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Homologs of intB gene of AJ494981

406

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECP_4521
( YP_672358.1 )

prophage P4 integrase

NC_008253
(Escherichia coli 536)

0.0

100

2) ECABU_c48360
( YP_006108746.1 )

prophage P4 integrase

NC_017631
(Escherichia coli ABU 83972)

0.0

3) UM146_21610
( YP_006113162.1 )

prophage P4 integrase

NC_017632
(Escherichia coli UM146)

0.0

4) intB
( YP_543812.1 )

prophage P4 integrase

NC_007946
(Escherichia coli UTI89)

0.0

5) i14_4873a
( YP_006156926.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

0.0

6) i02_4873a
( YP_006152007.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

0.0

7) EcSMS35_4753
( YP_001746674.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

0.0

8) intB
( YP_002405686.1 )

integrase; KpLE2 phage-like element

NC_011748
(Escherichia coli 55989)

0.0

9) APECO78_02320
( YP_007379647.1 )

phage integrase family site specific recombinase

NC_020163
(Escherichia coli APEC O78)

0.0

10) CE10_5017
( YP_006146968.1 )

phage integrase family site specific recombinase

NC_017646
(Escherichia coli CE10)

0.0

11) intB
( YP_003001820.1 )

intB

NC_012892
(Escherichia coli BL21(DE3))

0.0

12) intB
( YP_003056695.1 )

integrase

NC_012971
(Escherichia coli BL21(DE3))

0.0

13) EcDH1_3727
( YP_006093621.1 )

integrase family protein

NC_017625
(Escherichia coli DH1)

0.0

14) intB
( YP_006131525.1 )

site-specific recombinase

NC_017638
(Escherichia coli DH1)

0.0

15) intB
( YP_002400869.1 )

putative integrase; KpLE2 phage-like element

NC_011745
(Escherichia coli ED1a)

0.0

16) ECBD_3766
( YP_003037938.1 )

integrase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

0.0

17) ETEC_4611
( YP_006118149.1 )

putative phage integrase

NC_017633
(Escherichia coli ETEC H10407)

0.0

18) intB
( YP_002410602.1 )

putative integrase; KpLE2 phage-like element

NC_011750
(Escherichia coli IAI39)

0.0

19) intB
( YP_001733029.1 )

KpLE2 phage-like element; integrase

NC_010473
(Escherichia coli K-12)

0.0

20) intB
( YP_492408.1 )

integrase

NC_007779
(Escherichia coli K-12)

0.0

21) intB
( YP_006171360.1 )

Prophage P4 integrase (Int(P4))

NC_017663
(Escherichia coli P12b)

0.0

22) intB
( YP_003047305.1 )

putative integrase

NC_012967
(Escherichia coli REL606)

0.0

23) intB
( YP_002415396.1 )

putative integrase; KpLE2 phage-like element

NC_011751
(Escherichia coli UMN026)

0.0

24) KOX_09480
( YP_005017861.1 )

phage integrase family protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

4e-170

25) Ent638_0463
( YP_001175202.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

9e-169

26) D782_3965
( YP_007342049.1 )

Integrase

NC_020063
(Enterobacteriaceae bacterium FGI 57)

2e-166

27) Dd586_0394
( YP_003331995.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

7e-162

28) EAM_3037
( YP_003540101.1 )

integrase

NC_013971
(Erwinia amylovora ATCC 49946)

2e-161

29) intB
( YP_003529741.1 )

integrase

NC_013961
(Erwinia amylovora CFBP1430)

2e-161

30) SbBS512_E4814
( YP_001882951.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

2e-161

31) A225_0566
( YP_006496338.1 )

integrase

NC_018106
(Klebsiella oxytoca E718)

1e-160

32) intB
( YP_004950346.1 )

prophage P4 integrase

NC_016514
(Enterobacter cloacae EcWSU1)

1e-160

33) intB
( YP_410419.1 )

prophage P4 integrase

NC_007613
(Shigella boydii Sb227)

4e-160

34) EKO11_4043
( YP_005279675.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

7e-160

35) KO11_22995
( YP_006166907.1 )

hypothetical protein

NC_017660
(Escherichia coli KO11FL)

7e-160

36) LY180_22420
( YP_008567485.1 )

integrase

NC_022364
(Escherichia coli LY180)

7e-160

37) WFL_22550
( YP_006175932.1 )

hypothetical protein

NC_017664
(Escherichia coli W)

7e-160

38) CFSAN002050_05850
( YP_008259116.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

7e-158

39) Ser39006_0951
( YP_008521333.1 )

protein of unknown function DUF4102

NC_022268
(Serratia sp. ATCC 39006)

9e-158

40) ECO103_5061
( YP_003224874.1 )

integrase

NC_013353
(Escherichia coli 12009)

1e-156

41) SARI_03082
( YP_001572064.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

6e-153

42) CFSAN001992_11535
( YP_007472047.1 )

phage integrase family site-specific recombinase

NC_020307
(Salmonella enterica CFSAN001992)

1e-152

43) EKO11_4021
( YP_005279654.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

1e-150

44) KO11_23100
( YP_006166928.1 )

site-specific recombinase, phage integrase family protein

NC_017660
(Escherichia coli KO11FL)

1e-150

45) LY180_22530
( YP_008567507.1 )

integrase

NC_022364
(Escherichia coli LY180)

1e-150

46) ECW_m4652
( YP_006127166.1 )

putative P4-type integrase

NC_017635
(Escherichia coli W)

1e-150

47) WFL_22655
( YP_006175953.1 )

site-specific recombinase, phage integrase family protein

NC_017664
(Escherichia coli W)

1e-150

48) H650_18245
( YP_008109403.1 )

integrase

NC_021500
(Enterobacter sp. R4-368)

4e-150

49) intB
( YP_005625501.1 )

integrase

NC_017265
(Yersinia pestis Harbin 35)

5e-150

50) A1122_08715
( YP_005521414.1 )

integrase

NC_017168
(Yersinia pestis A1122)

3e-149

51) YPA_2939
( YP_652846.1 )

integrase

NC_008150
(Yersinia pestis Antiqua)

3e-149

52) intB
( YP_002348329.1 )

integrase

NC_003143
(Yersinia pestis CO92)

3e-149

53) intB
( YP_005506227.1 )

integrase

NC_017154
(Yersinia pestis D106004)

3e-149

54) intB
( YP_005510085.1 )

integrase

NC_017160
(Yersinia pestis D182038)

3e-149

55) YPN_0651
( YP_646583.1 )

integrase

NC_008149
(Yersinia pestis Nepal516)

3e-149

56) intB
( YP_003569204.1 )

integrase

NC_014029
(Yersinia pestis Z176003)

3e-149

57) intB
( NP_992037.1 )

integrase

NC_005810
(Yersinia pestis 91001)

4e-149

58) YpAngola_A4051
( YP_001608341.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

4e-149

59) intB
( NP_668085.1 )

integrase

NC_004088
(Yersinia pestis KIM)

4e-149

60) Entcl_3878
( YP_003943402.1 )

integrase family protein

NC_014618
(Enterobacter cloacae SCF1)

4e-149

61) YPK_3676
( YP_001722396.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

2e-148

62) YPDSF_3248
( YP_001164578.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

2e-148

63) EC042_4741
( YP_006098991.1 )

integrase

NC_017626
(Escherichia coli 042)

4e-148

64) PAGR_g3659
( YP_005994368.1 )

integrase

NC_017554
(Pantoea ananatis PA13)

2e-147

65) EBL_c34780
( YP_006321045.1 )

prophage P4 integrase

NC_017910
(Escherichia blattae DSM 4481)

3e-147

66) ECENHK_02620
( YP_006577041.1 )

phage integrase family site-specific recombinase

NC_018405
(Enterobacter cloacae ENHKU01)

2e-146

67) H650_18115
( YP_008109377.1 )

integrase

NC_021500
(Enterobacter sp. R4-368)

2e-146

68) KPN2242_01530
( YP_005952795.1 )

site-specific recombinase, phage integrase family protein

NC_017540
(Klebsiella pneumoniae KCTC 2242)

4e-145

69) ECA2879
( YP_050970.1 )

integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

3e-143

70) KPK_4978
( YP_002240755.1 )

phage integrase family site-specific recombinase

NC_011283
(Klebsiella pneumoniae 342)

3e-142

71) YpsIP31758_3540
( YP_001402494.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

3e-142

72) ECO55CA74_24440
( YP_006161977.1 )

Prophage integrase

NC_017656
(Escherichia coli RM12579)

2e-141

73) ETAF_2789
( YP_005700383.1 )

Integrase

NC_017309
(Edwardsiella tarda FL6-60)

7e-141

74) MU9_135
( YP_007503554.1 )

prophage integrase

NC_020418
(Morganella morganii KT)

8e-141

75) W5S_0472
( YP_006281470.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

1e-140

76) ETAC_14745
( YP_007630430.1 )

Prophage integrase

NC_020796
(Edwardsiella tarda C07-087)

1e-140

77) int
( YP_002389727.1 )

Prophage integrase

NC_011741
(Escherichia coli IAI1)

1e-140

78) CKO_03532
( YP_001455048.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

3e-140

79) intB
( YP_002153152.1 )

prophage integrase

NC_010554
(Proteus mirabilis HI4320)

2e-139

80) SFV_4227
( YP_691515.1 )

P4-type integrase

NC_008258
(Shigella flexneri 8401)

7e-139

81) SPC_4619
( YP_002640109.1 )

integrase

NC_012125
(Salmonella enterica RKS4594)

7e-139

82) SFxv_4606
( YP_005729812.1 )

putative P4-type integrase

NC_017328
(Shigella flexneri 2002017)

5e-138

83) S4839
( NP_839619.1 )

P4-type integrase

NC_004741
(Shigella flexneri 2457T)

5e-138

84) SF4224
( NP_709936.2 )

P4-type integrase

NC_004337
(Shigella flexneri 301)

5e-138

85) c5216
( NP_757064.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

6e-138

86) ECO26_4069
( YP_003230994.1 )

integrase

NC_013361
(Escherichia coli 11368)

1e-137

87) int
( YP_002400684.1 )

Prophage integrase

NC_011745
(Escherichia coli ED1a)

1e-137

88) APECO1_3534
( YP_854214.1 )

P4-like integrase

NC_008563
(Escherichia coli APEC O1)

2e-137

89) CE10_4872
( YP_006146828.1 )

Prophage integrase

NC_017646
(Escherichia coli CE10)

2e-137

90) int
( YP_002392871.1 )

Prophage integrase

NC_011742
(Escherichia coli S88)

2e-137

91) W5S_1543
( YP_006282507.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

1e-136

92) EcE24377A_3314
( YP_001464322.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

1e-136

93) int
( YP_002410463.1 )

Prophage integrase

NC_011750
(Escherichia coli IAI39)

1e-136

94) ROD_50201
( YP_003368377.1 )

integrase

NC_013716
(Citrobacter rodentium ICC168)

1e-136

95) S70_06120
( YP_006215787.1 )

Prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

2e-136

96) EC042_4610
( YP_006098876.1 )

integrase

NC_017626
(Escherichia coli 042)

8e-137

97) O3M_04655
( YP_006768605.1 )

Prophage integrase

NC_018650
(Escherichia coli 2009EL-2050)

8e-137

98) O3O_21040
( YP_006782711.1 )

Prophage integrase

NC_018661
(Escherichia coli 2009EL-2071)

8e-137

99) O3K_04610
( YP_006777642.1 )

Prophage integrase

NC_018658
(Escherichia coli 2011C-3493)

8e-137

100) int
( YP_002404232.1 )

Prophage integrase

NC_011748
(Escherichia coli 55989)

8e-137

101) UMNK88_3667
( YP_006135366.1 )

phage integrase

NC_017641
(Escherichia coli UMNK88)

8e-137

102) EC042_3174
( YP_006097466.1 )

integrase

NC_017626
(Escherichia coli 042)

2e-136

103) ECP_2962
( YP_670846.1 )

P4-type integrase

NC_008253
(Escherichia coli 536)

2e-136

104) EcolC_3878
( YP_001726809.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

2e-136

105) S70_13465
( YP_006217222.1 )

Prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

2e-136

106) Pecwa_1669
( YP_003259066.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

3e-136

107) ECO111_5079
( YP_003237359.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

4e-136

108) ECO26_5300
( YP_003232178.1 )

integrase

NC_013361
(Escherichia coli 11368)

4e-136

109) ECO103_3550
( YP_003223418.1 )

integrase

NC_013353
(Escherichia coli 12009)

4e-136

110) ECO103_4929
( YP_003224745.1 )

integrase

NC_013353
(Escherichia coli 12009)

4e-136

111) E2348C_3220
( YP_002330696.1 )

integrase

NC_011601
(Escherichia coli E2348/69)

4e-136

112) c3556
( NP_755431.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

6e-136

113) MU9_117
( YP_007503536.1 )

prophage integrase

NC_020418
(Morganella morganii KT)

8e-136

114) ETEC_4481
( YP_006118020.1 )

KpLE2 phage-like element; predicted integrase

NC_017633
(Escherichia coli ETEC H10407)

9e-136

115) ECABU_c32560
( YP_006107255.1 )

site-specific recombinase

NC_017631
(Escherichia coli ABU 83972)

2e-135

116) int
( YP_859807.1 )

Int ( P4-type integrase)

NC_008563
(Escherichia coli APEC O1)

2e-135

117) intB
( YP_003501106.1 )

Site-specific recombinase, phage integrase family protein

NC_013941
(Escherichia coli CB9615)

2e-135

118) CE10_3417
( YP_006145430.1 )

integrase

NC_017646
(Escherichia coli CE10)

2e-135

119) i14_3273
( YP_006155358.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

2e-135

120) i02_3273
( YP_006150439.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

2e-135

121) ECH74115_4272
( YP_002272448.1 )

site-specific recombinase, phage integrase family protein

NC_011353
(Escherichia coli EC4115)

2e-135

122) ECED1_3430
( YP_002399303.1 )

integrase

NC_011745
(Escherichia coli ED1a)

2e-135

123) Z4313
( NP_289539.1 )

pathogenicity island integrase

NC_002655
(Escherichia coli EDL933)

2e-135

124) int
( YP_006141472.1 )

Integrase

NC_017644
(Escherichia coli NA114)

2e-135

125) ECO55CA74_17295
( YP_006160577.1 )

Site-specific recombinase, phage integrase family protein

NC_017656
(Escherichia coli RM12579)

2e-135

126) ECS88_4720
( YP_002394207.1 )

integrase

NC_011742
(Escherichia coli S88)

2e-135

127) ECs3843
( NP_311870.1 )

integrase

NC_002695
(Escherichia coli Sakai)

2e-135

128) ECSP_3940
( YP_003079757.1 )

pathogenicity island integrase

NC_013008
(Escherichia coli TW14359)

2e-135

129) CDCO157_3594
( YP_006314460.1 )

integrase

NC_017906
(Escherichia coli Xuzhou21)

2e-135

130) ETEC_3157
( YP_006116702.1 )

phage integrase

NC_017633
(Escherichia coli ETEC H10407)

3e-135

131) int
( YP_002409310.1 )

Prophage integrase

NC_011750
(Escherichia coli IAI39)

3e-135

132) YpsIP31758_0809
( YP_001399793.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

4e-135

133) ECO111_3718
( YP_003236059.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

4e-135

134) EcolC_0747
( YP_001723746.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

5e-135

135) ECUMN_3322
( YP_002414004.1 )

integrase

NC_011751
(Escherichia coli UMN026)

1e-134

136) EAE_09085
( YP_004592016.1 )

prothage integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

2e-133

137) Ser39006_3432
( YP_008523814.1 )

integrase family protein

NC_022268
(Serratia sp. ATCC 39006)

2e-132

138) ECABU_c49370
( YP_006108845.1 )

prophage P4 integrase

NC_017631
(Escherichia coli ABU 83972)

2e-132

139) c5371
( NP_757219.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

4e-132

140) i14_4891
( YP_006156950.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

4e-132

141) i02_4891
( YP_006152031.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

4e-132

142) O3M_22875
( YP_006772189.1 )

Prophage integrase

NC_018650
(Escherichia coli 2009EL-2050)

3e-130

143) O3K_22970
( YP_006781250.1 )

Prophage integrase

NC_018658
(Escherichia coli 2011C-3493)

3e-130

144) int
( YP_002405550.1 )

Prophage integrase

NC_011748
(Escherichia coli 55989)

3e-130

145) SFxv_3245
( YP_005728584.1 )

Site-specific recombinase, phage integrase family protein

NC_017328
(Shigella flexneri 2002017)

3e-130

146) S4822
( NP_838459.1 )

P4-type integrase

NC_004741
(Shigella flexneri 2457T)

3e-130

147) SF2964
( NP_708738.1 )

P4-type integrase

NC_004337
(Shigella flexneri 301)

3e-130

148) intB
( YP_005802313.1 )

protein intB

NC_017390
(Erwinia pyrifoliae DSM 12163)

3e-125

149) EpC_14570
( YP_002648472.1 )

phage integrase family protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-125

150) CFSAN002050_22445
( YP_008262355.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

5e-124

151) SARI_03312
( YP_001572286.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-123

152) Ent638_2887
( YP_001177603.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

6e-122

153) plu4477
( NP_931643.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

8e-121

154) Dd1591_3702
( YP_003005986.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

1e-118

155) intB
( YP_049780.1 )

phage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

8e-118

156) Dd703_3541
( YP_002989121.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

3e-117

157) Pecwa_1586
( YP_003258984.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

1e-115

158) STBHUCCB_9400
( YP_005216516.1 )

CP4-like integrase

NC_016832
(Salmonella enterica P-stx-12)

5e-116

159) t05065
( YP_006892430.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

5e-116

160) TY21A_04490
( YP_007925220.1 )

Prophage integrase

NC_021176
(Salmonella enterica Ty21a)

5e-116

161) int
( YP_002398227.1 )

Prophage integrase

NC_011745
(Escherichia coli ED1a)

1e-115

162) W5S_1599
( YP_006282563.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

1e-115

163) Dd703_2459
( YP_002988063.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

1e-115

164) A79E_1796
( YP_006635603.1 )

integrase

NC_018522
(Klebsiella pneumoniae 1084)

3e-115

165) Pecwa_1766
( YP_003259159.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

3e-115

166) ECOK1_4788
( YP_006103840.1 )

site-specific recombinase, phage integrase family

NC_017628
(Escherichia coli IHE3034)

6e-115

167) SEEB0189_19950
( YP_008310270.1 )

integrase

NC_021844
(Salmonella enterica CFSAN000189)

1e-114

168) Dda3937_03406
( YP_003881783.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

1e-114

169) SSPA3984
( YP_002144818.1 )

integrase

NC_011147
(Salmonella enterica AKU12601)

8e-115

170) int
( YP_153333.1 )

integrase

NC_006511
(Salmonella enterica ATCC 9150)

8e-115

171) intB
( YP_050980.1 )

integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

9e-115

172) ECO26_5435
( YP_003232308.1 )

integrase

NC_013361
(Escherichia coli 11368)

3e-114

173) Dd586_0881
( YP_003332472.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

5e-114

174) PC1_0871
( YP_003016457.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

5e-114

175) Pecwa_0718
( YP_003258145.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

1e-113

176) Pecwa_0447
( YP_003257894.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

2e-113

177) KPHS_05400
( YP_005224840.1 )

putative P4-type integrase

NC_016845
(Klebsiella pneumoniae HS11286)

2e-113

178) N559_4601
( YP_008427480.1 )

P4-type integrase

NC_022082
(Klebsiella pneumoniae JM45)

2e-113

179) Y11_15011
( YP_006005000.1 )

integrase

NC_017564
(Yersinia enterocolitica Y11)

5e-113

180) ENC_43890
( YP_007847599.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

2e-112

181) ETAE_3092
( YP_003297134.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

3e-112

182) STY4821
( NP_458899.1 )

integrase

NC_003198
(Salmonella enterica CT18)

3e-112

183) t4518
( NP_808103.1 )

integrase

NC_004631
(Salmonella enterica Ty2)

3e-112

184) TY21A_22985
( YP_007928753.1 )

integrase

NC_021176
(Salmonella enterica Ty21a)

3e-112

185) W5S_0459
( YP_006281457.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

4e-112

186) SNSL254_A4836
( YP_002043726.1 )

integrase

NC_011080
(Salmonella enterica SL254)

8e-112

187) SN31241_8570
( YP_008358775.1 )

Integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-111

188) Rahaq_1192
( YP_004211942.1 )

integrase family protein

NC_015061
(Rahnella sp. Y9602)

3e-111

189) SPUCDC_0925
( YP_008480613.1 )

phage integrase

NC_022221
(Salmonella enterica CDC1983-67)

4e-111

190) SEN1970
( YP_002244067.1 )

phage integrase

NC_011294
(Salmonella enterica P125109)

4e-111

191) SPUL_0925
( YP_005212155.1 )

phage integrase

NC_016831
(Salmonella enterica RKS5078)

4e-111

192) I137_04205
( YP_008380372.1 )

integrase

NC_021984
(Salmonella enterica S06004)

5e-111

193) ETA_03770
( YP_001906331.1 )

P4-type integrase

NC_010694
(Erwinia tasmaniensis Et1/99)

4e-111

194) SG1996
( YP_002226930.1 )

phage integrase

NC_011274
(Salmonella enterica 287/91)

8e-111

195) SeAg_B2068
( YP_002146918.1 )

integrase

NC_011149
(Salmonella enterica SL483)

8e-111

196) SeD_A2305
( YP_002216062.1 )

integrase

NC_011205
(Salmonella enterica CT_02021853)

9e-111

197) intA_4
( YP_008574436.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

9e-111

198) W5S_1679
( YP_006282643.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

2e-110

199) Dd586_2635
( YP_003334184.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

7e-110

200) PAU_03981
( YP_003042810.1 )

p4 integrase-like protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-109

201) Dd586_1478
( YP_003333051.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

2e-109

202) E2348C_2119
( YP_002329631.1 )

integrase

NC_011601
(Escherichia coli E2348/69)

3e-109

203) ECO111_2624
( YP_003235033.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

3e-108

204) Pecwa_1727
( YP_003259121.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

5e-108

205) CFSAN002050_16945
( YP_008261284.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

6e-108

206) Dda3937_00080
( YP_003883684.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

7e-108

207) A79E_1748
( YP_006635556.1 )

integrase

NC_018522
(Klebsiella pneumoniae 1084)

7e-108

208) intB
( YP_003713602.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

5e-107

209) SPAB_01138
( YP_001587388.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-106

210) SBO_4174
( YP_410429.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

6e-107

211) intB
( YP_003469249.1 )

KpLE2 phage-like element; P4-like integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

6e-107

212) intB
( YP_003712791.1 )

KpLE2 phage-like element; P4-like integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

8e-107

213) Dd1591_1514
( YP_003003849.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

9e-107

214) SeAg_B4773
( YP_002149406.2 )

integrase

NC_011149
(Salmonella enterica SL483)

9e-107

215) SBO_1221
( YP_407678.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

1e-106

216) int
( YP_002398182.1 )

integrase

NC_011745
(Escherichia coli ED1a)

6e-106

217) SbBS512_E0979
( YP_001879655.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

1e-105

218) KOX_24355
( YP_005020825.1 )

integrase family protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

2e-105

219) ROD_20671
( YP_003365620.1 )

integrase

NC_013716
(Citrobacter rodentium ICC168)

3e-105

220) CKO_00953
( YP_001452539.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

3e-105

221) ST548_p7750
( YP_007386848.1 )

Integrase

NC_020181
(Enterobacter aerogenes EA1509E)

3e-105

222) A79E_1743
( YP_006635553.1 )

integrase

NC_018522
(Klebsiella pneumoniae 1084)

3e-105

223) KPR_3398
( YP_007992374.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

3e-105

224) W5S_1636
( YP_006282600.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

4e-105

225) Pecwa_1693
( YP_003259087.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

4e-105

226) KPK_1811
( YP_002237656.1 )

integrase

NC_011283
(Klebsiella pneumoniae 342)

5e-105

227) intB
( YP_003468561.1 )

prophage like-integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

6e-105

228) PPS_0628
( YP_004700093.1 )

phage integrase family protein

NC_015733
(Pseudomonas putida S16)

8e-105

229) intB
( YP_003714347.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

1e-104

230) Rahaq2_2006
( YP_005200009.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

4e-104

231) M621_16100
( YP_008160007.1 )

integrase

NC_021659
(Serratia plymuthica S13)

4e-104

232) int
( YP_002920242.1 )

integrase

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

3e-103

233) int
( YP_002412985.1 )

integrase

NC_011751
(Escherichia coli UMN026)

1e-102

234) KPHS_34600
( YP_005227760.1 )

integrase

NC_016845
(Klebsiella pneumoniae HS11286)

1e-102

235) CKO_00917
( YP_001452503.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

3e-102

236) ST548_p7779
( YP_007386819.1 )

Integrase

NC_020181
(Enterobacter aerogenes EA1509E)

3e-102

237) A79E_1712
( YP_006635522.1 )

integrase

NC_018522
(Klebsiella pneumoniae 1084)

3e-102

238) int2
( NP_993013.1 )

integrase

NC_005810
(Yersinia pestis 91001)

1e-101

239) YPA_1295
( YP_651207.1 )

integrase

NC_008150
(Yersinia pestis Antiqua)

1e-101

240) int
( YP_002346908.1 )

integrase

NC_003143
(Yersinia pestis CO92)

1e-101

241) int
( YP_005504895.1 )

integrase

NC_017154
(Yersinia pestis D106004)

1e-101

242) int
( YP_005508939.1 )

integrase

NC_017160
(Yersinia pestis D182038)

1e-101

243) y2393
( NP_669700.1 )

prophage integrase

NC_004088
(Yersinia pestis KIM)

1e-101

244) YPDSF_1208
( YP_001162577.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

1e-101

245) Pecwa_3419
( YP_003260764.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

2e-101

246) Dd703_3034
( YP_002988630.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

2e-101

247) KPN2242_15195
( YP_005955494.1 )

integrase

NC_017540
(Klebsiella pneumoniae KCTC 2242)

3e-101

248) EbC_39600
( YP_003743338.1 )

integrase

NC_014306
(Erwinia billingiae Eb661)

4e-101

249) YpAngola_A2104
( YP_001606561.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

4e-101

250) O3M_09700
( YP_006769591.1 )

integrase

NC_018650
(Escherichia coli 2009EL-2050)

5e-101

251) O3O_15890
( YP_006783716.1 )

integrase

NC_018661
(Escherichia coli 2009EL-2071)

5e-101

252) O3K_09735
( YP_006778644.1 )

integrase

NC_018658
(Escherichia coli 2011C-3493)

5e-101

253) int
( YP_002403247.1 )

integrase

NC_011748
(Escherichia coli 55989)

5e-101

254) Rahaq2_2650
( YP_005200640.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

9e-101

255) SG1638
( YP_455318.1 )

phage integrase

NC_007712
(Sodalis glossinidius morsitans)

1e-100

256) ECNA114_2039
( YP_006139140.1 )

prophage P4 integrase

NC_017644
(Escherichia coli NA114)

1e-100

257) LHK_01737
( YP_002795731.1 )

CP4 integrase protein

NC_012559
(Laribacter hongkongensis HLHK9)

1e-100

258) PC1_0858
( YP_003016445.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

2e-100

259) CE10_2255
( YP_006144319.1 )

integrase

NC_017646
(Escherichia coli CE10)

3e-100

260) int
( YP_002407094.1 )

integrase

NC_011750
(Escherichia coli IAI39)

3e-100

261) NRG857_09860
( YP_006120327.1 )

integrase

NC_017634
(Escherichia coli NRG 857C)

3e-100

262) int
( YP_002381990.1 )

phage integrase

NC_011740
(Escherichia fergusonii ATCC 35469)

3e-100

263) KPK_1842
( YP_002237686.1 )

integrase

NC_011283
(Klebsiella pneumoniae 342)

4e-100

264) ECP_1962
( YP_669862.1 )

bacteriophage integrase

NC_008253
(Escherichia coli 536)

5e-100

265) ECABU_c22620
( YP_006106313.1 )

P4-like integrase

NC_017631
(Escherichia coli ABU 83972)

5e-100

266) c2449
( NP_754341.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

5e-100

267) i14_2259
( YP_006154368.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

5e-100

268) i02_2259
( YP_006149449.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

5e-100

269) ECOK1_2168
( YP_006101333.1 )

integrase/recombinase, phage integrase family

NC_017628
(Escherichia coli IHE3034)

5e-100

270) intA_3
( YP_008571925.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

5e-100

271) UM146_07190
( YP_006110343.1 )

bacteriophage integrase

NC_017632
(Escherichia coli UM146)

5e-100

272) UTI89_C2204
( YP_541203.1 )

prophage P4 integrase

NC_007946
(Escherichia coli UTI89)

5e-100

273) int
( NP_458759.1 )

bacteriophage integrase

NC_003198
(Salmonella enterica CT18)

5e-100

274) STBHUCCB_46270
( YP_005220043.1 )

Bacteriophage integrase

NC_016832
(Salmonella enterica P-stx-12)

5e-100

275) int
( NP_807963.1 )

bacteriophage integrase

NC_004631
(Salmonella enterica Ty2)

5e-100

276) int
( YP_001338304.1 )

putative phage integrase

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

9e-100

277) TY21A_22260
( YP_007928610.1 )

bacteriophage integrase

NC_021176
(Salmonella enterica Ty21a)

1e-99

278) int
( YP_004730693.1 )

bacteriophage integrase

NC_015761
(Salmonella bongori NCTC 12419)

2e-99

279) PputW619_4935
( YP_001751780.1 )

integrase family protein

NC_010501
(Pseudomonas putida W619)

3e-99

280) Rahaq2_1748
( YP_005199761.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

5e-99

281) L483_01150
( YP_008092085.1 )

integrase

NC_021491
(Pseudomonas putida H8234)

2e-98

282) Dd703_3554
( YP_002989134.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

1e-97

283) Entas_3110
( YP_004829618.1 )

integrase family protein

NC_015968
(Enterobacter asburiae LF7a)

1e-97

284) Q7S_09690
( YP_005401739.1 )

integrase family protein

NC_017047
(Rahnella aquatilis HX2)

6e-98

285) intB
( YP_008111337.1 )

putative prophage P4 integrase

NC_021505
(Pseudomonas putida NBRC 14164)

2e-97

286) UMNK88_5213
( YP_006136842.1 )

phage integrase

NC_017641
(Escherichia coli UMNK88)

2e-97

287) KPK_1799
( YP_002237646.1 )

integrase

NC_011283
(Klebsiella pneumoniae 342)

3e-97

288) PC1_0501
( YP_003016092.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

5e-97

289) plu4460
( NP_931626.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

5e-97

290) Dd1591_3717
( YP_003005999.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

7e-97

291) Dda3937_01301
( YP_003881181.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

5e-96

292) Dd703_3412
( YP_002988996.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

4e-95

293) Dd1591_3537
( YP_003005827.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

4e-95

294) Dda3937_02713
( YP_003881328.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

5e-95

295) Pfl01_3064
( YP_348793.1 )

Phage integrase

NC_007492
(Pseudomonas fluorescens Pf0-1)

5e-95

296) KPN2242_20085
( YP_005956463.1 )

putative phage integrase

NC_017540
(Klebsiella pneumoniae KCTC 2242)

1e-92

297) SSON53_18230
( YP_005458150.1 )

P4-type integrase

NC_016822
(Shigella sonnei 53G)

3e-92

298) int
( YP_001337026.1 )

putative phage integrase

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

4e-92

299) SbBS512_E4662
( YP_001882825.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

4e-92

300) SBOV45841
( YP_008508356.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

6e-92

301) intB
( YP_008115659.1 )

putative prophage P4 integrase

NC_021505
(Pseudomonas putida NBRC 14164)

9e-92

302) SBO_4322
( YP_410566.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

2e-91

303) PCC21_004050
( YP_006645061.1 )

integrase

NC_018525
(Pectobacterium carotovorum PCC21)

6e-91

304) EC042_2207
( YP_006096513.1 )

integrase

NC_017626
(Escherichia coli 042)

2e-89

305) ETEC_2075
( YP_006115641.1 )

integrase

NC_017633
(Escherichia coli ETEC H10407)

3e-89

306) ECABU_c22350
( YP_006106291.1 )

site-specific recombinase

NC_017631
(Escherichia coli ABU 83972)

2e-87

307) LF82_294
( YP_002556846.1 )

Prophage P4 integrase

NC_011993
(Escherichia coli LF82)

2e-87

308) BJAB0715_03144
( YP_008218292.1 )

Integrase

NC_021733
(Acinetobacter baumannii BJAB0715)

1e-86

309) ECP_1936
( YP_669837.1 )

P4-like integrase

NC_008253
(Escherichia coli 536)

7e-87

310) c2418
( NP_754310.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

7e-87

311) i14_2235
( YP_006154344.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

7e-87

312) i02_2235
( YP_006149425.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

7e-87

313) ECSF_1824
( YP_003349814.1 )

phage integrase

NC_013654
(Escherichia coli SE15)

3e-85

314) PSF113_0326
( YP_005205757.1 )

integrase

NC_016830
(Pseudomonas fluorescens F113)

7e-85

315) APECO1_1051
( YP_853069.1 )

phage integrase

NC_008563
(Escherichia coli APEC O1)

3e-83

316) intA_2
( YP_008571903.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

3e-83

317) UM146_07320
( YP_006110367.1 )

putative phage integrase

NC_017632
(Escherichia coli UM146)

3e-83

318) UTI89_C2177
( YP_541179.1 )

integrase

NC_007946
(Escherichia coli UTI89)

3e-83

319) ECABU_c41260
( YP_006108090.1 )

putative phage integrase

NC_017631
(Escherichia coli ABU 83972)

4e-76

320) intC
( YP_006156223.1 )

putative prophage integrase

NC_017652
(Escherichia coli clone D i14)

4e-76

321) intC
( YP_006151304.1 )

putative prophage integrase

NC_017651
(Escherichia coli clone D i2)

4e-76

322) O3M_00580
( YP_006767801.1 )

hypothetical protein

NC_018650
(Escherichia coli 2009EL-2050)

6e-76

323) O3O_25120
( YP_006781906.1 )

hypothetical protein

NC_018661
(Escherichia coli 2009EL-2071)

6e-76

324) O3K_00550
( YP_006776846.1 )

hypothetical protein

NC_018658
(Escherichia coli 2011C-3493)

6e-76

325) ybl160
( YP_003001213.1 )

ybl160

NC_012892
(Escherichia coli BL21(DE3))

6e-76

326) ECD_03516
( YP_003056085.1 )

hypothetical protein

NC_012971
(Escherichia coli BL21(DE3))

6e-76

327) intC
( NP_756353.1 )

prophage integrase

NC_004431
(Escherichia coli CFT073)

6e-76

328) ECBD_0066
( YP_003034330.1 )

integrase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

6e-76

329) ECB_03516
( YP_003046695.1 )

Int

NC_012967
(Escherichia coli REL606)

6e-76

330) YPK_3149
( YP_001721873.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

7e-76

331) CE10_4227
( YP_006146216.1 )

putative prophage integrase

NC_017646
(Escherichia coli CE10)

1e-75

332) ECIAI39_4188
( YP_002410064.1 )

putative prophage integrase

NC_011750
(Escherichia coli IAI39)

1e-75

333) M621_05660
( YP_008157963.1 )

integrase

NC_021659
(Serratia plymuthica S13)

1e-75

334) SSON_3744
( YP_312525.1 )

integrase

NC_007384
(Shigella sonnei Ss046)

1e-75

335) intL
( NP_290239.1 )

integrase for prophage 933L and the LEE pathogenicity island

NC_002655
(Escherichia coli EDL933)

3e-75

336) ECO55CA74_21080
( YP_006161321.1 )

putative integrase for prophage 933L and the LEE pathogenicity island

NC_017656
(Escherichia coli RM12579)

3e-75

337) ECs4534
( NP_312561.1 )

integrase

NC_002695
(Escherichia coli Sakai)

3e-75

338) intL
( YP_003080451.1 )

integrase for prophage 933L and the LEE pathogenicity island

NC_013008
(Escherichia coli TW14359)

3e-75

339) CDCO157_4272
( YP_006315138.1 )

putative integrase

NC_017906
(Escherichia coli Xuzhou21)

3e-75

340) intC
( YP_691185.1 )

integrase

NC_008258
(Shigella flexneri 8401)

3e-75

341) SFxv_4026
( YP_005729297.1 )

Sai integrase

NC_017328
(Shigella flexneri 2002017)

4e-75

342) S4835
( NP_839238.1 )

integrase

NC_004741
(Shigella flexneri 2457T)

4e-75

343) SF3698
( NP_709437.1 )

integrase

NC_004337
(Shigella flexneri 301)

4e-75

344) intL
( YP_003501848.1 )

CP4-like integrase

NC_013941
(Escherichia coli CB9615)

1e-74

345) ECH74115_5032
( YP_002273139.1 )

integrase

NC_011353
(Escherichia coli EC4115)

1e-74

346) ETEC_3899
( YP_006117440.1 )

integrase

NC_017633
(Escherichia coli ETEC H10407)

9e-75

347) intB
( NP_900321.1 )

prophage CP4-like integrase

NC_005085
(Chromobacterium violaceum ATCC 12472)

2e-74

348) int
( YP_008137204.1 )

integrase Int

NC_021591
(Serratia odorifera 4Rx13)

4e-74

349) Dd586_2842
( YP_003334387.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

9e-73

350) AMBLS11_09695
( YP_006824971.1 )

prophage CP4-like integrase

NC_018692
(Alteromonas macleodii Black Sea 11)

1e-72

351) GM21_1254
( YP_003021073.1 )

integrase family protein

NC_012918
(Geobacter sp. M21)

1e-71

352) MADE_1010570
( YP_004427250.1 )

integrase

NC_011138
(Alteromonas macleodii Deep ecotype)

3e-71

353) intB
( YP_001143574.1 )

phage integrase

NC_009348
(Aeromonas salmonicida A449)

8e-71

354) AHML_14825
( YP_008044080.1 )

phage integrase

NC_021290
(Aeromonas hydrophila ML09-119)

4e-70

355) int
( YP_001908356.1 )

Prophage integrase

NC_010694
(Erwinia tasmaniensis Et1/99)

6e-69

356) int
( YP_002399202.1 )

Integrase from prophage

NC_011745
(Escherichia coli ED1a)

3e-68

357) Tbd_0943
( YP_314701.1 )

integrase prophage protein

NC_007404
(Thiobacillus denitrificans ATCC 25259)

3e-68

358) Q7A_2891
( YP_006297314.1 )

integrase

NC_017857
(Methylophaga sp. JAM1)

1e-67

359) Pecwa_1403
( YP_003258809.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

1e-67

360) PC1_2870
( YP_003018435.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

2e-67

361) ETAC_13020
( YP_007630085.1 )

Prophage integrase

NC_020796
(Edwardsiella tarda C07-087)

2e-67

362) ECL_01076
( YP_003611586.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

3e-67

363) Pecwa_1377
( YP_003258785.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

7e-67

364) SN31241_7100
( YP_008358628.1 )

CP4-like integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

1e-66

365) mll6432
( NP_106945.1 )

symbiosis island integrase

NC_002678
(Mesorhizobium loti MAFF303099)

1e-66

366) SeSA_A0374
( YP_002113350.1 )

site-specific recombinase, phage integrase family protein

NC_011094
(Salmonella enterica CVM19633)

1e-66

367) GBP346_A1152
( YP_002895874.1 )

site-specific recombinase, phage integrase family

NC_012695
(Burkholderia pseudomallei MSHR346)

2e-66

368) SSON53_21650
( YP_005458822.1 )

hypothetical protein

NC_016822
(Shigella sonnei 53G)

8e-67

369) SeHA_C4738
( YP_002048369.1 )

integrase

NC_011083
(Salmonella enterica SL476)

3e-66

370) C380_06330
( YP_006853614.1 )

phage integrase

NC_018708
(Acidovorax sp. KKS102)

5e-66

371) NAL212_1009
( YP_004294089.1 )

integrase family protein

NC_015222
(Nitrosomonas sp. AL212)

6e-66

372) Gbem_3253
( YP_002140046.1 )

bacteriophage P4-type integrase

NC_011146
(Geobacter bemidjiensis Bem)

7e-66

373) EcE24377A_3377
( YP_001464377.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

1e-65

374) EcSMS35_3112
( YP_001745129.1 )

site-specific recombinase, phage integrase family protein

NC_010498
(Escherichia coli SMS-3-5)

1e-65

375) CSSP291_04405
( YP_007439767.1 )

putative integrase

NC_020260
(Cronobacter sakazakii Sp291)

2e-65

376) ECL_03688
( YP_003614171.1 )

putative integrase

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-65

377) YPTB3886
( YP_072362.1 )

integrase

NC_006155
(Yersinia pseudotuberculosis IP 32953)

1e-64

378) YPTS_4103
( YP_001874506.1 )

integrase family protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

1e-64

379) EAE_24695
( YP_004595111.1 )

putative integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

3e-64

380) Galf_2041
( YP_003847811.1 )

integrase family protein

NC_014394
(Gallionella capsiferriformans ES-2)

4e-64

381) W5S_3565
( YP_006284507.1 )

Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_017845
(Pectobacterium sp. SCC3193)

4e-64

382) Mesau_02378
( YP_007304184.1 )

Integrase

NC_019973
(Mesorhizobium australicum WSM2073)

9e-64

383) Mesci_2349
( YP_004141546.1 )

integrase family protein

NC_014923
(Mesorhizobium ciceri WSM1271)

9e-64

384) Mesop_2493
( YP_004611061.1 )

integrase family protein

NC_015675
(Mesorhizobium opportunistum WSM2075)

9e-64

385) Despr_0274
( YP_004193749.1 )

integrase family protein

NC_014972
(Desulfobulbus propionicus DSM 2032)

1e-63

386) Fraau_1988
( YP_005378057.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

8e-63

387) Mpe_A1087
( YP_001020283.1 )

prophage CP4-like integrase

NC_008825
(Methylibium petroleiphilum PM1)

3e-61

388) RSc0968
( NP_519089.1 )

cp4-like integrase

NC_003295
(Ralstonia solanacearum GMI1000)

4e-61

389) NH8B_1001
( YP_004846247.1 )

prophage CP4-like integrase

NC_016002
(Pseudogulbenkiania sp. NH8B)

4e-61

390) XALc_1804
( YP_003376288.1 )

phage-related integrase

NC_013722
(Xanthomonas albilineans GPE PC73)

1e-60

391) Fraau_3064
( YP_005379074.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

2e-60

392) int
( YP_007495002.1 )

Integrase

NC_020409
(Desulfovibrio piezophilus C1TLV30)

4e-60

393) XALc_1632
( YP_003376121.1 )

phage-related integrase

NC_013722
(Xanthomonas albilineans GPE PC73)

6e-60

394) LFML04_0012
( YP_006765226.1 )

phage integrase family protein

NC_018649
(Leptospirillum ferriphilum ML-04)

8e-60

395) GM18_2884
( YP_004199604.1 )

integrase family protein

NC_014973
(Geobacter sp. M18)

2e-59

396) A11S_1005
( YP_007642445.1 )

phage integrase

NC_020812
(Micavibrio aeruginosavorus EPB)

2e-58

397) XCV2217
( YP_363948.1 )

phage-related integrase

NC_007508
(Xanthomonas campestris 85-10)

4e-58

398) AvCA_40500
( YP_007894968.1 )

Phage integrase

NC_021149
(Azotobacter vinelandii CA)

2e-56

399) AvCA6_40500
( YP_007900017.1 )

Phage integrase

NC_021150
(Azotobacter vinelandii CA6)

2e-56

400) Avin_40500
( YP_002801161.1 )

phage integrase

NC_012560
(Azotobacter vinelandii DJ)

2e-56

401) Tbd_2005
( YP_315763.1 )

cp4-like integrase

NC_007404
(Thiobacillus denitrificans ATCC 25259)

2e-56

402) NCGM2_0360
( YP_005978635.1 )

site-specific recombinase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

4e-54

403) Msil_1557
( YP_002361869.1 )

integrase family protein

NC_011666
(Methylocella silvestris BL2)

8e-54

404) AMEC673_10230
( YP_006799117.1 )

prophage CP4-like integrase

NC_018678
(Alteromonas macleodii English Channel 673)

3e-52

405) NAL212_2545
( YP_004295511.1 )

integrase family protein

NC_015222
(Nitrosomonas sp. AL212)

9e-52

406) A1S_2908
( YP_001085916.1 )

integrase

NC_009085
(Acinetobacter baumannii ATCC 17978)

