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Homologs of korB gene of AJ496288

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) korB
( YP_001610464.1 )

trans-acting regulatory protein

NC_010161
(Bartonella tribocorum CIP 105476)

1e-38

100

2) korB
( YP_002972690.1 )

KorB protein

NC_012846
(Bartonella grahamii as4aup)

8e-38

3) korB
( YP_007463262.1 )

KorB protein

NC_020301
(Bartonella vinsonii Winnie)

7e-37

4) korB
( YP_034249.1 )

korB protein

NC_005956
(Bartonella henselae Houston-1)

8e-34

5) RM11_1145
( YP_006665558.1 )

trans-acting regulatory protein hvrA

NC_018533
(Bartonella quintana RM-11)

6e-33

6) hvrA
( YP_032772.1 )

trans-acting regulatory protein hvrA

NC_005955
(Bartonella quintana Toulouse)

3e-32

7) korB
( YP_007461851.1 )

KorB protein

NC_020300
(Bartonella australis Aust/NH1)

4e-32

• Sequence Alignments

1) korB in NC_010161


> AJ496288|2|G2|32328571|CAD42833.1|Bartonella_tribocorum_IBS_506T|-|4072..4359|korB|-|KorB 
protein
Length=95

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%)

Query  1   MNDLKNMNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYR  60
           MNDLKNMNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYR
Sbjct  1   MNDLKNMNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYR  60

Query  61  NPNNQWELWNGRGRRPKWIKEWLENGYTLDELEVT  95
           NPNNQWELWNGRGRRPKWIKEWLENGYTLDELEVT
Sbjct  61  NPNNQWELWNGRGRRPKWIKEWLENGYTLDELEVT  95

2) korB in NC_012846


> AJ496288|2|G2|32328571|CAD42833.1|Bartonella_tribocorum_IBS_506T|-|4072..4359|korB|-|KorB 
protein
Length=95

 Score =  149 bits (549),  Expect = 8e-38, Method: Compositional matrix adjust.
 Identities = 92/95 (97%), Positives = 94/95 (99%), Gaps = 0/95 (0%)

Query  1   MNDLKNMNFDELQEMRTQIDVELKKRQAKEKQNARRKILEIANAHGIDIADLVSKERHYR  60
           MNDLKNMNFDELQEMR QID+ELKKRQAKEKQNARRKILEIAN+HGIDIADLVSKERHYR
Sbjct  1   MNDLKNMNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYR  60

Query  61  NPNNQWELWNGRGRRPKWIKEWLENGYTLDELEVT  95
           NPNNQWELWNGRGRRPKWIKEWLENGYTLDELEVT
Sbjct  61  NPNNQWELWNGRGRRPKWIKEWLENGYTLDELEVT  95

3) korB in NC_020301


> AJ496288|2|G2|32328571|CAD42833.1|Bartonella_tribocorum_IBS_506T|-|4072..4359|korB|-|KorB 
protein
Length=95

 Score =  146 bits (537),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 87/95 (92%), Positives = 94/95 (99%), Gaps = 0/95 (0%)

Query  1   MNDLKNMNFDELQEMRAKIDVELKKRHAKEKQNARRKILEIANAHGIDIADLVSKERHYR  60
           MNDLKNMNFDELQEMR +ID+ELKKR+AKEKQNARRKILEIAN+HGIDIADLVSKERHYR
Sbjct  1   MNDLKNMNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYR  60

Query  61  NPNNQWELWNGRGRRPKWIKEWLENGYALEELEIT  95
           NPNNQWELWNGRGRRPKWIKEWLENGY+L+ELE+T
Sbjct  61  NPNNQWELWNGRGRRPKWIKEWLENGYTLDELEVT  95

4) korB in NC_005956


> AJ496288|2|G2|32328571|CAD42833.1|Bartonella_tribocorum_IBS_506T|-|4072..4359|korB|-|KorB 
protein
Length=95

 Score =  136 bits (499),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 82/89 (93%), Positives = 87/89 (98%), Gaps = 0/89 (0%)

Query  1   MNLDELQEMRIQIDAELKKRQAKEKQNARRKILEIANAHGIDIADLVRKERHYRNPNNQW  60
           MN+DELQEMRIQID ELKKRQAKEKQNARRKILEIAN+HGIDIADLV KERHYRNPNNQW
Sbjct  7   MNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYRNPNNQW  66

Query  61  ELWNGRGRKPKWIKEWLENGYALEELEVT  89
           ELWNGRGR+PKWIKEWLENGY+L+ELEVT
Sbjct  67  ELWNGRGRRPKWIKEWLENGYTLDELEVT  95

5) RM11_1145 in NC_018533


> AJ496288|2|G2|32328571|CAD42833.1|Bartonella_tribocorum_IBS_506T|-|4072..4359|korB|-|KorB 
protein
Length=95

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 81/88 (93%), Positives = 86/88 (98%), Gaps = 0/88 (0%)

Query  1   MNLDELQEMRIQIDAELKKRQAKEKQNARRKILEIANAHGIDIADLVNKERYYRNPNNQW  60
           MN+DELQEMRIQID ELKKRQAKEKQNARRKILEIAN+HGIDIADLV+KER YRNPNNQW
Sbjct  7   MNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYRNPNNQW  66

Query  61  ELWNGRGRKPKWIKEWLENGYTLEELEV  88
           ELWNGRGR+PKWIKEWLENGYTL+ELEV
Sbjct  67  ELWNGRGRRPKWIKEWLENGYTLDELEV  94

6) hvrA in NC_005955


> AJ496288|2|G2|32328571|CAD42833.1|Bartonella_tribocorum_IBS_506T|-|4072..4359|korB|-|KorB 
protein
Length=95

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 80/88 (91%), Positives = 85/88 (97%), Gaps = 0/88 (0%)

Query  1   MNLDELQEMRIQIDAELKKRQAKEKQNARRKILEIANAHGIDIADLVSKERYYRNPNNQW  60
           MN+DELQEMRIQID ELKKRQAKEKQNARRKILEIAN+HGIDIADLVSKER YRNPNNQW
Sbjct  7   MNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYRNPNNQW  66

Query  61  ELWNGRGRKPKWIKEWLEKGCTLEELEV  88
           ELWNGRGR+PKWIKEWLE+G TL+ELEV
Sbjct  67  ELWNGRGRRPKWIKEWLENGYTLDELEV  94

7) korB in NC_020300


> AJ496288|2|G2|32328571|CAD42833.1|Bartonella_tribocorum_IBS_506T|-|4072..4359|korB|-|KorB 
protein
Length=95

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 76/95 (80%), Positives = 89/95 (94%), Gaps = 0/95 (0%)

Query  1   MNDFRGMKPDELREIRAQIDVELKKWQAKEKQDARRKILEIANTHGIDIADLVKKERHYR  60
           MND++ M+ DEL+E+R QID+ELKK+QAKEKQ+ARRKILEIANTHGIDIADLV KERHYR
Sbjct  1   MNDLKNMNFDELQEMRIQIDMELKKRQAKEKQNARRKILEIANTHGIDIADLVSKERHYR  60

Query  61  NPDNQWELWNGRGRKPKWVKEWLKNGCSLEELEVT  95
           NP+NQWELWNGRGR+PKW+KEWL NG +L+ELEVT
Sbjct  61  NPNNQWELWNGRGRRPKWIKEWLENGYTLDELEVT  95