkkPRVVEVPIPPKTSDS  360
            EREKKLLAEKEKQE+ELAKYKLKDLENQKKLKALEAELKKKN+KKPRVVEVPI+PKTS+S
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVIKEKENYNGLLVDKETTIKRSYKGTLISENSYSKKTPINLEDLRSLEEEIKSYY  420
            DETMRV+KEKENYNGLLVDKETTIKRSY GTLISENSYSKK+PIN +DLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  VKSNGLCYANGINLYVKIKNDPYKEGMLCGYESVQKLLSP  460
            +KSNGLCYANGI+LY KIKNDPYKEGMLCGYESVQ+LLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

29) cag3 in NC_011333


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  582 bits (2197),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 456/460 (99%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADkvikatketketkkevkrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKE KRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSTTQKPNIIAPYSLYRLKEKNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKE NNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPKTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

30) HPSJM_02675 in NC_014560


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  582 bits (2197),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 443/454 (98%), Positives = 447/454 (99%), Gaps = 0/454 (0%)

Query  1    MFRKLATAVLLMGLLISNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAV L+GLL SNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVKQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSV QKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqevelakYKLKDlenqkklkaleaelkkknakkPRVVEVPISPKTGNS  360
            EREKKLLAEKEKQE ELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKT+NS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESV  454
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYESV
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESV  454

31) HPSAT_04170 in NC_017359


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  581 bits (2196),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 448/460 (98%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  29   MFGKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  88
            MF KLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  89   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  148
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  149  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDNLPYAQATFLR  208
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+N+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  209  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  268
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  269  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTTPENSKEKLIEELIANSQLIanee  328
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQT+PENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  329  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  388
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  389  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPINPNDLRSLEEEIKSYY  448
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+PINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  449  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  488
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

32) cag3 in NC_014256


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  579 bits (2187),  Expect = 1e-166, Method: Compositional matrix adjust.
 Identities = 450/460 (98%), Positives = 459/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLISNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLL SNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGAAIDENKLFEQQKKMYFNYANDVICRPDDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGA+IDENKLFEQQK+MYFNYANDVICRP+DEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANETQPSPYATQTAPESSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANE+QPSPYATQTAPE+SKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPQTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

33) HPSH417_02485 in NC_017739


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  579 bits (2185),  Expect = 1e-166, Method: Compositional matrix adjust.
 Identities = 447/460 (98%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYTKEISEADKVIkatketketkkeakrlkkeakQRQQIHD  60
            MFRKLATAVSLIGLLTSNTLY+KEISEADKVIKATKETKETKKEAKRLKKEAKQRQQI D
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYAAQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYA+QTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGWLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNG LVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLYAKIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

34) cag3 in NC_017368


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  576 bits (2177),  Expect = 6e-166, Method: Compositional matrix adjust.
 Identities = 447/460 (98%), Positives = 457/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYTKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLLTSNTLY+KEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEDLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINE++PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSTTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

35) HPPC_02565 in NC_014555


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  576 bits (2175),  Expect = 8e-166, Method: Compositional matrix adjust.
 Identities = 439/460 (96%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQHQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQ+QQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKIN+++PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYANDVICRPDDEVCSPLRDEMVAMPTN  240
            VPKRSDPNAHTLDKGASIDE+KLFEQQK+MYFNYANDVICRP+DEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLVanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQL+ANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPIPHQTSDS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPI+ +TS+S
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DKTMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPLNPNDLRRLEEEIKSYY  420
            D TMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+P+NPNDLR LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYSNGINLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCY+NGI+LY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

36) cag3 in NC_017365


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  576 bits (2175),  Expect = 9e-166, Method: Compositional matrix adjust.
 Identities = 445/460 (97%), Positives = 455/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYTKEISEADRVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLLTSNTLY+KEISEAD+VIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllvekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLL EKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

37) cag3 in NC_011498


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  575 bits (2172),  Expect = 2e-165, Method: Compositional matrix adjust.
 Identities = 453/460 (99%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATSVSLIGLLTSNTLCAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLAT+VSLIGLLTSNTL AKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNVHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPN HTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVKQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSV QKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPQTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

38) HPKB_0820 in NC_017354


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  574 bits (2169),  Expect = 2e-165, Method: Compositional matrix adjust.
 Identities = 452/460 (99%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKVLNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILK LNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPKTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  FETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRNLEEEIKSYY  420
             ETMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460
            IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

39) HMPREF4655_21083 in NC_017360


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  574 bits (2169),  Expect = 2e-165, Method: Compositional matrix adjust.
 Identities = 448/460 (98%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSTTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

40) cag3 in NC_020509


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  574 bits (2166),  Expect = 4e-165, Method: Compositional matrix adjust.
 Identities = 447/460 (98%), Positives = 455/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLISNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLL SNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

41) cag3 in NC_017367


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  573 bits (2164),  Expect = 7e-165, Method: Compositional matrix adjust.
 Identities = 446/460 (97%), Positives = 456/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VSKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            V+KRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNEPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKN+PYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