1e-50

• Sequence Alignments

1) ECP_4521 in NC_008253


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  649 bits (2455),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/395 (100%), Positives = 395/395 (100%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

2) ECABU_c48360 in NC_017631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  649 bits (2453),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/395 (99%), Positives = 395/395 (100%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFDYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPF+YAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

3) UM146_21610 in NC_017632


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  649 bits (2453),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/395 (99%), Positives = 395/395 (100%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFDYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPF+YAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

4) intB in NC_007946


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 392/395 (99%), Positives = 394/395 (99%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVAPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGV PGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFDYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPF+YAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

5) i14_4873a in NC_017652


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  641 bits (2423),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 387/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWHSTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEW +TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGSHDLIFIGDHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQFCG+HDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYANVNNPLR  420
            EERRLMLQWWADFLDANREKGISPFEYA++NNPL+
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

6) i02_4873a in NC_017651


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  641 bits (2423),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 387/395 (98%), Positives = 393/395 (99%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWHSTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEW +TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGSHDLIFIGDHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQFCG+HDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYANVNNPLR  420
            EERRLMLQWWADFLDANREKGISPFEYA++NNPL+
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

7) EcSMS35_4753 in NC_010498


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  640 bits (2417),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 389/395 (99%), Positives = 392/395 (99%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWATELSLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWATEL+LLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQFCGAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

8) intB in NC_011748


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  638 bits (2413),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 389/395 (99%), Positives = 392/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWATELSLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWATEL+LLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQFCGAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  395
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

9) APECO78_02320 in NC_020163


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  632 bits (2390),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 389/395 (99%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEAR+LLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

10) CE10_5017 in NC_017646


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  632 bits (2390),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 389/395 (99%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  85
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEAR+LLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  145
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  265
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  325
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

11) intB in NC_012971


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDE+RKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

12) intB in NC_012892


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDE+RKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

13) ECBD_3766 in NC_012947


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDE+RKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

14) intB in NC_012967


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDE+RKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

15) EcDH1_3727 in NC_017625


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2386),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

16) intB in NC_017638


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2386),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

17) intB in NC_011745


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2383),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/395 (98%), Positives = 389/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEAR+LLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLAKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELL+KIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

18) ETEC_4611 in NC_017633


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 389/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEAR+LLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

19) intB in NC_011750


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 389/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEAR+LLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

20) intB in NC_010473


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2386),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

21) intB in NC_007779


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2386),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

22) intB in NC_017663


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDE+RKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

23) intB in NC_011751


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  631 bits (2386),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/395 (98%), Positives = 388/395 (99%), Gaps = 0/395 (0%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240
            LKRIPELLTKIDSYTGRPLTRWA ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS  300
            IPGVKHSHRGSKMRTTHLVPLS QALAILKQIKQF GAHDLIFIG+HDSHKPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL  360
            ALRVMGYDTKVEVCGHGFRTMACSSL+ESGLWSRDAVERQMSHM RNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDVNRERFISPFEYAKINNPLK  395
            EERRLMLQWWADFLD NRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

24) KOX_09480 in NC_016612


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  590 bits (2229),  Expect = 4e-170, Method: Compositional matrix adjust.
 Identities = 364/391 (94%), Positives = 382/391 (98%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPEIkladararrdearkllaNGVDPGDKK  85
            MHLLVHPNGSKYWRLQYR+ GKQKMLALGVYPEI LADAR RRDEARKLLANGVDPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNITELKTRDL  145
            KNDKVEQSKARTFKEVAIEW GTNKKWSEDHAHRVLKSLEDNLFAALGERNI+ELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTSAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRT+AIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREP  265
            LKRIPELL KID+YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVNS  325
            IPGVKHS+RGSKMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERKFMLQWWADFLDVNREKGITPFDYAKIN  416
            +ER++MLQWWADFLD NREKGI+PF+YAKIN
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKIN  391

25) Ent638_0463 in NC_009436


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  586 bits (2212),  Expect = 9e-169, Method: Compositional matrix adjust.
 Identities = 348/391 (90%), Positives = 378/391 (97%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVSLadararrdearKLLANSIDPGDKK  85
            MHLLVHPNGS+YWRLQYR+ GKQKMLALGVYP+++LADAR RRDEARKLLAN++DPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQEEARTFEQLAVEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            KNDKVEQ  ARTF ++A+EW +TNKKWSE+H++RVLKSLEDNLF+A+G RNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALE  205
            LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRIPELLEKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREP  265
            LKRIPELL KIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKHSHRGSKMRTPHLVPLSKQALEILRQIKHFCGEYELIFIGDHDPRKPMSENTVNS  325
            IPGVKHSHRGSKMRT HLVPLS+QAL IL+QIK+FCG  +LIFIG+HD++KPMSENTVNS
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKGITPFDYAKIN  416
            +ER+LMLQWWADFLDANREKGI+PF+YAKIN
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKIN  391

26) D782_3965 in NC_020063


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  578 bits (2181),  Expect = 2e-166, Method: Compositional matrix adjust.
 Identities = 326/391 (84%), Positives = 368/391 (95%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFDGKQKMLALGVYPDVSLADARTRREEARKLVANGIDPGDKK  85
            MHLLVHPNGSKYWRLQYR++GKQKMLALGVYP+++LADAR RR+EARKL+ANG+DPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQEDARTFEQLAIEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNITELKTRDL  145
            KNDKVEQ  ARTF ++AIEW +TNKKWSE+H++RVLKSLEDNLF+A+G RNI+ELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKVVELSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMVGAVASSNRQHRPALE  205
            LAPIK VE+SGRLEVA+RLQQRTTAIMRYAVQSGL+DYNPAQEM GAVAS NRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRTPELLQRIGSYTGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETSMWTIPAEREA  265
            LKR PELL +I+SYTGRPLTR A ELTLL+FIRSSELRFARWSEIDFE+S+WTIP+ERE+
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IEGVKHSQRGSKMRTPHLVPLSRQALEILEQIKTFSGDHELIFIGDHNPRKPMSENTVNK  325
            I GVKHS+RGSKMRT HLVPLSRQAL IL QIK F G H+LIFIG+H+++KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  SLRVMGYDTQVEVCGHGFRTMACSSLIESGLWSRDAVERLMSHMERNSVRAAYIHKAEHL  385
            +LRVMGYDT+VEVCGHGFRTMACSSLIESGLWSRDAVER MSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKAVSPFDFAKLG  416
            +ER+LMLQWWADFLDANREK++SPF++AK+ 
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKIN  391

27) Dd586_0394 in NC_013592


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  563 bits (2124),  Expect = 7e-162, Method: Compositional matrix adjust.
 Identities = 336/391 (86%), Positives = 370/391 (95%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVSLadararrdearKLLANGTDPGDKK  85
            MHLLVHPNGSKYWRLQYR+ GKQKMLALGVYP+++LADAR RRDEARKLLANG DPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KSDKVEQSEALTFKEVAIEWHSTNKKWSQEHSHRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            K+DKVEQS A TFKEVAIEW +TNKKWS++H+HRVLKSLEDNLF+A+G RNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEQSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALD  205
            LAPIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKHTPELLRRIDNYTGRPLTRLAVELTLLIFIRSSELRFARWSEIDFDTALWTIPPEREP  265
            LK+ PELL +ID+YTGRPLTR A ELTLLIFIRSSELRFARWSEIDF++++WTIPPEREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IDGVKHSHRGSKMRTPHLVPLSRQALATLKQIQQFSCDHELIFIGDHDPRKPMSENTVNK  325
            I GVKHSHRGSKMRT HLVPLSRQALA LKQI+QF   H+LIFIG+HD++KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKVVSAFDFGKVS  416
            +ER+LMLQWWADFLDANREK +S+F+++K++
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKIN  391

28) EAM_3037 in NC_013971


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  561 bits (2119),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 331/395 (84%), Positives = 371/395 (94%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVSLadararrdearKLLANSIDPGDKK  85
            MHLLVHPNGS+YWRLQYR+ GKQKMLALGVYP+++LADAR RRDEARKLLAN++DPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQEEARTFEELAVEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            KNDKVEQ  ARTF E+A+EW +TNKKWSE+H++RVLKSLEDNLF+A+G RNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMVGAVASSNRQHRPALE  205
            LAPIKAVEMSGRLEVA+RLQQRTTAIMRYAVQSGL+DYNPAQEM GAVAS NRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRTPELLQRIDSYTGRPLTCLAVELTLLVFIRSSELRFARWSEIDFETSMWMIPAEREA  265
            LKR PELL +IDSYTGRPLT  A ELTLL+FIRSSELRFARWSEIDFE+S+W IP+ERE+
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IEGVKHSQRGSKMRTPHLVPLSRQALAILEQIKTFSGDHELIFIGDHNPRKPMSENTVNK  325
            I GVKHS+RGSKMRT HLVPLSRQALAIL QIK F G H+LIFIG+H+++KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  SLRVMGYDTQIEVCGHGFRTMACSSLIESGLWSRDAVKRQMSHMERNSVRAAYIHKAEHL  385
            +LRVMGYDT++EVCGHGFRTMACSSLIESGLWSRDAV RQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKAVSPFDFAKINTSIK  420
            +ER+LMLQWWADFLDANREK++SPF++AKIN ++K
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

29) intB in NC_013961


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  561 bits (2119),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 331/395 (84%), Positives = 371/395 (94%), Gaps = 0/395 (0%)

Query  26   MHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVSLadararrdearKLLANSIDPGDKK  85
            MHLLVHPNGS+YWRLQYR+ GKQKMLALGVYP+++LADAR RRDEARKLLAN++DPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQEEARTFEELAVEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            KNDKVEQ  ARTF E+A+EW +TNKKWSE+H++RVLKSLEDNLF+A+G RNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMVGAVASSNRQHRPALE  205
            LAPIKAVEMSGRLEVA+RLQQRTTAIMRYAVQSGL+DYNPAQEM GAVAS NRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKRTPELLQRIDSYTGRPLTCLAVELTLLVFIRSSELRFARWSEIDFETSMWMIPAEREA  265
            LKR PELL +IDSYTGRPLT  A ELTLL+FIRSSELRFARWSEIDFE+S+W IP+ERE+
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IEGVKHSQRGSKMRTPHLVPLSRQALAILEQIKTFSGDHELIFIGDHNPRKPMSENTVNK  325
            I GVKHS+RGSKMRT HLVPLSRQALAIL QIK F G H+LIFIG+H+++KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  SLRVMGYDTQIEVCGHGFRTMACSSLIESGLWSRDAVKRQMSHMERNSVRAAYIHKAEHL  385
            +LRVMGYDT++EVCGHGFRTMACSSLIESGLWSRDAV RQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERKLMLQWWADFLDANREKAVSPFDFAKINTSIK  420
            +ER+LMLQWWADFLDANREK++SPF++AKIN ++K
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

30) SbBS512_E4814 in NC_010658


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  561 bits (2118),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 324/392 (83%), Positives = 362/392 (93%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEEHANRVKKSLEDNIFPAIGSHNIAELGTRD  145
            +  K EQ+K   TF  VA EW  TN+KWSE+HA+RV KSLEDN+F+A+G +NIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  205
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRIPELLQKIDEYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            ELKRIPELL KID YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKHSQRGAKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENTVN  325
            PIPGVKHS+RG+KMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD+ KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANREKGITPFDYAKIN  417
            L+ER+LMLQWWADFLDANREKGI+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

31) A225_0566 in NC_018106


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  559 bits (2110),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 328/395 (84%), Positives = 369/395 (94%), Gaps = 1/395 (0%)

Query  26   MSLLVKPNGSKYWRFRFRFGGKQHLMAFGVYPEISLANARKKREEARKLVAAGIDPREHK  85
            M LLV PNGSKYWR+++R+ GKQ ++A+GVYPEI+LA+AR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RALKEEQAKEIITFEKVAREWLATNQKWSEDHANRVKKSLEDNIFPAIGTCNIAELGTRD  145
            +  K EQ+K   TF  VA EW +TN+KWSEDHA+RV KSLEDN+F+A+G  NIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLAPIKAVEVSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASGNRQHRPAL  205
            LLAPIKAVE+SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            ELKRIPELL KID+YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            PIPGVKHS+RGSKMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWANFLDANREKSISPFDFAKINNPM  420
            L+ER+LMLQWWA+FLDANREK+ISPF++AKINNP+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPL  394

32) intB in NC_016514


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  558 bits (2108),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 328/391 (84%), Positives = 372/391 (96%), Gaps = 0/391 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVSLadararrddarKLLANSIDPGDKK  85
            MHLLVHPNGSKYWRLQYR+ GKQKMLALGVYP+++LADAR RRD+ARKLLAN++DPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKVEQEEARTFEQLAIEWHATNKKWTEEHSRRVLKSLEDNLFPAIGKRNIAELKTRDL  145
            KNDKVEQ  ARTF ++AIEW +TNKKW+E+H++RVLKSLEDNLF+A+G RNIAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMAGAVASSNRQHRPALE  205
            LAPIKAVEMSGRLEVA+RLQQRTTAIMRYAVQSGL+DYNPAQEMAGAVAS NRQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LRRTPELLQRIDSYTGRPLTRLAIELTLLVFIRSSELRFARWSEIDFETSMWTIPAEREA  265
            L+R PELL +IDSYTGRPLTR A ELTLL+FIRSSELRFARWSEIDFE+S+WTIP+ERE+
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IEGIKHSQRGSKMHTPHLVPLSRQALAILKQVHKLSGDRDFVFIGDHDHRKPMSENTVNK  325
            I G+KHS+RGSKM+T HLVPLSRQALAILKQ+ ++ G +D++FIG+HD +KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKIEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  385
            ALRVMGYDTK+EVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANREKAVSPFDFAKLS  416
            +ERRLMLQWWADFLDANREK++SPF++AK++
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKIN  391

33) intB in NC_007613


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  557 bits (2102),  Expect = 4e-160, Method: Compositional matrix adjust.
 Identities = 323/392 (83%), Positives = 361/392 (93%), Gaps = 1/392 (0%)

Query  1    MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  60
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   RAVKEEQAKEIITFEKVAREWLVTNQKWSEEHANRVKKSLEDNIFPAIGSHNIAELGTRD  120
            +  K EQ+K   TF  VA EW  TN+KWSE+HA+RV KSLEDN+F+A+G +NIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  121  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  180
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  181  ELKRIPELLQKIDEYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  240
            ELKRIPELL KID YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  241  PIPGVKHSQRGAKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENTVN  300
            PIPGVKHS+RG+KMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD+ KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  301  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  360
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  361  LDERKLMLQWWADFLDANREKGITPFDYAKIN  392
            L+ER+LMLQWWADFLDANREKGI+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

34) KO11_22995 in NC_017660


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  556 bits (2099),  Expect = 7e-160, Method: Compositional matrix adjust.
 Identities = 323/392 (83%), Positives = 362/392 (93%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+A+G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            ELKRIPELL KID+YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKYSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            PIPGVK S+RGSKMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERAITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRE++I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

35) EKO11_4043 in NC_016902


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  556 bits (2099),  Expect = 7e-160, Method: Compositional matrix adjust.
 Identities = 323/392 (83%), Positives = 362/392 (93%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+A+G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            ELKRIPELL KID+YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKYSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            PIPGVK S+RGSKMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERAITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRE++I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

36) LY180_22420 in NC_022364


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  556 bits (2099),  Expect = 7e-160, Method: Compositional matrix adjust.
 Identities = 323/392 (83%), Positives = 362/392 (93%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+A+G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            ELKRIPELL KID+YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKYSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            PIPGVK S+RGSKMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERAITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRE++I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

37) WFL_22550 in NC_017664


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  556 bits (2099),  Expect = 7e-160, Method: Compositional matrix adjust.
 Identities = 323/392 (83%), Positives = 362/392 (93%), Gaps = 1/392 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  85
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+A+G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            ELKRIPELL KID+YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKYSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            PIPGVK S+RGSKMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEH  385
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERAITPFDYAKIN  417
            L+ER+LMLQWWADFLDANRE++I+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

38) CFSAN002050_05850 in NC_021818


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  549 bits (2074),  Expect = 7e-158, Method: Compositional matrix adjust.
 Identities = 321/393 (82%), Positives = 364/393 (93%), Gaps = 1/393 (0%)

Query  26   LFLLVHANGSKYWRFRFRFGGKQHVMAFGVYPEVSLADARKKREEARKLVAAGIDPRAHK  85
            + LLVH+NGSKYWR+++R+ GKQ ++A+GVYPE++LADAR +R+EARKL+A G+DP   K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEIITFEKVARDWLATNQKWSEDHAERVKKSLEDNVFPAIGTRNIAELSTRD  145
            +  K EQ+K   TF  VA +W +TN+KWSEDHA+RV KSLEDN+F+A+G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLLPIKAVETSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASGNRKHRPAL  205
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NR+HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ALKRIPELLQKIDGYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
             LKRIPELL KID+YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPDVKHSHRGSKMHTPHLVPLSKQALAILKQIKQFCGKHELIFIGDHDPRKPMSENTVN  325
            PIP+VKHSHRGSKM+T HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEF  385
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHMERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  IDERKLMLQWWADFLDANREKGITPFDYAKINQ  418
            ++ER+LMLQWWADFLDANREKGI+PF+YAKIN+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINN  392

39) Ser39006_0951 in NC_022268


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  549 bits (2073),  Expect = 9e-158, Method: Compositional matrix adjust.
 Identities = 318/390 (82%), Positives = 361/390 (93%), Gaps = 1/390 (0%)

Query  26   MFLLVHPNGSKYWRFRFRFGGKQHLMAFGVYPEVSLADARQKREAARKLVAAGIDPREQK  85
            M LLVHPNGSKYWR+++R+ GKQ ++A+GVYPE++LADAR +R+ ARKL+A G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVQEEQAKAVFTFEFVAREWHATNKKWSEEHSRRVLKSLEDNLFSAIGKRNVAELKTRD  145
            +  + EQ+KA  TF  VA EW +TNKKWSE+H++RVLKSLEDNLF+A+G RN+AELKTRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLAPIKTVEQSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LLAPIK+VE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRTPELLQRIDSYTGRPLTRLSVELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            ELKR PELL +IDSYTGRPLTR + ELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIEGVKHSHRGSKMRTPHLVPLSRQALVILKQIQQVSGDHELIFIGDHNPRKPMSENTVN  325
            PI GVKHSHRGSKMRT HLVPLSRQAL ILKQI+Q  G H+LIFIG+H+++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  NALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  385
            +ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADFLDANREKGVSPFDFGK  415
            L+ERRLMLQWWADFLDANREKG+SPF+++K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

40) ECO103_5061 in NC_013353


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  545 bits (2058),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 323/389 (84%), Positives = 367/389 (95%), Gaps = 0/389 (0%)

Query  26   MHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVSLadararrddarKLLANGIDPGDKK  85
            MHLLVHPNGSKYWRLQYR+ GKQKMLALGVYP+++LADAR RRD+ARKLLANG+DPGDKK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KNDKIEQEEARTFEQLAIEWHATNKKWSEEHSRRVLKSLEDNLFPAIGKRNIADLKTRDL  145
            KNDK+EQ  ARTF ++AIEW +TNKKWSE+H++RVLKSLEDNLF+A+G RNIA+LKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LAPIKAVELSGRLEVASRLQQRTTAIMRYAVQSGLLDYNPAQEMVGAVASNNRQHRPALQ  205
            LAPIKAVE+SGRLEVA+RLQQRTTAIMRYAVQSGL+DYNPAQEM GAVAS NRQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LKLIPELLRRIDSYTGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETSMWTIPAEREA  265
            LK IPELL +IDSYTGRPLTR A ELTLL+FIRSSELRFARWSEIDFE+S+WTIP+ERE+
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IEGVKHSQRGSKMRTPHLVPLSHQALAILKDVYKLSGDRDFVFIGDHDHRKPMSENTVNK  325
            I GVKHS+RGSKMRT HLVPLS+QALAILK++ ++ G +D++FIG+HD +KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERSSVRAAYIHKAEHL  385
            ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMER+SVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANRESEVSPYDFGK  414
            +ERRLMLQWWADFLDANRE  +SP++++K
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

41) SARI_03082 in NC_010067


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  533 bits (2011),  Expect = 6e-153, Method: Compositional matrix adjust.
 Identities = 319/392 (82%), Positives = 361/392 (93%), Gaps = 1/392 (0%)

Query  26   MFLLVKPNGSRYWRFRFRFGGKQHLMAFGVYPDVSLADarkkreearrLVAAGIDPREHK  85
            M LLV PNGS+YWR+++R+ GKQ ++A+GVYP+++LADAR +R+EAR+L+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPAIGTRNIAELGTRD  145
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+A+G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLIPIKAVETSGRLEVASRLQQRTTAIMRYAVQSGVIDYNPAQERAGAVASSNRQHRPAL  205
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSG+IDYNPAQE AGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRIPELLEKIDGYIGRPLTRWATELTLLIFIRSSELCFARWSEIDFETSMWTIPPERE  265
            ELKRIPELL KID+Y GRPLTRWATELTLLIFIRSSEL FARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            PIPGVKHS+RGSKMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMEHNSVRAAYIHKAEH  385
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSHME+NSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRDKGITPFDYAKIN  417
            L+ER+LMLQWWADFLDANR+KGI+PF+YAKIN
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

42) CFSAN001992_11535 in NC_020307


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  532 bits (2008),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 308/390 (79%), Positives = 352/390 (91%), Gaps = 1/390 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLADARSRRDEARKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLFAA+G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLYRIDHYSGRPLTRFAVELMLLVFIRSSELRFARWTEVDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A EL LL+FIRSSELRFARW+E+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
            P+ GVKHS+RGSKMRT HLVPLSRQALAIL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREIGVSPFDFGK  415
            L ERRLMLQWWAD+LDANRE G+SPF+++K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

43) KO11_23100 in NC_017660


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  526 bits (1983),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 302/396 (77%), Positives = 354/396 (90%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++L DAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            K  KVE+ +   TF  VA EW ++N+KWS  H+ RVLKSLEDNLFAA+G RNIA+LKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQ+TTAI+R+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            EL+RIPELL +I  Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DF++++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            P+ GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR  +I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

44) EKO11_4021 in NC_016902


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  526 bits (1983),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 302/396 (77%), Positives = 354/396 (90%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++L DAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            K  KVE+ +   TF  VA EW ++N+KWS  H+ RVLKSLEDNLFAA+G RNIA+LKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQ+TTAI+R+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            EL+RIPELL +I  Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DF++++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            P+ GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR  +I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

45) LY180_22530 in NC_022364


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  526 bits (1983),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 302/396 (77%), Positives = 354/396 (90%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++L DAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            K  KVE+ +   TF  VA EW ++N+KWS  H+ RVLKSLEDNLFAA+G RNIA+LKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQ+TTAI+R+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            EL+RIPELL +I  Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DF++++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            P+ GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR  +I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

46) ECW_m4652 in NC_017635


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  526 bits (1983),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 302/396 (77%), Positives = 354/396 (90%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++L DAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            K  KVE+ +   TF  VA EW ++N+KWS  H+ RVLKSLEDNLFAA+G RNIA+LKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQ+TTAI+R+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            EL+RIPELL +I  Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DF++++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            P+ GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR  +I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

47) WFL_22655 in NC_017664


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  526 bits (1983),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 302/396 (77%), Positives = 354/396 (90%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++L DAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEHEQEVITFEVVAREWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            K  KVE+ +   TF  VA EW ++N+KWS  H+ RVLKSLEDNLFAA+G RNIA+LKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQ+TTAI+R+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLQRIYHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGERE  265
            EL+RIPELL +I  Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DF++++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLN  325
            P+ GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERMLMLQWWADYLDANRMAAITPFDYAKINSSFR  421
            L ER LMLQWWAD+LDANR  +I+PF+YAKIN++++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

48) H650_18245 in NC_021500


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  523 bits (1975),  Expect = 4e-150, Method: Compositional matrix adjust.
 Identities = 301/393 (77%), Positives = 349/393 (89%), Gaps = 1/393 (0%)

Query  26   MFLLIHPNGSIYWRFRFRFGGKQHLMAFGVYPETSLADARQKREEARKLVAAGVDPREHK  85
            M LL+HPNGS YWR+++R+ GKQ ++A+GVYPE +LADAR +R+EARKL+A GVDP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEVITFESVARDWHASNQKWSESHSGRVLKSLEDNLFDAIGKRNIAELKTRD  145
            +  K EQ+K   TF  VA +W ++N+KWSE H+ RVLKSLEDNLF A+G RNIAELKTRD
Sbjct  61   KNDKVEQSKA-RTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLIPIKAVEMSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVEMSGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDTYTGRPLTRLAVELTLLVFIRSSELRFARWSEVDFEIAMWTIPGERE  265
            EL+RIPELL +ID+YTGRPLTR A ELTLL+FIRSSELRFARWSE+DFE ++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLVPLSSQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HLVPLS QAL+IL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMVQWWADYLDVNREKGISPFDFGKKNG  418
            L ERRLM+QWWAD+LD NREKGISPF+++K N 
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINN  392

49) intB in NC_017265


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  523 bits (1975),  Expect = 5e-150, Method: Compositional matrix adjust.
 Identities = 311/394 (79%), Positives = 360/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWYASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EWY++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

50) A1122_08715 in NC_017168


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  521 bits (1964),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

51) YPA_2939 in NC_008150


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  521 bits (1964),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

52) intB in NC_003143


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  521 bits (1964),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

53) intB in NC_017154


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  521 bits (1964),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

54) intB in NC_017160


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  521 bits (1964),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

55) YPN_0651 in NC_008149


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  521 bits (1964),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

56) intB in NC_014029


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  521 bits (1964),  Expect = 3e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

57) YpAngola_A4051 in NC_010159


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  520 bits (1962),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 309/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVSTGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV++ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

58) intB in NC_005810


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  520 bits (1963),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  38   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  97
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  98   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  157
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  158  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  217
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  218  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  277
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  278  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  337
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  338  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  397
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  398  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  431
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

59) intB in NC_004088


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  520 bits (1963),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 310/394 (79%), Positives = 359/394 (92%), Gaps = 1/394 (0%)

Query  38   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  97
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  98   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  157
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  158  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  217
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  218  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  277
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  278  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  337
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  338  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  397
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  398  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  431
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

60) Entcl_3878 in NC_014618


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  520 bits (1962),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 294/390 (76%), Positives = 349/390 (90%), Gaps = 1/390 (0%)

Query  26   MFLLIHPNGSKYWRFRFRFGGKQHLMAFGVYPETSLADARQKREEARKLVAAGIDPREHK  85
            M LL+HPNGSKYWR+++R+ GKQ ++A+GVYPE +LADAR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEQQAKENITFESVAREWHAANKKWSEEHSRRVLKSLEDNLFPAIGKRSIDSFSTRD  145
            +  K +Q+K   TF  VA EW ++NKKWSE+H++RVLKSLEDNLF+A+G R+I  + TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKVVEATGRLEVASRLQQRTNAIMRYAVQSGLIDYNPAQEMAGAVASSNRVHRPAL  205
            LL PIK VE +GRLEVA+RLQQRT AIMRYAVQSGLIDYNPAQEMAGAVAS NR HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRLPELLHRIDSYTGRPLTRLAVELTLLIFIRSSELRFARWSEIDFERAMWTIPAERE  265
            ELKR+PELL +IDSYTGRPLTR A ELTLLIFIRSSELRFARWSEIDFE ++WTIP+ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIEDVKHSQRGSKMRTPHLVPLSRQALAILKQVHKLSGERDFVFIGDHNPLKPMSENTVN  325
            +I +VKHS+RGSKMRT HLVPLSRQALAILKQ+ ++ G +D++FIG+H++ KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVDVCGHGFRAMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  385
             ALRVMGYDTKV+VCGHGFR+MACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADLLDVNREREVSPYDFGK  415
            L+ERRLMLQWWAD+LD NRE+ +SP++++K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

61) YPK_3676 in NC_010465


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  518 bits (1954),  Expect = 2e-148, Method: Compositional matrix adjust.
 Identities = 315/396 (80%), Positives = 360/396 (91%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEISLadararrdearKLLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPEI+LADAR RRDEARKLLANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEMSGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLVPLSRQALAILGKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HLVPLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADDLDANRQQAISPFDYAKVNNLFK  421
            L+ERRLM+QWWAD LDANR+++ISPF+YAK+NN +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

62) YPDSF_3248 in NC_009381


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  518 bits (1954),  Expect = 2e-148, Method: Compositional matrix adjust.
 Identities = 309/394 (79%), Positives = 358/394 (91%), Gaps = 1/394 (0%)

Query  26   MVLLVHPNGSKYWRLRHRFDGKEKMLALGKYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+ R++GK+KMLALG YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQAIGKRNIADLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF A+G RNIA+L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEM+GRL+VA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLIPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HL+PLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMIQWWADYLDANREKGVSPFDFAKLNTS  419
            L+ERRLM+QWWAD+LDANREKG+SPF++AK+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

63) EC042_4741 in NC_017626


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  517 bits (1950),  Expect = 4e-148, Method: Compositional matrix adjust.
 Identities = 293/390 (76%), Positives = 348/390 (90%), Gaps = 1/390 (0%)

Query  26   MFLLIHPNGSKYWRFRFRFGGKQHLMAFGVYPETSLADARQKREEARKLVAAGIDPREHK  85
            M LL+HPNGSKYWR+++R+ GKQ ++A+GVYPE +LADAR +R+EARKL+A G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQTKEAITFESVAREWHAVNKKWTEEHSRRVLKSLEDNLFPAIGKRSIDSFSTRD  145
            +  K EQ+K A TF  VA EW + NKKW+E+H++RVLKSLEDNLF+A+G R+I  + TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKVVEATGRLEVASRLQQRTNAIMRCAVQSGLIDYNPAQEMAGAVASSNRVHRPAL  205
            LL PIK VE +GRLEVA+RLQQRT AIMR AVQSGLIDYNPAQEMAGAVAS NR HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRLPELLQRIDSYSGRPLTRLAVELTLLIFIRSSELRFARWPEIDFERAMWTIPAERE  265
            ELKR+PELL +IDSY+GRPLTR A ELTLLIFIRSSELRFARW+EIDFE ++WTIP+ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIEGVKHSERGSKMRTPHLVPLSRQALAILKQVHKLSGERDFVFVGDHNPCKPMSENTVN  325
            +I GVKHS+RGSKMRT HLVPLSRQALAILKQ+ ++ G +D++F+G+H++ KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKIEVCGHGFRTMACSSLIESGLWSRNAVERQMSHMERNSVRAAYIHKAQH  385
             ALRVMGYDTK+EVCGHGFRTMACSSLIESGLWSR+AVERQMSHMERNSVRAAYIHKA+H
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKMMLQWWADFLDVNRVKGVSPFDFAK  415
            L+ER++MLQWWADFLD NR KG+SPF++AK
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

64) PAGR_g3659 in NC_017554


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  515 bits (1942),  Expect = 2e-147, Method: Compositional matrix adjust.
 Identities = 309/392 (79%), Positives = 353/392 (91%), Gaps = 1/392 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAAKVEQEQEAITFEVVAREWHASNQKWSASHSARVLKSLEDNLFDAIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA EW ++N+KWS  H+ RVLKSLEDNLF A+G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWTEVDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARW+E+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMKTPHLVPLSRQAVAILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
            P+ GVKHS+RGSKM+T HLVPLSRQA+AIL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGVRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHG RTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADYLDANRVKGISPFDFSKNN  417
            L+ERRLMLQWWAD+LDANR KGISPF+++K N
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

65) EBL_c34780 in NC_017910


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  514 bits (1939),  Expect = 3e-147, Method: Compositional matrix adjust.
 Identities = 303/396 (77%), Positives = 356/396 (90%), Gaps = 1/396 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSTSHSARVLKSLEDNLFASVGKRNIKDIGTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLFA++G RNI ++ TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVEKSGRLEVAARLQQRTTAIMRFAVQNGLIDYNPAQEIAGAIATAKRKHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQ+GLIDYNPAQE+AGA+A+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  DLNRIPELLHRIDNYTGRPLTRLAVDLTLLVFIRSSELRFARWTEVDFETAMWTIPGERE  265
            +L+RIPELL +ID+YTGRPLTR A +LTLL+FIRSSELRFARW+E+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
            P+ GVKHS+RGSKMRT HLVPLSRQALAIL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREKGVSPFDFGNNGNVLK  421
            L ERRLMLQWWAD+LDANREKG+SPF++++  N LK
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

66) ECENHK_02620 in NC_018405


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  511 bits (1929),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 306/390 (79%), Positives = 352/390 (91%), Gaps = 1/390 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFASIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLFA++G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  LLEGVKHSQRGSKMRTPHLIPLSRQALTILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
             + GVKHS+RGSKMRT HL+PLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREKVVSPFDFAQ  415
            L ERRLMLQWWAD+LDANREK +SPF++A+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

67) H650_18115 in NC_021500


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  511 bits (1929),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 307/390 (79%), Positives = 351/390 (90%), Gaps = 1/390 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPTENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFAIIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLFA +G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFAHWSEVDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A ELTLL+FIRSSELRFA+WSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMKTPHLVPLSQQALAILEKIKSMNGNRDLIFVGDHDPRKPMSENTVN  325
            P+ GVKHS+RGSKM+T HLVPLS+QALAIL +IK   G +DLIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREIGVSPFDFGK  415
            L ERRLMLQWWAD+LDANRE G+SPF+++K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

68) KPN2242_01530 in NC_017540


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  507 bits (1913),  Expect = 4e-145, Method: Compositional matrix adjust.
 Identities = 306/396 (78%), Positives = 354/396 (90%), Gaps = 5/396 (1%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANDVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLAN+VDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFAVIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLFA +G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTTIMRYAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTT+IMRYAVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYTGRPLTRLAVELTLLVFIRSSELRFARWSEVNFETAMWTIPGERE  265
            EL+RIPELL +ID YTGRPLTR A ELTLL+FIRSSELRFARWSE++FE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSMNGNRELIFVGDHDPRK----NTVN  321
            P+ GVKHS+RGSKMRT HLVPLSRQALAIL +IK   G ++LIF+G+HD++K    NTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  322  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNTVRAAYIHKAEH  381
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS+DAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  382  LGERRLMLQWWADYLDANKMAAITPFDYAKINSPFR  417
            L ERRLMLQWWAD+LDAN+  +I+PF+YAKIN+P++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

69) ECA2879 in NC_004547


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  501 bits (1888),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 280/390 (72%), Positives = 337/390 (87%), Gaps = 1/390 (0%)

Query  26   MFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVSLSEARQKRDEARKLISAGVDPNEHK  85
            M LLVH NGSKYWRL+YR +GK+K LALGVYPE++L++AR +RDEARKL++ GVDP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKTQQQDDEQTFEAVARAWHTDNKKWSESHAERILKSLSDNIFPAIGGTHVANLKTRD  145
            K  K +Q    +TF  VA  W   NKKWSE HA+R+LKSL DN+F+A+G  ++A+LKTRD
Sbjct  61   KNDKVEQ-SKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLTPIKSVERSGRLEVAKRLKQRVTAIMTYAVQNGLIDYNPAQDMAGAIMPGKVEHRPAL  205
            LL+PIK+VE SGRLEVA RL+QR TAIM YAVQ+GLIDYNPAQ+MAGA+ + + +HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELDRLPELLGRIDGYKGREFTKWVINLSLLIFIRSSELRFARWPEIDFERSLWTIPPERE  265
            EL R+PELL +ID+Y GR +T+W  +L+LLIFIRSSELRFARW+EIDFE S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKFSERGSKMHTPHLVPLSRQALEILKKIREVSGHCELVFIGDHSSRKPVSEGTVN  325
            PIPGVK S+RGSKM+T HLVPLSRQAL ILK+I++  G  +L+FIG+H S+KP+SE TVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALQTMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  385
             AL+ MGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADFLDANRERAISAFDFAK  415
            L+ERRLMLQWWADFLDANRE++IS+F++AK
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

70) KPK_4978 in NC_011283


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  497 bits (1875),  Expect = 3e-142, Method: Compositional matrix adjust.
 Identities = 313/395 (80%), Positives = 356/395 (91%), Gaps = 1/395 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLFAA+G RNIA+LKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRlltqlaveltllvFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GR LT+ A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  LLDGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSMNGNRELIFVGDHDPRKPMSENTVN  325
             + GVKHS+RGSKMRT HLVPLSRQALAIL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMLQWWADYLDANREKIFSPFDYAKINNPL  420
            L ERRLMLQWWAD+LDANREK +SPF+YAKINNPL
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPL  394

71) YpsIP31758_3540 in NC_009708


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  497 bits (1875),  Expect = 3e-142, Method: Compositional matrix adjust.
 Identities = 297/386 (77%), Positives = 347/386 (90%), Gaps = 1/386 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGIYPEISLadararrdearKQLANGVDPSESK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG+YPEI+LADAR RRDEARK LANGVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVAREWHASNRQWSEAHSARVLKSLEDNLFQSIGKRNITDLGTRD  145
            K  KVEQ + A TF  VA EW ++N++WSE H+ RVLKSLEDNLF ++G RNI++L TRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLPPIKAVEMSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVATGKRKHRAAL  205
            LL+PIKAVEMSGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA+ +R+HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRVSELLHRIDYYSGRPLTRLAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGERE  265
            EL+R++ELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLEGVKHSHRGSKMRTPHLVPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVN  325
            P+ GVKHSHRGSKMRT HLVPLSRQALAIL +IK   G ++LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVDVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALRVMGYDTKV+VCGHGFRTMACSSLIESGLWSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMIQWWADFFGGKQAASYFTF  411
            L+ER+LM+QWWADF+++++  +   F
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

72) ECO55CA74_24440 in NC_017656


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  495 bits (1866),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 283/391 (73%), Positives = 348/391 (90%), Gaps = 1/391 (0%)

Query  26   MHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVSLGEARRKRDEAKKLVSDGIDPSEKK  85
            MHLL++PNGSKYWRLQYR++GKQK+LALGVYP ++L++AR +RDEA+KL+++G+DP++KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKIEQSEALTFESVARDWHKACKRKWSDSHSERVLKSMEDGLFTAIGKRKISELNTRD  145
            K DK+EQS A TF  VA +W  + ++KWS+ H++RVLKS+ED LF+A+G R+I+EL+TRD
Sbjct  61   KNDKVEQSKARTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRVHRPAL  205
            LLAPIKAVE SGRLEVA+RLQQRTTA+MRYAVQ+GLIDYNPAQEMAGA+A  +R HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  PFERFSELLARIDSFKGRkltklavkltllIFIRSSELRFARWSEIDFENAMWTIPGERE  265
             + R++ELL++IDS+ GR LT+ A  LTLLIFIRSSELRFARWSEIDFE ++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLPGVKHSHRGSKMRTPHLVPLSCQALAVLTKIKEISGDHELVFIGDHNFRKPMSENTVN  325
            P+PGVKHSHRGSKMRT HLVPLS QALA+L +IK++ G H+L+FIG+H+ +KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRAMGYDTTVEVCGHGFRAMACSALIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
             ALR MGYDT VEVCGHGFR+MACS+LIESGLWS+DAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADYLDLLRIRQVSPFDFKKT  416
            L+ER+LMLQWWAD+LD  R + +SPF++ K 
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKI  390

73) ETAF_2789 in NC_017309


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  493 bits (1859),  Expect = 7e-141, Method: Compositional matrix adjust.
 Identities = 283/391 (73%), Positives = 346/391 (89%), Gaps = 1/391 (0%)

Query  26   MHLLINPNGSKYWRLQYRFGGKQKVLALGVYPMVSLGEARRKRDEAKKLVFDGIDPSEKK  85
            MHLL++PNGSKYWRLQYR+ GKQK+LALGVYP ++L++AR +RDEA+KL+ +G+DP++KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKIEQSEALTFEAVARDWHTACKRKWSDSHSERVLKSMEDGLFTAIGKRKISELNTRD  145
            K DK+EQS A TF  VA +W  + ++KWS+ H++RVLKS+ED LF+A+G R+I+EL+TRD
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRVHRPAL  205
            LLAPIKAVE SGRLEVA+RLQQRTTA+MRYAVQ+GLIDYNPAQEMAGA+A  +R HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  PFERFSELLERIDSFKGRkltklavkltllIFIRSSELRFARWSEIDFDNAMWTIPAERE  265
             + R++ELL +IDS+ GR LT+ A  LTLLIFIRSSELRFARWSEIDF+ ++WTIP+ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLPGVKHSHRGSKMRTPHLVPLSCQALAVLTEIKEISGDHELVFIGDHDFRKPMSENTVN  325
            P+PGVKHSHRGSKMRT HLVPLS QALA+L +IK++ G H+L+FIG+HD +KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRSMGYDTTVEVCGHGFRAMACSALIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
             ALR MGYDT VEVCGHGFR+MACS+LIESGLWS+DAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADYLDLLRIRQVSPFDFKKT  416
            L+ER+LMLQWWAD+LD  R + +SPF++ K 
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKI  390

74) MU9_135 in NC_020418


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  493 bits (1858),  Expect = 8e-141, Method: Compositional matrix adjust.
 Identities = 310/396 (79%), Positives = 359/396 (91%), Gaps = 1/396 (0%)

Query  26   MHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDISLaearekrdaarkLIANGFDPSekr  85
            MHL+VH NGSKYWRLQYR+ GKQKMLALGVYP+I+LA+AR +RD ARKL+ANG DP++K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kevkeeqqkeFNTFEKVARDWHATNKKWSEGHSHRVLKSLEDNIFTAIGKRNIAELKTRD  145
            K+ K EQ K   TF  VA +W +TNKKWSE+H+HRVLKSLEDN+F+A+G RNIAELKTRD
Sbjct  61   KNDKVEQSKA-RTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLEPIKAVEMSGRLEVAARLQQRVTAIMRYAVQSGLIDYNPAQDMAGAVATGKRVHRAAL  205
            LL PIKAVEMSGRLEVAARLQQR TAIMRYAVQSGLIDYNPAQ+MAGAVA+ +R HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRLPEFLQRIDDYKGRPltklavkltllvFIRSSELRFARWDEIDFENAMWTIPAERE  265
            ELKR+PE+L +ID Y GRPLT+ A  LTLL+FIRSSELRFARW EIDFE ++WTIP+ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIEGVKHSHRGSKMRTTHLVPLSRQAIEILKQIYQFSGNHELIFIGDHNPRKPMSENTVN  325
            +I GVKHSHRGSKMRTTHLVPLSRQA+ ILKQI QF G H+LIFIG+H+++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  NALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            +ALRVMGYDTK EVCGHGFRTMACSSLIESGLWS+DAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  IDERRLMVQWWADYLDANLEQTISPFDFAKFNNPMN  421
            ++ERRLM+QWWAD+LDAN E+ ISPF++AK+NNP++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

75) W5S_0472 in NC_017845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  492 bits (1854),  Expect = 1e-140, Method: Compositional matrix adjust.
 Identities = 284/334 (86%), Positives = 315/334 (95%), Gaps = 0/334 (0%)

Query  32   TDKIEQSEALTFRDVAIEWHATNKKWSEEHSRRVLKSLEDNLFSAIGKRNIAELKTRDLL  91
             DK+EQS A TF++VAIEW +TNKKWSE+H++RVLKSLEDNLF+A+G RNIAELKTRDLL
Sbjct  62   NDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLL  121

Query  92   APIKVVEQSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALEL  151
            APIK VE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPALEL
Sbjct  122  APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALEL  181

Query  152  KHTPKLLQRIDNYTGRPLTRLAAELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREPI  211
            K+ P LL +ID+YTGRPLTR A+ELTLLIFIRSSELRFARWSEIDFE+S+WTIPPEREPI
Sbjct  182  KRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI  241

Query  212  EGVKHSHRGSKMRTPHLVPLSRQALVILKQIQQFSGDHELIFIGDHDPRKPMSENTVNKA  271
             GVKHSHRGSKMRT HLVPLSRQAL ILKQI+QF G H+LIFIG+HD++KPMSENTVN A
Sbjct  242  PGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNSA  301

Query  272  LRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLD  331
            LRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL+
Sbjct  302  LRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLE  361

Query  332  ERKLMLQWWADFLDANREKAVSAFDFGKVSNQLK  365
            ER+LMLQWWADFLDANREK++S+F+++K++N LK
Sbjct  362  ERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

76) ETAC_14745 in NC_020796


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  492 bits (1855),  Expect = 1e-140, Method: Compositional matrix adjust.
 Identities = 282/391 (73%), Positives = 346/391 (89%), Gaps = 1/391 (0%)

Query  26   MHLLVNPNGSKYWRLQYRFNGKQKILALGVYPTVSLGEARRKRDEAKKLVSDGIDPSEKK  85
            MHLLV+PNGSKYWRLQYR++GKQK+LALGVYP ++L++AR +RDEA+KL+++G+DP++KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKIEQSEALTFESVARDWHTACKRKWSDSHSERVLKSMEDGLFTAIGRRKISELNTRD  145
            K DK+EQS A TF  VA +W  + ++KWS+ H++RVLKS+ED LF+A+G R+I+EL+TRD
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLAPIKAVEASGRLEVAARLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRVHRPAL  205
            LLAPIKAVE SGRLEVAARLQQRTTA+MRYAVQ+GLIDYNPAQEMAGA+A  +R HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  PFERFSELLERIDSFKGRkltklavkltllIFIRSSELRFARWSEIDFDNAMWTIPGERE  265
             + R++ELL +IDS+ GR LT+ A  LTLLIFIRSSELRFARWSEIDF+ ++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLPGVKHSHRGSKMKTPHLVPLSRQALELLKAIREISGECDLVFIGDHDFRKPMSENTVN  325
            P+PGVKHSHRGSKM+T HLVPLSRQAL +LK I+++ G  DL+FIG+HD +KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRSMGYDTTAEVCGHGFRAMACSALIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
             ALR MGYDT  EVCGHGFR+MACS+LIESGLWS+DAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  IDERKLMLQWWADYLDLLRIRQVSPFDFKRI  416
            ++ER+LMLQWWAD+LD  R + +SPF++ +I
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKI  390

77) int in NC_011741


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  492 bits (1856),  Expect = 1e-140, Method: Compositional matrix adjust.
 Identities = 281/389 (73%), Positives = 348/389 (90%), Gaps = 1/389 (0%)

Query  26   MHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVSLGEARRKRDEAKKLVSDGIDPSEKK  85
            MHLL++PNGSKYWRLQYR++GKQK+LALGVYP ++L++AR +RDEA+KL+++G+DP++KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKIEQSEALTFEAVARDWHTACKRKWSDSHSERVLKSMEDGLFTAIGRRKISELNTRD  145
            K DK+EQS A TF  VA +W  + ++KWS+ H++RVLKS+ED LF+A+G R+I+EL+TRD
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRVHRPAL  205
            LLAPIKAVE SGRLEVA+RLQQRTTA+MRYAVQ+GLIDYNPAQEMAGA+A  +R HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  PFERFSELLERIDSFKGRkltklavkltllIFIRSSELRFARWSEIDFDNAMWTIPGERE  265
             + R++ELL +IDS+ GR LT+ A  LTLLIFIRSSELRFARWSEIDF+ ++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLPGVKHSHRGSKMKTPHLVPLSRQALELLKDIREISGECELVFIGDHDFRKPMSENTVN  325
            P+PGVKHSHRGSKM+T HLVPLSRQAL +LK+I+++ G  +L+FIG+HD +KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRSMGYDTTVEVCGHGFRAMACSALIESGKWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALR MGYDT VEVCGHGFR+MACS+LIESG WSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADYLNALKDRFISPFDFT  414
            L+ERRLMLQWWAD+L+A +++ ISPF+++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYA  388

78) CKO_03532 in NC_009792


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  491 bits (1850),  Expect = 3e-140, Method: Compositional matrix adjust.
 Identities = 280/388 (73%), Positives = 342/388 (89%), Gaps = 1/388 (0%)

Query  26   MHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVSLGEARRKRDEAKKLVSVGIDPSEKK  85
            MHLL++PNGSKYWRLQYR++GKQK+LALGVYP ++L++AR +RDEA+KL++ G+DP++KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKIEQSEALTFEAVARDWHTACKRKWSDSHSERVLKSMEDGLFTTIGKRKISELNTRD  145
            K DK+EQS A TF  VA +W  + ++KWS+ H++RVLKS+ED LF+++G R+I+EL+TRD
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQNGLIDYNPAQEMAGAIAVAKRIHRPAL  205
            LLAPIKAVE SGRLEVA+RLQQRTTA+MRYAVQ+GLIDYNPAQEMAGA+A  +R HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  PFERFSELLERIDNFKGRkltklavkltllIFIRSSELRFARWSEIDFENAMWTIPGERE  265
             + R++ELL +ID++ GR LT+ A  LTLLIFIRSSELRFARWSEIDFE ++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLPGVKHSHRGSKMKTPHLVPLSRQALELLKAIREISGEFDLVFIGDHDFRKPMSENTVN  325
            P+PGVKHSHRGSKM+T HLVPLSRQAL +LK I+++ G  DL+FIG+HD +KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRSMGYDTTVEVCGHGFRAMACSALIESGKWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALR MGYDT VEVCGHGFR+MACS+LIESG WSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADYLDETTKRRIAPFDF  413
            L+ERRLMLQWWAD+LD    + I+PF++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEY  387

79) intB in NC_010554


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  488 bits (1840),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 307/395 (78%), Positives = 354/395 (90%), Gaps = 1/395 (0%)

Query  26   MHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDISLaearekrdaarkLIANGFDPSekr  85
            MHL+VH NGSKYWRLQYR+ GKQKMLALGVYP+I+LA+AR +RD ARKL+ANG DP++K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kevkeeqqkeFNTFEKVARDWHATNQRWSEGHSHRVLKSLEDNIFVAIGKRNIAELKTRD  145
            K+ K EQ K   TF  VA +W +TN++WSE+H+HRVLKSLEDN+F A+G RNIAELKTRD
Sbjct  61   KNDKVEQSKA-RTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLEPIKAVEMSGRLEVAARLQQRVTAIMRYAVQSGLIDYNPAQDMAGAVATGKRVHRAAL  205
            LL PIKAVEMSGRLEVAARLQQR TAIMRYAVQSGLIDYNPAQ+MAGAVA+ +R HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRLPEFLERIDDYKGRPltklavkltllvFIRSSELRFARWDEIDFENAMWTIPAERE  265
            ELKR+PE+L +ID Y GRPLT+ A  LTLL+FIRSSELRFARW EIDFE ++WTIP+ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIEGVKHSHRGSKMRTTHLVPLSRQAIEILKQIYQFSGNHELIFIGDHNPRKPMSENTVN  325
            +I GVKHSHRGSKMRTTHLVPLSRQA+ ILKQI QF G H+LIFIG+H+++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  NALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            +ALRVMGYDTK EVCGHGFRTMACSSLIESGLWS+DAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  IEERRLMVQWWADYLDASRGGEISPFSFAKISNEI  420
            +EERRLM+QWWAD+LDA+R   ISPF +AKI+N +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNPL  394

80) SFV_4227 in NC_008258


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  486 bits (1833),  Expect = 7e-139, Method: Compositional matrix adjust.
 Identities = 292/369 (80%), Positives = 334/369 (91%), Gaps = 1/369 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR++GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLF+A+G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSEIDFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
             + GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMFE  394
            L ERRLM++
Sbjct  360  LEERRLMLQ  368

81) SPC_4619 in NC_012125


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  486 bits (1833),  Expect = 7e-139, Method: Compositional matrix adjust.
 Identities = 278/390 (72%), Positives = 341/390 (88%), Gaps = 1/390 (0%)

Query  26   MHLLINPNGSKYWRLQYRFGGKQKVLALGVYPMVSLGEARRKRDEAKKLVSDGIDPSEKK  85
            MHLL++PNGSKYWRLQYR+ GKQK+LALGVYP ++L++AR +RDEA+KL+++G+DP++KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKIEQSEALTFEAVARDWHTACKRKWSDFHSERVLKSLEDNLFSSIGQRKIAELKTKD  145
            K DK+EQS A TF  VA +W  + ++KWS+ H++RVLKSLEDNLF+++G+R+IAELKT+D
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLDPVKTVAASGRLEVAARLQQRTTVIMRYAVQNGLIDYNPAQEMSGAIAVAKRTHRPAL  205
            LL P+K+V  SGRLEVAARLQQRTT IMRYAVQ+GLIDYNPAQEM+GA+A  +R HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  PFDRFSELLERIESFKGRkltklavkltllIFIRSSELRFARWSEIDFVNAMWTIPGERE  265
             + R++ELL +I+S+ GR LT+ A  LTLLIFIRSSELRFARWSEIDF  ++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PLPGVKHSHRGSKMKTPHLVPLSRQALELLKAIREISGECDLVFIGDHDFRKPMSENTVN  325
            P+PGVKHSHRGSKM+T HLVPLSRQAL +LK I+++ G  DL+FIG+HD +KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRSMGYDTTVEVCGHGFRAMACSALIESGKWSRDAVERQMSHQERNSVRAAYIHKAEH  385
             ALR MGYDT VEVCGHGFR+MACS+LIESG WSRDAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADYLDETTKRRIAPFDFDK  415
            L+ER+LMLQWWAD+LD    + I+PF++ K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

82) SFxv_4606 in NC_017328


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  483 bits (1822),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 292/369 (80%), Positives = 333/369 (91%), Gaps = 1/369 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLF+A+G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSEIDFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
             + GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMFE  394
            L ERRLM++
Sbjct  360  LEERRLMLQ  368

83) S4839 in NC_004741


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  483 bits (1822),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 292/369 (80%), Positives = 333/369 (91%), Gaps = 1/369 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLF+A+G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSEIDFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
             + GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMFE  394
            L ERRLM++
Sbjct  360  LEERRLMLQ  368

84) SF4224 in NC_004337


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  483 bits (1822),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 292/369 (80%), Positives = 333/369 (91%), Gaps = 1/369 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLF+A+G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELRFARWSEIDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A ELTLL+FIRSSELRFARWSEIDFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
             + GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEH  385
             ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSH ER+SVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LGERRLMFE  394
            L ERRLM++
Sbjct  360  LEERRLMLQ  368

85) c5216 in NC_004431


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  483 bits (1821),  Expect = 6e-138, Method: Compositional matrix adjust.
 Identities = 267/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

86) int in NC_011745


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  482 bits (1818),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 341/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSNELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRS+ELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRDKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANR+KGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

87) ECO26_4069 in NC_013361


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  482 bits (1819),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 341/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYANVNNPLR  420
            EERRLMLQWWADFLDANREKGISPFEYA++NNPL+
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

88) APECO1_3534 in NC_008563


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  482 bits (1816),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

89) CE10_4872 in NC_017646


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  482 bits (1816),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

90) int in NC_011742


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  482 bits (1816),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

91) W5S_1543 in NC_017845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1804),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 278/393 (71%), Positives = 336/393 (86%), Gaps = 1/393 (0%)

Query  26   MFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVSLSEARQKRDEARKLIAAGVDPNEHK  85
            M LLVH NGSKYWRL+YR +GK+K LALGVYPE++L++AR +RDEARKL+A GVDP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKTQQQDDEQTFEAVARAWHTDNKKWSESHAERILKSLSDNIFPAIGSKHISDLKTRD  145
            K  K +Q    +TF  VA  W   NKKWSE HA+R+LKSL DN+F+A+G ++I++LKTRD
Sbjct  61   KNDKVEQ-SKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLRPIKSVERSGRLEVAKRLKQRVTAIMTYAVQNGLIDYNPAQDMAGAIMPGKVEHrpal  205
            LL PIK+VE SGRLEVA RL+QR TAIM YAVQ+GLIDYNPAQ+MAGA+ + + +HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  alerlpellGRIDGYKGREFTKWVINLSLLIFIRSSELRFARWPEIDFERALWTIPPERE  265
             L R+PELL +ID+Y GR +T+W  +L+LLIFIRSSELRFARW+EIDFE ++WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKFSERGSKMHTPHLVPLSRQALEILTKIREVSGHCELVFIGDHSSRKPVSEGTVN  325
            PIPGVK S+RGSKM+T HLVPLSRQAL IL +I++  G  +L+FIG+H S+KP+SE TVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALQTMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  385
             AL+ MGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERRLMLQWWADFLDANRERGVSPFDFGKLTT  418
            L+ERRLMLQWWADFLDANRE+G+SPF+++K+  
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINN  392

92) EcE24377A_3314 in NC_009801


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1806),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 265/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLIHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LL+HPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

93) int in NC_011750


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1805),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 265/395 (68%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWRADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQW+ADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

94) ROD_50201 in NC_013716


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1805),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTIKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLNANREKCISPFDYAKINNPLK  420
            EERRLMLQWWADFL+ANREK ISPF+YAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

95) S70_06120 in NC_017731


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1804),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 260/395 (66%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   LHLLVHSNGSKYWRLRYRHLGKEKTLALGLYPDVSLSEARLKRDEARKLIADGIDPCEQK  85
            +HLLVH+NGSKYWRL+YR  GK+K LALG+YP+++L++AR++RDEARKL+A+G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVAKAASDANLSFETIARQWHASNKKWSESHSEKVLKSLESHVFPYIGLRDITTLKTPDL  145
            +  K       +F  +A +W ++NKKWSE H+++VLKSLE ++F+ +G R+I+ LKT DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPIRAAESKEIYEIAARLQQRIAAVMRYAVQSGIIGYNPAIDTAGAVTTVQRQHRPALN  205
            L PI+A E     E+AARLQQR +A+MRYAVQSG+I+YNPA + AGAV++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LDRLPELITRIDAYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDFDKALWTIPAQRKP  265
            L R+PEL+T+ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEIDF+ ++WTIP++R P
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKFSHRGAKMRTPHLVPLSHQAITILKEIWAWTGEHELILTGAHNPFKPMSENTVNK  325
            IPGVK SHRG+KMRT HLVPLS+QA++ILK+I    G H+LI+ G H++ KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKTEICGHGFRTMACSSLVESGLWSKDAVERQMSHQERNSVRAAYIHKAEHI  385
            ALRVMGYDTK E+CGHGFRTMACSSL+ESGLWS+DAVERQMSH ERNSVRAAYIHKAEH+
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DQRRLMVQWWADYLDANREQTISPFDFAKLNNPMN  420
            ++RRLM+QWWAD+LDANRE+ ISPF++AK+NNP++
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

96) EC042_4610 in NC_017626


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1807),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

97) int in NC_011748


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1807),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

98) O3M_04655 in NC_018650


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1807),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

99) O3O_21040 in NC_018661


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1807),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

100) O3K_04610 in NC_018658


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1807),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

101) UMNK88_3667 in NC_017641


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  479 bits (1807),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 266/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

102) EC042_3174 in NC_017626


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  478 bits (1803),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTRDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

103) ECP_2962 in NC_008253


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  478 bits (1802),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSRMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGS+MRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

104) EcolC_3878 in NC_010468


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  478 bits (1802),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLRTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVTLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRGMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALR MGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

105) S70_13465 in NC_017731


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  478 bits (1802),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 260/395 (66%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   LHLLVHTNGSKYWRLRYRHLGKEKTLALGLYPDVSLSEARLKRDEARKLIADGIDPCEQK  85
            +HLLVH NGSKYWRL+YR  GK+K LALG+YP+++L++AR++RDEARKL+A+G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVAKAASDANLSFETIARQWHASNKKWSESHSEKVLKSLESHVFPYIGLRDITTLKTPDL  145
            +  K       +F  +A +W ++NKKWSE H+++VLKSLE ++F+ +G R+I+ LKT DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPIRAAESKEIYEIAARLQQRIAAVMRYAVQSGIIGYNPAIDTAGAVTTVQRQHRPALN  205
            L PI+A E     E+AARLQQR +A+MRYAVQSG+I+YNPA + AGAV++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LDRLPELIARIDAYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDFDKALWTIPAERKP  265
            L R+PEL+++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEIDF+ ++WTIP+ER P
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKFSHRGAKMRTPHLVPLSHQAITILKEIWAWTGEHELILTGAHNPFKPMSENTVNK  325
            IPGVK SHRG+KMRT HLVPLS+QA++ILK+I    G H+LI+ G H++ KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKTEICGHGFRTMACSSLVESGLWSKDAVERQMSHQERNSVRAAYIHKAEHI  385
            ALRVMGYDTK E+CGHGFRTMACSSL+ESGLWS+DAVERQMSH ERNSVRAAYIHKAEH+
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DQRRLMVQWWADYLDANREQTISPFDFAKLNNPMN  420
            ++RRLM+QWWAD+LDANRE+ ISPF++AK+NNP++
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

106) Pecwa_1669 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  478 bits (1801),  Expect = 3e-136, Method: Compositional matrix adjust.
 Identities = 279/392 (72%), Positives = 339/392 (87%), Gaps = 1/392 (0%)

Query  26   MFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVSLSEARQKRDEARKLIAAGVDPNEHK  85
            M LLVH NGSKYWRL+YR +GK+K LALGVYPE++L++AR +RDEARKL+A GVDP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKTQQQDDAQTFEVVARAWHADNKKWSGSHAERILKSLSDNIFPAIGGAHIANLKTRD  145
            K  K +Q   A+TF  VA  W + NKKWS  HA+R+LKSL DN+F+A+G  +IA+LKTRD
Sbjct  61   KNDKVEQ-SKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLTPIKSVERSGRLEVAKRLKQRVTAIMTYAVQNGLIDYNPAQDMAGAIMPGKVEHrpal  205
            LL+PIK+VE SGRLEVA RL+QR TAIM YAVQ+GLIDYNPAQ+MAGA+ + + +HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  alerlpellGRIDGYKGREFTKWVINLSLLIFIRSSELRFARWPEIDFERALWTIPPERE  265
             L R+PELL +ID+Y GR +T+W  +L+LLIFIRSSELRFARW+EIDFE ++WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKFSERGSKMHTPHLVPLSRQALEILKKIREVSGHCELVFIGDHSSRKPVSEGTVN  325
            PIPGVK S+RGSKM+T HLVPLSRQAL ILK+I++  G  +L+FIG+H S+KP+SE TVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALQTMGYDTKTEVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNGVRAAYIHKAEH  385
             AL+ MGYDTK EVCGHGFRTMACSSLIESGLWSRDAVERQMSH ERN+VRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDERKLMLQWWADFLDANRERGVSPFDFGKVK  417
            L+ER+LMLQWWADFLDANRE+G+SPF+++K++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

107) ECO103_3550 in NC_013353


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  477 bits (1799),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

108) ECO103_4929 in NC_013353


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  477 bits (1799),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

109) ECO111_5079 in NC_013364


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  477 bits (1799),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

110) E2348C_3220 in NC_011601


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  477 bits (1799),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

111) ECO26_5300 in NC_013361


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  477 bits (1799),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 339/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

112) c3556 in NC_004431


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  476 bits (1796),  Expect = 6e-136, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRINSYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERKP  265
            L R+PELL++I+SY G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+ER P
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

113) MU9_117 in NC_020418


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  476 bits (1795),  Expect = 8e-136, Method: Compositional matrix adjust.
 Identities = 302/390 (78%), Positives = 348/390 (90%), Gaps = 1/390 (0%)

Query  26   MHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDISLaearekrdaarkLIANGFDPSekr  85
            MHL+VH NGSKYWRLQYR+ GKQKMLALGVYP+I+LA+AR +RD ARKL+ANG DP++K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kevkeeqqkeFNTFEKVARDWHATNKKWSEGHSHRVLKSLEDNIFAAIDKRNIAELKTRD  145
            K+ K EQ K   TF  VA +W +TNKKWSE+H+HRVLKSLEDN+FAA++ RNIAELKTRD
Sbjct  61   KNDKVEQSKA-RTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLEPIKAVEMSGRLGVAARLQQRVTGIMRYAVQSGLIDYNPAQDMAGAVATGKRVHRAAL  205
            LL PIKAVEMSGRL VAARLQQR T+IMRYAVQSGLIDYNPAQ+MAGAVA+ +R HR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRLPEFLQRIDDYKGRPltklavkltllvFIRSSELRFARWDEIDFENAMWTIPAERE  265
            ELKR+PE+L +ID Y GRPLT+ A  LTLL+FIRSSELRFARW EIDFE ++WTIP+ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIEGVKHSHRGSKMRTPHLVPLSRQAIEILKQIYQFSGNHELIFIGDHNPRKPMSENTVN  325
            +I GVKHSHRGSKMRT HLVPLSRQA+ ILKQI QF G H+LIFIG+H+++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  NALRVMGYDTKTEVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEH  385
            +ALRVMGYDTK EVCGHGFRTMACSSLIESGLWS+DAVERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  IEERRLMVQWWADFLFENTHALITPYEFAK  415
            +EERRLM+QWWADFL  N +  I+P+E+AK
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

114) ETEC_4481 in NC_017633


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  476 bits (1794),  Expect = 9e-136, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  120
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALN  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  300
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDANREQCISPFEYAKINNPLR  395
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPL+
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

115) ECABU_c32560 in NC_017631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1791),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

116) int in NC_008563


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1791),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

117) i14_3273 in NC_017652


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1791),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

118) i02_3273 in NC_017651


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1791),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

119) ECED1_3430 in NC_011745


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREQCISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

120) int in NC_017644


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1791),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

121) ECH74115_4272 in NC_011353


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LAL VYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

122) Z4313 in NC_002655


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LAL VYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

123) ECs3843 in NC_002695


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LAL VYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

124) ECSP_3940 in NC_013008


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LAL VYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

125) intB in NC_013941


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LAL VYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

126) ECO55CA74_17295 in NC_017656


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LAL VYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

127) CE10_3417 in NC_017646


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1791),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

128) ECS88_4720 in NC_011742


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1791),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

129) CDCO157_3594 in NC_017906


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  475 bits (1790),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LAL VYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANRERFISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

130) ETEC_3157 in NC_017633


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  474 bits (1786),  Expect = 3e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 0/395 (0%)

Query  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  61   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  120
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  121  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  180
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  181  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  240
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  241  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  300
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  301  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  360
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  361  EERRLMLQWWADFLDANREQCISPFEYAKINNPLK  395
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

131) int in NC_011750


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  474 bits (1788),  Expect = 3e-135, Method: Compositional matrix adjust.
 Identities = 262/395 (67%), Positives = 337/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPISKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVP+S+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

132) YpsIP31758_0809 in NC_009708


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  474 bits (1786),  Expect = 4e-135, Method: Compositional matrix adjust.
 Identities = 262/389 (68%), Positives = 332/389 (86%), Gaps = 0/389 (0%)

Query  26   MHLLVHPNGSKYWRLRYRYLGKENTLALGVYPALSLSEARAKRDAARKLIAEGSDPSEVK  85
            MHLLVHPNGSKYWRL+YRY GK++ LALGVYP ++L++AR +RD ARKL+A+G DP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKALPDATQTFEVIARRWHAANKQWSEQHSAKVLKNLEMYLFPVNGTRDIASLRTPDL  145
            +  K     ++TF  +A  W ++NK+WSE+H+ +VLK+LE  LF+  G R+IA L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPIRVAENAGFLEVSARLLQRTTAIMRYAVQCGIIDYNPAQDMVGALTTVKRVHRPALE  205
            L PI+  E +G LEV+ARL QRTTAIMRYAVQ G+IDYNPAQ+M GA+++ +R HRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LNRIPELLSRIEGYKGQPLTRLAVMLNLFVFIRSSELRYARWSEIDTERALWTIPAEREP  265
            L+RIPELL++I++Y G+PLTR A  L L++FIRSSELR+ARWSEID E ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKFSHRGSKMRTTHLVPLSQQSLAMLEELRLSGGESGLIFPGDHDPRKPISENTINK  325
            IPGVK SHRGSKMRTTHLVPLS+Q+LA+L +++   G  +LIF G+HD++KP+SENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRLMGYETKTEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEFL  385
            ALR+MGY+TK EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAE L
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDTNREIAVSPFDFAK  414
            +ERRLMLQWWADFLD+NRE ++SPF++AK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

133) ECO111_3718 in NC_013364


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  474 bits (1785),  Expect = 4e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 338/395 (86%), Gaps = 2/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKR--ARKLISEGIDPCEQK  83
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +R  ARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  84   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  143
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  144  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  203
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  204  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  263
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  264  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK  323
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  324  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  383
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  384  EERRLMLQWWADFLDANREKFISPFEYAKINNPLK  418
            EERRLMLQWWADFLDANREK ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

134) EcolC_0747 in NC_010468


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  473 bits (1784),  Expect = 5e-135, Method: Compositional matrix adjust.
 Identities = 264/395 (67%), Positives = 337/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGLPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++ID+Y G P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  +VCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREQCISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANRE+ ISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

135) ECUMN_3322 in NC_011751


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  472 bits (1779),  Expect = 1e-134, Method: Compositional matrix adjust.
 Identities = 263/395 (67%), Positives = 337/395 (86%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E+    E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAELEP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ ++WTIP+E EP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK S RGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREECISPFEYAKVNNPLK  420
            EERRLMLQWWADFLDANRE  ISPFEYAK+NNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

136) EAE_09085 in NC_015663


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  468 bits (1765),  Expect = 2e-133, Method: Compositional matrix adjust.
 Identities = 266/392 (68%), Positives = 330/392 (85%), Gaps = 0/392 (0%)

Query  26   MFLLVHPNGSRYWRLRYRFLGKEKTLALGVYPEVSLSEAREKRDTARKLIAEGTDPCEHK  85
            M LLVHPNGS+YWRL+YR+ GK+K LALGVYPE++L++AR +RD ARKL+A+G DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RIKKSVPETAQTFEGIARQWHKSNKKWSDSHSEKILKSLETHVFPFIGSRDITTLRTPDL  145
            +  K     A+TF  +A +W  +NKKWS+ H++++LKSLE ++F+ +G R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LVPVkaaeakeiyeiaaRLQQRITAIMRYAAQSGIITYNPAVDMAGALTTVKRQHRPALA  205
            L P+KA E     E+AARLQQR TAIMRYA QSG+I YNPA +MAGA+++ +RQHRPAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LNRISELLERLDAYRGQPLTRLATKLTLLIFIRSSELRFARWSEIDFKKAMWTIPPERKP  265
            L+RI+ELL ++D+Y G+PLTR AT LTLLIFIRSSELRFARWSEIDF  ++WTIPPER P
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IEGVKYSHRGSKMRTEHLVPLSTQALDILQQIHTISGEYELIFTGDHNPWKPMSENTVNN  325
            I GVK SHRGSKMRT HLVPLS QAL IL+QI  + G  +LIF G+H++ KPMSENTVN+
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRLMGYDTKIDVCGHGFRAMACSSLIESGLWSRDAVERQMSHQERNGVRAAYIHKAEFL  385
            ALR+MGYDTK++VCGHGFR+MACSSLIESGLWSRDAVERQMSH ERN+VRAAYIHKAE L
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANEEKTVSPFDFAKLHS  417
            +ERRLMLQWWADFLDAN EK +SPF++AK+++
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINN  392

137) Ser39006_3432 in NC_022268


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  465 bits (1752),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 255/389 (66%), Positives = 328/389 (85%), Gaps = 0/389 (0%)

Query  26   MHLLVHTNGSKYWRFQYRFAGKQKMLALGVYPSVSLAEARERRDNARKLIANGIDPSEKK  85
            MHLLVH NGSKYWR+QYR+ GKQKMLALGVYP ++LA+AR RRD+ARKL+ANG+DP++KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKIEESGALTFETVARSWHSSNKTWSEGHRTLILNSLTTHVFPIIGQRNVTDLKTRDL  145
            K DK+E+S A TF  VA  W ++NK WSE+H   +L+SL  ++F+ +G+RN+++LKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LVPVKKAEQTGHLELASRLQQRITAIMRYAVHNALIEHNPAYDLAGAIATVKSVHRPALS  205
            L P+K  E +G+LE+A+RLQQR TAIMRYAV+++LI+ NPA ++AGA+A+ +  HRPAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LERIAELMERIEAYKGKGLTQLAVRLCLLTFIRSSELRFARWSEFDFKNALWTIPAEREP  265
            L RI+EL+ +I++Y G+ LT+ A  L LL FIRSSELRFARWSE+DF  ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LKNIKFSHRGSKMKSPHLVPLSKQSLAILKEIKAISGAHKFVFTGFSYADKPISENTINK  325
            +  +K SHRGSKM++ HLVPLS+Q+LAILK+IK + GAH ++F G   ++KP+SENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRAMGYNTQKDVCCHGFRTMACSALIESGLWSRDAVERQMSHQERSSVRAAYIHKAEHL  385
            ALR MGY+T+ +VC HGFRTMACS+LIESGLWSRDAVERQMSH ER+SVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERRLMLQWWANFLDANSNCMIRPFEFAK  414
            +ERRLMLQWWA+FLDAN +  I PFE+AK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

138) ECABU_c49370 in NC_017631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  464 bits (1750),  Expect = 2e-132, Method: Compositional matrix adjust.
 Identities = 269/332 (82%), Positives = 302/332 (91%), Gaps = 1/332 (0%)

Query  26   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVTAGIDPREHK  85
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL++ G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGARNIAELGTRD  145
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+++G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  205
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELKRIPELLQKIDDYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  265
            ELKRIPELL KID YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  325
            PIPGVKHS+RGSKMRT HLVPLS+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  357
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGL
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  331

139) c5371 in NC_004431


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  464 bits (1748),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 268/332 (81%), Positives = 302/332 (91%), Gaps = 1/332 (0%)

Query  52   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVTAGIDPREHK  111
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL++ G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  112  RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGARNIAELGTRD  171
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+++G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  172  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  231
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  232  ELKRIPELLQKIDDYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  291
            ELKRIPELL KID YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  292  PIPGVKHSQRGSKMRTPHLVPFSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  351
            PIPGVKHS+RGSKMRT HLVP+S+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  352  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGL
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  331

140) i14_4891 in NC_017652


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  464 bits (1748),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 268/332 (81%), Positives = 302/332 (91%), Gaps = 1/332 (0%)

Query  52   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVTAGIDPREHK  111
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL++ G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  112  RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGARNIAELGTRD  171
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+++G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  172  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  231
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  232  ELKRIPELLQKIDDYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  291
            ELKRIPELL KID YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  292  PIPGVKHSQRGSKMRTPHLVPFSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  351
            PIPGVKHS+RGSKMRT HLVP+S+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  352  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGL
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  331

141) i02_4891 in NC_017651


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  464 bits (1748),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 268/332 (81%), Positives = 302/332 (91%), Gaps = 1/332 (0%)

Query  52   MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVTAGIDPREHK  111
            M LLV P GSKYWR+++R+ GKQ ++A+GVYP+++LADAR +R+EARKL++ G+DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  112  RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGARNIAELGTRD  171
            +  K EQ+K   TF  VA EW  TN+KWSEDHA+RV KSLEDN+F+++G RNIAEL TRD
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  172  LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPAL  231
            LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS NRQHRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  232  ELKRIPELLQKIDDYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPERE  291
            ELKRIPELL KID YTGRPLTRWATELTLLIFIRSSELRFARWSEIDFE+S+WTIPPERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  292  PIPGVKHSQRGSKMRTPHLVPFSKQALAILKQIKQFCGEHELIFIGDHDPRKPMSENTVN  351
            PIPGVKHS+RGSKMRT HLVP+S+QALAILKQIKQFCG H+LIFIG+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  352  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
            SALRVMGYDTKVEVCGHGFRTMACSSLIESGL
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGL  331

142) int in NC_011748


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  458 bits (1724),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 268/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ S+WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

143) O3M_22875 in NC_018650


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  458 bits (1724),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 268/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ S+WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

144) O3K_22970 in NC_018658


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  458 bits (1724),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 268/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ S+WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

145) SFxv_3245 in NC_017328


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  458 bits (1724),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 268/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ S+WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

146) S4822 in NC_004741


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  458 bits (1724),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 268/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ S+WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

147) SF2964 in NC_004337


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  458 bits (1724),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 268/395 (68%), Positives = 340/395 (87%), Gaps = 0/395 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++G+DP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHrpale  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPALE
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lsrlpellsRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREP  265
            L R+PELL++ID+Y G+P+TR A  L LL+FIRSSELR+ARWSEID++ S+WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNK  325
            +PGVK SHRGSKMRT HLVPLS+Q +AIL +++   G ++LIF G HD++KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHL  385
            ALRVMGYDT  EVCGHGFR+MACS+LIESGLWSRDAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  420
            EERRLMLQWWADFLDANREKGISPFEYAKINNPLK
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

148) intB in NC_017390


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  441 bits (1660),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 262/379 (70%), Positives = 321/379 (85%), Gaps = 0/379 (0%)

Query  26   MYLLIHPNGSKYWRMQYRFGGKQKTLALGVYPAVSLSDARQRRDEAKKLLAKGTDPVVKK  85
            M LL+HPNGSKYWR+QYR+ GKQK LALGVYP ++L+DAR RRDEA+KLLA+G DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QDDKRENSGTFSFESVARQWHAGNKKWSEEYKGKILRTLETYLFPVIGNRHIAELKTRDL  145
            ++DK E+S + +F  VA +W + NKKWSE+   ++L++LE  LF+ +G+R+IAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LVPIKAVEDKGFNEVAMRLQQRTTAIMRYAVLQGILDYNPAQEMSGAITTGKRAHRPALP  205
            L PIKAVE  G  EVA RLQQRTTAIMRYAV  G++DYNPAQEM+GA+++ +R HRPAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  FERYHEFLERIDSYrkrlltrlavkltlltFIRSSELRFARWSEIDFKKSLWTIPGEREA  265
            + R  E+L +IDSY  R LTR A  LTLL FIRSSELRFARWSEIDF  S+WTIP ERE+
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGIKNAHRGAKMKTPHLVPLSRQAIAILREIQEISGDHNFIFIGDHYADKPMSENTVNK  325
            +PG+K++HRG+KM+T HLVPLSRQA+AIL++I+++ G H++IFIG+H ++KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRTMGYDTQKDVCGHGFRTMACSSLIESGKWSKDAVERQMSHQELNNVRAAYTHQAEHL  385
            ALR MGYDT+ +VCGHGFRTMACSSLIESG WS+DAVERQMSH E N+VRAAY H+AEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANRE  404
            +ERRLMLQWWADFLDANRE
Sbjct  361  EERRLMLQWWADFLDANRE  379

149) EpC_14570 in NC_012214


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  441 bits (1660),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 262/379 (70%), Positives = 321/379 (85%), Gaps = 0/379 (0%)

Query  26   MYLLIHPNGSKYWRMQYRFGGKQKTLALGVYPAVSLSDARQRRDEAKKLLAKGTDPVVKK  85
            M LL+HPNGSKYWR+QYR+ GKQK LALGVYP ++L+DAR RRDEA+KLLA+G DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QDDKRENSGTFSFESVARQWHAGNKKWSEEYKGKILRTLETYLFPVIGNRHIAELKTRDL  145
            ++DK E+S + +F  VA +W + NKKWSE+   ++L++LE  LF+ +G+R+IAELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LVPIKAVEDKGFNEVAMRLQQRTTAIMRYAVLQGILDYNPAQEMSGAITTGKRAHRPALP  205
            L PIKAVE  G  EVA RLQQRTTAIMRYAV  G++DYNPAQEM+GA+++ +R HRPAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  FERYHEFLERIDSYrkrlltrlavkltlltFIRSSELRFARWSEIDFKKSLWTIPGEREA  265
            + R  E+L +IDSY  R LTR A  LTLL FIRSSELRFARWSEIDF  S+WTIP ERE+
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGIKNAHRGAKMKTPHLVPLSRQAIAILREIQEISGDHNFIFIGDHYADKPMSENTVNK  325
            +PG+K++HRG+KM+T HLVPLSRQA+AIL++I+++ G H++IFIG+H ++KPMSENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRTMGYDTQKDVCGHGFRTMACSSLIESGKWSKDAVERQMSHQELNNVRAAYTHQAEHL  385
            ALR MGYDT+ +VCGHGFRTMACSSLIESG WS+DAVERQMSH E N+VRAAY H+AEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERRLMLQWWADFLDANRE  404
            +ERRLMLQWWADFLDANRE
Sbjct  361  EERRLMLQWWADFLDANRE  379

150) CFSAN002050_22445 in NC_021818


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  437 bits (1645),  Expect = 5e-124, Method: Compositional matrix adjust.
 Identities = 234/389 (61%), Positives = 319/389 (83%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWQLKYRFGGKEKKLAFGAYPTVTLANARKLREEARAVLSTGDDPGVKK  85
            + LL+ PNGSK W+L+YR+ GK+K LA+G YP +TLA+AR  R+EAR +L+ G DPG KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QQEKQAKKSGNTFEEVARKWLAGNIRWTEAHAAKALRSLELHVFPLIGKIPVTDLKTADL  145
            +++K  +  + TF EVA  W + N +W+E HA + L+SLE ++F+ +G   +++LKT DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPLRVAERKGNLETAARIQQRTTAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALP  205
            L P++  E  G LE AAR+QQRTTAIMRYAVQ +LI  NPA++++GA+A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LEKMPELLERLEGYSGRLLTRLAVQLNLLIFIRSSELRFARWAEIDLDGAMWTIPAGREP  265
            L ++PELL ++++Y+GR LTR A +L LLIFIRSSELRFARW+EID+++++WTIP+ REP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVRYSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINK  325
            IPGV+ S+RG+KM+T HLVPLS+QA+++LKQ+K + G  +L+F G+HD++KPMSENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVDVCGHGFRTMACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHL  385
            ALRVMGYDTKV+VCGHGFRTMACS+LIESG WS+DAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACRQKFVAPYRYDR  414
            +ER  M+QWW+D+LDA R+K ++P+ Y +
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

151) SARI_03312 in NC_010067


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  436 bits (1642),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 234/389 (61%), Positives = 321/389 (83%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVTLANARKLREEARAVLSAGDDPGVKK  85
            + LL+ PNGSK W+L+YR+ GK+K LA+G YP +TLA+AR  R+EAR +L+ G DPG KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QQEKQAKKSGNTFEEVARRWLAGNIRWTEHHAAKILRSLELHVFPLIGNIPVADLKTADL  145
            +++K  +  + TF EVA  W + N +W+E+HA ++L+SLE ++F+ +G+  +A+LKT DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPLRVAEKKGNLETAARSQQRTTAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALP  205
            L P++  E  G LE AAR QQRTTAIMRYAVQ +LI  NPA++++GA+A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LEQIPQLLERLEGYSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDGAMWTIPTQRES  265
            L +IP+LL ++++Y+GR LTR A +L LLIFIRSSELRFARW+EID+++++WTIP +RE+
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVRYSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINK  325
            IPGV+ S+RG+KM+T HLVPLS+QA+++LKQ+K + G  +L+F G+HD++KPMSENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRVMGYDTKVDVCGHGFRTMACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHL  385
            ALRVMGYDTKV+VCGHGFRTMACS+LIESG WS+DAVERQMSH ERN+VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACRQKFVAPYRYDR  414
            +ER  M+QWW+D+LDA R+K ++P+ Y +
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

152) Ent638_2887 in NC_009436


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  430 bits (1619),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 247/388 (64%), Positives = 324/388 (84%), Gaps = 0/388 (0%)

Query  26   MHLLVQPSGSKYWRLQYRFSGKQKMLALGVYPEVSLSearrrreearQLIANNVDPGEKR  85
            MHLLV+P+GSKYWRLQYR+ GKQKMLALGVYPE++L++AR RR+EAR+L+AN VDPG+K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KTKKIEEKGLLIFETVARDWHSSNRTWSDSHRKTVLSSLITHVFPVIGKRNITELKTRDL  145
            K  K+E+     F  VA +W ++N+ WS+ H   VL SL  ++F+ +G RNI+ELKTRDL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LVPLKKAEATGHLELAARLQQRITAIMRYAVHNALVDQNPAYDLTGAVTTAKSNHRPAlp  205
            L P+K  E +G+LE+AARLQQR TAIMRYAV+++L+D NPA +++GAV++ + +HRPAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  leqlpellKRIGTYKGKGITQIAVQLTLLTFIRSSELRFARWSEVNFKNSLWTIPAERQV  265
            L ++PELL +I++Y G+ +T+ A +LTLL FIRSSELRFARWSE++F  S+WTIP+ER+ 
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LDGVKYSGRGSKMKTPHLVPLSKQAVVLLKKLHAISGENELMFVGFSRDDKPISENTVNK  325
            + GVK S RGSKM+T HLVPLS+QA+ +LK++  + G ++L+F+G    +KP+SENTVN 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRTMGYDTKKDVCGHGFRTMACSALIESGLWSRDAVEKQMSHQERNSVRAAYIHKAEHL  385
            ALR MGYDTK +VCGHGFRTMACS+LIESGLWSRDAVE+QMSH ERNSVRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  EERKLMLQWWANYLDTCKEEAITPFTYA  413
            EER+LMLQWWA++LD+ +E +I+PF YA
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYA  388

153) plu4477 in NC_005126


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  426 bits (1605),  Expect = 8e-121, Method: Compositional matrix adjust.
 Identities = 241/390 (62%), Positives = 326/390 (84%), Gaps = 3/390 (0%)

Query  26   LYLMISPGGSKRWYLKYRFEGKESRIAFGAYPLISLAKAREKRDEVRLLLADGINPAEKR  85
            + L++ P GSK W L+YR+EGK+  +A+G YP I+LA AR +RDE R LLA+G++P++K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   GEGKKEAQDALITFEKVARDWHRNISQNRWSETHAGRVWRDMERNILPAIGHRHIADLKT  145
             ++K E   A  TF  VA +W    ++++WSE HA RV + +E N+++A+G+R+IA+LKT
Sbjct  61   KNDKVEQSKA-RTFKEVAIEWY--GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  KDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLSGAIAPPKATHRP  205
            +DLL P+KAVE +G+L++A+RL+QR T IMRYAVQ++LI+ NPAQ+++GA+A+ +  HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  ALKLDKLPDFLARIENYKGRTLTTLALKFTLCVFIRSSELRFARWTEIDFKRAMWTIPAE  265
            AL L ++P++L++I++Y GR LT  A  +TL +FIRSSELRFARW+EIDF  ++WTIP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  REAIPGVKHSQRGAKMRTEHLVPLSRQALALLKEIQAISGGHELIFPGDRRPTKPMSENT  325
            RE+IPGVKHS+RG+KMRT HLVPLSRQALA+LK+I+ + G+H+LIF G++ + KPMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  326  VNNALRVMGYDTTTELCGHGFRTMACSALVESGQWSRDAVERQMSHQERDSVRAAYIHKA  385
            VN+ALRVMGYDT  E+CGHGFRTMACS+L+ESG WSRDAVERQMSH ER+SVRAAYIHKA
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  386  EHIEERRLMLQWWADYLDANREGYVVPYEF  415
            EH+EERRLMLQWWAD+LDANRE  + P+E+
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFEY  387

154) Dd1591_3702 in NC_012912


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  419 bits (1579),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 245/393 (63%), Positives = 326/393 (83%), Gaps = 3/393 (0%)

Query  26   LYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLISLAKAREKRDEVRLLLSEGIHPTEKR  85
            + LLV PNGSK W L+YR+EGK+  +A+G YP I+LA AR +RDE R LL++G++P +K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   EEEKEQAQDAQNTFEKVARDWHRNISQNRWSQTHAGRVWRDIERNILPAIGQRHIADLKT  145
             ++K + Q    TF  VA +W    ++++WS+ HA RV + +E N+++A+G+R+IA+LKT
Sbjct  61   KNDKVE-QSKARTFKEVAIEWY--GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  KDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLTGAIAAPKATHRP  205
            +DLL P+KAVE +G+L++A+RL+QR T IMRYAVQ++LI+ NPAQ+++GA+A+ +  HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  ALKLDKLPDFLAQIERYkgraltrlalkltlCVFIRSSELRFARWPEIDFKRAMWTIPPE  265
            AL L ++P++L++I+ Y GR+LTR A  LTL +FIRSSELRFARW+EIDF  ++WTIPPE
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  REAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEIKAISGVHELIFPGDHRPTKPMSENT  325
            RE+IPGVKHS+RG+KMR+ HLVPLSRQALA+L +IK + G H+LIF G+H + KPMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  326  INSALRTMGYDTTTEVCGHGFRTMACSALVESGQWSRDAVERQMSHQERNGVRAAYIHKA  385
            +NSALR MGYDT  EVCGHGFRTMACS+L+ESG WSRDAVERQMSH ERN+VRAAYIHKA
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  386  EHLEERKLMLQWWADYLDANREEHVVPYEFKNI  418
            EHLEER+LMLQWWAD+LDANRE  + P+E+ +I
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFEYAKI  390

155) intB in NC_004547


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  416 bits (1567),  Expect = 8e-118, Method: Compositional matrix adjust.
 Identities = 240/398 (61%), Positives = 313/398 (79%), Gaps = 9/398 (2%)