42) HPIN_04290 in NC_017372


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  572 bits (2161),  Expect = 1e-164, Method: Compositional matrix adjust.
 Identities = 444/454 (98%), Positives = 448/454 (99%), Gaps = 2/454 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkeakQRQQIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEDMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINE+MPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYKLKETNNANEAQPS--ATQTAPENSKEKLIEELIANSQLIanee  298
            DSVTQKPNIIAPYSLY+LKETNNANEAQPS  ATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  299  erekkllaekekqeaelakyklkDLENQkklkalevelkkknakkPRVVEVPISPKTGNS  358
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALE ELKKKNAKKPRVVEVPISPKT+NS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  359  FETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRNLEEEIKSYY  418
             ETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLR+LEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  419  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESV  452
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYESV
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESV  454

43) cag3 in NC_017382


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  572 bits (2161),  Expect = 1e-164, Method: Compositional matrix adjust.
 Identities = 444/460 (97%), Positives = 455/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLISNTLYAKEISEADRVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLL SNTLYAKEISEAD+VIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNSHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPN+HTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANETQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANE+QPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNP  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSN+
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
            DETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

44) K750_04170 in NC_021217


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  571 bits (2157),  Expect = 2e-164, Method: Compositional matrix adjust.
 Identities = 442/460 (97%), Positives = 457/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYTKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLLTSNTLY+KEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKKMYFNYANDVICRPDDEVCSPLRDEMVAMPTN  240
            VPKRSDPNAHTLDKGASIDENKLFEQQK+MYFNYANDVICRP+DEVCSPLRDEMVAMPT+
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANETQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANE+QPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPIPHQTSDS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPI+ +TS+S
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  DETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKTPINLEDLRSLEEEIKSYY  420
            DETMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKK+PIN +DLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  VKSNGLCYSNGINLYVKIKNDPYKEGMLCGYESVQNLLSP  460
            +KSNGLCY+NGI+LY KIKNDPYKEGMLCGYESVQNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

45) cag3 in NC_017366


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  570 bits (2154),  Expect = 4e-164, Method: Compositional matrix adjust.
 Identities = 446/460 (97%), Positives = 455/460 (99%), Gaps = 0/460 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYTKEISEADRVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLLTSNTLY+KEISEAD+VIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQY SVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENLPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINEN+PYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQKR YFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSATQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DS TQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  erekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPRTSNS  360
            EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISP+TSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  FETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSKKTPLNPNDLRSLEEEIKSYY  420
             ETMRVVKEKENYNGLLVDKETTIKRSY+GTLISENSYSKK+P+NPNDLRSLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYANGISLYVKIKNDPYKEGMLCGYESIQNLLSP  460
            IKSNGLCYANGISLY KIKNDPYKEGMLCGYES+QNLLSP
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESVQNLLSP  460

46) HPSNT_02690 in NC_017376


> AY330636|2|G2|37811779|AAR03854.1|Helicobacter_pylori_Ca52|+|468..1913|cag3|HP0522|Cag3
Length=481

 Score =  567 bits (2142),  Expect = 3e-163, Method: Compositional matrix adjust.
 Identities = 445/454 (99%), Positives = 450/454 (99%), Gaps = 0/454 (0%)

Query  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIkatketketkkeakrlkkearqrqqIPD  60
            MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEA+QRQQIPD
Sbjct  1    MFRKLATAVSLIGLLTSNTLYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPD  60

Query  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120
            HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI
Sbjct  61   HKKPQYASVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSI  120

Query  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180
            ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR
Sbjct  121  ENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINENMPYAQATFLR  180

Query  181  VPKRSDPNAHTLDKGASIDENKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240
            VPKRSDPNAHTLDKGASIDENKLFEQQK+MYFNYANDVICRPNDEVCSPLRDEMVAMPTS
Sbjct  181  VPKRSDPNAHTLDKGASIDENKLFEQQKRMYFNYANDVICRPNDEVCSPLRDEMVAMPTS  240

Query  241  DSVTQKPNIIAPYSLYRLKETNNANEVQPSPYATQTAPENSKEKLIEELIANSQLIanee  300
            DSVTQKPNIIAPYSLYRLKETNNANE QPSPYATQTAPENSKEKLIEELIANSQLIANEE
Sbjct  241  DSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEE  300

Query  301  emekkllaekekqeaelakyklkDlenqkklkaleaelkkknakkPRVVEVPISPKTSNS  360
            E EKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS
Sbjct  301  EREKKLLAEKEKQEAELAKYKLKDLENQKKLKALEAELKKKNAKKPRVVEVPISPKTSNS  360

Query  361  FETMRVIKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLKSLEEEIKSYY  420
             ETMRV+KEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDL+SLEEEIKSYY
Sbjct  361  DETMRVVKEKENYNGLLVDKETTIKRSYEGTLISENSYSKKSPINPNDLRSLEEEIKSYY  420

Query  421  IKSNGLCYTNGISLYVKIKNDPYKEGMLCGYESV  454
            IKSNGLCY+NGISLY KIKNDPYKEGMLCGYESV
Sbjct  421  IKSNGLCYANGISLYAKIKNDPYKEGMLCGYESV  454