Query  26   MHLLVHPNGSKYWRLSYRFEKKQRLLALGVYPAVSLADARQRRDEAKKLLAAGIDPSAKK  85
            MHLLVHPNGSKYWRL YR+E KQ++LALGVYP ++LADAR RRDEA+KLLA G+DP+ KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADNKTIQEKRNNTRAFKTVAKSWFSTKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            + D+  +++ +  +R+FK VA  W++T+  WSED  + V   LE  LF+ +G+++IAEL 
Sbjct  61   KNDK--VEQSK--ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLAPIKKIEKLGYLEIAMRVKQYTTAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLLAPIK +E  G LE+A R++Q TTAIMRYAVQ  +I +NPA ++ GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAIELEEIPTLLERIEGYQGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA+EL  IP LL +I++Y GR+ LT+ A  L LLIF+RSSELRFARWSEIDF +++W IP
Sbjct  177  PALELKRIPELLTKIDSYTGRP-LTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  EQRQAIEGIKHSGRGAKMRRKHYVPLCDQALAILEELKDLTYDVNGDDGFILTGCYDAMK  325
             +R++I G+KHS RG+KMR  H VPL  QALAIL ++K++     G +++I+ G  D+ K
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            PMSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESG+W+ D VE QMSHME+N+VRA
Sbjct  292  PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANRNGMVRPFEFAQ  423
            AY HKA HLE+RRLMLQWWADFLDANR+  + PFE+A+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

156) Dd703_3541 in NC_012880


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  414 bits (1560),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 243/393 (62%), Positives = 326/393 (83%), Gaps = 3/393 (0%)

Query  26   LYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLISLAKAREKRDEVRLLLSEGIHPTEKR  85
            + LLV PNGSK W L+YR+EGK+  +A+G YP I+LA AR +RDE R LL++G++P +K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   EEEKEQAQDALNTFEKVARDWHRNISQNRWSQTHAGRVWRDMERNILPAIGQRHIADLKT  145
             ++K +   A  TF  VA +W    ++++WS+ HA RV + +E N+++A+G+R+IA+LKT
Sbjct  61   KNDKVEQSKA-RTFKEVAIEWY--GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  KDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLTGAIAAPKATHRP  205
            +DLL P+KAVE +G+L++A+RL+QR T IMRYAVQ++LI+ NPAQ+++GA+A+ +  HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  ALKLDKLPDFLARIECYkgraltrlalkltlCVFIRSSELRFARWPEIDFKRAMWTIPPE  265
            AL L ++P++L++I+ Y GR+LTR A  LTL +FIRSSELRFARW+EIDF  ++WTIPPE
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  REAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEIKAISGAHELVFPGDHRPIKPMSENT  325
            RE+IPGVKHS+RG+KMR+ HLVPLSRQALA+L +IK + GAH+L+F G+H + KPMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  326  INSALRTMGYDTTTEVCGHGFRTMACSALVESGQWSRDAVARQMSHQEHNGVRAAYIHKA  385
            +NSALR MGYDT  EVCGHGFRTMACS+L+ESG WSRDAV RQMSH E+N+VRAAYIHKA
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  386  EHLEERKLMLQWWADYLDANREEYVVPYEFKNI  418
            EHLEER+LMLQWWAD+LDANRE  + P+E+ +I
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFEYAKI  390

157) Pecwa_1586 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  410 bits (1541),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 236/398 (60%), Positives = 310/398 (78%), Gaps = 9/398 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVSLADARQRRDEAKKLLAAGIDPSAKK  85
            + LLVHPNGSKYW+L YR+EGKQK++++GVYP ++LADAR RRDEA+KLLA G+DP+ KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADNKIVQERRNNTRAFKTVAKSWFTTKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            + D K+ Q +   +R+FK VA  W+ T+  WSED  + V   LE  LF+ +G+++IAEL 
Sbjct  61   KND-KVEQSK---ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL PIK +E  G LE+A R++Q +TAIMRYAVQ  +I +NPA ++ GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAIELEEIPTLLERIEAYKGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA+EL  IP LL +I++Y GR+ LT+ A  L LLIF+RSSELRFARWSEIDF +++W IP
Sbjct  177  PALELKRIPELLTKIDSYTGRP-LTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  EQREAIKGIKHSGRGAKMRRKHYVPLCHQALAILEELKDLTYDVNGDDGFILTGCYDAMK  325
             +RE+I G+KHS RG+KMR  H VPL +QALAIL ++K++     G +++I+ G  D+ K
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            PMSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESG+W+ D VE QMSHME+N+VRA
Sbjct  292  PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANSNGMVRPFEFAQ  423
            AY HKA HLE+RRLMLQWWADFLDAN +  + PFE+A+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

158) STBHUCCB_9400 in NC_016832


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  410 bits (1544),  Expect = 5e-116, Method: Compositional matrix adjust.
 Identities = 237/396 (60%), Positives = 302/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            M L V P+GSKYW++ YR+EGKQK++++GVYP ++L+DAR RRDEAR+LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELD  145
            + +    K  + ++R+F+ VA  W++T+ KWS+D ++ V K LE  +F+ +G++++AEL 
Sbjct  61   KND----KVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL P+K VE  G LEVA R+QQ  TAI+R AVQ  LI  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP+LL KI  Y GR LT  A +L L+IFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRKHLVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  HLVPL +QA+ ILK+I+Q  +  +HD  LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQ--FCGAHD--LIFIGNHDSHKP  292

Query  326  MSENTINKALRNMGYDTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDANSNDMVRPFEFD  421
            Y HKA HL++RRLMLQWWADFLDAN +  + PFE+ 
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYA  388

159) TY21A_04490 in NC_021176


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  410 bits (1544),  Expect = 5e-116, Method: Compositional matrix adjust.
 Identities = 237/396 (60%), Positives = 302/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            M L V P+GSKYW++ YR+EGKQK++++GVYP ++L+DAR RRDEAR+LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELD  145
            + +    K  + ++R+F+ VA  W++T+ KWS+D ++ V K LE  +F+ +G++++AEL 
Sbjct  61   KND----KVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL P+K VE  G LEVA R+QQ  TAI+R AVQ  LI  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP+LL KI  Y GR LT  A +L L+IFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRKHLVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  HLVPL +QA+ ILK+I+Q  +  +HD  LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQ--FCGAHD--LIFIGNHDSHKP  292

Query  326  MSENTINKALRNMGYDTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDANSNDMVRPFEFD  421
            Y HKA HL++RRLMLQWWADFLDAN +  + PFE+ 
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYA  388

160) t05065 in NC_004631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  410 bits (1544),  Expect = 5e-116, Method: Compositional matrix adjust.
 Identities = 237/396 (60%), Positives = 302/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            M L V P+GSKYW++ YR+EGKQK++++GVYP ++L+DAR RRDEAR+LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELD  145
            + +    K  + ++R+F+ VA  W++T+ KWS+D ++ V K LE  +F+ +G++++AEL 
Sbjct  61   KND----KVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL P+K VE  G LEVA R+QQ  TAI+R AVQ  LI  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP+LL KI  Y GR LT  A +L L+IFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRKHLVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  HLVPL +QA+ ILK+I+Q  +  +HD  LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQ--FCGAHD--LIFIGNHDSHKP  292

Query  326  MSENTINKALRNMGYDTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDANSNDMVRPFEFD  421
            Y HKA HL++RRLMLQWWADFLDAN +  + PFE+ 
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYA  388

161) int in NC_011745


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  409 bits (1540),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 236/396 (60%), Positives = 304/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            M L V P+GSKYW++ YR+EGKQK++++GVYP ++L+DAR RRDEAR+LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPVIGDKDVAELD  145
            + +    K  + ++R+F+ VA  W++T+ KWS+D ++ V K LE  +F+ +G++++AEL 
Sbjct  61   KND----KVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKVEALGYLEVAMRIQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL P+K VE  G LEVA R+QQ  TAI+R AVQ  LI  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP+LL KI  Y GR LT  A +L L+IFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRKHFVPLCKQAMKILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  H+VPL +QA+ ILK+I+Q  +  +HD  LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQ--FCGAHD--LIFIGNHDSHKP  292

Query  326  MSENTINKALRNMGYNTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGY+TK ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLEQRRLMLQWWADYLDASRNGMVRPFEFA  421
            Y HKA HLE+RRLMLQWWAD+LDA+R+  + PFE+A
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYA  388

162) W5S_1599 in NC_017845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  409 bits (1539),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 235/398 (60%), Positives = 309/398 (78%), Gaps = 9/398 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFQGKQKVFSIGVYPAVSLADARQRRDEAKKLLAAGIDPSAKK  85
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA+KLLA G+DP+ KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADNKIVQERRNNTRAFKTVAKSWFATKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            + D K+ Q +   +R+FK VA  W++T+  WSED  + V   LE  LF+ +G+++IAEL 
Sbjct  61   KND-KVEQSK---ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKHQTEHR  205
            T DLL PIK +E  G LE+A R++Q +TAIMRYAVQ  +I +NPA ++ GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAIELEEIPTLLERIEAYKGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA+EL  IP LL +I++Y GR+ LT+ A  L LLIF+RSSELRFARWSEIDF +++W IP
Sbjct  177  PALELKRIPELLTKIDSYTGRP-LTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  EERETIEGIKHSGRGAKMRRKHYVPLCNQALAILEELKDLTYDVNGDDGFILTGCYDAMK  325
             ERE I G+KHS RG+KMR  H VPL  QALAIL ++K++     G +++I+ G  D+ K
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            PMSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESG+W+ D VE QMSHME+N+VRA
Sbjct  292  PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANSNGMVRPFEFGQ  423
            AY HKA HLE+RRLMLQWWADFLDAN +  + PFE+++
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

163) Dd703_2459 in NC_012880


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  409 bits (1540),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 233/398 (59%), Positives = 311/398 (79%), Gaps = 9/398 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVSLADARQRRDEAKKLLAAGIDPSAKK  85
            + LLVHPNGSKYW+L YR+EGKQK++++GVYP ++LADAR RRDEA+KLLA G+DP+ KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADNKTIQEKRNNTRAFKTVAKSWFATKTTWSEDYQRSVWTRLETYLFPDIGNKDISELD  145
            + D+  +++ +  +R+FK VA  W++T+  WSED  + V   LE  LF+ +G+++I+EL 
Sbjct  61   KNDK--VEQSK--ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL PIK +E  G LE+A R++Q +TAIMRYAVQ  +I +NPA ++ GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAIELEEIPTLLERIESYKGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA+EL  IP LL +I+SY GR+ LT+ A  L LLIF+RSSELRFARWSEIDF +++W IP
Sbjct  177  PALELKRIPELLTKIDSYTGRP-LTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  EQREAIEGIKHSGRGAKMRRKHYVPLCDQALAILEELKDLTYDVNGDEGFILTGCYDAMK  325
             +RE+I G+KHS RG+KMR  H VPL  QALAIL ++K++     G +++I+ G  D+ K
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            PMSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESG+W+ D VE QMSHME+N+VRA
Sbjct  292  PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANSNGMVRPFEFSQ  423
            AY HKA HLE+RRLMLQWWADFLDAN +  + PFE+++
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

164) A79E_1796 in NC_018522


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  408 bits (1535),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 237/396 (60%), Positives = 304/396 (77%), Gaps = 8/396 (2%)

Query  26   MFLRVTPKGSKYWQMAYRFEGKQKLFSIGVYPAVSLSDARQRRDEARRLLAQGIDPNAKK  85
            M L V P+GSKYW++ YR+EGKQK++++GVYP ++L+DAR RRDEAR+LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QAEVKELKAKRDNTRSFRTVAKAWFSTKTKWSDDYGDAVWKRLETYVFPAIGDKDVAELD  145
            + +    K  + ++R+F+ VA  W++T+ KWS+D ++ V K LE  +F+A+G++++AEL 
Sbjct  61   KND----KVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKVEALGYLEVAMRTQQYITAILRHAVQQKLIRHNPAYDMEGAVQKPQTEHR  205
            T DLL P+K VE  G LEVA R QQ  TAI+R AVQ  LI  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PALELEEIPQLLNKIAEYKGRRLTILAIQLNLMIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP+LL KI  Y GR LT  A +L L+IFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRKHFVPLCKQAIRILKEIRQLTYEEGHDDGLIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  H+VPL +QA+ ILK+I+Q  +  +HD  LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQ--FCGAHD--LIFIGNHDSHKP  292

Query  326  MSENTINKALRNMGYNTKQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGY+TK ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLEQRRLMLQWWADYLDASRNGMVRPFEFA  421
            Y HKA HLE+RRLMLQWWAD+LDA+R+  + PFE+A
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYA  388

165) Pecwa_1766 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  408 bits (1536),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 233/398 (59%), Positives = 311/398 (79%), Gaps = 9/398 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVSLADARQRRDDAKKLLAAGIDPSAKK  85
            + LLVHPNGSKYW+L YR+EGKQK++++GVYP ++LADAR RRD+A+KLLA G+DP+ KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RADNKSVQEKRNNTRAFKTVAKSWFATKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            + D+  V++ +  +R+FK VA  W++T+  WSED  + V   LE  LF+ +G+++IAEL 
Sbjct  61   KNDK--VEQSK--ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL PIK +E  G LE+A R++Q +TAIMRYAVQ  +I +NPA ++ GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAIELEEIPTLLERIDGYQGRSRLTQLAIKLNLLIFVRSSELRFARWSEIDFKSALWVIP  265
            PA+EL  IP LL +ID+Y GR+ LT+ A  L LLIF+RSSELRFARWSEIDF +++W IP
Sbjct  177  PALELKRIPELLTKIDSYTGRP-LTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  EQREAIKGIKHSGRGAKMHRKHYVPLCDQALAILEELKDLTYDVNGDDGFILTGCYDAMK  325
             +RE+I G+KHS RG+KM+  H VPL  QALAIL ++K++     G +++I+ G  D+ K
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            PMSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESG+W+ D VE QMSHME+N+VRA
Sbjct  292  PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANSNGMVRPFEFSN  423
            AY HKA HLE+RRLMLQWWADFLDAN +  + PFE+++
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

166) ECOK1_4788 in NC_017628


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  407 bits (1531),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 233/397 (59%), Positives = 314/397 (80%), Gaps = 2/397 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKV  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   VQKEARAENSGAYTFEAIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L+Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMMQWWADYLDMNRNKYITPYDYSKYKEILK  422
            HL+ERRLM+QWWAD+LD NR+K I+P++Y+K ++ LK
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINNPLK  395

167) SEEB0189_19950 in NC_021844


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  406 bits (1527),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 234/394 (60%), Positives = 311/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW  +NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERNSVRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANKIKPISSFDYAKLHS  419
            HL+ERRLM+QWWAD+LDAN+ K IS+F+YAK+++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

168) Dda3937_03406 in NC_014500


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  406 bits (1526),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 226/389 (59%), Positives = 317/389 (82%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVSLANARKLREEARTILSAGDDPGVKK  85
            + LL+ PNGSK W+L+YR+ GK+K LA+G YP ++LA+AR  R+EAR +L+ G DPG KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QHDKQAKKNGNTFEAIARQWVAANIRWSEAHAAKVLRSLELHVFPLIGNVLVTDLKTANL  145
            ++DK  + ++ TF  +A +W ++N +WSE HA +VL+SLE ++F+ +G+  +++LKT +L
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPLRVAEKKGCLETAARIQQRTTVIMRYAVQEGLIASNPANDLCGAITPPPKNHYPAlp  205
            L P++  E  G LE AAR+QQRTT IMRYAVQ GLI  NPA+++ GA+++  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIEGYSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDNAMWTLPAQREP  265
            L R+PELL +I++Y+GR LTR A +L LLIFIRSSELRFARW+EID++ ++WT+P++REP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  ITGVRHSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNGDLLFPGDHDARKPMSENTINK  325
            I GV+HS+RG+KM+T HLVPLS+QA+++LKQ+K + G  DL+F G+HD++KPMSENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRTMGYDTQADICGHGFRTIACSALIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHL  385
            ALR MGYDT+ ++CGHGFRT+ACS+LIESG WS+DAVERQMSH ERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDVCQHQFIPAYRFEK  414
            +ER  M+QWW+D+LD  +++ I+++ + K
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

169) SSPA3984 in NC_011147


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  406 bits (1529),  Expect = 8e-115, Method: Compositional matrix adjust.
 Identities = 234/394 (60%), Positives = 311/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW  +NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERNSVRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANKIKPISSFDYAKLHS  419
            HL+ERRLM+QWWAD+LDAN+ K IS+F+YAK+++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

170) int in NC_006511


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  406 bits (1529),  Expect = 8e-115, Method: Compositional matrix adjust.
 Identities = 234/394 (60%), Positives = 311/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHESNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW  +NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNSVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERNSVRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANKIKPISSFDYAKLHS  419
            HL+ERRLM+QWWAD+LDAN+ K IS+F+YAK+++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

171) intB in NC_004547


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  406 bits (1529),  Expect = 9e-115, Method: Compositional matrix adjust.
 Identities = 234/398 (59%), Positives = 309/398 (78%), Gaps = 9/398 (2%)

Query  26   LYLLVHTNGSKYWQLGYRFEGKQKVFSIGVYPAVSLANARQRRDEAKKLLAAGVDPSAKK  85
            + LLVH NGSKYW+L YR+EGKQK++++GVYP ++LA+AR RRDEA+KLLA GVDP+ KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RADNKSVQEKRNNTRAFKTVAKSWFATKTTWSEDYQRSVWTRLETYLFPDIGNKDIAELD  145
            + D+  V++ +  +R+FK VA  W++T+  WSED  + V   LE  LF+ +G+++IAEL 
Sbjct  61   KNDK--VEQSK--ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYAVQQKMIRFNPAYDLEGAVQKPQTEHR  205
            T DLL PIK +E  G LE+A R++Q +TAIMRYAVQ  +I +NPA ++ GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAIELEEIPTLLERIEGYKGRSRLTQLAIKLNLLIFIRSSELRFARWSEIDFKSGLWVIP  265
            PA+EL  IP LL +I++Y GR+ LT+ A  L LLIFIRSSELRFARWSEIDF +++W IP
Sbjct  177  PALELKRIPELLTKIDSYTGRP-LTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  EQREAIKGIKHSDRGAKMRRKHYVPLCEQALVILGELKDLTYDVNGDDGFILTGCYDAMK  325
             +RE+I G+KHS+RG+KMR  H VPL  QAL IL ++K++     G +++I+ G  D+ K
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHK  291

Query  326  PMSENTINKALRKMGYDTKTDLCGHGFRTLACSALIESGIWPEDVVELQMSHMEKNNVRA  385
            PMSENT+N ALR MGYDTK ++CGHGFRT+ACS+LIESG+W+ D VE QMSHME+N+VRA
Sbjct  292  PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  386  AYTHKAKHLEQRRLMLQWWADFLDANGSGMVRPFEFAQ  423
            AY HKA HLE+RRLMLQWWADFLDAN    + PFE+A+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

172) ECO26_5435 in NC_013361


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  405 bits (1522),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 229/392 (59%), Positives = 312/392 (80%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPMVTLAQARAKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRILRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  R+L+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFSEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L   R++E+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDAAKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHTERNNVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADFLEANRNNSVTPYEFAKF  417
            HL+ERRLM+QWWADFL+ANR+++++P+E+AK+
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKI  390

173) Dd586_0881 in NC_013592


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  404 bits (1519),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 227/389 (59%), Positives = 314/389 (81%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTASLATARKLREEARAVLCAGADPGVKK  85
            + LL+ PNGSK W+L+YR+ GK+K LA+G YP  +LA AR  R+EAR +L  G DPG KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QQDKQARKNGNTFETVSRQWVAANIRWTEAHAAKVLRSLELHVFPLIGKTPLTDLKTADL  145
            ++DK  + ++ TF  V+ +W ++N +W+E HA +VL+SLE ++F+ +G   +++LKT DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPLRVAEKKGCLETAARIQQRTTVIMRYAVQEGLIASNPANDLCGAITTPPKNHYPAlp  205
            L P++  E  G LE AAR+QQRTT IMRYAVQ GLI  NPA+++ GA+++  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIEGYSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDNAMWTLPAQREP  265
            L R+PELL +I++Y+GR LTR A +L LLIFIRSSELRFARW+EID++ ++WT+P++REP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  ITGVRHSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNGDLLFPGDHDARKPMSENTINK  325
            I GV+HS+RG+KM+T HLVPLS+QA+++LKQ+K + G  DL+F G+HD++KPMSENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRTMGYDTQADICGHGFRTIACSALIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHL  385
            ALR MGYDT+ ++CGHGFRT+ACS+LIESG WS+DAVERQMSH ERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACQHQFIPAYRFEK  414
            +ER  M+QWW+D+LDA +++ I+++ + K
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

174) PC1_0871 in NC_012917


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  404 bits (1519),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 225/389 (58%), Positives = 319/389 (83%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVSLASARKLREEARTILSVGDDPGVKK  85
            + LL+ PNGSK W+L+YR+ GK+K LA+G YP ++LA AR  R+EAR +L+ G DPG KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QHDKQAKKNGNTFEAIARQWVAANIRWSEAHAAKVLRSLELHVFPLIGNVLVTDLKTANL  145
            ++DK  + ++ TF  +A +W ++N +WSE HA +VL+SLE ++F+ +G+  +++LKT +L
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPLRVAEKKGCLETATRIQQRTTVIMRYAVQEGLIASNPANDLCGAITPPPKNHYpalp  205
            L P++  E  G LE A+R+QQRTT IMRYAVQ GLI  NPA+++ GA+++  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  leklpelleRIEGYSGRLLTRLAVQLNLLIFIRSSELRFARWTEIDLDNAMWTLPAQREP  265
            L ++PELL +I++Y+GR LTR A +L LLIFIRSSELRFARW+EID++ ++WT+P++REP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IAGVRHSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNGELLFPGDHDARKPMSENTINK  325
            I+GV+HS+RG+KM+T HLVPLS+QA+++LKQ+K + G  +L+F G+HD++KPMSENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRTMGYDTQVDICGHGFRTIACSALIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHL  385
            ALR MGYDT+V++CGHGFRT+ACS+LIESG WS+DAVERQMSH ERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACQHQFIPAYRFEK  414
            +ER  M+QWW+D+LDA +++ I+++ + K
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

175) Pecwa_0718 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  402 bits (1514),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 226/389 (59%), Positives = 318/389 (82%), Gaps = 0/389 (0%)

Query  26   LYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVSLASARKLREEARTILSAGDDPGVKK  85
            + LL+ PNGSK W+L+YR+ GK+K LA+G YP ++LA AR  R+EAR +L+ G DPG KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QHDKQAKKNGNTFEAIARQWVAANIRWSEAHTDKVLRSLELHVFPLIGNVLVTDLKTANL  145
            ++DK  + ++ TF  +A +W ++N +WSE H+++VL+SLE ++F+ +G+  +++LKT +L
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPLRVAEKKGCLETAARIQQRTTVIMRYAVQEGLIASNPANDLYGAITPPPKNHYpalp  205
            L P++  E  G LE AAR+QQRTT IMRYAVQ GLI  NPA+++ GA+++  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  leklpelleRIEGYSGRLLTRLAVQLNLLIFIRSSELRFARWVEIDLDNAMWTLPAQREP  265
            L ++PELL +I++Y+GR LTR A +L LLIFIRSSELRFARW EID++ ++WT+P++REP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IAGVRHSERGAKMKTPHLVPLSKQAVTVLKQLKLLSGNGDLLFPGDHDALKPMSENTINK  325
            I+GV+HS+RG+KM+T HLVPLS+QA+++LKQ+K + G  DL+F G+HD+ KPMSENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  ALRTMGYDTQVDICGHGFRTIACSALIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHL  385
            ALR MGYDT+V++CGHGFRT+ACS+LIESG WS+DAVERQMSH ERN VRAAYIHKAEHL
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  386  DERTQMMQWWSDYLDACQHQFIPAYRFEK  414
            +ER  M+QWW+D+LDA +++ I+++ + K
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYAK  389

176) Pecwa_0447 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  402 bits (1511),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 244/392 (63%), Positives = 325/392 (83%), Gaps = 3/392 (0%)

Query  26   LYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLISLAKAREKRDEIRLLLLEGIHPTekr  85
            + LLV PNGSK W L+YR+EGK+  +A+G YP I+LA AR +RDE R LL +G++P +K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   eeekeqaqeaLNTFAKVAQDWHRNISQNRWSETHAGRVWRDMERNLLPAIGHRHIADLKT  145
             ++K +   A  TF  VA +W    ++++WSE HA RV + +E NL++A+G+R+IA+LKT
Sbjct  61   KNDKVEQSKA-RTFKEVAIEWY--GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  KDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLSGAIAAPKATHRP  205
            +DLL P+KAVE +G+L++A+RL+QR T IMRYAVQ++LI+ NPAQ+++GA+A+ +  HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  ALKLNKLPDFLARIERHKGrtltrlalkltlCVFIRSSELRFARWPEIDFKRAMWTIPAE  265
            AL L+++P++L++I+   GR LTR A  LTL +FIRSSELRFARW+EIDF  ++WTIP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  REAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEIKAISGAHELIFPGDRRPTKPMSENT  325
            RE+IPGVKHS+RG+KMR+ HLVPLSRQALA+L +IK + GAH+LIF G++ + KPMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  326  VNNALRTMGYDTTIEVCGHGFRTMACSALVESGQWSRDAVERQMSHQERNGVRAAYIHKA  385
            VN+ALR MGYDT +EVCGHGFRTMACS+L+ESG WSRDAVERQMSH ERN+VRAAYIHKA
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  386  EHLDERRLMLQWWADYLDANREEYVVPYEFKR  417
            EHL+ERRLMLQWWAD+LDANRE  + P+E+ +
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFEYAK  389

177) KPHS_05400 in NC_016845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  401 bits (1510),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 229/395 (58%), Positives = 309/395 (79%), Gaps = 2/395 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARTKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFAKSLWRIPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF  S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAIVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NGALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N+ALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLKSNEGKIVTPYEFAKIRKS  420
            HL+ERRLM+QWWAD+L +N  K ++P+E+AKI ++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

178) N559_4601 in NC_022082


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  401 bits (1510),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 229/395 (58%), Positives = 309/395 (79%), Gaps = 2/395 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARTKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFAKSLWRIPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF  S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAIVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NGALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N+ALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLKSNEGKIVTPYEFAKIRKS  420
            HL+ERRLM+QWWAD+L +N  K ++P+E+AKI ++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

179) Y11_15011 in NC_017564


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  400 bits (1506),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 216/386 (56%), Positives = 308/386 (80%), Gaps = 1/386 (0%)

Query  26   LYLLVNPSGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLVQNINPAQQR  85
            + LLV+P+GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLL + ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERTTSSPEKTFKHVALEWHKSNRTWSENHAARLLASMNNHIFPIIGHLPVSELKPRHF  145
              ++   S  +TFK+VA+EW  +N+ WSE+HA R+L S+++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKGIEKKGSLEVAARTRQHMCSIMRHAVHQELIDNNPAANLDGIIAPPVKRHYPALP  205
            +  +K++E  G LEVAAR +Q+  +IMR AV+  LID NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LEQLSELLTRIEDYQQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNKIWTIPATRE  265
            L +++ELLT+I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSHQSITILKQIREISGHQELVFPGDHNPYKPMCENTVN  325
            +IPGV+ S RG+KMRT H+VPLS+Q+++ILKQI+++ G ++L+F G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWSQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK E+CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLNACREAYIPPY  411
            L+ R+ M+QWW+D+L+A RE  I+P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

180) ENC_43890 in NC_021046


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  399 bits (1500),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 225/391 (58%), Positives = 306/391 (79%), Gaps = 2/391 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGEYTFETIGREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S   TF  ++ EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W +P+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKKLLFPGDHDTTKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G   L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHTERNNVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDVNRDLHVTPYDFAN  416
            HL+ERRLM+QWWAD+LD NR+  ++P+++A+
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

181) ETAE_3092 in NC_013508


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  398 bits (1497),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 230/392 (59%), Positives = 308/392 (79%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHDSNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  YLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
             LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLDAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L   R+PE+L+++D+Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLDQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDSCHKHQIAPYEFARI  417
            HL+ERRLM+QWWAD+LD+ +   I+P+E+A+I
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKI  390

182) STY4821 in NC_003198


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  398 bits (1496),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 228/392 (59%), Positives = 307/392 (79%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKT  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W +P+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDIIQYEHITPYEYARV  417
            HL+ERRLM+QWWAD+LD  +   I+P+EYA++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKI  390

183) TY21A_22985 in NC_021176


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  398 bits (1496),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 228/392 (59%), Positives = 307/392 (79%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKT  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W +P+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDIIQYEHITPYEYARV  417
            HL+ERRLM+QWWAD+LD  +   I+P+EYA++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKI  390

184) t4518 in NC_004631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  398 bits (1496),  Expect = 3e-112, Method: Compositional matrix adjust.
 Identities = 228/392 (59%), Positives = 307/392 (79%), Gaps = 2/392 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKT  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W +P+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDIIQYEHITPYEYARV  417
            HL+ERRLM+QWWAD+LD  +   I+P+EYA++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKI  390

185) W5S_0459 in NC_017845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  397 bits (1494),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 242/393 (62%), Positives = 324/393 (83%), Gaps = 3/393 (0%)

Query  26   LYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLVSLAKAREKRDEIRLLLLEGIHPTekr  85
            + LLV PNGSK W L+YR+EGK+  +A+G YP ++LA AR +RDE R LL +G++P +K+
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   eeekeqaqeaLNTFEKVAQDWHRNISQNRWSETHAGRVWRDMERNLLPAIGHRHIADLKT  145
             ++K +   A  TF  VA +W    ++++WSE HA RV + +E NL++A+G+R+IA+LKT
Sbjct  61   KNDKVEQSKA-RTFKEVAIEWY--GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  KDLLEPLKVVEQNGHLDLASRLRQRVTDIMRYAVQNDLIERNPAQDLSGAIAAPKATHRP  205
            +DLL P+K VE +G+L++A+RL+QR T IMRYAVQ++LI+ NPAQ+++GA+A+ +  HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  ALKLNTLPDFLARIERHkgraltrlalkltlCVFIRSSELRFARWPEIDFKRAMWTIPAE  265
            AL L+ +P++L++I+   GR+LTR A  LTL +FIRSSELRFARW+EIDF  ++WTIP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  REAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEIKAISGAHELIFPGDRRPTKPMSENT  325
            RE+IPGVKHS+RG+KMR+ HLVPLSRQALA+L +IK + GAH+LIF G++ + KPMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  326  VNNALRTMGYDTTTEVCGHGFRTMACSALVESGQWSRDAVERQMSHQERNGVRAAYIHKA  385
            VN+ALR MGYDT  EVCGHGFRTMACS+L+ESG WSRDAVERQMSH ERN+VRAAYIHKA
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  386  EHLDERRLMLQWWADYLDANREEYVVPYEFKNV  418
            EHL+ERRLMLQWWAD+LDANRE  + P+E+ ++
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFEYAKI  390

186) SNSL254_A4836 in NC_011080


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  396 bits (1491),  Expect = 8e-112, Method: Compositional matrix adjust.
 Identities = 228/394 (58%), Positives = 308/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAVMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TA+MRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSLQAMALLEQLKQMSGDKELLFPGDHDPTKVMSENTV  325
            E I GV+ S RG KM+  H+VPLS QA+A+L Q+KQ  G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTDVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            NSALR MGYDTK +VCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDEIKIIYITPYDFAKMNN  419
            HL+ERRLM+QWWAD+LD  +   I+P+++AK+NN
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

187) SN31241_8570 in NC_021902


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  395 bits (1486),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 228/394 (58%), Positives = 308/394 (79%), Gaps = 2/394 (0%)

Query  30   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKA  89
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  90   EQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  149
             +K+ + E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  150  HLLAPIKKVDASGKHDVAQRLQQRVTAVMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  209
            +LLAPIK V+ SG+ +VA RLQQR TA+MRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  210  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR  269
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  270  EEIKGVRYSYRGMKMKEEHIVPLSLQAMALLEQLKQMSGDKELLFPGDHDPTKVMSENTV  329
            E I GV+ S RG KM+  H+VPLS QA+A+L Q+KQ  G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  330  NSALRAMGYDTKTDVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  389
            NSALR MGYDTK +VCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  390  HLDERRLMVQWWADYLDEIKIIYITPYDFAKMNN  423
            HL+ERRLM+QWWAD+LD  +   I+P+++AK+NN
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

188) Rahaq_1192 in NC_015061


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  395 bits (1484),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 227/388 (59%), Positives = 300/388 (78%), Gaps = 6/388 (1%)

Query  26   LYLLVHSNGSKYWRFRRTINGKDTTRALGMYPIMTLAEARKARDEFLKSLSQGIDPLH--  83
            + LLVH+NGSKYWR++   +GK+   ALG+YP +TLA+AR  RDE  K L++G+DP +  
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  84   ----AEKEKIASFEEIARQWHARKKTWSSLHSLNVMRAFETHLFPEIGSKAINRLTTQDL  139
                 E+ K  +F E+A +W + +K WS  H+  V++++E +LF+ +G + I  L T+DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  140  LAPLRAIEETGKHELASRLQQRTTSIMRYAVQSGLIKYNPAQELTGAIETHKSQHRPALP  199
            LAP++A+E +G+ E+A+RLQQRTT+IMRYAVQSGLI YNPAQE++GA+ + + QHRPAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  200  LERIPELLQKIDSYSGRNLTKIAVKLNLLIFIRSSELRFSRWTEINKEHRLWEIPANREE  259
            L RIPELL KIDSY+GR LT+ A  L LLIFIRSSELRF+RW+EI+ E  +W IP++RE 
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  260  LEKVRFSYRGSKMKMPHLIPLSNQALVLIEELEALSGDEVLMFPGDHYQHKPMSENTINK  319
            +  V+ S RGSKM+  HL+PLS QAL ++ ++  + G + L+F G+H  HKPMSENT+N 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  320  ALRTMGFDTKTEICGHGFRAMACSALIESGRWSRDAVERQMSHQERNSVRAAYIHKAEHM  379
            ALR MG+DTK E+CGHGFR+MACS+LIESG WSRDAVERQMSH ERNSVRAAYIHKAEH+
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  380  EERRPMLQWWADYLEACRGEFIPPYAFN  407
            EERR MLQWWAD+L+A R   I+P+ + 
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYA  388

189) SEN1970 in NC_011294


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  394 bits (1482),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 239/397 (61%), Positives = 303/397 (77%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLTQGIDPNAKK  85
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA++LL++G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  145
            + ++KV    + K+R+F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+RN++EL 
Sbjct  61   K-NDKV---EQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL P+K  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  H+VPL RQAL ILK+I+Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

190) SPUCDC_0925 in NC_022221


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  394 bits (1483),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 240/397 (61%), Positives = 303/397 (77%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  85
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA++LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  145
            + ++KV    + K+R+F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+RN++EL 
Sbjct  61   K-NDKV---EQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL P+K  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  H+VPL RQAL ILK+I+Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

191) SPUL_0925 in NC_016831


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  394 bits (1483),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 240/397 (61%), Positives = 303/397 (77%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  85
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA++LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  145
            + ++KV    + K+R+F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+RN++EL 
Sbjct  61   K-NDKV---EQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL P+K  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  H+VPL RQAL ILK+I+Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

192) I137_04205 in NC_021984


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  394 bits (1481),  Expect = 5e-111, Method: Compositional matrix adjust.
 Identities = 240/397 (61%), Positives = 303/397 (77%), Gaps = 8/397 (2%)

Query  44   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  103
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA++LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  104  QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  163
            + ++KV    + K+R+F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+RN++EL 
Sbjct  61   K-NDKV---EQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  164  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  223
            T DLL P+K  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  224  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  283
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  284  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  343
            +RE+I  VKHS RG+KM+  H+VPL RQAL ILK+I+Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  344  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  403
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  404  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  440
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

193) ETA_03770 in NC_010694


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  393 bits (1480),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 252/325 (78%), Positives = 288/325 (89%), Gaps = 1/325 (0%)

Query  26   MVLLAHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LL HPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAFKVEQEQEAITFEMVARDWQASNQKWSASHSARVLKSLEDNLFAAIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLFAA+G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELSRIPELLHRIDHYSGRPltrlaleltllVFIRSSELCFARWSEVDFETAMWTIPGERE  265
            EL RIPELL +ID Y+GRPLTR A ELTLL+FIRSSEL FARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PSEGVKHSQRGSKMRTPHLVPLSRQALGILEKIKSMSGNRELIFVGDHDPRKPMSENTVN  325
            P  GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G ++LIF+G+HD++KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKVEVCGHGFRTMACS  350
             ALRVMGYDTKVEVCGHGFRTMACS
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACS  324

194) SG1996 in NC_011274


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  393 bits (1479),  Expect = 8e-111, Method: Compositional matrix adjust.
 Identities = 239/397 (61%), Positives = 303/397 (77%), Gaps = 8/397 (2%)

Query  48   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  107
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA++LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  108  QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  167
            + ++KV    + K+R+F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+RN++EL 
Sbjct  61   K-NDKV---EQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  168  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  227
            T DLL P+K  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  228  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  287
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  288  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKELRQLTYEEGNEAELIFTGCYDSFKP  347
            +RE+I  VKHS RG+KM+  H+VPL RQAL ILK+++Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  348  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  407
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  408  YTHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  444
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

195) SeAg_B2068 in NC_011149


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  393 bits (1478),  Expect = 8e-111, Method: Compositional matrix adjust.
 Identities = 237/397 (60%), Positives = 303/397 (77%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKKLLAQGIDPNAKK  85
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA+KLLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADEKALQEKRDKTRSFRVVARSWFATKTKWSEDYADTVWKRLETYVFPDIGDSNVSDLD  145
            + D    +  + K+R+F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+ N+++L 
Sbjct  61   KND----KVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL P+K  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCQQAITILKEIRQLTYEEGNDAGLIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  H+VPL +QA++ILK+I+Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLDQRRLMLQWWADFLDANRDEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLDANR+  + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

196) SeD_A2305 in NC_011205


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  393 bits (1478),  Expect = 9e-111, Method: Compositional matrix adjust.
 Identities = 240/397 (61%), Positives = 303/397 (77%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKRLLAQGIDPNAKK  85
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA++LLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADEKVLQEKRDKTRSFRVVAKSWFATKTKWSEDYADTVWKRLETYVFPDIGDRNVSELD  145
            + ++KV    + K+R+F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+RN++EL 
Sbjct  61   K-NDKV---EQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL P+K  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRFARWSEIDFKSKLWVIPE  265
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELRFARWSEIDF + +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QREAIENVKHSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAELIFTGCYDSFKP  325
            +RE+I  VKHS RG+KM+  H+VPL RQAL ILK+I+Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YPHKAKHLDQRRLMLQWWADFLDENRYEMVRPFEFAQ  422
            Y HKA HL++RRLMLQWWADFLD NR   + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

197) intA_4 in NC_022370


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  393 bits (1478),  Expect = 9e-111, Method: Compositional matrix adjust.
 Identities = 225/391 (58%), Positives = 305/391 (79%), Gaps = 2/391 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKT  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKQAHAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRLLKTS  145
             +K+   E+S A TF  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I  LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKVRHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRLPEFLSRLAAYRGRVMTRIAVELSLLTFVRSSELRFARWNEFDFDKALWRVPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW+E+DF+ ++W +P+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVPLSRQAMNLLGQLKQISGDRKLLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+VPLSRQA+ +L Q+KQ+ G + L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N+ALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMMQWWADYIDHNKIMYTTPFDFAK  416
            HL+ERRLM+QWWAD++D N+    +PF++AK
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

198) W5S_1679 in NC_017845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  392 bits (1474),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 222/397 (56%), Positives = 304/397 (77%), Gaps = 8/397 (2%)

Query  26   MHLLIHPNGSKYWRLSYRFAQKQKLLALGVYPAISLTDARERRDEARKLIANGIDPGARK  85
            MHLL+HPNGSKYWRL YR+  KQK+LALGVYP I+L+DAR RRDEARKL+ANG+DPG +K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KSGREQQGTHDESRSFAVMARAWAETKTKWSEDYKVKVWRRIENYLLPDLGNRDVSELDT  145
            K+++ +Q+    +R+F  +A  W  T+ KWSED   +V + +E+ L++ LG+R+++EL T
Sbjct  61   KNDKVEQSK---ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  SDLLIPLRKVEKLGYLDIAMRLKQYTTSIMRYAVQQKIISYNPAYDLQGTIEKGETAHRP  205
             DLL P++ VE  G L++A RL+Q TT+IMRYAVQ  +I YNPA ++ G++   +  HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  SIEIYEIPDLLQKLDNYRGRGlltelairltllVFVRSSELRFARWSEIDFKKSLWVIPE  265
            ++E+  IP+LL K+D+Y GR L    +    L +F+RSSELRFARWSEIDF  S+W IP 
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLL-IFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  QRKEVKGVKHSGRGAKMKRKHFVPLCRQAVEILKEVKQITYGEKAGDGFIFTGFYDSDSA  325
            +R  + GVKHS RG+KM+  H+VPL RQA+ ILK++KQ+     +++++IF G  DS+ +
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  326  MSSGTINKALQRMGYDTKTDLCGHGFRTLACSALTESGLWSEDTVELQMSHKEKNTVRSA  385
            MS  T+N AL+ MGYDTK ++CGHGFRT+ACS+L ESGLWS D+VE QMSH E+N+VR+A
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKVSHLDQRKLMLQWWADFLDANRNGVVSPFEFAQ  422
            Y HK  HL++R+LMLQWWADFLDANR+  +SPFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

199) Dd586_2635 in NC_013592


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  390 bits (1467),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 214/394 (55%), Positives = 309/394 (79%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINKKESRLGLGAYPDVSLADARQQRDGIRKLLVQNINPAQQR  85
            + LLV+P GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLL + ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERATALPEETFKSVALSWHKSNKAWSENHAVRLLASMNNHIFPIIGHLPVSELKPRHF  145
              ++       TFK VA+ W  +NK WSE+HA R+L S+++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgiekkglleVAARSRQHMCNIMRHAVHQELIDNNPAANLDGIIAPPVKRHYPALP  205
            +  +K++E  G LEVAAR +Q+   IMR AV+  LID NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LERLSELLTRIGDYKQGRELTRLAVSLTLHLFIRSSELRFAHWSEIDFKNNIWTIPANRE  265
            L R++ELLT+I+ Y  GR LTR A  LTL +FIRSSELRFA+WSEIDF  +IWTIP++RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSSQSITILKQIREISGHQELVFPGDHNPYKPMCENTIN  325
            +IPGV+ S RG+KMRT H+VPLS Q+++ILKQI+++ G ++L+F G+H++ KPM ENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKSDICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDTNREEYVAPYIYAQQHET  419
            L+ R+ M+QWW+D+LD+NRE  ++P+ YA+ ++ 
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

200) PAU_03981 in NC_012962


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  388 bits (1460),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 225/394 (58%), Positives = 312/394 (80%), Gaps = 2/394 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPTDKKEDRLAFGVYPVISLadarakrdeakkLIASGVDPKA  85
            + L + P GSKYWR++YR   + K+  LA+GVYP I+LADAR +RDEA+KL+A+GVDP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   TQKEAQAEVSGEFNFETIARKWHASNKRWGDYNRARVLRSLEQYIFPHIGKVDVRQLKTS  145
             +K+ + E S    F  +A  W ++NK+W++ +  RVL+SLE+ +F+ +G  ++ +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIRVVDDAGKHDVAQRLQQRVTAIMRYAVQNDIIDSNPAIDMAGALTMPKTKHYPA  205
            +LLAPI+ V+ +G+ +VA RLQQR TAIMRYAVQ+++ID NPA +MAGA++  + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSNCFPELLERINRYCGRKITRLAVVLTLLTFVRSSELRFARWDEIDFDISVWQIPGQR  265
            L  + +PELL +I+ Y GR +TR A  LTLL F+RSSELRFARW EIDF+ S+W IP +R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  NPIEGVRYSYRGMKMKSAHIVPLSNQAIDVLQQLKELSGDNELLFPGDHDPNKVMSENTV  325
            +PI GV+ S RG KM+++H+VPLS QA+ +L+Q+K++ G ++L+F G+HD++K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRVMGYDTKTEVCGHGFRAMACSALVESGLWSKDAVERQMSHTERNGVRAAYIHTSE  385
            N+ALRVMGYDTK EVCGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLEERRLMIQWWADYLDQCKKEFIAPYVFSNKNS  419
            HLEERRLM+QWWAD+LD  +   I+P+ +++ N+
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

201) Dd586_1478 in NC_013592


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  388 bits (1460),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 217/392 (56%), Positives = 310/392 (80%), Gaps = 1/392 (0%)

Query  26   LYLLINPGGSRLWYLKYRINRKESRLGLGTYPDVSLADARQQRDSIRKLLAQNINPAHQQ  85
            + LL++P GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAEKAPRSPEKSFRDVALDWHKSNRTWSESHATRLLASMNNHLFPVIGHLPVTELKPRHF  145
              +K  +S  ++F++VA++W  +N+ WSE HA R+L S++++LF+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  ISLLRGIEKKGLLEVAARTRQHLCNIMRHAVHQELIEHNPAANLDGIIASPVKRHYPAlp  205
            ++ ++++E  G LEVAAR +Q+   IMR AV+  LI+ NPA ++ G +AS  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  leqlpellTRIEDYRQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNHIWTIPATRK  265
            L ++PELLT+I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ R 
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSRQAIAILRQIQEISGHQVLIFPGAHNPYKPMCENTVN  325
            +IPGV+ S RG+KMRT H+VPLSRQA+AIL+QI+++ G + LIF G H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESSLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK E+CGHGFR+MACS+L+ES+LW++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMNRENYVAPYVYAQVT  417
            L+ R+ M+QWW+D+LD NRE+ ++P+ YA++ 
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKIN  391

202) E2348C_2119 in NC_011601


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  388 bits (1459),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 236/397 (60%), Positives = 301/397 (76%), Gaps = 8/397 (2%)

Query  26   LYLLLHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKKLLAQGIDPNAKK  85
            + LL+HPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA+KLLA+G+DP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QADEKALQEKRDKTRSFRVVARSWFATKTKWSEDYADTVWKRLETYVFPDIGDSNVSDLD  145
            + D    +  + K+R+F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+ N+++L 
Sbjct  61   KND----KVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPVKKAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL P+K  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRYARWSEIDFNSKLWVIPE  265
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELR+ARWSEIDF++ +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  KREVIERVKYSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNDAGLIFTGCYDSFKP  325
             RE I  VK S RG+KM+  H+VPL RQAL ILK+I+Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSKDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS+DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLEQRRLMLQWWADYLDANRDGMVRPFEFAQ  422
            Y HKA HLE+RRLMLQWWAD+LDANR+  + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

203) ECO111_2624 in NC_013364


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  385 bits (1447),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 238/397 (60%), Positives = 300/397 (76%), Gaps = 8/397 (2%)

Query  26   LYLLVHPNGSKYWQLGYRFDGKQKVFSIGVYPAVSLADARQRRDEAKKLLAQGVDPNAKK  85
            + LLVHPNGSKYW+L YR++GKQK++++GVYP ++LADAR RRDEA+KLLA+GVDP  KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   LADEKALQEKRDKTCSFRVVARSWFATKTKWSEDYADTVWKRLETYVFPDIGDSNVSDLD  145
              D   +++ + +T  F+ VA  W++T+ KWSED A+ V K LE  +F+ +G+ N+++L 
Sbjct  61   KNDK--VEQSKART--FKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TGDLLVPIKNAETLGYLEIAMRIKQYITAILRHAVQQKLMRHNPAYDMEGAVQKPETEHR  205
            T DLL PIK  E  G LE+A R++Q  TAI+R AVQ  L+  NPA +M GAV   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PAleleeipllleRIDAYKGRGLTTLAIKLNLLIFIRSSELRYARWSEIDFNSKLWVIPE  265
            PALEL  IP LL +ID+Y GR LT  A  L LLIFIRSSELR+ARWSEIDF++ +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  KREAIERVKYSTRGAKMKRQHFVPLCRQALKILKEIRQLTYEEGNEAGLIFTGCYDSFKP  325
             RE+I  VK S RG+KM+  H+VPL RQAL ILK+I+Q+        +LIF G  DS KP
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHKP  292

Query  326  MSENTINKALRKMGYDTTQDICGHGFRTLACSALIESGLWSEDAVELQMSHKESNSVRAA  385
            MSENT+N ALR MGYDT  ++CGHGFRT+ACS+LIESGLWS DAVE QMSH E NSVRAA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  386  YTHKAKHLEQRRLMLQWWADYLDANRDGMVRPFEFAQ  422
            Y HKA HLE+RRLMLQWWAD+LDANR+  + PFE+A+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

204) Pecwa_1727 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  384 bits (1443),  Expect = 5e-108, Method: Compositional matrix adjust.
 Identities = 225/398 (57%), Positives = 300/398 (76%), Gaps = 9/398 (2%)

Query  26   MHLLVHPNGSKYWRLSYRFAQKQKLLALGVYPAISLTDARERRDEARKLIANGIDPGAKK  85
            MHLLVHPNGSKYWRL YR+  KQK+LALGVYP I+L+DAR RRDEARKL+ANG+DPG KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KASIREQPGAQDESRSFAVMARAWAETKTKCSEDYKVKVWRRIENYLLPDLGKRDVSELD  145
            K    ++   Q  +R+F  +A  W  T+ K SED   +V + +E+ L++ LG R+++EL 
Sbjct  61   K----NDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  146  TSDLLTPLRKVEKLGYLDIAMRLKQYTTSIMRYAVQQKIISYNPAYDLAGTVEKGETAHR  205
            T DLL+P++ VE  G L++A RL+Q TT+IMRYAVQ  +I YNPA ++AG+V   +  HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  206  PSIEIYEIPDLLQKIDDYHGRGlltelairltllVFVRSSELRFARWNEIDFKKSLWVIP  265
            P++E+  IP+LL KID Y GR L    +    L +F+RSSELRFARW+EIDF  S+W IP
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLL-IFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  EQRKEVKGVKYSGRGAKMKRKHFVPLSRQAVEILKEVKQITYGEKAGDGFIFTGFYDSDS  325
             +R  + GVK S RG+KM+  H+VPLSRQA+ ILK++KQ+     +++++IF G  DS+ 
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC----GAHDLIFIGNHDSHK  291

Query  326  AMSSGTINKALQRMGYDTKTDLCGHGFRTLACSALTESGLWSEDTVELQMSHKEKNTVRS  385
            +MS  T+N AL+ MGYDTK ++CGHGFRT+ACS+L ESGLWS D+VE QMSH E+N+VR+
Sbjct  292  PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  386  AYTHKVSHLDQRKLMLQWWADFLDANRNGVVSPFEFAQ  423
            AY HK  HL++R+LMLQWWADFLDANR+  +SPFE+A+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

205) CFSAN002050_16945 in NC_021818


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  384 bits (1442),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 222/394 (57%), Positives = 306/394 (78%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRLWYLKYRFNRKESRIALGAYPQVSLSDARQQRDGIRKLLAQNINPAQQR  85
            + LLV+P GS+ W L+YR++ K+  +ALG YP+++L+DAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   MTEKAAASPEKCFEAVAVAWHKTNKKWSADYAERILASMKNHIFPAIGHLPVTMLKTQHF  145
              +K   S  + F  VA+ W  TNKKWS D A+R+L S+ +++F+A+G+  ++ LKT+++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  TALLKVIEDKGFLEVASRTRQQLCNIMRYAVQQGLTESNPAQHLEGVTAPPVKNHYPAlp  205
             A +K +E  G LEVA+R +Q+   IMRYAVQ GL + NPAQ++ G  A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpelferIGDYQQGRQLTRLAVVLTLHLFIRSSELRFARWSEIDFRNKIWTIPATRE  265
            L R+PEL+ +I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  TIEKVRFSGRGAKMRTPHIVPLSRQAIAILKQIKEISGHLELVFPGDHNPYKPMSENTIN  325
             I  V+ S RG+KMRT H+VPLSRQA+AILKQIK++ G  +L+F G+H++ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  RALRLMGYDTKTDVCGHGFRTMACSALVESELWSRDAVERQMSHQERNSVRAAYIHRAEH  385
             ALR+MGYDTK +VCGHGFRTMACS+L+ES LWSRDAVERQMSH ERNSVRAAYIH+AEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKDMMQWWSDYLDVSREGYVAPYIYARRHKA  419
            L+ R+ M+QWW+D+LD +RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

206) Dda3937_00080 in NC_014500


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  383 bits (1441),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 215/390 (56%), Positives = 307/390 (79%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGTYPDVSLADARQQRDGIRKLLAQNINPAHQR  85
            + LLV+P GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAEKASRSPEKSFRDVALDWHKSNRTWSENHATRLLASMNNYLFPVIGHLPVTELKPRHF  145
              +K  +S  ++F++VA++W  +N+ WSE+HA R+L S+++ LF+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLRGIEKKGLLEVASRTRQHLCNIMRHAVHQELIEHNPAANLDGIIATPVKRHYPAlp  205
            +  ++++E  G LEVA+R +Q+   IMR AV+  LI+ NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  leqlpellTRIEDYRQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNNIWTIPATRK  265
            L ++PELLT+I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF  +IWTIP+ R 
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSRQTIAILRQIQEISRHQVLIFPGAHNPYKPMCENTVN  325
            +IPGV+ S RG+KMRT H+VPLSRQ++AIL+QI+++   + LIF G H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWSQDAVERQMSHQERNSVRAAYIHKAQY  385
             ALR+MGYDTK E+CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERNSVRAAYIHKA+ 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMNREGYVAPYVYAR  415
            L+ R+ M+QWW+D+LD NRE  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

207) A79E_1748 in NC_018522


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  383 bits (1441),  Expect = 7e-108, Method: Compositional matrix adjust.
 Identities = 216/393 (55%), Positives = 310/393 (79%), Gaps = 1/393 (0%)

Query  26   LYLLVKPGGSHLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS  W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMPEKMFKTVALAWHSSNKKWSQNTADRLLASLNNHIFPVIGHLSVSELKPRHF  145
              ++  +   + FK VA+ W ++NKKWS++ A+R+L SL++++F+ +G+ +++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKGIEVKGLLEVASRTRQHLSNIMRYAVHQGLIDSNPAANLDGVTTPPVRHHYPAlq  205
            +  +K++E+ G LEVA+R +Q+ + IMRYAV+ GLID NPA ++ G  ++  R+H PAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDGYHQGRELTRLAVLLTLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +ID+Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSGRGAKMRTAHIVPLSEQAIAILKQIKEISGVYELVFPGDHNPYKPMCENTVN  325
            +I+GV+ S RG+KMRT+H+VPLS QA+AILKQIK++ G  +L+F G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYNTKQDICGHGFRTMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR+MGY+TK ++CGHGFRTMACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDVCRKTYVPPYIQGQINQ  418
            LE R+ M+QWW+D+LD  R   ++P+  ++IN+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINN  392

208) intB in NC_014228


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  381 bits (1431),  Expect = 5e-107, Method: Compositional matrix adjust.
 Identities = 215/391 (55%), Positives = 315/391 (81%), Gaps = 2/391 (0%)

Query  26   LYLEITSRGSKYWRMKYRRPTDKKEDRLAFGVYPVVSLadarakrdeakkLIAQGSDPKA  85
            + L + + GSKYWR++YR   + K+  LA+GVYP ++LADAR +RDEA+KL+A+G DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EKKGAQTESKGAPSFEQVAREWHASNKRWSEDHSNRILRSLEHYIFPHIGRLDISTLRTS  145
             KK  + E   A +F +VA EW ++NK+WSEDH++R+L+SLE+ +F+ +G  +I+ L+T 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  QLLAPIKSVDADGKHDIAQRLQQRVTSIMRYAVQNDILESNPANDMSGALSTVKAKHHPA  205
            +LLAPIK+V+  G+ ++A RLQQR T+IMRYAVQ+++++ NPA++M+GA+++ + +H+PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPHERLPEFLTRLSHYRGRLITQIAVELTLLTFVRSSELRFARWEELDLENAVWKIPATR  265
            L   R+PE+LT++  Y GR +T+ A ELTLL F+RSSELRFARW E+D+E ++W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  KPIEGVKFSERGMKMKTEHIVPLSRQAVSLFKILQGLSGECEVMFPHDHNPAKVMSESTV  325
             PI GVK S+RG KM+T H+VPLSRQA++++K ++ + G  +++F  +H++ K MSE+TV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRGMGYDTKTEVCGHGFRTMARGAMGESGLWNDDAIERQLSHVERKNVRAAYIHTSK  385
            N+ALR MGYDTK EVCGHGFRTMA +++ ESGLW+ DA+ERQ+SH+ER++VRAAYIH + 
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERQLMVQWWADYLDANREKYITPYDFAK  416
            HL+ER+LM+QWWAD+LDANREK I+P+++AK
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

209) SPAB_01138 in NC_010102


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  380 bits (1427),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 218/394 (56%), Positives = 306/394 (78%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRLWYLKYRFNRKESRIALGAYPQVSLSDARQQRDGIRKLLAQNINPAQQR  85
            + LLV+P GS+ W L+YR++ K+  +ALG YP+++L+DAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   MTEKAAASPEKCFEAVAVAWHKTNKKWSADYAERILASMKNHIFPAIGHMPVTMLKTQHF  145
              +K   S  + F  VA+ W  TNKKWS D A+R+L S+ +++F+A+G+  ++ LKT+++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  TALLKVIEDKGFLEVASRTRQQLCNIMRYAVQQGLTENNPAQHLEGVTAPPVKNHYPAlp  205
             A +K +E  G LEVA+R +Q+   IMRYAVQ GL + NPAQ++ G  A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpelferIGDYQQGRQLTRLAVVLTLHLFIRSSELRFARWSEIDFRHKIWTIPATRE  265
            L R+PEL+ +I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  TIEKVRFSGRGAKMRTPHIVPLSWQSIAILKQIQEISGHLELVFPGDHNPYKPMSENTIN  325
             I  V+ S RG+KMRT H+VPLS+Q++AILKQI+++ G  +L+F G+H++ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  RALRLMGYDTKADVCGHGFRAMACSALVESELWSRDAVERQMSHQERNSVRAAYIHRAEH  385
             ALR+MGYDTK +VCGHGFR+MACS+L+ES LWSRDAVERQMSH ERNSVRAAYIH+AEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDVSREGYVAPYIYARRHKA  419
            L+ R+ M+QWW+D+LD +RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

210) SBO_4174 in NC_007613


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  380 bits (1430),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 229/395 (58%), Positives = 314/395 (80%), Gaps = 2/395 (0%)

Query  26   LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTlaqarakrdqakkllaqGIDPKA  85
            + L V ++GSKYWR++YR   + K+  LA+GV P +TLA+AR +RD+A+KLLA+G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQAENSGAYSFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS  145
             +K+ + E+S A +F  +A EW ++NK+WSEDH  RVL+ LE  +F+ +G  +I +LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA  205
            +LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKR  265
            L   R+PE+L+++ +Y GR +TR A EL+LL F+RSSELRFARW E+DF+ S+W +P+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EEIKGVRYSYRGMKMKEEHIVQLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTV  325
            E I GV+ S RG KM+  H+V LSRQA+ +L+Q+KQ+ G  +L+F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNNVRAAYIHTSE  385
            NSALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLQANKGKTITPYDFAKINKS  420
            HL+ERRLM+QWWAD+L+AN+ K I+P+++AKIN++
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

211) intB in NC_013892


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  380 bits (1430),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 212/392 (55%), Positives = 313/392 (80%), Gaps = 5/392 (1%)

Query  26   LYLEVSSRGSKYWRMKY-YRPTDKKEDRLAFGVYPTVSLadarakrdeakkLMAQGIDPK  84
            + L V + GSKYWR++Y Y   + K+  LA+GVYP ++LADAR +RDEA+KL+A+G+DP 
Sbjct  1    MHLLVHPNGSKYWRLQYRY---EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG  57

Query  85   AEKKGTPT-PAKVNSFEQVARAWHASNKRWSDSHRQKILRSLEQYIFPHIGARDITTLRT  143
              KK      +K  +F +VA  W ++NK+WS+ H +++L+SLE+ +F+ +G R+I+ L+T
Sbjct  58   DKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  144  SQLLAPVKAIDEQDKHDIAQRLRQRITAIMRYAVQNDILESNPANDMTGALTTAKSRHHP  203
             +LLAP+KA++  ++ ++A RL+QR TAIMRYAVQ+++++ NPA++M+GA+++ + +H+P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  204  ALPHECLPDFLNRLSAYRGRLLTKIAVELALLTFVRSSELRFARWQEIDLENSVWKIPAT  263
            AL    +P++L ++ +Y GR LT+ A EL+LL F+RSSELRFARW EID+E S+W IP+ 
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  264  RQPIKGVRFSERGMKMKTDHIVPLSRQAVGLINALHELSGNCDVMFPSDHNSAKVMSENT  323
            R+PI GV+ S+RG KM+T H+VPLSRQA+++++ + ++ G  D++F ++H+S K MSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  324  VNKALRAMGYDTQTEVCGHGFRTMARGAMGESGLWSDDAIERQLSHIERNNVRAAYIHTS  383
            VN ALR MGYDT+ EVCGHGFRTMA +++ ESGLWS DA+ERQ+SH+ERN+VRAAYIH +
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  384  KHLDERRLMVQWWADYLDANREKPITPYDFAK  415
             HL+ERRLM+QWWAD+LDANREK I+P+++AK
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFEYAK  389

212) intB in NC_014228


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  380 bits (1428),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 215/391 (55%), Positives = 314/391 (81%), Gaps = 2/391 (0%)

Query  26   LYLEITSRGSKYWRMKYRRPTDKKEDRLAFGVYPVVSLadarakrdeakkLIAQGADPKA  85
            + L + + GSKYWR++YR   + K+  LA+GVYP ++LADAR +RDEA+KL+A+G DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EKKGAQAESKGAPSFEQVAREWHASNKRWSEDHSNRILRSLEHYIFPHIGKLDISTLRTS  145
             KK  + E   A +F +VA EW ++NK+WSEDH++R+L+SLE+ +F+ +G  +I+ L+T 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  QLLAPIKSVDADGKHDIAQRLQQRVTSIMRYAVQNDILESNPANDMSGALSTVKAKHHPA  205
            +LLAPIK+V+  G+ ++A RLQQR T+IMRYAVQ+++++ NPA++M+GA+++ + +H+PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPHERLPEFLTHLSHYRGRLITQIAVELTLLTFVRSSELRFARWEELDLENAVWKIPATR  265
            L   R+PE+LT +  Y GR +T+ A ELTLL F+RSSELRFARW E+D+E ++W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  KPIEGVKCSERGMKMKTGHIVPLSRQAVSLFKTLQDLSGECEVMFPHNHNLAKVMSESTV  325
             PI GVK S+RG KM+T H+VPLSRQA++++K ++++ G  +++F  NH+  K MSE+TV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRGMGYDTKTDVCGHGFRTMARGAMGESGLWNDDAIERQLSHVERKNVRAAYIHTSK  385
            N+ALR MGYDTK +VCGHGFRTMA +++ ESGLW+ DA+ERQ+SH+ER++VRAAYIH + 
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERQLMVQWWADYLDANREKYITPYDFAK  416
            HL+ER+LM+QWWAD+LDANREK I+P+++AK
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

213) Dd1591_1514 in NC_012912


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  380 bits (1427),  Expect = 9e-107, Method: Compositional matrix adjust.
 Identities = 220/390 (57%), Positives = 312/390 (80%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            + LLV+P GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAEKAPRSPEKSFRDVALDWHKSNRTWSESHATRLLASMNNHLFPVIGHLPVTELKARHF  145
              +K  +S  ++F++VA++W  +N+ WSE HA R+L S++++LF+ +G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgiekkglleVAARTRQHLCNIMRYAVHQELIEHNPAANLDGIIAPPVKRHYpalp  205
            +  +K++E  G LEVAAR +Q+   IMRYAV+  LI+ NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  leklpellaRIEDYKQGRELTRMAVSLTLHLFIRSSELRFARWSEIDFRNHIWTIPATRE  265
            L ++PELL++I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSRQSITILKQIREISGHQELIFPGDHNPYKPMCENTVN  325
            +IPGV+ S RG+KMRT H+VPLSRQ+++ILKQI+++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWSQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK E+CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARQAMMQWWSDYLDMNRESYVAPYVYAQ  415
            L+ R+ M+QWW+D+LD NRE  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

214) SeAg_B4773 in NC_011149


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  380 bits (1427),  Expect = 9e-107, Method: Compositional matrix adjust.
 Identities = 220/394 (56%), Positives = 310/394 (79%), Gaps = 2/394 (0%)

Query  26   LYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVYPTITlaearakrdaakkllSQGIDPKV  85
            + L V P+GSKYWR++YR   + K+  LA+GVYP ITLA+AR +RD A+KLL++G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKGAQAEIEGAYLFETIARQWHASNLTWSEDHSHRVLLTLEQYIFPSIGQIDARTLRTS  145
             +K  + E   A  F  +A +W ++N  WSEDH+HRVL +LE+ +F+++G+ +   L+T 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  QLLNPIKAVDTAGKHDVAQRLMQRVNAIMRFGVQNDLLESNPASDMAGALLSVKATHHPA  205
            +LL PIKAV+ +G+ +VA RL QR  AIMR++VQ++L++ NPA +MAGA+ S +  H+PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPPKRIPEFLERLSRYKGRLMTRLAVELTLLTFIRSSEMRFARWSEVNFERSEWTIPGIR  265
            L  KRIPE+L ++  Y GR +TR A ELTLL FIRSSE+RFARWSE++FE S WTIP  R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  KPIPGVKHSERGMKMKTEHIVPLSKQAFDIFKRLHALSGKGEVIFPSDHDPKKVMSENTV  325
             PIPGVKHS+RG KM+T H+VPLS+QA+ I+K++  + G  ++IF ++HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NSALRVMGYDTKTEVCGHGFRTMARGALSESKLWNDDAIERQLSHVERKNVKGSYMHTSE  385
            NSALRVMGYDTK EVCGHGFRTMA ++L ES LW+ DA+ERQ+SH+ER++V+++Y+H +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  YLEERRLMLQWWADYIDANKNGSITPYDFARVHG  419
             LEERRLMLQWWAD++DAN++ +I+P+++A+++ 
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

215) SBO_1221 in NC_007613


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  379 bits (1425),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 218/394 (56%), Positives = 305/394 (78%), Gaps = 1/394 (0%)

Query  26   LYLLVNQGGSRIWYLKYRFSGKESRVSLGAYPLVSLAEARQRRDDIRKLLTQNINPAHQR  85
            + LLV+  GS+ W L+YR+ GK+  ++LG YP ++LA+AR RRD+ RKLL++ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   MSDKAAASPEKYFKAVALAWHKTNKKWSPDYAARILASMENHIFPAIGHLPVTTLKTQNF  145
             +DK   S  + FK VA+ W  TNKKWS D A R+L S+E+++F+A+G+  ++ LKT+++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  TALLRVIEDKGFLEVASRTRQQLCNIMRYAVQQGFTENNLAQHLEGVTAPPVKNHYPAlp  205
             A ++ +E  G LEVA+R +Q+   IMRYAVQ G+ + N AQ++ G  A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpelferIGDYQQGRQLTRLAVVLTLHLFIRSSELRFARWGEIDFRNKIWTIPATRE  265
            L R+PEL+ +I+ Y  GR LTR A  LTL +FIRSSELRFARW+EIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIEKVRFSGRGAKMRTPYIVPLSRQAIAILKQIKEISGHLELVFPGDHNPYKPMSENTVN  325
            +I  V+ S RG+KMRT  +VPLSRQA+AILKQIK++ G  +L+F G+H++ KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  RALRLMGYDTKTDVCGHGFRTMACSALVETELWSRDTVERQMSHQERNSVRAAYIHRAEH  385
             ALR+MGYDTK +VCGHGFRTMACS+L+E+ LWSRD+VERQMSH ERNSVRAAYIH+AEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARTAMMQWWSDYLDVSREGYVAPYIYARRHKA  419
            L+ R  M+QWW+D+LD +RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

216) int in NC_011745


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  377 bits (1417),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 303/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K +E  G LEVA+R +Q+ + IMR AV+ GLID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMSHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR +H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

217) SbBS512_E0979 in NC_010658


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  376 bits (1413),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 224/394 (57%), Positives = 307/394 (78%), Gaps = 1/394 (0%)

Query  26   LYLLVNPGGSRIWYLKYRFNGKESRVSLGAYPLVSLAEARQQRDGIRKLLAQNINPAQQR  85
            + LLV+P GS+ W L+YR++GK+  ++LG YP ++LA+AR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   MAEKSACSPEKCFKAVALAWHKTNKKWSADYAARILASMENHIFPAVGHLPVAALKTQDF  145
              +K   S  + FK VA+ W  TNKKWS D A R+L S+E+++F+A+G+  +A LKT+D+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  TALLRVIENKGFLEVASRTRQQLSNIMRYAVQQGLTDSNPAQHLEGVTASPVKNHYPAlp  205
             A ++ +E  G LEVA+R +Q+ + IMRYAVQ GL D NPAQ++ G  AS  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpelldrIGDYRQGRELTRLAVVLTLHLFIRSSELRFARWSEIDFRHKIWTIPATRE  265
            L R+PELL +I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIDKVRFSGRGAKIRTPHIVPLSCQAIAILKQIQELSGHLDLVFPGDHNPYKPMSENTTN  325
            +I  V+ S RG+K+RT H+VPLS QA+AILKQI+++ G  DL+F G+H++ KPMSENT N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  RALRLMGYDTKTEICGHGLRAMACSALVESDLWSRDTVERQMSHQERNSVRAAYVHKAEH  385
             ALR+MGYDTK E+CGHG+R+MACS+L+ES+LWSRD+VERQMSH ERNSVRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDVCREGYVAPYIYARQHEA  419
            LE R+ M+QWW+D+LD  RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

218) KOX_24355 in NC_016612


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  375 bits (1410),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 304/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAHNINPAQQR  85
            + LLV+P GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERSTSSPDKTFKYVALDWHKSNRTWSENHASRLLASMNNHIFPVIGHLPVAELKPRHF  145
              ++   S  +TFK VA++W  +N+ WSE+HA R+L S+++++F+ +G+  +AELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKGIEQKGLLEVAARTRQHMCNIMRHAIHQELIENNPAANLEGIISPPVKRHYPALQ  205
            +  +K++E  G LEVAAR +Q+   IMR A++  LI+ NPA ++ G +++  ++H PAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LERLPELLARIEDYKQGREltrlavlltlhlFIRSSELRFARWSEIDFKNRIWTIPATRE  265
            L R+PELL++I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AISGVRYSGRGAKMRTPHIVPLSRQSIAILKQIREISGHRVLIFPGDHNPYKPMCENTVN  325
            +I+GV+ S RG+KMRT H+VPLSRQ++AILKQI+++ G + LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMRYDTKNEICGHGLRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+M YDTK E+CGHG+R+MACS+L+ESGLW++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDSRKAMMQWWSDYLDMCRKAYAPPYICGK  415
            L+ R+ M+QWW+D+LD  R    +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

219) ROD_20671 in NC_013716


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  375 bits (1408),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 220/394 (56%), Positives = 305/394 (78%), Gaps = 1/394 (0%)

Query  26   LYLLVKPGGSRIWYLKYRFNGKESRVSLGAYPLVSLAEARLQRDGIRKLLAQNISPAQQR  85
            + LLV P GS+ W L+YR++GK+  ++LG YP ++LA+AR++RD  RKLLA+ + P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   VaakaaaSPEKCFEAVALAWHKTNKKWSADYAERILASMKNHIFPAIGHMPVTLLKTQHF  145
               K   S  + F  VA+ W  TNKKWS D A+R+L S+ +++F+A+G+  ++ LKT+++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  TALLKVIEDKGFLEVASRTRQQLCNIMRYAVQQGFIENNPAQHLEGVTAPPVKNHYPAlp  205
             A +K +E  G LEVA+R +Q+   IMRYAVQ G+I+ NPAQ++ G  A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGDYQQGRQLTRLAVVLTLHLFIRSSELRFARWSEIDFRNKIWTIPATRE  265
            L R+PELL +I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  TIEKVRFSGRGAKMHTPHIVPLSRQAIAILKQINEISGHLELVFPGDHNPYKPMSENTIN  325
             I  V+ S RG+KM+T H+VPLSRQA+AILKQI+++ G  +L+F G+H++ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  RALRLMGYDTKTDVCGHGFRAMACSALVESELWSRDAVERQMSHQERNSVRAAYIHRAEH  385
             ALR+MGYDTK +VCGHGFR+MACS+L+ES LWSRDAVERQMSH ERNSVRAAYIH+AEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKDMMQWWSDYLDVSREGYVAPYIYARRHKA  419
            L+ R+ M+QWW+D+LD +RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

220) CKO_00953 in NC_009792


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  375 bits (1408),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 210/386 (55%), Positives = 299/386 (78%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L S+++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K +E  G LEVA+R +Q+ + IMR AV+ GLID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIEAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDICRKAYVSPY  411
            LE R+ M+QWW+D+LD  R   +SP+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

221) ST548_p7750 in NC_020181


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  375 bits (1408),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 210/386 (55%), Positives = 299/386 (78%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L S+++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K +E  G LEVA+R +Q+ + IMR AV+ GLID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIEAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDICRKAYVSPY  411
            LE R+ M+QWW+D+LD  R   +SP+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

222) A79E_1743 in NC_018522


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  375 bits (1408),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 210/386 (55%), Positives = 299/386 (78%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L S+++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K +E  G LEVA+R +Q+ + IMR AV+ GLID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIEAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDICRKAYVSPY  411
            LE R+ M+QWW+D+LD  R   +SP+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

223) KPR_3398 in NC_021232


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  375 bits (1408),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 210/386 (55%), Positives = 299/386 (78%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L S+++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K +E  G LEVA+R +Q+ + IMR AV+ GLID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIEAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLDICRKAYVSPY  411
            LE R+ M+QWW+D+LD  R   +SP+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

224) W5S_1636 in NC_017845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  374 bits (1407),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 222/390 (57%), Positives = 306/390 (79%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLVQNINPAQQR  85
            + LLV+P GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLL + ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERSTSSPEETFKSVALSWHKSNRAWSENHAARLLASMNNHIFPIIGHLPVTELKTRHF  145
              ++   S   TFK VA+ W  +N+ WSE+HA R+L S+++++F+ +G+  ++ELKTR++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgiekkglleVAARTRQHMCNIMRHAVHQELIEHNPAANLDGIVAPPVKRHYpalp  205
            +  +K++E  G LEVAAR +Q+   IMR AV+  LI+ NPA ++ G VA+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellaSIEDYKQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNKIWTIPATRE  265
            L R+PELL+ I+ Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIPGVRYSGRGAKMRTPHIVPLSRQSVAILKQIREISGHQELIFPGDHNRYKPMCENTVN  325
            +IPGV+ S RG+KMRT H+VPLSRQ++AILKQI+++ G ++LIF G+H+  KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKDEICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALRVMGYDTK E+CGHGFR+MACS+L+ESGLW++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDTNREEYVAPYIYAQ  415
            L+ R+ M+QWW+D+LD+NRE  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

225) Pecwa_1693 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  374 bits (1407),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 221/390 (57%), Positives = 312/390 (80%), Gaps = 1/390 (0%)

Query  26   LYLLVNSSGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            + LLV+++GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERTTSSPEKTFKHVALEWHKSNRSWSENHAARLLASMNNHIFPIIGHLPVTELKTRHF  145
              ++   S  +TFK+VA+EW  +N+ WSE+HA R+L S+++++F+ +G+  ++ELKTR++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgiekkglleVTARTRQHMCNIMRHAVHQELIENNPAANLDGIIAPPVKRHYpalp  205
            +  +K++E  G LEV+AR +Q+   IMR AV+  LI+ NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellaSIEDYKQGRELTRLAVSLTLHLFIRSSELRFARWSEINFRNKIWTIPATRE  265
            L R+PELL+ I+ Y  GR LTR A  LTL +FIRSSELRFARWSEI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  SIPGVRYSGRGAKMRTPHIVPLSRQSIAILKQIRDISGHQELIFPGDHNPYKPMCENTVN  325
            +IPGV+ S RG+KMRT H+VPLSRQ++AILKQI+++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKDEVCGHGFRTMACSALMESGVWPQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK EVCGHGFRTMACS+L+ESG+W++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDTNREGYIAPYIYAQ  415
            L+ R+ M+QWW+D+LD+NRE  I+P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

226) KPK_1811 in NC_011283


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  374 bits (1405),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 209/387 (55%), Positives = 305/387 (79%), Gaps = 1/387 (0%)

Query  26   LYILVKPGGSRHWYLKYRINGKESRLGLGAYPNVSLTDARQQRDDIRKLLAQKINPAQQR  85
            + +LV P GS+ W L+YR +GK+  L+LG YP+++L+DAR +RD+ RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   LTEKAARSPEKAFKAVALNWHKSNKTWSEDHANRVLGRMNNHIFPIIGHLTVTELKVQHF  145
              +K  +S  ++FK VA++W  +NK WSEDHA+RVL  +++++F+ +G+  ++ELK +++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  INLLKGVENKGLLEIASRTRQYISSIMRHALHQGLIEHNPAADLKGVTVPPIKRHYPAlp  205
            +  +K+VE  G LE+A+R +Q  ++IMR A++ GLI+ NPA ++ G   +  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellkrIDDYKQGRELTQLAIMLSLHVFIRSSELRFARWPEINFRNRLWTIPATRE  265
            L R+PELL +ID Y  GR LT+ A  L+L +FIRSSELRFARW+EI+F   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  TIPNVRNSGRGAKMRAQHIVPLSQQAIDILKQIREISGDQVLIFPSIRDPYKPMSENTIN  325
             IP V++S RG+KMR+ H+VPLS+QA+ ILKQI+++ G + LIF + +D+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMDYDTKEDVCGHGFRAMACSALIESGLWSEDAIERQMSHQERNSVRAAYIHKAEH  385
             ALR+M+YDTK +VCGHGFR+MACS+LIESGLWS DA+ERQMSH ERNSVRAAYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYIDECREKYVPPYN  412
            LE R+ M+QWW+D++D  REK ++P++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFE  386

227) intB in NC_013892


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  374 bits (1404),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 213/391 (55%), Positives = 316/391 (81%), Gaps = 2/391 (0%)

Query  26   LYLEITSRGSKYWHMKYRRPTDKKEDRLAFGVYPIVSLadarakrdeakkLIAQGSDPKA  85
            + L + + GSKYW+++YR   + K+  LA+GVYP ++LADAR +RDEA+KL+A+G DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EKRGTQLESKGAPSFEQVAREWHASNKRWSEDHSNRILRSLEHYIFPHIGKLDISTVRTS  145
             K+  ++E   A +F +VA EW ++NK+WSEDH++R+L+SLE+ +F+ +G  +I+ ++T 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  QLLAPIKSVDADGKHDIAQRLQQRVTSIMRYAVQNDILESNPANDMSGALSTVKAKHHPA  205
            +LLAPIK+V+  G+ ++A RLQQR T+IMRYAVQ+++++ NPA++M+GA+++ + +H+PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPHERLPEFLTRLSHYRGRLITQIAVELTLLTFVRSSELRFARWEELDLENAVWKIPATR  265
            L   R+PE+LT++  Y GR +T+ A ELTLL F+RSSELRFARW E+D+E ++W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  KPIEGVKFSERGMKMKTEHIVPLSRQAVSLFKILQGLSGECEVMFPHDHNPAKVMSESTV  325
             PI GVK S+RG KM+T H+VPLSRQA++++K ++ + G  +++F  +H++ K MSE+TV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRVMGYDTKTEVWGHGFRTMARGAMGESGLWNDDAIERQLSHVERKNVRAAYIHTSK  385
            N+ALRVMGYDTK EV GHGFRTMA +++ ESGLW+ DA+ERQ+SH+ER++VRAAYIH + 
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANREKYITPYDFAK  416
            HL+ERRLM+QWWAD+LDANREK I+P+++AK
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

228) PPS_0628 in NC_015733


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  373 bits (1402),  Expect = 8e-105, Method: Compositional matrix adjust.
 Identities = 227/392 (58%), Positives = 307/392 (79%), Gaps = 4/392 (1%)

Query  31   LYLLVKPSGVKTWRMKYTKPDGRDGLATFGNYPALGLKaarerraqalellaaGKDPIEQ  90
            + LLV P+G K WR++Y + +G++ + ++G YP + L  AR RR +A  LLA G DP ++
Sbjct  1    MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK  59

Query  91   ARLDKQEAANARANTFRLLAQEWHAACARKWTPGHAATVWRRIESHLLPTLGDRPVAELK  150
             + DK E ++AR  TF+ +A EW ++  +KW+ +HA  V + +E +L+++LG+R +AELK
Sbjct  60   KKNDKVEQSKAR--TFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  151  TRDLLVPLKAAEKRDTLDTAARLRQYMTGILRMAVQHGHLDFNPAIDLQGATATRKTAHR  210
            TRDLL P+KA E  + L+ AARL+Q  T+I+R AVQ G +D+NPA ++ GA A+ +  HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  211  PALPFDRLPELLQRIDADSGRGLTKLAVQLTLLVFIRSSELRFARWGEIDMGRLMWEIPG  270
            PAL + R+PELL +ID+ +GR LT+ A +LTLL+FIRSSELRFARW+EID    +W IP 
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  271  ERAPIEGVKNSHRGSKMSTPHLVPLSRQSVSVLERIRDLTGRFDLVFAGDHHHWKPMSEN  330
            ER PI GVK+SHRGSKM T HLVPLSRQ++++L +I+++ G  DL+F G+H+  KPMSEN
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  331  TVNKALRRMGYDTKSEVCGHGFRTMACSALVESGLWSKDAVERQMSHQERNTVRAAYIHK  390
            TVN ALR MGYDTK EVCGHGFRTMACS+L+ESGLWS+DAVERQMSH ERN+VRAAYIHK
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  391  AEHIQERRLMVQWWADYLDANRVEAITPYDFA  422
            AEH++ERRLM+QWWAD+LDANR  +I+P+++A
Sbjct  357  AEHLEERRLMLQWWADFLDANREKGISPFEYA  388

229) intB in NC_014228


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  372 bits (1400),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 217/393 (56%), Positives = 315/393 (81%), Gaps = 2/393 (0%)

Query  26   LYLEVTSRGSKYWRMKYRRPTDKKEDRLAFGVYPTVSladarakrdeakkllaQGINPKA  85
            + L V + GSKYWR++YR   + K+  LA+GVYP ++LADAR +RDEA+KLLA+G++P  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEAQSESEGVFTFEHIAREWRASNKRWSEDHSGRIMRSLEQYIFPHIGALDVRTLRTS  145
             +K+ + E     TF ++A EW ++NK+WSEDH+ R+++SLE+ +F+ +G  ++  L+T 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLTPIKSVDINGKHDVAQRLQQRVTAIMRYAVQNGILEYSPANDMAGALTIVKSKHHAA  205
            +LL+PIK+V+++G+ +VA RLQQR TAIMRYAVQ+G+++Y+PA++MAGA++  + +H++A
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPHECLPEFLTRLSCYRGRLITRIAVELTLLTFVRSSEMRFARWEEIDLERAVWCVPATR  265
            L    +PE+LT++  Y GR +TR A ELTLL F+RSSE+RFARW EID+E ++W +P+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  KLIEGVKHSQRGMKMKTEHIVPLSRQAVLLIEKLHGLSGDSEVMFPGDHDPKKVMSENTV  325
              I GVKHS+RG KM+T H+VPLSRQA+ ++ ++  + G  +++F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRAMGYDTKTEVCGHGLRTMARGAMGESGLWSDDAIERQLSHIERNNVRAAYIHTSK  385
            N+ALR MGYDTK EVCGHG+RTMA +++ ESGLWS DA+ERQ+SH+ERN+VRAAYIH + 
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERRLMVQWWADYLDANREKHITPYDFAKTS  418
            HL+ERRLM+QWWAD+LDANREK I+P+++AK +
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKIN  391

230) Rahaq2_2006 in NC_016818


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  371 bits (1394),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 215/390 (56%), Positives = 302/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRIDRKESRLGLGAYPDVSLAYARQQRDSIRKLLAQNINPAQQR  85
            + LLV+P GS+ W L+YR + K+  L+LG YP+++LA AR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERTPSTPEKTFKHVALEWHNSNRTWSENHATRLLASMNNHIFPIIGHLQVTELNTRHF  145
              ++   +  +TFK+VA+EW  +N+ WSE+HA R+L S+++++F+ +G+ +++EL+TR++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKRIEKKGLLEVAARTRQHMCNIMRHAVHQELIENNPAANLEGIIAPPVKRHYPAlp  205
            +  +K +E  G LEVAAR +Q+   IMR AV+  LI+ NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpelliriKDYQQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFRNRIWTIPATRE  265
            L R+PELL +I  Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIPGVLYSGRGAKMRTPHIVPLSRQSIAILKQIREISGHQVLVFPGDHNPYKPMCENTVN  325
            +IPGV  S RG+KMRT H+VPLSRQ++AILKQI+++ G + L+F G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK E+CGHGFR+MACS+L+ESGLW++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMCRKAYAPPYICGK  415
            L+ R+ M+QWW+D+LD  R    +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

231) M621_16100 in NC_021659


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  371 bits (1393),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 297/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            + LLV+P GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERATALLEETFKSVALSWHKSNRTWSENHATRLLASMNNHIFPIIGHLPVSELKPRHF  145
              ++       TFK VA+ W  +N+ WSE+HA R+L S+++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKGIEQKGLLEVAARTRQHMCNIMRHAVHQELIKHNPAANLDGIIAPPVKRHYPAlp  205
            +  +K++E  G LEVAAR +Q+   IMR AV+  LI  NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  leqlpellTRIKDYKQGRELTRLAVSLTLHLFIRSSELRFARWSEIDFKNRIWTIPATRE  265
            L ++PELLT+I  Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  SIPGVRYSGRGAKMRIPHIVPLSCQSIAILKQIREISGHQVLVFPGDHNPYKPMCENTVN  325
            +IPGV+ S RG+KMR  H+VPLS Q++AILKQI+++ G + L+F G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK E+CGHGFR+MACS+L+ESGLW++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMCRKEYAPPYICGK  415
            L+ R+ M+QWW+D+LD  R    +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

232) int in NC_012731


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  368 bits (1383),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 303/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+ GLID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIEGYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSERGAKMRMPHIVPLSEQAIAILKQIKDITGNNELVFPGDHNPYKPMCENTVN  325
            PI GV+ S+RG+KMR  H+VPLS QA+AILKQIK++ G ++L+F G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

233) int in NC_011751


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 302/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMSENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

234) KPHS_34600 in NC_016845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  366 bits (1375),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 302/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMSENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

235) CKO_00917 in NC_009792


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  364 bits (1369),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

236) ST548_p7779 in NC_020181


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  364 bits (1369),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

237) A79E_1712 in NC_018522


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  364 bits (1369),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

238) YPA_1295 in NC_008150


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  363 bits (1364),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH E+N+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

239) int2 in NC_005810


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  363 bits (1364),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH E+N+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

240) int in NC_003143


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  363 bits (1364),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH E+N+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

241) int in NC_017154


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  363 bits (1364),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH E+N+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

242) int in NC_017160


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  363 bits (1364),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH E+N+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

243) y2393 in NC_004088


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  363 bits (1364),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH E+N+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

244) YPDSF_1208 in NC_009381


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  363 bits (1364),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH E+N+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

245) Pecwa_3419 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  362 bits (1360),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  25   LYLTVSTSGAKLWYFRYRFGGKENRLAFGPYPQTTlaearekrdaarkllaSGISPSQLR  84
            + L V  +G+K W ++YR+ GK++ LA+G YP+ TLA+AR +RD ARKLLA+G+ P++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KSNNPAVDESRTFQYVATAWHTSSLKLWSDAHADKILICLKRYVFPAIGAMDIAQVETRH  144
            K+++     +RTF+ VA  W  ++ K WS+ HA+++L  L   +F+A+G  +IA++ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   +KA++  G  +VA+R++Q+ T IMR AVQ G+I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  PLKRLPELLVKMENYKGRELTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             LKR+PELL K+++Y GR LTR A EL L +F+RSSELRFARW E+++ A IW++P++RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVKGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+ S+RG+KM+  HLVPLSRQA+A+LKQI+ + G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEICGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK E+CGHGFRTMACS+L ESG WS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

246) Dd703_3034 in NC_012880


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  362 bits (1360),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 212/394 (54%), Positives = 302/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSASGAKLWYFRYRLGGKESRLAFGPYPQTTLAEAREKRDVARKLLASGISPSQLR  84
            + L V ++G+K W ++YR  GK+  LA+G YP+ TLA+AR +RD ARKLLA+G+ P++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KANNPAVEESRTFQYVAQAWHTSSLKLWSEAHADKILTCLKRYVFPTIGAMDIAQVETRH  144
            K ++     +RTF+ VA  W  ++ K WSE HA+++L  L   +F+++G  +IA++ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVVTQHHPAl  204
            L   +KA++  G  +VA+R++Q+ T IMR AVQ G+I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  plkrlpellekMENYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             LKR+PELL K+++Y GR LTR A EL L +F+RSSELRFARW E+++ A IW++P++RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQALSGESVFVFPGAHTLNKPMSENTVN  324
            ++ GV+ S+RG+KM+  HLVPLSRQA+A+LKQI+ + G   ++F G H  +KPMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEICGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK E+CGHGFRTMACS+L ESG WS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYARSHSA  418
            LE R  M+QWW+D+LD NRE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

247) KPN2242_15195 in NC_017540


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  361 bits (1358),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 207/393 (53%), Positives = 308/393 (79%), Gaps = 1/393 (0%)

Query  26   LYLLIKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LL+ P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   ASERRACTPEKVFKTVALAWHKNNKKWSQNTADRLLASMNNHIFPVIGHLSVTELKPHHF  145
             +++   +  + FK VA+ W   NKKWS++ A+R+L S+++++F+ +G+ +++ELK +++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQGFIDTNPAANLDGVTAPPMRHHYPALP  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+ G+ID NPA ++ G  A+  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LERLPELIEHIEAYHQGREltrlavlltlhlFIRSSELRFARWSEIDFINRIWTIPATRE  265
            L R+PEL+  I++Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIVGVRYSGRGAKMRTAHIVPLSQQAIAILKRIKEISGAYELVFPGDHNPYRPMCENAVN  325
            +I GV+ S RG+KMRT+H+VPLS+QA+AILK+IK++ GA +L+F G+H++ +PM EN+VN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGFDTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR+MG+DTK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYIDTCRVAYVPPFNTGRDKN  418
            LE R+ M+QWW+D++D+ R   ++PF+ ++ +N
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINN  392

248) EbC_39600 in NC_014306


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  361 bits (1356),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 222/391 (57%), Positives = 305/391 (79%), Gaps = 2/391 (0%)

Query  26   LYLEVTTKGSKYWRMKYRRPADKKEDRLAFGVWPTVTLaearakrdeakkMLGQGIDPka  85
            + L V  +GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+K+L++G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   eqkeaqaeNAGAYTFETIAREWHASNKRWSDDHRSRIMRYLELYIFPHIGLADVRRLKTS  145
             +K+ + E++ A TF  +A EW ++NK+WS+DH  R+++ LE  +F+ +G  ++  LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  QLLAPIKSVDASGRHDVAQRLQQRVTAIMRYAVQNDYIESNPAVDMAGALSTVKARHYPA  205
            +LLAPIK+V+ SGR +VA RLQQR TAIMRYAVQ++ I+ NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPFSGFPEFLERLAAYRGRIMTRIAVELSLLTFVRSSELRFARWDEFDFERALWRVPAQR  265
            L +  +PE+L ++ +Y GR +TR A EL+LL F+RSSELRFARW E+DFE ++W +P++R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  KEIEGVRYSHRGMKMKEEHLVPLSSQVLALLEKLKQLSGDNERLFPGDHDPKKVMSENTV  325
              I GV+ SHRG KM+  HLVPLS Q LA+L ++KQ+ G ++ +F G+HD+ K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  385
            N+ALR MGYDTK EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDERCLMVQWWADYLSINRECYISPFDYAK  416
            HL+ER LM+QWWAD+L  NRE  ISPF+YAK
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

249) YpAngola_A2104 in NC_010159


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  361 bits (1356),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 300/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRGMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQEHNTVRMAYIHKAEH  385
             ALR MGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH E+N+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

250) int in NC_011748


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  361 bits (1355),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 300/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYQAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG Y  I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNLALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK++A+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

251) O3M_09700 in NC_018650


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  361 bits (1355),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 300/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYQAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG Y  I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNLALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK++A+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

252) O3O_15890 in NC_018661


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  361 bits (1355),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 300/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYQAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG Y  I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNLALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK++A+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

253) O3K_09735 in NC_018658


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  361 bits (1355),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 300/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLLVKPGGSRHWYLKYRISGKESRIALGAYQAISLSDARQQREGIRKMLALNINPVQQR  85
            + LLV P GS+ W L+YR  GK+  +ALG Y  I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRTPEKVFKNLALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
              ++  ++  + FK++A+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

254) Rahaq2_2650 in NC_016818


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  360 bits (1351),  Expect = 9e-101, Method: Compositional matrix adjust.
 Identities = 216/390 (56%), Positives = 302/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            + LLV+P GS+ W L+YR + K+  L+LG YP+++LADAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERTPSTPEKTFKHVALEWHNSNRTWSENHASRLLASMDNHIFPVIGHLPVAELKPRHF  145
              ++   +  +TFK+VA+EW  +N+ WSE+HA R+L S+++++F+ +G+  +AELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKSIEKKGLLEVAARTRQHMYNIMRHAVHQELTEHNPAANLDGIIAPPIKRHYPAlp  205
            +  +K++E  G LEVAAR +Q+   IMR AV+  L + NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellirirDYQQGREltrlavlltlhlFIRSSELRFARWSEIDFKNRIWTIPATRD  265
            L R+PELL +I  Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   IWTIP+ R+
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  SIPGVRYSGRGAKMRTPHIVPLSRQAITILKQIWEISGHQELIFPGDHNPYKPMCENTVN  325
            +IPGV+ S RG+KMRT H+VPLSRQA++ILKQI ++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKDEICGHGFRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK E+CGHGFR+MACS+L+ESGLW++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMCRKAYAPPYICGK  415
            L+ R+ M+QWW+D+LD  R    +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

255) SG1638 in NC_007712


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  359 bits (1349),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 217/391 (56%), Positives = 302/391 (78%), Gaps = 2/391 (0%)

Query  26   MYLEVTPRGSKYWRMKYHRPSDRKEDKLSFGVYPAITlaearakrdeakkllakGLDPKK  85
            M L V P GSKYWR++Y+   + K+  L++GVYP ITLA+AR +RDEA+KLLA+G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   VQKKEHAENNGEFTFESIARKWHSNNRRWENVTRNLILNSLEKYVFPIIGKNDIRQLKTR  145
             +K++  E++   TF  +A  W + N++W +   + +L+SLE  +F+ +G  +I +LKTR
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAVVRAVEENGKHEVAQRIQQRITSIMRYAVQNEIIETNPALDMAGALIPPKSVHHPA  205
            +LLA ++AVE +G+ EVA R+QQR T+IMRYAVQ+ +I+ NPA +MAGA+ + +  H+PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LAPIMLPQFFARLTSYKGRKITRIAVELNLLTFVRSSELRFARWKEIDFEHALWEIPAKR  265
            L    +P++++++ SY GR +TR A EL LL F+RSSELRFARW EIDFE ++W IP+ R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EPIAGVRYSERGMKMKSSHLVPLSKQAIELLKQLKVQRGDEAHIFPGDHDIKGVMSENTV  325
            EPI+GV+ S+RG KM+++HLVPLS+QA+ +LKQ+K   G +  IF G+HD    MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NKALRVMGYDTKTEICGHGFRTMARGAMGESGLWADDVIELQMSHIERNGVKAAYLHTTK  385
            N ALRVMGYDTK E+CGHGFRTMA +++ ESGLW+ D +E QMSH+ERN+V+AAY+H + 
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLEERRLMMQWWADYLDANREHYISPYDFAK  416
            HLEERRLM+QWWAD+LDANRE  ISP+++AK
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

256) ECNA114_2039 in NC_017644


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  359 bits (1350),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 211/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLRVKPGGSRHWYLKYRISGKESRIALGTYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + L V P GS+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
               +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

257) LHK_01737 in NC_012559


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  359 bits (1350),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 215/414 (52%), Positives = 300/414 (73%), Gaps = 20/414 (4%)

Query  30   LYLLINPNGSKYWRMNYRINGKQKTLAIGVYCQFALVDDKGKARAEQVIMSLADARLHCD  89
            + LL++PNGSKYWR++YR +GKQK LA+GVY +                ++LADAR++ D
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----------------ITLADARVRRD  44

Query  90   AARAMLAKGIDPFETKQEAKKAANGLSPGSFAYVAREWHAKMANKWVPSHAANVLGRLER  149
             AR +LA+G+DP + K++ K   +   + +F  VA EW +   +KW   HA  VL  LE 
Sbjct  45   EARKLLANGVDPGDKKKNDKVEQS--KARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLED  101

Query  150  YIFPDIGHMPFAEIRTKHMLMALRKVEAKNILDVTSRLRQYLKQIGRYAVQTGRIDFNPG  209
             +F+ +G+  +AE++T+++L +++ VE    L+V++RL+Q    I RYAVQ+G ID+NP+
Sbjct  102  NLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA  161

Query  210  NDLDGALQTRRTVHRPALSLNRLPELLERIDAAKLRPLTRAAISLTLLTFVRSSELRFAR  269
            +++ GA+ +    HRPAL L+R+PELL +ID+   RPLTR A  LTLL F+RSSELRFAR
Sbjct  162  QEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFAR  221

Query  270  WEEIDFDRAVWLIPGEREALPGVKFSSRGAKMRTPHLVPLCQQALALFREVHAITGRFEL  329
            W EIDF+ ++W IP ERE++PGVK S RG+KMRT HLVPL +QALA+++++  + G  +L
Sbjct  222  WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDL  281

Query  330  VFAGDHDPYKPMSESTVNIALKRMGYDTKTEVCGHGFRAMACSALSESGQFSIEAIERQM  389
            +F G+HD+ KPMSE+TVN AL+ MGYDTK EVCGHGFR+MACS+L ESG  S +A+ERQM
Sbjct  282  IFIGNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQM  341

Query  390  SHQERDSVRAAYTHKAEFLTERRDMMGWWADFLDAQREGTYIEPLEFKRGESNV  443
            SH ER+SVRAAY HKAE L ERR M+ WWADFLDA+RE   I P+E+ + ++ +
Sbjct  342  SHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDANREKG-ISPFEYAKINNPL  394

258) PC1_0858 in NC_012917


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  359 bits (1348),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 208/390 (54%), Positives = 302/390 (78%), Gaps = 1/390 (0%)

Query  25   LYLTVSTSSAKLWYFRYRFGGKENRLAFGPYPQITlaearekrdaarkllaSGISPSQLR  84
            + L V  +++K W ++YR+ GK++ LA+G YP+ITLA+AR +RD ARKLLA+G+ P++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KSNNPAVDESHTFQYVTMAWHSSCLKLWSEAHADKILTCLKRYVFPAIGAMDIVQVETRH  144
            K+++     ++TF+ V++ W ++  K WSE HA+++L  L   +F+A+G  +I ++ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVATQHHPAL  204
            L   +KA++  G  +VA+R++Q+ T IMR AVQ G+I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  PLKRLPELLGKMENYKGRMLTRMALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             LKR+PELL K+++Y GR LTR A EL L +F+RSSELRFARW E+++ A IW++P++RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+ S+RG+KM+  HLVPLSRQA+A+LKQI+ + G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK EVCGHGFRTMACS+L ESG WS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSNYLDVNRDGYVAPYIYAR  414
            LE R  M+QWW+++LD NR+  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

259) int in NC_011750


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  358 bits (1345),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLRVKPGSSRHWYLKYRISGKESRIALGTYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + L V P +S+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
               +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

260) CE10_2255 in NC_017646


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  358 bits (1345),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLRVKPGSSRHWYLKYRISGKESRIALGTYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + L V P +S+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
               +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

261) NRG857_09860 in NC_017634


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  358 bits (1345),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  26   LYLRVKPGSSRHWYLKYRISGKESRIALGTYPAISLSDARQQREGIRKMLALNINPVQQR  85
            + L V P +S+ W L+YR  GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P +++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF  145
               +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  PIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN  325
            PI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH  385
             ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LEARKAMMQWWSDYLEACRESYAPPYTIGK  415
            LE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

262) int in NC_011740


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  358 bits (1346),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 210/394 (54%), Positives = 299/394 (76%), Gaps = 4/394 (1%)

Query  49   LYLLVRKTGGKYWRMNYRFDGKQVTLALGVYPDVSLATARKRRDEARQLLADGRDPREAK  108
            + LLV+  G+KYWR++YR++GKQ  LALGVYP+++LA AR RRDEAR+LLA+G DP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  109  KPKK-EDPISPTFESVAREWHSGTMGHPEWKEITRKKILREMENHLFPAIGSKPIDTLKT  167
            K  K E++ + TF  VA EW +       W E    ++L+ +E++LF+A+G + I  LKT
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNK---KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  168  RDLMPMLVEMTEKGIGATTSRVKTTMTSIFRYAVQRGIVDYNPAHDLKGAITAPKVRHrp  227
            RDL++ +  +   G    ++R++   T+I RYAVQ G++DYNPA+++ GA+++ + +HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  228  alplerlpellaKTRSYTGRPLTRLAVLFSLHTFVRSSELRHARWEEIDIENGLWTIPGQ  287
            AL L R+PELL+K  SYTGRPLTR A  ++L  F+RSSELR ARW EID+E ++WTIP +
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  288  REEIAGVKFSDRGAKMGAAHYVPLSSQAIGVLEDIRKISGEYLLVFPGDSNPYKPMSENT  347
            RE I+GVK S+RG+KM ++H VPLS QA+++L +I+++ G   L+F G+ ++ KPMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  348  VNKALRTMGYDTQTDVCLHGFRAMACSALTESGLWSRDAVERQMSHQERNEVRAAYVHLA  407
            VN ALR MGYDT+ +VC HGFR+MACS+L ESGLWSRDAVERQMSH ERN VRAAY+H A
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  408  QHMQERRRMMQWWSNYLELNKDEFHAPYDLSGIN  441
            +H++ERR M+QWW+++L+ N++   +P++ + IN
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFEYAKIN  391

263) KPK_1842 in NC_011283


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  358 bits (1344),  Expect = 4e-100, Method: Compositional matrix adjust.
 Identities = 208/386 (54%), Positives = 300/386 (78%), Gaps = 1/386 (0%)

Query  26   LYLLIKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LL+ P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGACTPEKLFKTVALAWHKSNTKWSKNTADRLLASLNNHVFPVIGHLSVSELKPRHF  145
              ++   +  + FK VA+ W  +N KWS + A+R+L SL++++F+ +G+ +++ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgiekkglleVASRTRQHLSNIMRYAVHQGVIDSNPAANLDGVTTPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ G+ID NPA ++ G  ++  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpelieriDGYHQGRELTRLAVLLTLHVFIRSSELRFARWSEIDFRNRVWTIPGTRE  265
            L R+PEL+ +ID+Y  GR LTR A  LTL +FIRSSELRFARWSEIDF   +WTIP  RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIEGVRYSGRGAKMRTPHIVPLSEQAIAILKRIRDISGDGELVFPGDHNPYKPMCENTVN  325
            +I GV+ S RG+KMRT H+VPLS QA+AILK+I+++ G  +L+F G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKKDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR+MGYDTK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDTCREAYVPPY  411
            L+ R+ M+QWW+D+LD+ RE  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

264) ECP_1962 in NC_008253


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

265) ECABU_c22620 in NC_017631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

266) c2449 in NC_004431


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

267) i14_2259 in NC_017652


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

268) i02_2259 in NC_017651


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

269) ECOK1_2168 in NC_017628


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

270) intA_3 in NC_022370


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

271) UM146_07190 in NC_017632


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

272) UTI89_C2204 in NC_007946


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 209/386 (55%), Positives = 302/386 (79%), Gaps = 1/386 (0%)

Query  26   LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR  85
            + LLV P GS+ W L+YR +GK+  +ALG YP ++L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF  145
              ++  + + + FK VA+EW +++KKWS++ A+RVL  L+ ++F+++G+  ++ELK+R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  iellkgieekglleVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTlp  205
            +  +K++E  G LEVA+R +Q+ + IMRYAV+ GLI+ NPA ++ G  AS  R+H P+L 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellerIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE  265
            L R+PELL +IDSY  GR LTR A  LTL +FIRSSELR+ARW+EI+F   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN  325
            +I+GV+ S RG+KMRT H+VPLS Q ++ILK+IK++ G+ +L+F G HD+ KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH  385
             ALR MGY+TK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERN+VR AYIHKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  MEARMDMMQWWSDYLDMCSEIWVPPY  411
            +E R  M+QWW+D+LD   E  ++P+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPF  385

273) int in NC_003198


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 213/394 (55%), Positives = 300/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSTSGSKLWYFRYRFEGKENRLAFGPYPQVTlaearekrdaarkllVSGVCPSLPR  84
            + L V  +GSK W ++YR+EGK++ LA+G YP++TLA+AR +RD ARKLL +GV P+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KAEKAAVDGTRTFQYIATAWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRH  144
            K +K     +RTF+ +A  W ++  K WSEDHA+++L  L   +F+ +G  +IAE+ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   +K+++  G  +VA+R++Q+ T IMR AVQ G I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  PLKRLPELLDKINGYKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKRE  264
             LKR+PELL KI++Y GR LTR A EL L +F+RSSELR+ARW E+++ A IWT+P+ RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVKNVRFSERGAKMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTIN  324
            ++  V+ S+RG+KM+  HLVPLS QA+A+L QIK++ G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK EVCGHGFRTMACS+L ES+LWS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARMEMMQWWSDYLDMSREGYVAPYIYARRHKA  418
            LE R  M+QWW+D+LD +RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

274) STBHUCCB_46270 in NC_016832


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 213/394 (55%), Positives = 300/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSTSGSKLWYFRYRFEGKENRLAFGPYPQVTlaearekrdaarkllVSGVCPSLPR  84
            + L V  +GSK W ++YR+EGK++ LA+G YP++TLA+AR +RD ARKLL +GV P+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KAEKAAVDGTRTFQYIATAWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRH  144
            K +K     +RTF+ +A  W ++  K WSEDHA+++L  L   +F+ +G  +IAE+ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   +K+++  G  +VA+R++Q+ T IMR AVQ G I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  PLKRLPELLDKINGYKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKRE  264
             LKR+PELL KI++Y GR LTR A EL L +F+RSSELR+ARW E+++ A IWT+P+ RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVKNVRFSERGAKMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTIN  324
            ++  V+ S+RG+KM+  HLVPLS QA+A+L QIK++ G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK EVCGHGFRTMACS+L ES+LWS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARMEMMQWWSDYLDMSREGYVAPYIYARRHKA  418
            LE R  M+QWW+D+LD +RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

275) int in NC_004631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 213/394 (55%), Positives = 300/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSTSGSKLWYFRYRFEGKENRLAFGPYPQVTlaearekrdaarkllVSGVCPSLPR  84
            + L V  +GSK W ++YR+EGK++ LA+G YP++TLA+AR +RD ARKLL +GV P+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KAEKAAVDGTRTFQYIATAWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRH  144
            K +K     +RTF+ +A  W ++  K WSEDHA+++L  L   +F+ +G  +IAE+ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   +K+++  G  +VA+R++Q+ T IMR AVQ G I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  PLKRLPELLDKINGYKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKRE  264
             LKR+PELL KI++Y GR LTR A EL L +F+RSSELR+ARW E+++ A IWT+P+ RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVKNVRFSERGAKMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTIN  324
            ++  V+ S+RG+KM+  HLVPLS QA+A+L QIK++ G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK EVCGHGFRTMACS+L ES+LWS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARMEMMQWWSDYLDMSREGYVAPYIYARRHKA  418
            LE R  M+QWW+D+LD +RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

276) int in NC_009648


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  357 bits (1340),  Expect = 9e-100, Method: Compositional matrix adjust.
 Identities = 201/348 (58%), Positives = 281/348 (81%), Gaps = 1/348 (0%)

Query  2    REEAQLLLISGIDPSAHRKAERLAITPEHTFESVAREWVTSNVNWSAEHKKRVLRYFELY  61
            R+EA+ LL +G+DP+  +K +++  +  +TF  VA EW  +N +WS +H  RVL+ +E  
Sbjct  43   RDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDN  102

Query  62   VFPTNGSCDITKMKVKDLLVPIKEVEKAGKLDVASRLQQRTACVMRYAVQNGIIDHNPAS  121
            +F++ G  +I+ +K +DLL PIK VE +G+L+VA+RLQQRT+ +MRYAVQ+G+ID NPA 
Sbjct  103  LFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQ  162

Query  122  DLTGAVSTPKVRHHPALDLNLIPDFLERVDDFKGRkltqlavklalllFIRSSELRFARW  181
            +++GAV++ + +H+PAL+L+ IP++L ++D + GR LT+ A  L+LL+FIRSSELRFARW
Sbjct  163  EMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARW  222

Query  182  DEIDLRNAMWTIPAEREPIPGVKYSARGAKMHSPHLVPLSRQAIELLHKVRQHCRPGTEL  241
             EID+  ++WTIP+EREPIPGVK S RG+KM++ HLVPLSRQA+ +L +++Q C  + +L
Sbjct  223  SEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC-GAHDL  281

Query  242  VFPGDHNYRKPMSENTINKALRVMGYDTQKDVCGHGFRTMACSALVESGLWSSDAVERQM  301
            +F G+H+ +KPMSENT+N ALRVMGYDT+ +VCGHGFRTMACS+L+ESGLWS DAVERQM
Sbjct  282  IFIGNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQM  341

Query  302  SHQERKRVRAAYIHKAQHLEERREMMQWWADYLDANRFRHVVPYGFKK  349
            SH ER+ VRAAYIHKA+HLEERR M+QWWAD+LDANR + + P+ + K
Sbjct  342  SHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

277) TY21A_22260 in NC_021176


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  356 bits (1338),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 212/394 (54%), Positives = 300/394 (77%), Gaps = 1/394 (0%)

Query  25   LYLTVSTSGSKLWYFRYRFEGKENRLAFGPYPQVTlaearekrdaarkllVSGVCPSLPR  84
            + L V  +GSK W ++YR+EGK++ LA+G YP++TLA+AR +RD ARKLL +GV P+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KAEKAAVDGTRTFQYIATAWHSSCLKLWSEDHADKILTCLKRYVFPDIGAMDIAEVETRH  144
            K +K     +RTF+ +A  W ++  K WSEDHA+++L  L   +F+ +G  +IAE+ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGTIKYNPAYDLDGVVTPVVTQHHPAL  204
            L   +K+++  G  +VA+R++Q+ T IMR AVQ G I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  PLKRLPELLDKINGYKGRELTRLALELNLHVFLRSSELRLARWDEFNLKARIWTVPAKRE  264
             LKR+PELL KI++Y GR LTR A EL L +F+RSSELR+ARW E+++ A IWT+P+ RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVKNVRFSERGAKMKDEHLVPLSAQAVALLEQIKEITGESVFVFAGAHSMNKPMSENTIN  324
            ++  V+ S+RG+KM+  HLVPLS QA+A+L QIK++ G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGMRAAYVHKAEH  384
             ALRV+GYDTK EVCGHGFRTMACS+L ES+LWS+DA+ERQMSH ERN++RAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARMEMMQWWSDYLDMSREGYVAPYIYARRHKA  418
            LE R  M+QWW+D+LD +RE  ++P+ YA+ +++
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAKINNP  393

278) int in NC_015761


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  355 bits (1334),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 208/388 (54%), Positives = 293/388 (76%), Gaps = 0/388 (0%)

Query  31   LYLLIKPNGSKLWYMKYRIDGKEKKLAFGPYPDVSLLTARQLRDAARIKMREGVDPSVDK  90
            + LL+ PNGSK W ++YR +GK+K LA+G YP+++L  AR  RD AR  + +GVDP+  K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  91   KIAQQKKKNGQTFRQIAINWHADHRRWSEHYATTIRRRLEMYIFPDIGDRYIDQIVTEDL  150
            K  +  + +++TF+++AI+W + +++WSE+ A  + + LE  +F+ +G+R I ++ T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  151  LFTLRKVENKGFLEITARLKNYVTEIMRYAVKKQLIRSNPALDLDGEFTPPETQHYPAlp  210
            L  ++ VE  G LE++ARL++  T IMRYAV+  LI  NPA ++ G  ++ + QH PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  211  leklpellSRTDNYSGRLLTRYALKLSLLFFVRSSELRFARWSEIDWQQKLWIIPEEREQ  270
            L ++PELL++ D+Y+GR LTR A  L+LL+F+RSSELRFARWSEID +  +W IP ERE 
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  271  IENVRFSHRGTKMKTQHIVPLSDQAMAILKQTEALSGHLAFIFPGEYDQDKCMSDNTISK  330
            I  V+ SHRG+KM+T H+VPLS QA+AILKQ   + G   +IF G+ D +K MS+NT++ 
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  331  ALRVMGYDTRKEICGHGFRAMACSALSESGLWSKEAIEKQMSHQERNSVRAAYIHKAEYL  390
            ALRVMGYDT+ E+CGHGFR+MACS+L ESGLWS++A+E+QMSH ERNSVRAAYIHKAE L
Sbjct  301  ALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHL  360

Query  391  EERINMMQWWADYLDANTKRHVSPYQFA  418
            EER  M+QWWAD+LDAN  + +SP+++A
Sbjct  361  EERRLMLQWWADFLDANREKGISPFEYA  388

279) PputW619_4935 in NC_010501


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  355 bits (1332),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 206/393 (53%), Positives = 288/393 (74%), Gaps = 4/393 (1%)

Query  31   LYLLVKPNGRKGWRLRYVKPDGREGLTSLGNYPVVGLADARHKRFELKQQLANGIDPIQS  90
            + LLV PNG K WRL+Y + +G++ + +LG YP + LADAR +R E ++ LANG+DP + 
Sbjct  1    MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK  59

Query  91   KQQAKVQAVINGRTFESVALDWYAGMVPKWAPGHAKTVLSRLKTHVFPLLGARAIVELDT  150
            K++ KV+   ++RTF  VA++WY G   KW+ +HA  VL  L  ++F+ LG R I EL T
Sbjct  60   KKNDKVEQS-KARTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  151  HDLMQPLEAVTKRGTIDVALRIKNYLQSIMREAKRLRLITANPAHDLDGSIKTPRVTHRP  210
            +DL+ P+ AV   G ++VA R+++   +IMR A +  LI  NPA+++ G++ +    HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  211  ALPLSRLPELQARIDGYKGRPLTRLTVMLSLHVFVRSSELRFARWNEFDLKRGIWEIPDT  270
            AL L R+PEL ++ID+Y GRPLTR +  L+L +F+RSSELRFARW+E+D+  +IW IP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  271  RPALDGVPFSTRGTKMAGDIHVVPLSPQAVALLEQIHAITGKFELVFAGDAKPWKPMSEN  330
            R ++ GV  S RG+KM    H+VPLS QA+A+L QI  + G  +L+F G+  + KPMSEN
Sbjct  238  REPIPGVKHSHRGSKMRT-THLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  331  TVNAALRTMGYDTKVDICGHGFRAMACSALVESGLWSETAIERQMSHKERNNVRAAYTHK  390
            TVN+ALR MGYDTKV++CGHGFR+MACS+L+ESGLWS  A+ERQMSH ERN+VRAAY HK
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  391  AEFLEERRMIMTWWSRFLEANREDHVTPHEFAR  423
            AE LEERR+++ WW+ FL+ANRE  ++P E+A+
Sbjct  357  AEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

280) Rahaq2_1748 in NC_016818


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  354 bits (1329),  Expect = 5e-99, Method: Compositional matrix adjust.
 Identities = 214/390 (55%), Positives = 305/390 (79%), Gaps = 1/390 (0%)

Query  26   LYLLVNPGGSRLWYLKYRIDGKESRLGLGAYPDVSLADARQQRDGIRKLLAQNINPAQQR  85
            + LLV+P GS+ W L+YR +GK+  L+LG YP+++LADAR +RD  RKLLA+ ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   SAERATSSPEKTFKYVALDWHKSNRTWSENHASRLLASMNNHIFPVIGHLPVAELKPRHF  145
              ++   S  +TFK VA++W  +N+ WSE+HA R+L S+++++F+ +G+  +AELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDLLKGIEQKGLLEVAARTRQHMCNIMRHAIHQDLIKNNPAANLEGIIAPPVKRHYpalp  205
            +  +K++E  G LEVAAR +Q+   IMR A++ +LI  NPA ++ G +A+  ++H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellarIEDYQQGREltrlavlltlhlFIRSSELRFACWSEIDFKNRIWTIPATRE  265
            L R+PELL++I+ Y  GR LTR A  LTL +FIRSSELRFA WSEIDF   IWTIP+ RE
Sbjct  181  LKRIPELLTKIDSYT-GRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIPGVRYSERGAKMRTPHIVPLSRQSIAILKQIREISGHRVLIFPGDHNPYKPMCENTVN  325
            +IPGV+ S+RG+KMRT H+VPLSRQ++AILKQI+++ G + LIF G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMRYDTKNEICGHGLRAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+M YDTK E+CGHG+R+MACS+L+ESGLW++DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLDMCPKQYVPPYICGK  415
            L+ R+ M+QWW+D+LD    + ++P+  +K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

281) L483_01150 in NC_021491


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  352 bits (1321),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 205/393 (53%), Positives = 287/393 (74%), Gaps = 4/393 (1%)

Query  31   LYLLVKPNGRKGWRVRYLKPDGREGLTSLGNYPVVGLADARQKRFELKQQLANGIDPIQS  90
            + LLV PNG K WR++Y + +G++ + +LG YP + LADAR +R E ++ LANG+DP + 
Sbjct  1    MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK  59

Query  91   KQQAKVQAVINGRTFESVALDWYAGMVPKWAPGHAKTVLSRLKTHVFPLLGARAIVELDT  150
            K++ KV+   ++RTF  VA++WY G   KW+ +HA  VL  L  ++F+ LG R I EL T
Sbjct  60   KKNDKVEQS-KARTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  151  HDLMQPLEAVTKRGTIDVALRIKNYLQSIMREAKRLRLITTNPAHDLDGSIRAPRVTHRP  210
            +DL+ P+ AV   G ++VA R+++   +IMR A +  LI  NPA+++ G++ +    HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  211  ALPLSRLPELQARIDVYKGRPLTRLTVMLSLHVFVRSSELRFARWNEFDLNRGIWEIPDT  270
            AL L R+PEL ++ID Y GRPLTR +  L+L +F+RSSELRFARW+E+D++ +IW IP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  271  RPALDGVPFSTRGTKMAGDIHVVPLSPQAVGLLEQIHAITGKFDLVFAGDAKPWKPMSEN  330
            R ++ GV  S RG+KM    H+VPLS QA+++L QI  + G  DL+F G+  + KPMSEN
Sbjct  238  REPIPGVKHSHRGSKMRT-THLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  331  TVNAALRTMGYDTKVDICGHGFRAMACSALVESGLWLETAIERQMSHKERNNVRAAYTHK  390
            TVN+ALR MGYDTKV++CGHGFR+MACS+L+ESGLW   A+ERQMSH ERN+VRAAY HK
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  391  AEFLEERRMIMTWWSRFLEANREDHVTPHEFAK  423
            AE LEERR+++ WW+ FL+ANRE  ++P E+AK
Sbjct  357  AEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

282) Dd703_3554 in NC_012880


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  350 bits (1313),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 216/391 (56%), Positives = 302/391 (78%), Gaps = 2/391 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPTVTlaearakrdeakkllVQGIDPka  85
            + L + P GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   eqkeaqaeTAGAYTFETIARQWHASNKRWGDYHRARVMRYLELYIFPHIGTADIRKLKTS  145
             +K+ + E + A TF  +A +W ++NK+W++ H  RV++ LE  +F+ +G  +I  LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKAVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMSGALTTTKARHYPA  205
            +LLAPIKAV+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +M+GA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPPERLHEFLSRLAAYRGRQMTRIAVELTLLTFVRSSELRFAQWREFDFDKAYWRVPAQR  265
            L   R+ E+L+++ +Y GR +TR A ELTLL F+RSSELRFA+W E+DF+ + W +P++R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EAIKGVRYSYRGMKMKEEHIVPLSRQAVALLEQLKAISGDNKCLFPGDHDPEKVMSENTV  325
            E+I GV+ S RG KM+  H+VPLSRQA+A+L Q+K + G +  +F G+HD++K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRAMGYDTQTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYTHTSE  385
            N+ALR MGYDT+ EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAY H +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  YLDERRLMVQWWADYLDANRKETTAPYDYAN  416
             L+ERRLM+QWWAD+LDANR    +P++YA+
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

283) Entas_3110 in NC_015968


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  350 bits (1313),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 202/389 (52%), Positives = 295/389 (76%), Gaps = 4/389 (1%)

Query  29   LYLLVKKNGTKAWRMNYRFNGKQATLALGVFPDVSLALARKRRDEARQLLADGVDPRVSK  88
            + LLV  NG+K WR++YR++GKQ  LALGV+P+++LA AR RRDEAR+LLA+GVDP   K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  89   RAAPTEPSSA-TFQTIALEWHKGSIGHPSWKEITRIKILREMENHIFPFIGNKPIDSLKT  147
            +    E S A TF+ +A+EW      +  W E    ++L+ +E+++F+ +G++ I  LKT
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGT---NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  148  SDLLPLLVRMSDQGIGATTGRVKTTLASVFRYAIQRGIVEYNPTHDLRGAIASPKIKHrp  207
             DLL+ +  +   G    ++R++   +++ RYA+Q G+++YNP++++ GA+AS + +HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  208  alplerlpelISKIDSYTGRPLTKLAVLFSLHTFVRSSELRHARWEEINFETAMWTIPAQ  267
            AL L R+PEL++KIDSYTGRPLT+ A  ++L  F+RSSELR ARW EI+FE+++WTIP++
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  268  RKRIEGVKYSERGAKMGSIHYVPLSNEAIDVLEAIKKISGEYELIFPGDSNPYKPMSENT  327
            R  I GVK S+RG+KM + H VPLS +A+ +L  IK++ G  +LIF G+ ++ KPMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  328  VNKSLRIMGYDTQADICLHGFRAMACSALTESGLWSRDAVERQMSHQERNEVRAAYVHLA  387
            VN +LR+MGYDT+ ++C HGFR+MACS+L ESGLWSRDAVERQMSH ERN VRAAY+H A
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  388  QHMQERRRMMQWWSHYIISNCESYIAPYE  416
            +H++ERR M+QWW++++ +N E  I+P+E
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFE  386

284) Q7S_09690 in NC_017047


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  350 bits (1315),  Expect = 6e-98, Method: Compositional matrix adjust.
 Identities = 202/363 (56%), Positives = 281/363 (78%), Gaps = 1/363 (0%)

Query  1    MGAYPDVSLADARQQRDGIRKLLAQNINPAQLRSAEKATVLPGETFKAVALSWHKSNRSW  60
            +G YP+++LADAR +RD  RKLLA+ ++P++ +  +K     + TFK VA+ W  +N+ W
Sbjct  28   LGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKW  87

Query  61   SDNHAARLLASMNNHIFPIIGHLPATELKTRHFIDLLKGIEQKGLLEVAARTRQHMCNIM  120
            S++HA R+L S+++++F+ +G+   +ELKTR+++  +K++E  G LEVAAR +Q+   IM
Sbjct  88   SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIM  147

Query  121  RHAVHQELIEHNPAANLDGIIAPPVKRHYPAlpleqlpellTRIKDYKQGRELTRLAVSL  180
            R AV+  LI+ NPA ++ G +A+  ++H PAL L ++PELLT+I  Y  GR LTR A  L
Sbjct  148  RYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYT-GRPLTRWATEL  206

Query  181  TLHLFIRSSELRFARWSEIDFKNRIWTIPATRESIPGVRYSGRGAKMRTPHIVPLSGQSI  240
            TL +FIRSSELRFARWSEIDF   IWTIP+ RE+IPGV+ S RG+KMRT H+VPLS Q++
Sbjct  207  TLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQAL  266

Query  241  AILKQIREISGHQVLVFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSAL  300
            AILKQI+++ G + L+F G+H++ KPM ENTVN ALR+MGYDTK E+CGHGFR+MACS+L
Sbjct  267  AILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSL  326

Query  301  MESGLWAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLDMCRKAYVPPYI  360
            +ESGLW++DAVERQMSH ERNSVRAAYIHKAE L+ R+ M+QWW+D+LD  R   ++P+ 
Sbjct  327  IESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFE  386

Query  361  CGK  363
             +K
Sbjct  387  YAK  389

285) intB in NC_021505


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  349 bits (1309),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 203/393 (52%), Positives = 287/393 (74%), Gaps = 4/393 (1%)

Query  31   LYLLVQPNGRKGWRLRYVKPDGREGLTALGSYPVVGLGDARRKRFEIKQQLANGIDPIQY  90
            + LLV+PNG K WRL+Y + +G++ + ALG YP + L+DAR +R E ++ LANG+DP + 
Sbjct  1    MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK  59

Query  91   KQQTKTQAVINGRTFESVALDWYASMVPKWAPGHAKTVLSRLKTHVFPLIGARAIVELDT  150
            K++ K +   ++RTF  VA++WY++   KW+ +HA  VL  L  ++F+ +G R I EL T
Sbjct  60   KKNDKVEQS-KARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  151  HDLMQPLEAVTKRGTIDVALRIKNYLQSIMREAKRLRLITANPAHDLDGSIKTPRVTHRP  210
            +DL+ P+ AV   G ++VA R+++   +IMR A +  LI  NPA+++ G++ +    HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  211  ALPLSRLPGLLACIEDYRGRPLTRLTVMLSLHVFVRSSELRFARWNEFDLKRGIWEIPDT  270
            AL L R+P LL+ I+ Y GRPLTR +  L+L +F+RSSELRFARW+E+D+  +IW IP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  271  RPALDGVPFSTRGTKMAGDIHVVPLSPQAVALLEQIHAITGKFELVFAGDAKPWKPMSEN  330
            R ++ GV  S RG+KM    H+VPLS QA+A+L QI  + G  +L+F G+  + KPMSEN
Sbjct  238  REPIPGVKHSHRGSKMRT-THLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  331  TVNAALRTMGYDTKVDICGHGFRAMACSALVESGLWSETAIERQMSHKERNNVRAAYTHK  390
            TVN+ALR MGYDTKV++CGHGFR+MACS+L+ESGLWS  A+ERQMSH ERN+VRAAY HK
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  391  AEFLEERRMIMTWWSRFLEANREDHVTPHEFAK  423
            AE LEERR+++ WW+ FL+ANRE  ++P E+AK
Sbjct  357  AEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

286) UMNK88_5213 in NC_017641


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  348 bits (1306),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 212/279 (76%), Positives = 246/279 (89%), Gaps = 1/279 (0%)

Query  26   MVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVSLadararrdearKLLANGVDPSENK  85
            M LLVHPNGSKYWRL+YR+ GK+KMLALG YPE++LADAR RRDEARKLLANGVDP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAVKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRD  145
            K  KVEQ + A TF  VA +W ++N+KWS  H+ RVLKSLEDNLF+A+G RNIAELKTRD
Sbjct  61   KNDKVEQSK-ARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  146  LLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQSGLIDYNPAQEIAGAVATAKRQHRAAL  205
            LL PIKAVE SGRLEVAARLQQRTTAIMR+AVQSGLIDYNPAQE+AGAVA+ +RQHR+AL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  206  ELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRSSELHFARWSEVDFETAMWTIPGERE  265
            EL+RIPELL +ID Y+GRPLTR A ELTLL+FIRSSEL+FARWSE+DFE+++WTIP ERE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  QLEGVKHSQRGSKMRTPHLVPLSRQALSILEKIKSMSGN  304
             + GVKHS+RGSKMRT HLVPLSRQAL+IL +IK   G 
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGA  278

287) KPK_1799 in NC_011283


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  348 bits (1307),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 216/390 (56%), Positives = 303/390 (78%), Gaps = 1/390 (0%)

Query  26   LYLLIKPGGSRHWYLKYRINGKESRIALGAYPAISLSDARHQREGIRKMLALNINPAQQR  85
            + LL+ P GS+ W L+YR +GK+  +ALG YP I+L+DAR +R+  RK+LA  ++P++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   AVERGAYTPEKVFKIVALAWHKSNKKWSQNTADRLLASLNNHVFPVIGHLSISELKPRHF  145
              ++   +  + FK VA+ W  +NKKWS++ A+R+L SL++++F+ +G+ +I+ELK R++
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  IDllkgieekglleVASRTRQHLSNIMRHAVHQGLIDSNPAANLDGVTAPPVRRHYPAlp  205
            +  +K++E  G LEVA+R +Q+ + IMR AV+ GLID NPA ++ G  A+  R+H PAL 
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  lerlpellkrIEAYHQGREltrlavlltlhlFIRSSELRFARWSEIDFRNRTWTIPATRE  265
            L R+PELL +I++Y  GR LTR A  LTL +FIRSSELRFARWSEIDF    WTIP+ RE
Sbjct  181  LKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  AIAGVRYSGRGAKMRTAHIVPLSEQAIAILKRIKDISGDGELVFPGDHNPYKPMCENTVN  325
            +I+GV+ S RG+KMRT+H+VPLS QA+AILK+IK++ G  +L+F G+H++ KPM ENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRLMGYDTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNSVRAAYIHKAEY  385
             ALR+MGYDTK ++CGHGFR+MACS+L+ESGLWS+DAVERQMSH ERNSVRAAYIHKAE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  386  LDARKAMMQWWSDYLAMNRKVFISPYLFEK  415
            L+ R+ M+QWW+D+L  NR   ISP+ + K
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

288) PC1_0501 in NC_012917


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  347 bits (1304),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 215/390 (56%), Positives = 304/390 (78%), Gaps = 1/390 (0%)

Query  25   LYLTVSPSGAKLWYFRYRFGGKENRLAFGPYPQITlaearekrdaarkllaSGLSPSQLR  84
            + L V P+G+K W ++YR+ GK++ LA+G YP+ITLA+AR +RD ARKLLA+G+ P++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KSNNPAVEESRTFQYVAMTWHTSSLKLWSEAHADKILTCLKRYVFPAIGSMDIAQVETRH  144
            K+++     +RTF+ VA+ W  ++ K WSE HA+++L  L   +F+A+G  +IA++ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVVTQHHPAl  204
            L   +KA++  G  +VA+R++Q+ T IMR AVQ G+I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  plkrlpellekIENYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             LKR+PELL KI++Y GR LTR A EL L +F+RSSELRFARW E+++ A IW++P++RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAYSGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+ S+RG+KM+  HLVPLSRQA+A+LKQI+ + G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEICGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK E+CGHGFRTMACS+L ESG WS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

289) plu4460 in NC_005126


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  347 bits (1304),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 209/391 (54%), Positives = 301/391 (77%), Gaps = 2/391 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPTDKKEDRLAFGVYPVISLADARAKRNEAKKLIANGIDPKA  85
            + L + P GSKYWR++YR   + K+  LA+GVYP I+LADAR +R+EA+KL+ANG+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   TQKETQAEASGEFNFETIARKWHSSNKRWGDYNRARVLRSLEQYIFPHIGKIDIRQLKTR  145
             +K+ + E S    F  +A  W ++NK+W++ +  RVL+SLE+ +F+ +G  +I +LKTR
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  ELLVPIkavddadkvdvakRLQQCVTAIMRYAVQCGIIESNPALDMAGALSTTKTEHHpa  205
            +LL PIKAV+ +++++VA RLQQ  TAIMRYAVQ G+I+ NPA +MAGA+++ + +H+PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  lppsrlpellerTALFKGREVTRIAIEFGLLTFVRASKLRFVRWDEFDFDNAIWEIPGKR  265
            L   R+PELL +   + GR +TR A E+ LL F+R+S LRF RW E+DF+ +IW IP  R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EAIENVKFSERGMKMKTPHIVPLSSQAMALLEKLKEYSGDNRCLFPGDRDPNKVMSENTV  325
            E+I  VK S+RG KM+T H+VPLS QA+A+L ++K++ G +  +F G++D++K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NKALRVMGYDIKTEICYHGFRTMARGAMGESGIWADDVIERQLSHLERNNVKAAYLHTSH  385
            N ALRVMGYD K E+C HGFRTMA +++ ESG+W+ D +ERQ+SH+ERN+V+AAY+H ++
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  HLDECRLMLQWWADYLDANRQGFISPYDYAQ  416
            HL+E RLMLQWWAD+LDANR+  ISP++YA+
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAK  389

290) Dd1591_3717 in NC_012912


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  347 bits (1302),  Expect = 7e-97, Method: Compositional matrix adjust.
 Identities = 215/393 (55%), Positives = 305/393 (78%), Gaps = 2/393 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPTVTlaearakrdeakkllVQGIDPka  85
            + L + P GSKYWR++YR   + K+  LA+GV P +TLA+AR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   eqkeaqaeTAGAYTFETIARQWHASNKRWGDYHRARVMRYLELYIFPHIGTADIRKLKTS  145
             +K+ + E + A TF  +A +W ++NK+W++ H  RV++ LE  +F+ +G  +I  LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKAVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMSGALTTTKARHYPA  205
            +LLAPIKAV+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +M+GA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPPERLHEFLSRLAAYRGRQMTRIAVELTLLTFVRSSELRFAQWREFDFDKAYWRVPAQR  265
            L   R+ E+L+++ +Y GR +TR A ELTLL F+RSSELRFA+W E+DF+ + W +P++R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EAIKGVRYSYRGMKMKEEHIVPLSRQAVALLEQLKAISGDNKCLFPGDHDPEKVMSENTV  325
            E+I GV+ S RG KM+  H+VPLSRQA+A+L Q+K + G +  +F G+HD++K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRAMGYDTQTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYTHTSE  385
            N+ALR MGYDT+ EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAY H +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  YLDERRLMVQWWADYLDANREWYVTAYDFGKLT  418
             L+ERRLM+QWWAD+LDANRE  +++++++K+ 
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKIN  391

291) Dda3937_01301 in NC_014500


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  344 bits (1292),  Expect = 5e-96, Method: Compositional matrix adjust.
 Identities = 213/394 (55%), Positives = 303/394 (77%), Gaps = 2/394 (0%)

Query  26   LYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPTVTladarakrdeakkllVQGIDPka  85
            + L + P GSKYWR++YR   + K+  LA+GV P +TLADAR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   eqkeaqaeTAGAYTFETIARQWHASNKRWGDYHRARVMRYLELYIFPHIGTADIRKLKTS  145
             +K+ + E + A TF  +A +W ++NK+W++ H  RV++ LE  +F+ +G  +I  LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  HLLAPIKAVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMSGALTTTKARHYPA  205
            +LLAPIKAV+ SG+ +VA RLQQR TAIMRYAVQ++ ID NPA +M+GA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  LPPERLHEFLSRLAAYRGRQMTRIAVELTLLTFVRSSELRFAQWHEFDFDKAYWRVPAQR  265
            L   R+ E+L+++ +Y GR +TR A ELTLL F+RSSELRFA+W E+DF+ + W +P++R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  266  EAIKGVRYSYRGMKMKEEHIVPLSRQAVALLEQLKAISGDNKCLFPGDHDPEKVMSENTV  325
            E+I GV+ S RG KM+  H+VPLSRQA+A+L Q+K + G +  +F G+HD++K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  326  NNALRAMGYDTQTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYTHTSE  385
            N+ALR MGYDT+ EVCGHGFRTMA ++L ESGLWS DA+ERQ+SH ERN+VRAAY H +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  386  YLDERRLMVQWWADYLEVLKREYITSYDFAKMSG  419
             L+ERRLM+QWWAD+L+  +   I+++++AK++ 
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

292) Dd703_3412 in NC_012880


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  341 bits (1279),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 302/390 (78%), Gaps = 1/390 (0%)

Query  25   LYLTVSPSGAKLWYFRYRFGGKENRLAFGPYPQTTlaearekrdaarkllaSGISPSQLR  84
            + L V P+G+K W ++YR+ GK++ LA+G YP+ TLA+AR +RD ARKLLA+G+ P++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KTNNLAADESRTFQYLAQTWHTSSLKLWSEAHADKILTCLKRYVFPAIGAMDIAQVETRH  144
            K +++    +RTF+ +A  W  ++ K WSE HA+++L  L   +F+A+G  +IA++ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVATQHHPAl  204
            L   +KA++  G  +VA+R++Q+ T IMR AVQ G+I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  plkrlpellekMENYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHLWSVPAQRE  264
             LKR+PELL K+++Y GR LTR A EL L +F+RSSELRFARW E+++ A +W++P++RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVDGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+ S+RG+KM+  HLVPLSRQA+A+LKQI+ + G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKSEVCGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK EVCGHGFRTMACS+L ESG WS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

293) Dd1591_3537 in NC_012912


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  341 bits (1280),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 212/390 (55%), Positives = 299/390 (77%), Gaps = 1/390 (0%)

Query  25   LYLTVSPSGAKLWYFRYRFGGKESRLAFGPYPQTTlaearekrdaarkllaSGISPSQLR  84
            + L V P+G+K W ++YR+ GK+  LA+G YP+ TLA+AR +RD ARKLLA+G+ P++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KANNPAVDESRTFQYVAQAWHTSSLKLWSDAHADKILTCLKRYVFPTIGAMDISQVETRH  144
            K ++     +RTF+ VA  W  ++ K WS+ HA+++L  L   +F+++G  +I+++ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTLVVTQHHPAl  204
            L   +KA++  G  +VA+R++Q+ T IMR AVQ G+I YNPA ++ G V+    QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  plkrlpellekIESYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             LKR+PELL KI+SY GR LTR A EL L +F+RSSELRFARW E+++ A IW++P++RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQALSGESVFVFPGAHTLNKPMSENTIN  324
            ++ GV+ S+RG+KM+  HLVPLSRQA+A+LKQI+ + G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKTEICGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK E+CGHGFRTMACS+L ESG WS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

294) Dda3937_02713 in NC_014500


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  341 bits (1279),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 210/390 (54%), Positives = 301/390 (78%), Gaps = 1/390 (0%)

Query  25   LYLTVSTSGAKLWYFRYRFGGKENRLAFGPYPQTTlaearekrdaarkllaSGISPSQLR  84
            + L V  +G+K W ++YR+ GK++ LA+G YP+ TLA+AR +RD ARKLLA+G+ P++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KTNNPAVDESHTFQSVTMAWHTSSLKLWSDAHADKILICLKRYVFPAIGAMDIAQVETRH  144
            K ++     ++TF+ V++ W  ++ K WS+ HA+++L  L   +F+A+G  +IA++ TR+
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LAQLVKSIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVATQHHPAl  204
            L   +K+++  G  +VA+R++Q+ T IMR AVQ G+I YNPA ++ G V++   QH+PAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  205  plkrlpellekIESYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE  264
             LKR+PELL KI+SY GR LTR A EL L +F+RSSELRFARW E+++ A IW++P++RE
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  265  AVNDVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGKSVFVFPGAHTLNKPMSENTIN  324
            ++ +V+ S+RG+KM+  HLVPLSRQA+A+LKQI+ + G   ++F G H  +KPMSENT+N
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  325  KALRVIGYDTKSEVCGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH  384
             ALRV+GYDTK EVCGHGFRTMACS+L ESG WS+DA+ERQMSH ERN+VRAAY+HKAEH
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  385  LEARIEMMQWWSDYLDVNREGYVAPYIYAR  414
            LE R  M+QWW+D+LD NRE  ++P+ YA+
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

295) Pfl01_3064 in NC_007492


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  341 bits (1279),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 198/393 (51%), Positives = 287/393 (74%), Gaps = 4/393 (1%)

Query  31   LYLLIQPNGRKGWRLRYVKPDGREGLTSLGSYPVIGLAEARQKRLDAKRMLADGIDPVES  90
            + LL++PNG K WRL+Y + +G++ + +LG YP I LA+AR +R +A+++LA+G+DP + 
Sbjct  1    MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK  59

Query  91   KRKAKTEDAVNGRTFESVALDWHKNMSARWTLDHSKNVFNRLNNYVFPFIGARAIADLDT  150
            K++ K E++ ++RTF  VA++W    + +W+ DH+  V++ L++ +F+ +G R IA+L T
Sbjct  60   KKNDKVEQS-KARTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  151  YDLMQPLEAIRKRGTIDVALRVQRYLQSIMREAKRLRLIPMNPAYDLQGLIKAPRVSHRP  210
             DL+ P+ A+   G ++VA R+Q+   +IMR A +  LI  NPA ++ G + +    HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  211  TLPLSRLPELLARIYAYKGRELTRLTLMLSLHVFVRSSELRFARWCEFDLKRCVWEIPDT  270
            +L L R+PELL++I +Y GR LTR +  L+L +F+RSSELRFARW E+D+   +W IP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  271  RPELEDVRHSTRGTKMAGDVHLVPLSPQVVAVLEQIHTLTGAFDLVFAGDARAWKPMSEN  330
            R  + +V+HS RG+KM    HLVPLS Q +A+L QI  + GA DL+F G+  + KPMSEN
Sbjct  238  REPIPGVKHSHRGSKMRT-THLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  331  TVNKALRTMGYDTKTEICGHGFRSMACSALIESGLWSETAIERQMSHRERNSVRAAYIHK  390
            TVN ALR MGYDTK E+CGHGFR+MACS+LIESGLWS  A+ERQMSH ERNSVRAAYIHK
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  391  AEFIEERRLIMNWWSRYLAANLQEHVTPHEFAN  423
            AE +EERRL+++WW+ +L AN +  ++P E+A+
Sbjct  357  AEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

296) KPN2242_20085 in NC_017540


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  332 bits (1245),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 183/286 (64%), Positives = 241/286 (85%), Gaps = 0/286 (0%)

Query  2    AGNIRWTEAHAAKALRSLELHVFPLIGKIPVADLKTADLLIPLRVAERKGNLETAARLQQ  61
            + N +W+E HA + L+SLE ++F+ +G   +A+LKT DLL P++  E  G LE AARLQQ
Sbjct  82   GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQ  141

Query  62   RITAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALPLEKMPELLECFESYSGRLLTR  121
            R TAIMRYAVQ +LI  NPA++++GA+A+  ++H PAL L ++PELL  ++SY+GR LTR
Sbjct  142  RTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTR  201

Query  122  LAVQLNLLIFIHSSELRFARWTEIDLDGAMWTIPAEREPIPGVRYSERGAKMKTPHLVPL  181
             A +L LLIFI+SSELRFARW+EID+++++WTIP+EREPIPGV+ S+RG+KM+T HLVPL
Sbjct  202  WATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPL  261

Query  182  SKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKVDVCGHGFRTM  241
            S+QA+++LKQ+K + G  +L+F G+HD++KPMSENT+N ALRVMGYDTKV+VCGHGFRTM
Sbjct  262  SRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTM  321

Query  242  ACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMM  287
            ACS+LIESG WS+DAVERQMSH ERN+VRAAYIHKAEHL+ER  M+
Sbjct  322  ACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLML  367

297) SSON53_18230 in NC_016822


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  331 bits (1241),  Expect = 3e-92, Method: Compositional matrix adjust.
 Identities = 176/301 (59%), Positives = 250/301 (84%), Gaps = 0/301 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSNKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNA  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SEN +N+
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  S  326
            +
Sbjct  301  A  301

298) int in NC_009648


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  330 bits (1238),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 182/286 (64%), Positives = 241/286 (85%), Gaps = 0/286 (0%)

Query  2    AGNIRWTEAHAAKALRSLELHVFPLIGKIPVADLKTADLLIPLRVAERKGNLETAARLQQ  61
            + N +W+E HA + L+SLE ++F+ +G   +A+LKT DLL P++  E  G LE AARLQQ
Sbjct  82   GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQ  141

Query  62   RITAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALPLEKMPELLECFESYSGRLLTR  121
            R TAIMRYAVQ +LI  NPA++++GA+A+  ++H PAL L ++PELL  ++SY+GR LTR
Sbjct  142  RTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTR  201

Query  122  LAVQLNLLIFIHSSELRFARWTEIDLDGAMWTIPAEREPIPGVRYSERGAKVKTPHLVPL  181
             A +L LLIFI+SSELRFARW+EID+++++WTIP+EREPIPGV+ S+RG+K++T HLVPL
Sbjct  202  WATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPL  261

Query  182  SKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKVDVCGHGFRTM  241
            S+QA+++LKQ+K + G  +L+F G+HD++KPMSENT+N ALRVMGYDTKV+VCGHGFRTM
Sbjct  262  SRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTM  321

Query  242  ACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMM  287
            ACS+LIESG WS+DAVERQMSH ERN+VRAAYIHKAEHL+ER  M+
Sbjct  322  ACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLML  367

299) SbBS512_E4662 in NC_010658


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  330 bits (1240),  Expect = 4e-92, Method: Compositional matrix adjust.
 Identities = 176/301 (59%), Positives = 250/301 (84%), Gaps = 0/301 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRATEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+P+T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNA  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SEN +N+
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  S  326
            +
Sbjct  301  A  301

300) SBOV45841 in NC_022241


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  330 bits (1239),  Expect = 6e-92, Method: Compositional matrix adjust.
 Identities = 188/334 (57%), Positives = 266/334 (80%), Gaps = 1/334 (0%)

Query  26   LYLLVNPNGSKRWYIKYRFVNKEKKLALGPYPLLTLAQARRMREEAQLLLISGIDPSAHR  85
            + LLV+PNGSK W ++YR+  K+K LALG YP +TLA+AR  R+EA+ LL +G+DP+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAERLAITPEHTFESVAREWVISNVNWSAEHKKRVLRYFELYVFPTNGSCDITKMKVKDL  145
            K +++  +  +TF  VA EW  +N +WS +H  RVL+ +E  +F++ G  +I+ +K +DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LVPIKEVEKAGKLDVASRLQQRTACVMRYAVQNGIIDHNPASDLTGAVSTPKVRHHPALD  205
            L PIK VE +G+L+VA+RLQQRT+ +MRYAVQ+G+ID NPA +++GAV++ + +H+PAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LNLIPDFLDRIDDYKGRqltqlavklalllFIRSSELRFARWDEIDLRNAMWTIPAEREP  265
            L+ IP++L +ID Y GR LT+ A  L+LL+FIRSSELRFARW EID+  ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  IPGVKYSARGAKMHSPHLVPLSRQAIELLHEVRQHCRPGTELVFPGDHNYRKPMSENTIN  325
            IPGVK S RG+KM++ HLVPLSRQA+ +L +++Q C  + +L+F G+H+ +KPMSENT+N
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC-GAHDLIFIGNHDSHKPMSENTVN  299

Query  326  KALRVMGYDTQKDVCGHGFRTMACSALVESGLWS  359
             ALRVMGYDT+ +VCGHGFRTMACS+L+ESGLWS
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWS  333

301) intB in NC_021505


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  330 bits (1238),  Expect = 9e-92, Method: Compositional matrix adjust.
 Identities = 197/392 (51%), Positives = 281/392 (72%), Gaps = 4/392 (1%)

Query  31   MYLYVAPCGSKTWRLRYFKPNGKEGTLIIGKYPIVSLAVARIKRDEAKALLLDNLDPMEE  90
            M L V P GSK WRL+Y + +GK+  L +G YP ++LA AR++RDEA+ LL + +DP + 
Sbjct  1    MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK  59

Query  91   KQKAKIAAQRASLLFETVALEWHVEMSRRWTEGHAKTVLSRLRAHVFPLIGQRPIAELDT  150
            K++ K+   +A   F  VA+EW    +++W+E+HA  VL  L  ++F+ +G+R IAEL T
Sbjct  60   KKNDKVEQSKART-FKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  151  HDLLEVTQRIKDRGTMDVALRVQNYLSTIMRGAKRARQITQNPALDLAGSIQAPRTVHRP  210
            +DLL   + +   G ++VA R+Q+  ++IMR A ++  I  NPA ++AG++ +    HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  211  ALSLNRLPELLDRIDNYTGRELTRLAVLLTLHVFVRSSELRFARWDEFDLQRAMWEIPDT  270
            AL L+R+PELL +ID+YTGR LTR A  LTL +F+RSSELRFARW E+D++ ++W IP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  271  RKPIEGVRYSTRGTKMSGDIQIVPLSPQVIEILERLRSLNRFSELVLPGDHRYWKPLSEN  330
            R PI GV+ S RG+KM    ++VPLS Q + IL +++ +    +L++ G+H   KP+SEN
Sbjct  238  REPIPGVKHSHRGSKMRT-THLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  331  TVNQVLRNMGYDTTKDVCGHGFRTMACSALLESGLWTDAAIERQMSHQERNRVRAAYIHK  390
            TVN  LR MGYDT  +VCGHGFRTMACS+L+ESGLW+  A+ERQMSH ERN VRAAYIHK
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  391  AQFLEQRRLIMAWWSNYIDANRSGRITPHEFA  422
            A+ LE+RRL++ WW++++DANR   I+P E+A
Sbjct  357  AEHLEERRLMLQWWADFLDANREKGISPFEYA  388

302) SBO_4322 in NC_007613


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  329 bits (1233),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 175/301 (59%), Positives = 249/301 (83%), Gaps = 0/301 (0%)

Query  26   MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  85
            M LLVHPNGS+YWRL+YR  GK+K LALGVYPE++L++AR +RDEARKL+++GVDP ++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL  145
            +  KV      +F ++A  W ++NK+W++ H+++VLKSLE ++F+ +G+R+I+ L+T DL
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  146  LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD  205
            L P++A E     E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+++ +RQHRPAL+
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE  180

Query  206  LSRLPELLSRIGSYKGQTVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREP  265
            L R+PELL++I+SY G+ +T+ A  L LL+FIRSSELR+ARWSEID++ ++WTIP+EREP
Sbjct  181  LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  266  LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNA  325
            +PGVK SHRGSKMRT HLVPLS+QA+AIL +++   G ++LIF G HD++KP+SEN +N+
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNS  300

Query  326  S  326
            +
Sbjct  301  A  301

303) PCC21_004050 in NC_018525


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  327 bits (1227),  Expect = 6e-91, Method: Compositional matrix adjust.
 Identities = 212/394 (54%), Positives = 294/394 (75%), Gaps = 6/394 (1%)

Query  26   LYLEITTRGSKYWRMKYRRPIDKKEDRLAFGVWPTVTladarakrdeakkllVQGIDPKA  85
            + L +   GSKYWR++YR   + K+  LA+GV P +TLADAR +RDEA+KLL +G+DP  
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   EQKEVQAESEGAYTFETVARQ----QQALGDYHRSRVIRYLEMYISPEIGASDIRKLKTS  141
             +K+ + E   A TF  VA +    ++  ++ H  RV++ LE  + + +G  +I  LKT 
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  142  HLLAPIKAVDASGKHDVAQRLQQRITAIMRYAVQNDYIESNPAGDMAGALTTTKARHYPA  201
            +LLAPIKAV+ SG+ +VA RLQQR TAIMRYAVQ++ I+ NPA +MAGA+++ + +H PA
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  202  LPSVRFPEFLSRLAAYRGRLLTRCAVELMLLTFVRSSELRFAQWREFDFDSAEWRIPAQR  261
            L   R+PE+L+++ +Y GR LTR A EL LL F+RSSELRFA+W E+DF+++ W IP++R
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  262  EEIEGVRYSYRGMKMKEEHVVPLSNQALAVLAKLHALSGDNPRLFPSDHNPEKVMSENTV  321
            E I GV+ S RG KM+  H+VPLS QALA+L ++  + G +  +F ++H+++K MSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  322  NSALRTMGYDTKTEVCGHGFRTIARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE  381
            NSALR MGYDTK EVCGHGFRT+A ++L ESGLWS DA+ERQ+SH ERN+VRAAYIH +E
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  382  YLDERRLMVQWWADYLDIIQYEHITPYEYARVRN  415
             L+ERRLM+QWWAD+LD  +   I+P+EYA++ N
Sbjct  359  HLEERRLMLQWWADFLDANREKGISPFEYAKINN  392

304) EC042_2207 in NC_017626


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  321 bits (1205),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 186/342 (55%), Positives = 264/342 (78%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +LA  ++P +++   +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++   K++E  G LEVA+R +Q+ + I+R AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PAL L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV  S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
            +VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  348  SVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

305) ETEC_2075 in NC_017633


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  321 bits (1205),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 185/342 (55%), Positives = 264/342 (78%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +LA  ++P +++   +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++   K++E  G LEVA+R +Q+ + I+R AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PAL L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV  S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDTVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++D+VERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
            +VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  348  SVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

306) ECABU_c22350 in NC_017631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  315 bits (1180),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 187/342 (55%), Positives = 266/342 (78%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +LA  ++P +++   +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PAL L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
            +VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  348  SVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

307) LF82_294 in NC_011993


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  315 bits (1180),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 187/342 (55%), Positives = 266/342 (78%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +LA  ++P +++   +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PAL L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
            +VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  348  SVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

308) BJAB0715_03144 in NC_021733


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  313 bits (1172),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 184/393 (47%), Positives = 277/393 (71%), Gaps = 5/393 (1%)

Query  46   LILFIRKSGSKVWRFKYKRANGKDGLMTLGNFPALSLKAARDKRRELETLLANGIDPIEY  105
            + L+++ +GSK WR++Y R +GK+ +++LG +P ++L  AR +R E   LLANG+DP + 
Sbjct  1    MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK  59

Query  106  SEIQKAKLDNKYNFESIAREWHTAYKNTGRWGTETAERALKNMEEYVFPKLGKKPIDAIK  165
               +K    +   F  +A EW   Y    +W+ + A+R LK++E+ +F+ LG + I  +K
Sbjct  60   KKNDKVEQSKARTFKEVAIEW---YGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  166  PKELIQVIKSIEDLGYTEVVKKTRQRLTSIFAFAMSKGFIESNPAYGLQDIFILSKKTKH  225
             ++L+  IK++E  G  EV  + +QR T+I  +A+  G+I+ NPA  + +     ++ +H
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QH  175

Query  226  HpqlplerlpelqAKLASDTGHPLTRLCVEFALHTFARSSEIRFARWKEFDFENAIWTIP  285
            +P L L R+PEL +K+ S TG+PLTR   E++L  F RSSE+RFARW E+DFE +IWTIP
Sbjct  176  RPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  286  PTRDFVEGYKYSHRGAKMKAPHLIPLSNQALAIIKEIFKYSGHTQNVFPKNGDPHGFMSE  345
            P R+ + G K SHRG+KM++ HL+PLS QALAI+K+I ++ G  + +F  N D+H  MSE
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  346  STINKTLRRLGYDTNIEVCGHGFRGMACAALIQSKLFQKDAVEKQMSHQERNNVRLAYTH  405
            +T+N +LR +GYDT++EVCGHGFR MAC++LI+S L  +DAVE+QMSH ERN+VR AY H
Sbjct  296  NTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIH  355

Query  406  KAEFLEERKTMLNWWSSYLDATKETSISPYDYT  438
            KAE LEER+ ML+WW+ +LDA +E +ISP++Y+
Sbjct  356  KAEHLEERRLMLQWWADFLDANREKGISPFEYA  388

309) ECP_1936 in NC_008253


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  313 bits (1174),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 185/342 (55%), Positives = 265/342 (78%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG  60
            +LA  ++P +++  ++  ++  + FK+VA+ W  +N+KWS++ A+R+  SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPApplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PA  L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
            +VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  348  SVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

310) c2418 in NC_004431


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  313 bits (1174),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 185/342 (55%), Positives = 265/342 (78%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG  60
            +LA  ++P +++  ++  ++  + FK+VA+ W  +N+KWS++ A+R+  SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPApplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PA  L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
            +VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  348  SVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

311) i14_2235 in NC_017652


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  313 bits (1174),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 185/342 (55%), Positives = 265/342 (78%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG  60
            +LA  ++P +++  ++  ++  + FK+VA+ W  +N+KWS++ A+R+  SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPApplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PA  L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
            +VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  348  SVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

312) i02_2235 in NC_017651


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  313 bits (1174),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 185/342 (55%), Positives = 265/342 (78%), Gaps = 1/342 (0%)

Query  1    MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG  60
            +LA  ++P +++  ++  ++  + FK+VA+ W  +N+KWS++ A+R+  SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDllkgieekglleVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++  +K++E  G LEVA+R +Q+ + IMR AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPApplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PA  L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV+ S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGK  342
            +VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+  +K
Sbjct  348  SVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

313) ECSF_1824 in NC_013654


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  308 bits (1153),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 180/315 (58%), Positives = 250/315 (80%), Gaps = 1/315 (0%)

Query  1    MALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHFIDLLKGIEEKDLLEV  60
            +A+ W  +N+KWS++ A+R+L SL++++F+ +G+  ++ELK R+++  +K++E  + LEV
Sbjct  76   VAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEV  135

Query  61   ASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIGAYH  120
            A+R +Q+ + IMR AV+  LID NPA +++G  ++  R+H PAL L R+PELL +I++Y 
Sbjct  136  AARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSY-  194

Query  121  QGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMR  180
             GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ REPI GV+ S RG+KMR
Sbjct  195  TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMR  254

Query  181  MPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDIC  240
              H+VPLS Q++AILKQIK++ G ++LIF G+H++ KPM ENTVN ALRVMGYDTK ++C
Sbjct  255  TTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNSALRVMGYDTKVEVC  314

Query  241  GHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKTMMQWWSDYL  300
            GHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEHLE R+ M+QWW+D+L
Sbjct  315  GHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFL  374

Query  301  EACRESYAPPYTIGK  315
            +A RE   +P+  +K
Sbjct  375  DANREKGISPFEYAK  389

314) PSF113_0326 in NC_016830


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  307 bits (1149),  Expect = 7e-85, Method: Compositional matrix adjust.
 Identities = 178/344 (52%), Positives = 247/344 (72%), Gaps = 3/344 (0%)

Query  1    MLADGVDPIETKHQAKAEAVIKGRTFESVALDWHTEMSAKWAPGHSKTVMSRLKTHVFPL  60
            +LA+GVDP + K + K E   K+RTF  VA++W    + KW+ +H+  V+  L  ++F+ 
Sbjct  49   LLANGVDPGDKKKNDKVEQS-KARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAA  106

Query  61   IGASAIVDLDTHDLMQPLEAIKKRGTIDVALRVQNYLQSIMREAKRLRLITANPAYDLEG  120
            +G   I +L T+DL+ P+ A+   G ++VA R+Q+   +IMR A +  LI  NPA ++ G
Sbjct  107  LGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG  166

Query  121  LIKAPRVVHRPALPLSRLPELQERIDTYKGRALTRLTVMLSLHVFVRSSELRFARWSEFD  180
             + +    HRPAL L R+PEL  +ID+Y GR+LTR +  L+L +F+RSSELRFARWSE+D
Sbjct  167  AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEID  226

Query  181  LKRGTWEIPDTRPALEGVPFSTRGTKMAGDIHLVPLSPQAVALLEQIHALTGKFDLVFAG  240
            +  + W IP  R ++ GV  S RG+KM    HLVPLS QA+A+L QI  + G  DL+F G
Sbjct  227  FEASIWTIPPEREPIPGVKHSHRGSKMRT-THLVPLSRQALAILKQIKQFCGAHDLIFIG  285

Query  241  DAKPWKPMSENTVNNALRTMGYDTKTDICGHGFRSMACSALIESGLWSETAIERQMSHKE  300
            +  + KPMSENTVN+ALR MGYDTK ++CGHGFR+MACS+LIESGLWS  A+ERQMSH E
Sbjct  286  NHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHME  345

Query  301  RNNVRAAYIHKAEFIEERRLIMNWWSRYLEANREEHVTPHEFAN  344
            RN+VRAAYIHKAE +EERRL+++WW+ +L+ANRE  ++P E+A+
Sbjct  346  RNSVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAK  389

315) APECO1_1051 in NC_008563


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  301 bits (1128),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 176/320 (55%), Positives = 248/320 (78%), Gaps = 1/320 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +LA  ++P +++   +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++   K++E  G LEVA+R +Q+ + I+R AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PAL L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV  S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMM  320
            +VR AYIHKAEHLE R+ M+
Sbjct  348  SVRAAYIHKAEHLEERRLML  367

316) intA_2 in NC_022370


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  301 bits (1128),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 176/320 (55%), Positives = 248/320 (78%), Gaps = 1/320 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +LA  ++P +++   +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++   K++E  G LEVA+R +Q+ + I+R AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PAL L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV  S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMM  320
            +VR AYIHKAEHLE R+ M+
Sbjct  348  SVRAAYIHKAEHLEERRLML  367

317) UM146_07320 in NC_017632


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  301 bits (1128),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 176/320 (55%), Positives = 248/320 (78%), Gaps = 1/320 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +LA  ++P +++   +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++   K++E  G LEVA+R +Q+ + I+R AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PAL L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV  S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMM  320
            +VR AYIHKAEHLE R+ M+
Sbjct  348  SVRAAYIHKAEHLEERRLML  367

318) UTI89_C2177 in NC_007946


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  301 bits (1128),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 176/320 (55%), Positives = 248/320 (78%), Gaps = 1/320 (0%)

Query  1    MLALNINPVQQRAAVRGSRTPEKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIG  60
            +LA  ++P +++   +  ++  + FK+VA+ W  +N+KWS++ A+R+L SL++++F+ +G
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALG  108

Query  61   NLPVSELKPRHFIDLQKGIEEKGLLEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVT  120
            +  ++ELK R+++   K++E  G LEVA+R +Q+ + I+R AV+  LID NPA +++G  
Sbjct  109  ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV  168

Query  121  TPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDF  180
            ++  R+H PAL L R+PELL +I++Y  GR LTR A  L L +FIRSSELRFARWSEIDF
Sbjct  169  ASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWATELTLLIFIRSSELRFARWSEIDF  227

Query  181  TNRVWTIPATREPIIGVHYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH  240
               +WTIP+ REPI GV  S RG+KMR  H+VPLS Q++AILKQIK++ G ++LIF G+H
Sbjct  228  EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNH  287

Query  241  NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERN  300
            ++ KPM ENTVN ALRVMGYDTK ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN
Sbjct  288  DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERN  347

Query  301  TVRMAYIHKAEHLEARKAMM  320
            +VR AYIHKAEHLE R+ M+
Sbjct  348  SVRAAYIHKAEHLEERRLML  367

319) ECABU_c41260 in NC_017631


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 156/389 (41%), Positives = 261/389 (68%), Gaps = 26/389 (6%)

Query  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+    +   TF  VA EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q ++++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEKGFNSAW----IETQLAHVDKNAIRGTYN  367
            VN  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIGSLTRENVI  395
            H A+ L+ RR M+QW AD++++  RE+ I
Sbjct  355  HKAEHLEERRLMLQWWADFLDA-NREKGI  382

320) intC in NC_017652


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 156/389 (41%), Positives = 261/389 (68%), Gaps = 26/389 (6%)

Query  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+    +   TF  VA EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q ++++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEKGFNSAW----IETQLAHVDKNAIRGTYN  367
            VN  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIGSLTRENVI  395
            H A+ L+ RR M+QW AD++++  RE+ I
Sbjct  355  HKAEHLEERRLMLQWWADFLDA-NREKGI  382

321) intC in NC_017651


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 156/389 (41%), Positives = 261/389 (68%), Gaps = 26/389 (6%)

Query  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+    +   TF  VA EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q ++++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEKGFNSAW----IETQLAHVDKNAIRGTYN  367
            VN  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIGSLTRENVI  395
            H A+ L+ RR M+QW AD++++  RE+ I
Sbjct  355  HKAEHLEERRLMLQWWADFLDA-NREKGI  382

322) ECD_03516 in NC_012971


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

323) ybl160 in NC_012892


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

324) ECBD_0066 in NC_012947


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

325) ECB_03516 in NC_012967


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

326) intC in NC_004431


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

327) O3M_00580 in NC_018650


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

328) O3O_25120 in NC_018661


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

329) O3K_00550 in NC_018658


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

330) YPK_3149 in NC_010465


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  277 bits (1036),  Expect = 7e-76, Method: Compositional matrix adjust.
 Identities = 157/389 (41%), Positives = 261/389 (68%), Gaps = 25/389 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEISLSEARQRRDEAKRQVANAIDPSEQK  85
            MHL+VHPNGSKYWRLQYR++GKQKMLALG+YPEI+L++AR RRDEA++ +AN++DP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KVEKQARKATVENTFKAIALEWHEYKRPNWSKGYAEDIMEAFENDIFPDIGKRPIAEIKP  145
            K +K  +  +   TFK +A+EW   ++ +WS + A+ ++ ++E+++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIVTGRAESNPASELASALTPPKSVHYP  205
             ++L++++ +E  G L+   +++Q    + RYA+ +G  + NPA E+A+A+++ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLLADELPAFLEALAAYSGSPITRLATKILMLTGVRTIELRMAEWKEFDFDQRVWEVPVQ  265
             L    +P +L  + +Y+G P+TR AT + +L  +R+ ELR A W E+DF+  +W +P +
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHLVPLSDQVVTALREIQAVTGRYNLVFPGRNDITKPMSEAS  313
            R             KMR  HLVPLS Q ++ L++I+   G  +L+F G +D  KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVLKRIGYHGK--ATGHGFRHTMSTILHEQGYNTAW----IELQLAHVDKNTIRGTYN  367
            +N  L+ +GY+ K    GHGFR    + L E G    W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLEQRREMLQWYGEYVDGLAARGIA  395
            H A+ LE+RR MLQW ++++D+   +GI+
Sbjct  355  HKAEHLEERRLMLQWWADFLDANREKGIS  383

331) ECIAI39_4188 in NC_011750


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  276 bits (1033),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQISLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

332) CE10_4227 in NC_017646


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  276 bits (1033),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQISLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

333) M621_05660 in NC_021659


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  276 bits (1034),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 160/395 (41%), Positives = 264/395 (67%), Gaps = 26/395 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEISLSEARQRRDEAKRQVANAIDPSEQK  85
            MHL+VHPNGSKYWRLQYR++GKQKMLALG+YPEI+L++AR RRDEA++ +AN++DP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KVEKQARKATVENTFKAIALEWHEYKRPNWSKGYAEDIMEAFENDIFPDIGKRPIAEIKP  145
            K +K  +  +   TFK +A+EW   ++ +WS + A+ ++ ++E+++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIVTGRAETNPASELASALTPPKSVHYP  205
             ++L++++ +E  G L+   +++Q    + RYA+ +G  + NPA E+A+A+++ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLLADDFPAFLQALATYSGSPITRLATKILMLTGVRTIELRMAEWKEFDFEKRVWEVPVE  265
             L    +P +L  + +Y+G P+TR AT + +L  +R+ ELR A W E+DFE  +W +P E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHLVPLSDQVVSSLREIQVVTGRYNLVFPGRNDITKPMSEAS  313
            R             KMR  HLVPLS Q ++ L++I+   G  +L+F G +D  KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVLKRIGYHGK--ATGHGFRHTMSTILHEQGYNTAW----IELQLAHVDKNTIRGTYN  367
            +N  L+ +GY+ K    GHGFR    + L E G    W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDQRRVMLQWYADYMDNLERDGNVVHGEFG  401
            H A+ L++RR+MLQW AD++D  +R+  +   E++
Sbjct  355  HKAEHLEERRLMLQWWADFLDA-NREKGISPFEYA  388

334) SSON_3744 in NC_007384


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  276 bits (1032),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLAGAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLA+AR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

335) intL in NC_002655


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 258/382 (68%), Gaps = 25/382 (6%)

Query  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+    +   TF  VA EW  T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265
             L  + +P++LT + +YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

336) ECs4534 in NC_002695


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 258/382 (68%), Gaps = 25/382 (6%)

Query  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+    +   TF  VA EW  T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265
             L  + +P++LT + +YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

337) intL in NC_013008


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 258/382 (68%), Gaps = 25/382 (6%)

Query  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+    +   TF  VA EW  T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265
             L  + +P++LT + +YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

338) ECO55CA74_21080 in NC_017656


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 258/382 (68%), Gaps = 25/382 (6%)

Query  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+    +   TF  VA EW  T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265
             L  + +P++LT + +YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

339) CDCO157_4272 in NC_017906


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 258/382 (68%), Gaps = 25/382 (6%)

Query  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+    +   TF  VA EW  T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265
             L  + +P++LT + +YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

340) intC in NC_008258


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  275 bits (1029),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 253/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW      +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
              LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQAIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRDTYN  367
            +N A+ ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R +Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

341) SFxv_4026 in NC_017328


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  274 bits (1026),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 253/382 (67%), Gaps = 25/382 (6%)

Query  35   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  94
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  95   KEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  154
            K++K+ Q  +   TF  +A EW      +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  155  MKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  214
              LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  215  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  274
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  275  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  322
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  323  INQVIELLGYKGRLT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  376
            +N  + ++GY  ++   GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  377  H-ALYLDGRREMMQWYADYIDS  397
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

342) S4835 in NC_004741


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  274 bits (1026),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 253/382 (67%), Gaps = 25/382 (6%)

Query  35   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  94
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  95   KEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  154
            K++K+ Q  +   TF  +A EW      +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  155  MKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  214
              LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  215  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  274
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  275  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  322
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  323  INQVIELLGYKGRLT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  376
            +N  + ++GY  ++   GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  377  H-ALYLDGRREMMQWYADYIDS  397
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

343) SF3698 in NC_004337


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  274 bits (1026),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 253/382 (67%), Gaps = 25/382 (6%)

Query  35   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  94
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  95   KEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  154
            K++K+ Q  +   TF  +A EW      +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  155  MKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  214
              LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  215  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  274
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  275  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  322
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  323  INQVIELLGYKGRLT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  376
            +N  + ++GY  ++   GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  377  H-ALYLDGRREMMQWYADYIDS  397
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

344) ECH74115_5032 in NC_011353


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  273 bits (1020),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 258/382 (68%), Gaps = 25/382 (6%)

Query  50   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  109
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  110  KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  169
            K++K+    +   TF  VA EW  T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  170  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  229
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  230  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  289
             L  + +P++LT + +YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  290  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  337
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  338  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  391
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  392  H-AQYLDGRREMMQWYADYIDS  412
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

345) intL in NC_013941


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  273 bits (1020),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 258/382 (68%), Gaps = 25/382 (6%)

Query  50   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  109
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  110  KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  169
            K++K+    +   TF  VA EW  T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  170  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  229
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  230  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  289
             L  + +P++LT + +YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  290  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  337
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  338  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  391
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  392  H-AQYLDGRREMMQWYADYIDS  412
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

346) ETEC_3899 in NC_017633


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  273 bits (1022),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGNPGVAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G +PG  K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLACALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIALFKQLEPITKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGRLT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNAIRGTYN  367
            +N  + ++GY  ++   GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

347) intB in NC_005085


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 172/385 (45%), Positives = 252/385 (66%), Gaps = 25/385 (6%)

Query  32   VMPNGAKYWRMAYRFDGKQKTLAFGVYPTTSLKDAREKREAARKLLAAGTDPNAAKKEQK  91
            V PNG+KYWR+ YR++GKQK LA+GVYP  +L DAR +R+ ARKLLA G DP   KK++K
Sbjct  5    VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDK  64

Query  92   RERQLTVENSFEIVAREWYDKQLPRWTDDHAVRILDSLKADAFPDLGKLPVSQLTAPVIL  151
             E+  +   +F  VA EWY+ +  +W++DHA R+L SL  + F+ LG   +++L +  +L
Sbjct  65   VEQ--SKARTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLL  121

Query  152  DTIRKIEKRGAVETAQRVLQRISAVIRYAIQTGRAVHNPATDLTGAIRAKKVEHRPALPR  211
              I+ +E  G +E A R+ QR +A++RYA+Q+G    NPA +++GA+ + + +HRPAL  
Sbjct  122  APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALEL  181

Query  212  GELREFYRRL---AAEPLYIPTRIAMHLLMLTFVRPGELRAARWEEFDEERAEWRIPAER  268
              + E+  ++   ++ PL   TR A +L +L F+R++ELR ARW E+D E + W IP+ER
Sbjct  182  KRIPELLTKIDSYTGRPL---TRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  269  ------------MKMREPHLVPLSRQALELLKELRPLTGKSALLFPAVTDLKKPMSENTL  316
                         KMR  HLVPLSRQAL +LK+++ + G   L+F +  D  KPMSENT+
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  317  GYAMGRMGY--KGTATPHGFRALASTVLNEEGF-DPDIIEKQLAHAERNKVRAAY-HRAE  372
              A+  MGY  K     HGFR++A + L E G+   D +E+Q++H ERN VRAAY H+AE
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  373  YLEERRKMMQWWAEFLGRHQKSSID  397
             LEERR M+QWWA+FL+ ++  +I 
Sbjct  359  HLEERRLMLQWWADFLDANREKGIS  383

348) int in NC_021591


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  271 bits (1014),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 159/382 (42%), Positives = 255/382 (67%), Gaps = 25/382 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEISLSEARQRRDEAKRQVANAIDPSEQK  85
            MHL+VHPNGSKYWRLQYR++GKQKMLALG+YPEI+L++AR RRDEA++ +AN++DP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KVEKQARKAMVENTFKAIALEWHEYKRPNWSKGYAEDIMEAFENDIFPDIGKRPIAEIKP  145
            K +K  +      TFK +A+EW   ++ +WS + A+ ++ ++E+++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSK--ARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIVTGRAETNPASELASALTSPKSVHYP  205
             ++L++++ +E  G L+   +++Q    + RYA+ +G  + NPA E+A+A++S +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLLADDFPAFLQALAAYSGSPITRLATKILMLTGVRTIELRMAEWKEFDFEKRVWEVPVE  265
             L    +P +L  + +Y+G P+TR AT + +L  +R+ ELR A W E+DFE  +W +P E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHLVPLSDQVVSSLREIQVVTGRYNLVFPGRNDITKPMSEAS  313
            R             KMR  HLVPLS Q ++ L++I+   G  +L+F G +D  KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVLKRIGYHGKAT--GHGFRHTMSTILHEQGYNTAW----IELQLAHVDKNTIRGTYN  367
            +N  L+ +GY+ K    GHGFR    + L E G    W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLEQRREMLQWYGDYVDN  388
            H A+ LE+RR MLQW +D++D 
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

349) Dd586_2842 in NC_013592


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  267 bits (997),  Expect = 9e-73, Method: Compositional matrix adjust.
 Identities = 157/382 (42%), Positives = 256/382 (68%), Gaps = 25/382 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFDGKQKMLALGVYPEISLSEARQRRDEAKRQVTNSIDPSEKK  85
            MHL+VHPNGSKYWRLQYR++GKQKMLALGVYPEI+L++AR RRDEA++ ++N++DP++KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KVEKQARKVAVENTFKSVALEWHEYKRPNWSKGYAEDLMEAFENDIFPDIGKRPIAEIEP  145
            K +K  +  A   TFK VA+EW   ++ +WS + A+ ++ ++E+++F+ +G R IAE+  
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEALTTLRKLEKRGVLDKLRKVRQACKQVCTYAIVTGRAKTNPFAELASALTTAKSTHYP  205
             + L+ ++ +E  G L+   +++Q    +  YA+ +G    NP  E+A+A+++ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLLADQLPAFLKALEAYSGSPITRLATRILMLTGVRTIELRLAEWKEFDFDKRVWEVPVE  265
             L   ++P +L  +++Y+G P+TR AT + +L  +R+ ELR+A W E+DF+  +W +P E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHLVPLSDQVIEALRELQMITGRYNLVFPGRNDITKPISEAS  313
            R             KMR  HLVPLS Q +  L++++ + G  +L+F G +D  KP+SE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVLKRIGYHGK--ATGHGFRHTMSTILHEEGFNTAW----IELQLAHVDKNTIRGTYN  367
            +N  L+ +GY+ K    GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQHLENRRGMLQWYADYLES  388
            H A+HLE+RR MLQW AD+L++
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

350) AMBLS11_09695 in NC_018692


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  266 bits (996),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 162/383 (43%), Positives = 252/383 (66%), Gaps = 22/383 (5%)

Query  26   LRLLVKSNGNKFWRLKYRFAGKQKTLALGSYPETPLSKARELTMQARLTVKSGVDPAAEK  85
            ++LLV +NG+K+WRL+YR+ GKQK LALG YPE  L+ AR    +AR  + +GVDP+  K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   REKVREEQRLNEDLFMNVAMEWWEQQSGGWTENHARRVWLRLKDNSFTALGKRPISTIRP  145
            ++   E+ +     F +VA+EW   +   W+E+HA+RV   L DN F+ALG R I+ ++ 
Sbjct  61   KNDKVEQSKART--FKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  RDVIETVREIEKRGALDVAQRVLQDIGRVCRYAVQTERINFNPASELSDVLKSRKVEHRA  205
            RD++  ++ +E  G L+VA R+ Q    + RYAVQ+  I++NPA E+++ + S + +HR+
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  SLPREQLPAFVKALSTYEEKGRLLTKYAIQLLVLTFVRPGELRGARWEEFNFDDNIWRIP  265
            +L   ++P ++  + +Y   GR LT+ A +L +L F+R++ELR ARW E++F+ +IW IP
Sbjct  178  ALELKRIPELLTKIDSY--TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  ADR------------MKMRSEHIVPLSQQALQVIELIKPITQQYQLLFPSERDRNDPMSD  313
            ++R             KMR+ H+VPLS+QAL ++  IK +    +L+F +++D + PMS+
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  314  NTMRRAIFKLGYDGTKPGKAKANPHGFRATASSILNEQGF-NPDAIERQLSHMERNGVRA  372
            NT+  A+  +GYD     K     HGFR+ A S L E G+ + DA+ERQ+SHMERN+VRA
Sbjct  296  NTVNSALRVMGYD----TKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  373  AYTHHARYLDERKEMMQWWADYV  395
            AY H A  L+ER+ M+QWWAD++
Sbjct  352  AYIHKAEHLEERRLMLQWWADFL  374

351) GM21_1254 in NC_012918


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  263 bits (982),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 159/380 (42%), Positives = 250/380 (66%), Gaps = 18/380 (4%)

Query  26   MYLLVTPNGGKCWRLKYRFGGKEKVLALGTYPEISLVDARQRRHEARKLLANGVDPNEIK  85
            M LLV PNG+K WRL+YR+ GK+K+LALG YPEI+L DAR RR+EARKLLANGVDP + K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAQKAATITETENSFEVVAREWHQKFSPSWSGVHSDTTLRRLQADVFPAIGARPISEIKA  145
            K +K         +F  VA EW    +  WS  H++  L+ L+ ++F+A+G R I+E+K+
Sbjct  61   KNDKVE--QSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PDALAMLRRIESRGALETAHRIRTICGQVFRYAVATGRAERDCTADLKGALPPCKKSHLA  205
             D LA ++ +E  G LE A R++     + RYAV +G  + + + ++ GA+++C++ H +
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  AITDPKAVAPLLRAIDGYQGTIPVKSALQLAAMFFVRPGELRQAEWSEIDFENALWNIPA  265
            A+ + K ++ LL  ID+Y G    + A +L+ ++F+R++ELR A WSEIDFE ++W IP+
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  SR------------MKMKEPHIVPLASHAIAILKELQALTGRSRFLFPSGRSFTRPMSNN  313
             R             KM+  H+VPL+ +A+AILK+++ + G   ++F + +   +PMS+N
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  314  AINAALRRMGFD-KDEMTGHGFRAMARTILDEVLQFRPDFIEHQLAHAVKDPNGRAY-NR  371
            ++N+ALR MG+D K E+ GHGFR+MA + L E      D +E+Q++H  +++   AY ++
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  372  TAHLAERRKMMQTWAEYLDD  391
            + HL ERR M+Q WA++LD 
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

352) MADE_1010570 in NC_011138


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  262 bits (978),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 168/390 (44%), Positives = 257/390 (66%), Gaps = 22/390 (5%)

Query  26   LRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPEVSLKDAREAVSEARRQLRDDIDPSAIK  85
            ++LLV  NGSKYWRL+YR++GKQK LA+GVYPE++L DAR    EAR+ L +++DP+  K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QEKKHLSSVSEIELFNTQARLWWNKQKGQWSEGHAARIWTRLNDNALKTLGKRPIGEITP  145
            ++ K     S    F+  A  W   +K +WSE+HA R+   L+DN + +LG R I+E+  
Sbjct  61   KNDK--VEQSKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  QDIIRTVQKIETRGALDVAQRVLQDIRRVCRFAVQTGVLLHNPASELSGILEKRKTSHRA  205
            +D++  ++ +E  G L+VA R+ Q    + R+AVQ+G++  NPA E++G +   +  HR+
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  SLPREELPQFLRDLDAYHQQGRLLTKLAIELLVHTFVRPGELAGARWDEFDLEEKLWRIP  265
            +L    +P++L  +D+Y   GR LT+ A EL +  F+R++EL  ARW E+D+E  +W IP
Sbjct  178  ALELKRIPELLTKIDSY--TGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  AHR------------MKMKSDHIVPLSRQALAVLENTKPFSARFEFVFPSERDRFKQMSD  313
            ++R             KM++ H+VPLSRQALA+L + K F +  +++F +++D  K MS+
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  314  NTMRMAIFRMGYDGETKGKSKANPHGFRATASSILNETGF-NPDAIERQLSHMERNGVRA  372
            NT+  A+  MGYD     K     HGFR+ A S L E+G+ + DA+ERQ+SHMERN+VRA
Sbjct  296  NTVNSALRVMGYD----TKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  373  AYTHHARYLEERKEMMQWWSDYLDSLKNNG  402
            AY H A  LEER+ M+QWW+D+LD+ +++G
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDANREKG  381

353) intB in NC_009348


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  260 bits (972),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 173/394 (44%), Positives = 265/394 (68%), Gaps = 20/394 (5%)

Query  28   LFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPEVSLrearakrdearrVIAEGIDPGLVR  86
            + LLV+ +G KYW+L+YR  GK+K LALGVYPE++L +AR +RDEAR+++A+G+DPG  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  87   KQSKVASRLVSENSLEVLAREWHQSQFALWSPGHATRVIESLEVDVFPDLGLVPITELTA  146
            K+ KV        ++  +A EW  ++   WS +HA RV+ SLE ++F+ LG   I+EL +
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  147  PMILEALRKVEKRGATETAGRILQRVSAIMRYAIQTGRASYNPAQDLRGALKATKQEHRP  206
              +L +++ VE  G  E A+R+ QR +AIMRYA+Q+G   YNPAQ++ GA+ + +++HRP
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  207  ALPRSELPEFFRRLEAEPLNPATRLALHLLMLTMTRPGEVRFARWDEFDMERAEWRIPAA  266
            AL    +PE++ ++++    P TR A +L +L   R++E+RFARW E+D E + W IP+ 
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  267  R------------MKMRTEHLVPLSRQALAVLDELHQLTGHCELLFPSERKLTNPMSENT  314
            R             KMRT HLVPLSRQALA+L ++ Q+ G  +L+F +++   +PMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  315  LSYAMGRMGY--KGIATPHGFRALASTTLNEEGF-DPDVIERQLAHAERNKVRAAY-HRA  370
            ++ A+  MGY  K     HGFR++A ++L E G+   D +ERQ++H ERN VRAAY H+A
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  371  EYLDDRRKLLQWLADFYDSQRGSNVLPVNFNRVG  404
            E L++RR +LQW ADF D++R   + P ++ ++ 
Sbjct  358  EHLEERRLMLQWWADFLDANREKGISPFEYAKIN  391

354) AHML_14825 in NC_021290


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  258 bits (963),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 166/390 (43%), Positives = 264/390 (68%), Gaps = 19/390 (4%)

Query  27   FLLITSSGKYWRLKFRFGGKEKVLALGVYPEVSlkearvkreearrllaDGIDPSLARKQ  86
            +L+  +++KYWRL++R+ GK+K+LALGVYPE++L +ARV+R+EAR+LLA+G+DP+  +K+
Sbjct  3    LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN  62

Query  87   SKVASRLASENSFEVIAREWHQGQLARWSPGHAQRVIESLEADAFPELGLVPVAELTAPI  146
             KV    +   +F  +A EW  G   +WS +HA+RV+ SLE + F+ LG   +AEL +  
Sbjct  63   DKVEQ--SKARTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  147  MLDALRKIEARGATETAGRVLQRISSVMRYAIQTGRVSYNPAQDLKGALRATKQEHRPAL  206
            +L +++ +E  G  E A+R+ QR +++MRYA+Q+G + YNPAQ++ GA+ + +++HRPAL
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  207  PRADLPEFYRRLAAEPLNPATRLAIHLLMLTMTRPGEVRFARWDEFDMARAEWRIPAER-  265
                +PE+  ++ +    P TR A +L +L   R++E+RFARW E+D   + W IP+ER 
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  266  -----------MKMRAPHIVPLSRQALAVLEELRLISGHCELLFPSERKLTDPMSENTLS  314
                        KMR+ H+VPLSRQALA+L +++ + G  +L+F +++    PMSENT++
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  315  YAMGRMGY--KGIATPHGFRALASTILNEEGF-DPDVIERQLAHAERNKVRAAY-HRAEY  370
             A+  MGY  K     HGFR++A + L E G+   D +ERQ++H ERN VRAAY H+AE 
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  371  LDDRRKLLQWLADFYESQQGGNIRPMNFDR  400
            L++RR +LQW ADF ++++   I P ++ +
Sbjct  360  LEERRLMLQWWADFLDANREKGISPFEYAK  389

355) GEM_3075 in NC_018513


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  258 bits (964),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 168/395 (43%), Positives = 267/395 (68%), Gaps = 29/395 (7%)

Query  26   MYLHVTPNGGKYWRLAFRLHGKQKIYALGVYPQVSLAEARQMRDEAKKLIKQGIDPVIER  85
            M L V PNG+KYWRL +R +GKQK+ ALGVYP+++LA+AR  RDEA+KL+ +G+DP   +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KQTVRRRSEEQATTFELIAREWHKTKRSAWTESHAKKIMNSLEADIFPRLGDRPIGSISA  145
            K+   +  + +A TF  +A EW  T++  W+E HA ++++SLE ++F+ LG+R I+ + +
Sbjct  61   KND--KVEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PDLLMALRVIEKRGALEIAGRVLQRCNAVFRYAVATGRIVANPAAELRGALKTPERKHHA  205
             DLL +++ +E  G LE+A+R+ QR  A+ RYAV +G I  NPA E+ GA+ + +R+H++
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  ALAHDELPEFLAKLAGYDGDPQTRLGLQLMVHTFVRTGELRAASWAEFNLELSEWRIPAE  265
            AL    +PE+L+K+ +Y G P TR + +L +  F+R++ELR A W+E+++E S W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMREEHIVPLSKQAVALLRQLQAVGAGSDLVFPSGNGRRNKWISEN  313
            R             KMR  H+VPLS+QA+A+L+Q++   ++ DL+F + ++ ++  +SEN
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKP-MSEN  296

Query  314  TLLYALYRLGYHSR--ATGHGFRATASTILNEMGFHPDW----IERQLAHAERNKVRAAY  367
            T+  AL  +GY+++    GHGFR+ A + L E G+   W    +ERQ++H ERN VRAAY
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAY  353

Query  368  -NRALYLAERRQMMQVWSDYLDIAASGKEVVLSDF  401
             ++A  L ERR M+Q W+D+LD   + +E  +S F
Sbjct  354  IHKAEHLEERRLMLQWWADFLD---ANREKGISPF  385

356) int in NC_010694


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  254 bits (948),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNPNGARYWRLKYRAAGKEKLLAVGVYPDVSLSDARRRRDEAKKILAAGGDPGQEK  85
            + LLV+PNG++YWRL+YR  GK+K+LA+GVYP+++L+DAR RRDEA+K+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QAEKQSKILAVQNSFEAIALEWHEHKKTNWSEGYATDILEYLSKDIFPFVGKRAINEIKP  145
            + +K  +  +   +F  +A+EW   +K +WSE+ A  +L  L  ++F+ +G R I E+K 
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  AEMLAVLRKMEQRGVLDKLKKTRQACRQIFTHAVITGRAENNPVTDLAGALKAPKQKHFP  205
             ++LA ++ +E  G L+   + +Q    I   AV +G  + NP  ++AGA+ + +++H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLNVDQIPPFLNDLSNYSGSMITRYATQLLMITGLRTIELRASEWSDIDFDKGIWQIPAE  265
             L++ +IP +L  + +Y+G  +TR AT+L ++  +R+ ELR + WS+IDF+ +IW IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHIVPISSQAKSLLEAIHQLTGRGKYVFPGRNDAGKPMSEAS  313
            R             KMR  H+VP+S QA ++L  I Q+ G    +F G +D+ KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIKRIGYDGK--ATGHGFRHTMSTILHEQGYNSAW----VETQLAHVDKNSIRGTYN  367
            +N  ++ +GYD K    GHGFR    + L E G    W    VE Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDA  388
            H A+ L+ RR MLQW AD++DA
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

357) BURPS1710b_1290 in NC_007434


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  253 bits (946),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 168/381 (45%), Positives = 251/381 (66%), Gaps = 23/381 (6%)

Query  26   MFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRDEAREQLAAGIDPGEAK  85
            M LLV+PNG+KYWRL YR+ GKQK LALGVYP +TLA AR +RDEAR  LA G+DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEARRTAEIAAANSFEAVAREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGPRPIAEIDS  145
            K+ +   E + A +F  VA EW+++++  WS++ A++VL+SLE ++F+ +G R IAE+ +
Sbjct  61   KNDK--VEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIVTGRCSRNPAADIDAQTVLKKGPGVQ  205
             ++L+ ++ VE  G  E A R+ QR+ A+ +Y++ +G    NPA ++ +      +   Q
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA---SCNRQ  174

Query  206  HMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTFVRTTEMIRAEWSEFDEAAAEWRV  265
            H + +    IP+L+  ID+Y G  +TR A  L  L F+R++E+  A WSE+D  A+ W +
Sbjct  175  HRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  266  PPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQ-GRSHIS  312
            PPER             KMR  H+VPLSRQAL +L Q++ + G H ++F + + ++  +S
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  313  NNTMLYALYRIGYKSR--MTGHGFRGLAATALRELGF-GRDVVERQMAHAERNQVTAAYV  369
            +NT+  AL  +GY ++  + GHGFR +A ++L E G+ +RD VERQM+H ERN V AAY+
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  370  H-AEYLPERRRMMQAWGDHLD  389
            H AE L ERR M+Q W+D LD
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

358) int in NC_011745


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  252 bits (940),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 156/387 (41%), Positives = 250/387 (65%), Gaps = 25/387 (6%)

Query  39   LSLLIEPNGSKGWRLRYRFAGKPKMLSLGVYPEVSLSDARTARDEAKRLIAGGVNPSEVR  98
            + LL++PNGSK WRL+YR+ GK KML+LGVYPE++L+DAR  RDEA++L+A GV+P++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  99   KAQKREQANKCGNTFEVIAREWYEKRLDRWSPSYAEEMIETFEKDVFPYIGGRPIAEIKP  158
            K +K EQ++  + TF  +A EWY     +WS   A+ ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSK--ARTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  159  MELLAVLSRLNDRGATEKLRKVRQRCGEVFRYAIITGRAEYNPAPDLASAFAPHKKEHYA  218
             +LLA +  ++  G  E   +++QR   + RYA+ +G  +YNPA ++A+A A+ +++H +
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  219  YLKVDELPEFFRVFNTYTGSQIVKLGMRLLILTGLRPGELRQAEWQEIDFDNRLWEVPKE  278
             L +  +PE++  +++YTG  + + +  L +L  +R++ELR A W EIDF+  +W +P E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  279  R------------MKMRRPHCVPLSEQAIAILEQLKHMTGQYPFIFPGRIQHSKPMSEMA  326
            R             KMR  H VPLS QA+AIL Q+K+  G   +IF G  +  KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  327  MNVLIRRIGYAGRVT--GHGFRHTMSTILHEQGYNSAW----IETQLAHVDKNSIRGTYN  380
            +N  +R +GY  +V   GHGFR    + L E G    W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  381  H-AQYLDGRREMLQWYADYMDSLEQGG  406
            H A+ L+ RR MLQW AD++D+  + G
Sbjct  355  HKAEHLEERRLMLQWWADFLDANREKG  381

359) Tbd_0943 in NC_007404


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  252 bits (940),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 154/380 (41%), Positives = 252/380 (67%), Gaps = 20/380 (5%)

Query  25   LFLHISPSGGKWWRLAYRYTGKQKLLSLGTYPAVSLADARQRRDEAKKLLAHGVDPAENR  84
            + L + P+G+K WRL YRY GKQK+L+LG YP ++LADAR RRDEA+KLLA+GVDP++++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KATKQARQDRASNSFEAVAREWHAKFSSTWSANHSDRIIRRLENDIFPWLGDKPIADITP  144
            K  K   ++  + +F  VA EW +  +  WS +H++R+++ LE+++F+ LG++ IA++  
Sbjct  61   KNDKV--EQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  145  PTLLAALRRIEERGAVETAHRAMQNCGQVFRYSVATGRAERDPSQDLKGALPPVAKSHFK  204
              LLA+++ +E  G +E A R  Q    + RY+V +G  + +P+Q++ GA+++  + H +
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH-R  176

Query  205  SITDPVQIGVLLRNIDGYSGGPVVRSALRLAPLIFVRPGELRHAEWAHFDLGAAEWRYT-  263
            +  +  +I  LL +ID+Y+G P+ R A  L+ LIF+R++ELR A W+++D+ A+ W    
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  264  -------------VSKTNTEHIVPLSRQAISVLEELQPLTGHKRYVFPANRGEGRPMSEN  310
                          SK  T H+VPLSRQA+++L +++ + G    +F +N++  +PMSEN
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  311  TVNAALRSLGYD-KETLTGHGFRAMARTLLDEVLGFRPDIIEHQLAHAVRDPLGRAY-NR  368
            TVN+ALR +GYD K  + GHGFR+MA + L E      D +E+Q++H  R+++  AY ++
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  369  TTHLPERRKMMQGWADYLDE  388
            + HL ERR M+Q WAD+LD 
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

360) Q7A_2891 in NC_017857


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  250 bits (933),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 158/388 (41%), Positives = 258/388 (67%), Gaps = 18/388 (4%)

Query  25   LYIEVSTTGGKWWRFKFRFDGKQKRLSVGTYPDVGLKQAREQRDELRKQIANGVDPSDIR  84
            + + V   G+K WR+++R++GKQK L++G YP++ L +AR +RDE RK +ANGVDP+D +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  85   KAEKQLNAGQLSFEFVAREWHQKFRHRWSEKYALNTISRLEREVFPFIGSKNINDIKAPE  144
            K +K  ++   +F  VA EW    + +WSE  A   +  LE ++F+ +G +NI ++K+ +
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  145  LLAVLRRMESRGILETAHRVHQKCGQIFRYAVATGRAERDPSTDLKGALPPVKVKHHASI  204
            LLA ++ +E  G LE A R++Q+   I RYAV +G  + +P+ ++ GA+++ + ++H + 
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-RQHRPA  178

Query  205  IEPKQIGGLLRAINGYSGSFVTLCALRLAPLVFVRPGELRHAEWTEFDLEKAEWRIPAEK  264
            +E K+I  LL  I++Y+G  +T  A  L+ L+F+R++ELR A W+E+D+E + W IP+E+
Sbjct  179  LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  265  ------------MKMASVHIVPLSKQAIAVIETLKPLTGSGKYLFPSIRTITRPMSENTV  312
                         KM + H+VPLS+QA+A++  +K + G+   +F + +   +PMSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  313  NGALRRLGYTGD-EMVGHGFRSMASTILNEQG-WNRDAIERQLAHSERDGVRAAYNY-AE  369
            N+ALR +GY    E+ GHGFR+MA + L E G W+RDA+ERQ++H ER++VRAAY   AE
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  370  YLSERKRMMQSWANYLDGLTAGAAVLPF  397
             L ER+ M+Q WA++LD+     ++ PF
Sbjct  359  HLEERRLMLQWWADFLDA-NREKGISPF  385

361) Pecwa_1403 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  249 bits (931),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 157/382 (42%), Positives = 252/382 (66%), Gaps = 25/382 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFDGKQKTLALGVYPEITLSEARQRRDEAKRQIATGTDPSEQK  85
            MHL+VHPNGSKYWRLQYR++GKQK LALGVYPEITL++AR RRDEA++ +A G DP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KVDKQLRQTLVDNTFKAIALEWHEYKRPNWSKGYSEDLMEAFENDIFPDIGKRPVAEIKP  145
            K DK  +      TFK +A+EW   ++ +WS + ++ ++ ++E+++F+ +G R +AE+K 
Sbjct  61   KNDKVEQSK--ARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIVTGRAENNpaselasalpppkaTHYP  205
             ++L++++ +E  G L+   +++Q    + RYA+ +G  + NPA E+A+A+++ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLLPDELPDFLRALSTYSGSKITQLATRILMLTGVRTIELRQAEWKEFDFEKGLWEVPKE  265
             L    +P++L  + +Y+G  +T+ AT + +L  +R+ ELR A W E+DFE ++W +P E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFPGRNDITKPMSEAS  313
            R             KMR  HLVPLS Q +  L+Q++   G  +L+F G +D  KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVLKRIGYHGK--ATGHGFRHTMSTILHEQGYNTAW----IELQLAHVDKNTIRGTYN  367
            +N  L+ +GY+ K    GHGFR    + L E G    W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLEQRRGMLQWYGDFTDG  388
            H A+ LE+RR MLQW +DF D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

362) PC1_2870 in NC_012917


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  249 bits (929),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 158/382 (42%), Positives = 252/382 (66%), Gaps = 25/382 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFDGKQKTLALGVYPEITLSEARQRRDEAKRQIATGTDPSEQK  85
            MHL+VHPNGSKYWRLQYR++GKQK LALGVYPEITL++AR RRDEA++ +A G DP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KVDKQLRQTLVDNTFKAIALEWHEYKRPNWSKGYAEDLMEAFENDIFPDIGKRPVAEIKP  145
            K DK  +      TFK +A+EW   ++ +WS + A+ ++ ++E+++F+ +G R +AE+K 
Sbjct  61   KNDKVEQSK--ARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIVTGRAENNpaselasalpppkaTHYP  205
             ++L++++ +E  G L+   +++Q    + RYA+ +G  + NPA E+A+A+++ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLLPDELPTFLRALSTYSGSKVTQLATRILMLTGVRTIELRQAEWKEFDFEKGLWEVPKE  265
             L    +P +L  + +Y+G  +T+ AT + +L  +R+ ELR A W E+DFE ++W +P E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHLVPLSAQVIDALQQLQAVTGRYNLVFPGRNDITKPMSEAS  313
            R             KMR  HLVPLS Q +  L+Q++   G  +L+F G +D  KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVLKRIGYHGK--ATGHGFRHTMSTILHEQGYNTAW----IELQLAHVDKNTIRGTYN  367
            +N  L+ +GY+ K    GHGFR    + L E G    W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLEQRRGMLQWYGDFIDG  388
            H A+ LE+RR MLQW +DF+D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

363) ETAC_13020 in NC_020796


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  249 bits (930),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 248/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVNPNGTKYWRLKYRVAGKEKLLAVGVYPNVTLADARVKREDAKRVLAAGGDPGQEK  85
            + LLV+PNG+KYWRL+YR  GK+K+LA+GVYP++TLADARV+R++A+++LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QEEKRAKVMAVTNSFEKLAREWHEHKRPTWSKGYADDILEYLRKDIFPYIGKRAITDIKP  145
            +++K  +  A   +F  +A EW   ++  WS + A+ +L  L  ++F+ +G R I+++K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MDMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVITGRAEHNPVVDLASALKTPKQKHFP  205
             D+LA ++ +E  G L+   + +Q    I  YAV +G  + NP  ++A+A+ + +++H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLMADQLGEFLRALADYSGSRVTQNATRLLMLTGVRTVELRAAEWAEVDLDLSLWQIPPE  265
             L   ++ E+L  +  Y+G  +T+ AT L +L  +R+ ELR A W+E+D++ S+W IPPE
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHIVPLSEQALAIMQEMRRISGKGKYIFPGRNDAGKPMSEAS  313
            R             KMR  H+VPLS QALAI+++++++ G    IF G +D+ KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIKRIGYDGK--ATGHGFRHTMSTILHEQGYNTAW----VETQLAHADKNSIRGTYN  367
            +N  ++ +GYD K    GHGFR    + L E G    W    VE Q++H ++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYLDA  388
            H A+ L+ RR MLQW AD+LDA
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

364) ECL_01076 in NC_014121


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  248 bits (926),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 154/384 (41%), Positives = 254/384 (67%), Gaps = 27/384 (7%)

Query  26   LYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYPTVSLADARQKREDAKKLLAAGEDPGEVk  85
            + L V+PNGS+YWR++YR+ GK+K L++GVYP ++LADAR +R++A+KLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kakkhaltaatEILNPFREVALEWHKMKSPKWSEGYASDIIEAFEKDIFPHIGHRPIADI  145
            K  K   + A      F+EVA+EW   +  KWSE+ A  ++ ++E ++F+ +G+R IA++
Sbjct  61   KNDKVEQSKA----RTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAEL  115

Query  146  KPLELLEVLRLIEARGAMEKAKKVRQRCGEVFRYAIVTGRAIYNPAPDLASAMQGHEAVH  205
            K  +LL  ++ +E  G +E A +++QR   + RYA+ +G   YNPA ++A+A+ + +  H
Sbjct  116  KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH  175

Query  206  YPFLKVNELPEFFTALNAYSGSPIVllgahlliltglRTGELRAAEWREVDFDNAVWEIP  265
             P L ++ +PE++T +++Y+G P+   +++L +L  +R++ELR A W E+DF+ ++W IP
Sbjct  176  RPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  KER------------MKMRRTHIVPLSKQALVHLGRLKELTGNYPLMFPGRNDPSKFMSE  313
             ER             KMR TH+VPLS+QAL  L ++K++ G   L+F G +D+ K MSE
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  314  ASINQVFKRIGYAGR--VTGHGFRHTMSTILHEKGFNSAW----IETQLAHLDKNSIRGI  367
             ++N  ++ +GY  +  V GHGFR    + L E G+   W    +E Q++H+++NS+R+ 
Sbjct  296  NTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAA  352

Query  368  YNH-AQYIEGRREMMQWYADFLEG  390
            Y H A+ +E RR M+QW ADFL++
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDA  376

365) MYA_1732 in NC_017920


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  247 bits (924),  Expect = 5e-67, Method: Compositional matrix adjust.
 Identities = 164/377 (44%), Positives = 246/377 (66%), Gaps = 20/377 (5%)

Query  26   MYLEIMPNGSKYWRLKYRIDGKEKRMALRVYPAVTLLAARKARDEIKDQLRAGLDPSHEK  85
            M L + PNGSKYWRL+YR +GK+K +AL VYP +TL  AR  RDE +  L  G+DP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KRVKAQRSLDRENSFEPIAREWHQQKKGAWSERHADRIMKLLERELFPAIGARPIAEIMA  145
            K  K ++S  +  +F  +A EW   +K  WSE HA+R++K LE +LF+A+G R IAE+ +
Sbjct  61   KNDKVEQS--KARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PELLAVIRKIEARDAIELAHKTIQATSQIFRYAIATGRAERDSAPDLRGALKPRFVVHMR  205
             +LLA I+ +E  + +E+A +  Q T+ I RYA+ +G  + ++A ++ GA+ +    H  
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  RVSEAELPELMRQISAYDGDFQTRLALQFMALTFVRTSELRFAEWTEID-EKKEWRIPPE  264
             +    +PEL+ +I +Y G   TR A ++  L F+R+SELRFA W+EID E   W IPPE
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  265  K------------MKMRTPHIVPLSTQALEVIAKLPELNGHSQFLFPSRSSSKKPMSENT  312
            +             KMRT H+VPLS QAL ++ ++ ++ G  +++F +   S KPMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  313  ILYALYRMGYHSR--MTGHGFRGLASTILNEHSF-NRDWIERQLAHSERDGVRAAYNH-A  368
            +  AL  MGY+++  + GHGFR +A + L E ++ +RD +ERQ++H ER++VRAAY H A
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  369  EYLPERRKMMQWWSNYL  385
            E L ERR M+QWW+++L
Sbjct  358  EHLEERRLMLQWWADFL  374

366) Bamb_0912 in NC_008390


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  247 bits (923),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 153/380 (41%), Positives = 252/380 (67%), Gaps = 11/380 (2%)

Query  26   LFLLVTPAGQRYWRLKYRAAGKEKLLALGVYPEVTLATARRKRDEARERLAAGIDPGEAK  85
            + LLV P G +YWRL+YR  GK+K+LALGVYPE+TLA AR +RDEAR  LA G+DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAEKRTVRLNAENSFEAVAREWHAKYAPTWSENHAGRILRRLEVDAFPWISGKPIADLAP  145
            K +K  V  +   +F  VA EW +     WSE+HA R+L+ LE + F+ ++ + IA+L  
Sbjct  61   KNDK--VEQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PDVLDALRRVEKRGALETAHRLHANISQVCRYAVATGRAQRDVTADLRGALPPVQQEHMA  205
             D+L +++ VE  G LE A RL+   + + RYAV +G  + + + ++ GA+++ +++H +
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  ALTDPKQVAELLRAIDGYQGTFPVMCALRLAPLLFQRPGELRAAEWAELDLDAGTWEIPS  265
            AL + K+++ELL  ID+Y G      A  L+ L+F R++ELR A W+E+D++A+ W IP+
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  DR-----MKRTKQGKASGGAHIVPLSSQAVAVLGELHALTGNGRFLFPSVRTKDRPMSDN  320
            +R     +K++ +G     +H+VPLS QA+A+L ++  + G   ++F + +  ++PMS+N
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  321  TINGALLRLGYNGDT-MTGHGFRAMARTILDEVLGLPAAIIEAQLAHAVKDPLGRAY-NR  378
            T+N+AL  +GY+    + GHGFR+MA + L E    +   +E Q++H  ++++  AY ++
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  379  TAHLPQRREMMQRWADYLDG  398
            + HL +RR M+Q+WAD+LD+
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

367) Pecwa_1377 in NC_013421


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  247 bits (922),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 159/382 (42%), Positives = 251/382 (66%), Gaps = 25/382 (6%)

Query  26   MHLMVHPNGSKYWRLQYRFAGKQKTLALGVYPEITLSEARQRRDEAKRQIATGTDPSEQK  85
            MHL+VHPNGSKYWRLQYR+ GKQK LALGVYPEITL++AR RRDEA++ +A G DP+++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KVDKQLRQTLVDNTFKAIALEWREYKRPNWSKGYAEDLMEAFENDIFPDIGKRPIAEIKP  145
            K DK  +      TFK +A+EW   ++ +WS + A+ ++ ++E+++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSK--ARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIVTGRAENNpaselasalpppkaTHYP  205
             ++L++++ +E  G L+   +++Q    + RYA+ +G  + NPA E+A+A+++ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  YLLPDELPDFLRALSTYSGSKVTQLATRILMLTGVRTIELRQAEWKEFDFEKRLWEVPKE  265
             L    +P++L  + +Y+G  +T+ AT + +L  +R+ ELR A W E+DFE  +W +P E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFPGRNDITKPMSEAS  313
            R             KMR  HLVPLS Q +  L+Q++   G  +L+F G +D  KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVLKRIGYHGK--ATGHGFRHTMSTILHEQGYNTAW----IELQLAHVDKNTIRGTYN  367
            +N  L+ +GY+ K    GHGFR    + L E G    W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLEQRRSMLQWYGDFVDG  388
            H A+ LE+RR MLQW +DF+D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

368) SN31241_7100 in NC_021902


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  246 bits (919),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 158/382 (42%), Positives = 249/382 (66%), Gaps = 25/382 (6%)

Query  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145
            +++K+ Q  S + TF  +A EW   +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLRADELPVFLRKLAEYHGSPVTrmatnlllltglrtielrSAEWSEIDFDNALWTIPES  265
             L    +P +L K+  Y G P+TR AT+L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRKHVVPLSRQTTDILLQLKTFSGQYQLVFPGRCDINKPMSEAS  313
            R             KMR  H+VPLSRQ+  IL Q+K F G  +L+F G  D +KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNAIRGTYN  367
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

369) mll6432 in NC_002678


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  246 bits (919),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 154/379 (41%), Positives = 248/379 (66%), Gaps = 22/379 (5%)

Query  31   LQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLISLAEAREARDTAKRLLLRGIDPAQER  90
            ++L V+P GS+ WRL YR+ GKQK+LALG YP I+LA+AR  RD A++LL  G+DP++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  91   KSQKASAED--TFRSIAED-YVDKLK-KEGRADRTITKVKWLLDFAYPTFGDKSVREIDP  146
            K++K       TF+ +A + Y  + K  E++A+R +  +    D  ++++G++++ E+  
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLE---DNLFAALGERNIAELKT  117

Query  147  ATILAALRSVEVRGRYESARRMRSTIGSVFRYAIATARADVDPTIALRGALVGPTVTPRA  206
              +LA++++VE+ GR E A R++    ++ RYA+ ++  D +P+  + GA+ +     R+
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  207  AVTDPKALGGLLRAINAFDGQPTTRAALKLMALLFPRPGELRAAGWDEFDFESSVWSIPE  266
            A+ + K +  LL  I+++ G+P TR A  L  L+F R++ELR A W E+DFE+S+W+IP 
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  267  GR------------MKMRRPHRVPLSTQAVSVLTSLREISGGGSLLFPSVRSGSRPISDN  314
             R             KMR  H VPLS QA+++L  ++++ G+  L+F + + + +P+S+N
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  315  TLNAALRRMGYG-KEEATAHGFRATASTLLNECGKWHPDAVERQLAHIENNDVRRAYA-R  372
            T+N+ALR MGY+ K E  +HGFR+ A + L E G W  DAVERQ++H+E N VR AY  +
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  373  AEHWEERVRMMQWWADYLD  391
            AEH EER  M+QWWAD+LD
Sbjct  357  AEHLEERRLMLQWWADFLD  375

370) SeSA_A0374 in NC_011094


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  246 bits (919),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 157/384 (41%), Positives = 251/384 (66%), Gaps = 27/384 (7%)

Query  26   LYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYPAVSLADARQKREDAKKLLAAGNDPGEVk  85
            + L V+PNGS+YWR++YR+ GK+K L++GVYP ++LADAR +R++A+KLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kakklalTSATEIVNPFKEVALEWHKMKSPKWSKGYASDILEAFEKDIFPHIGQRPIADI  145
            K  K+  + A      FKEVA+EW   +  KWS + A  +L ++E ++F+ +G+R IA++
Sbjct  61   KNDKVEQSKA----RTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAEL  115

Query  146  KPLELLEVLRLIEARGAMEKAKKVRQRCGEVFRYAIVTGRAIYNPAPDLASAMQGHEAVH  205
            K  +LL  ++ +E  G +E A +++QR   + RYA+ +G   YNPA ++A+A+ + +  H
Sbjct  116  KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH  175

Query  206  YPFLKATELPEFFTALNAYTGSPIVVLGAHLLILTGLRTGELRAAEWCEIDFDNALWEIP  265
             P L    +PE++T +++YTG P+   +++L +L  +R++ELR A W EIDF+ ++W IP
Sbjct  176  RPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  266  KER------------MKMRRAHLVPLSNQalalletlkeltGNYPLMFPGRNDPSKSMSE  313
             ER             KMR +HLVPLS QALA+L  +K++ G   L+F G +D+ K+MSE
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  314  ASINQVFKRIGYAGRVT--GHGFRHTMSTILHEKGFNSAW----IETQLAHLDKNSIRGI  367
             ++N  ++ +GY  +V   GHGFR    + L E G+   W    +E Q++H+++NS+R+ 
Sbjct  296  NTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAA  352

Query  368  YNH-AQYLEGRREMMQWYANYLSE  390
            Y H A+ LE RR M+QW A++L  
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDA  376

371) GBP346_A1152 in NC_012695


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  246 bits (917),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 168/381 (45%), Positives = 251/381 (66%), Gaps = 23/381 (6%)

Query  46   MFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRDEAREQLAAGIDPGEAK  105
            M LLV+PNG+KYWRL YR+ GKQK LALGVYP +TLA AR +RDEAR  LA G+DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  106  KEARRTAEIAAANSFEAVAREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGPRPIAEIDS  165
            K+ +   E + A +F  VA EW+++++  WS++ A++VL+SLE ++F+ +G R IAE+ +
Sbjct  61   KNDK--VEQSKARTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  166  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIVTGRCSRNPAADIDAQTALKKGPGVQ  225
             ++L+ ++ VE  G  E A R+ QR+ A+ +Y++ +G    NPA ++ +  A   +   Q
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA---SCNRQ  174

Query  226  HMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTCVRTTEMIRAEWSEFDEAAAEWRV  285
            H + +    IP+L+  ID+Y G  +TR A  L  L  +R++E+  A WSE+D  A+ W +
Sbjct  175  HRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  286  PPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQ-GRSHIS  332
            PPER             KMR  H+VPLSRQAL +L Q++ + G H ++F + + ++  +S
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  333  NNTMLYALYRIGYKSRMT--GHGFRGLAATALRELGF-GRDVVERQMAHAERNQVTAAYV  389
            +NT+  AL  +GY +++   GHGFR +A ++L E G+ +RD VERQM+H ERN V AAY+
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  390  H-AEYLPERRRMMQAWGDHLD  409
            H AE L ERR M+Q W+D LD
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

372) SSON53_21650 in NC_016822


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  246 bits (920),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 134/329 (41%), Positives = 219/329 (67%), Gaps = 17/329 (5%)

Query  26   MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK  85
            M LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145
            K++K+ Q  +   TF  +A EW  +   +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE  265
             L  + +P++L  + +YTG  +T+ AT++ +L  +R+ ELRFARW +IDFE+ +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES  313
                          KM+  H+VPLS Q + ++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVIELLGYKGR--LTGHGFRHTMSTIL  340
            +N  + ++GY  +  + GHGFR    + L
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSL  326

373) SeHA_C4738 in NC_011083


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  245 bits (915),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 159/382 (42%), Positives = 248/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145
            +++K+ Q  S + TF  +A EW   +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLRADELPVFLRKLAEYHGSPVTrmatnlllltglrtielrSAEWSEIDFDNALWTIPES  265
             L    +P +L K+  Y G P+TR AT+L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFPGRCDINKPMSEAS  313
            R             KMR  H+VPLSRQA  IL Q+K F G   L+F G  D +KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNAIRGTYN  367
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMMQWYADYIDS  388
            H A+ L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

374) C380_06330 in NC_018708


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  244 bits (911),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 167/383 (44%), Positives = 251/383 (66%), Gaps = 27/383 (7%)

Query  28   LYLEVTAAGGKYWRWKYRYGGKEKRLALGVYPDVTLAQAREARDQARKVLAGGDDPGQLK  87
            + L V + G+KYWR +YRY GK+K LALGVYP++TLA+AR  RD+ARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  88   RDAKMTSAVHQANTFEAVARVWWE---HWRDGKSERHAAYAIKRLEADAFPVLGARPIAN  144
            ++ K+  +  +A TF  VA  W      W ++ ++R     +K LE + F+ LG R IA+
Sbjct  61   KNDKVEQS--KARTFKEVAIEWYGTNKKWSEDHAHR----VLKSLEDNLFAALGERNIAE  114

Query  145  ITAKDLTRMAKAVQDRGAIDLAHRVLQMAGQVMRYAVAHDLIERNPATDVKPSDTLRSRR  204
            + ++DL    KAV+  G +++A R+ Q +  +MRYAV  +LI+ NPA ++  ++++ S  
Sbjct  115  LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAVASCN  172

Query  205  KENYARLGEKELPELLRKIEAYQGGPYTRLAMQLMALTFVRTTELIAARWAEFDLQAAEW  264
            +++ + L  K +PELL KI++Y G P TR A +L  L F+R++EL  ARW+E+D++A+ W
Sbjct  173  RQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIW  232

Query  265  RIPPER------------MKMKTPHIVPLSPQAVEVLKVLHTLSGGRALLFPGERDHDKP  312
             IPPER             KM+T H+VPLS QA+ +LK +  + G++ L+F G++D +KP
Sbjct  233  TIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKP  292

Query  313  MSNNTILKALERMGYKGRMT--GHGFRGMASTILHEQGY-AHHAIELQLAHQERNEVSAA  369
            MS+NT+  AL  MGY  ++   GHGFR MA + L E G  +++A+E Q++H ERN V AA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  370  YNH-ALYLKERRVMMCDWANHLD  391
            Y H A  L ERR+M+  WA+ LD
Sbjct  353  YIHKAEHLEERRLMLQWWADFLD  375

375) NAL212_1009 in NC_015222


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  244 bits (910),  Expect = 6e-66, Method: Compositional matrix adjust.
 Identities = 158/380 (42%), Positives = 250/380 (66%), Gaps = 20/380 (5%)

Query  25   LYLLVKATG-KYWRMDYRFVGKRKTLAIGVYPTVSLVAARKKRDEARELLGKHIDPSLAK  83
            + LLV + G KYWR++YR+ GK+K LA+GVYP ++L  AR +RDEAR LL++ +DP+  K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  84   AINKRIVLTAAENTFKAVALEWHTKTSKSWAESTANNIKRYLEKDIFPWLGNRAIKDIGA  143
              +K  V  +   TFK VA+EW   T+K W+E  A+ + + LE ++F+ LG+R I ++ +
Sbjct  61   KNDK--VEQSKARTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  144  PDLLAVLRKIESRGAHEKAQRCREYAGRVFRYAIATGRAERDPSGDLRGALTPVKVKHHA  203
             DLLA ++ +E  G  E A R ++ +  + RYA+ +G  + +P+ ++ GA+++ + +H++
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  204  SITEPKAIGALLRSIWGFNGSYITKCALQLAPLVFVRPGELRQAEWQEIDFDKQEWRIAG  263
            ++ E K I  LL  I ++ G  +T+ A +L+ L+F+R++ELR A W EIDF+   W I+ 
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  264  NK------------MKMGEAHIIPLSPQVIEILQSIHPLTGDGQYIFPSIRSSARPMSEN  311
            ++             KM  +H++PLS Q + IL+ I  + G  + IF + + S +PMSEN
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  312  TINAALRRMGYE-KDEMTGHGFRSMASTLLHEHG-WPHEAIERQLAHAERNKVVAAYNY-  368
            T+N+ALR MGY+ K E+ GHGFR+MA + L E G W+++A+ERQ++H ERN V AAY   
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  369  AEHLPKRKEMMRWWADYLDE  388
            AEHL  R+ M++WWAD+LD 
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

376) Gbem_3253 in NC_011146


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  244 bits (910),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 163/392 (42%), Positives = 263/392 (68%), Gaps = 22/392 (5%)

Query  26   MYLLVTPQGGKCWRLKYRIAGKEKVLALGTYPEISLSEARERKDAARKLIANGHDPGevk  85
            M LLV P+G+K WRL+YR  GK+K+LALG YPEI+L++AR R+D ARKL+ANG DPG   
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG--D  58

Query  86   kaqkaaktaeaeNTFQAVTQEWHGRFKSQWSEKHAEQILRRLELDVFPWLGTRPVGEIKA  145
            K ++         TF+ V+ EW G  + +WSE HA+++L+ LE ++F+ LG R ++E+K+
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PELLAVLRRIEMRT-LETAHRVRIACSQVFRYAVATGRAERDPVADLKGALPPVKNNHFA  204
             +LLA ++ +EM   LE A R++   + + RYAV +G  + +P  ++ GA+++ + +H +
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  205  ALTDPKAVAPLLRAIDGFEGSFVVKCALKLAALTFVRPGELRHAEWSEIDLEAARWEIPA  264
            AL + K ++ LL  ID++ G  + + A  L+ L F+R++ELR A WSEID+EA+ W IP+
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  265  ER------------MKMKVAHLVPLSTQAVDILKELHPLTGSGTYVFPCHRSPLRCMSEN  312
            ER             KM+ +HLVPLS QA+ ILK++  + G+   +F  ++ + + MSEN
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  313  AVNAALRRMGFE-KSEITGHGFRAMA-RTILDEVLHVRPDFIEHQLAHAVKDPLGRAY-N  369
            +VN+ALR MG++ K E+ GHGFR+MA  ++++  L  R D +E+Q++H  ++++  AY +
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSR-DAVERQMSHMERNSVRAAYIH  355

Query  370  RTSHLAERQKMMQTWADFLDGLKTGAKVLPFQ  401
            ++ HL ER+ M+Q WADFLD+ +  + + PF+
Sbjct  356  KAEHLEERRLMLQWWADFLDANREKG-ISPFE  386

377) EcE24377A_3377 in NC_009801


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  243 bits (906),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 160/382 (42%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDISLAEARIKRDDARKIISEGGDPGEKK  85
            + LLV   G++YWRL+YR  GK+K LALGVYP+I+LA+AR++RD+ARK++++G DPG+KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYTRSVLEALDKDIFPYLGKRSVTDILP  145
            +++K+ Q  S + TF  +A EW   +   WSE  ++ VL +L+ ++F+ LG R+++++  
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLRADELPVFLRKLAEYHGSPVTrmatnlllltglrtielrSAEWSEIDFDNALWTIPES  265
             L    +P +L K+  Y G P+TR AT+L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFPGRCDINKPMSEAS  313
            R             KMR  H+VPLSRQA  IL Q+K F G   L+F G  D +KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

378) EcSMS35_3112 in NC_010498


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  243 bits (906),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 160/382 (42%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145
            +++K+ Q  S + TF  +A EW   +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  HLRADELPVFLRKLAEYHGSPVTrmatnlllltglrtielrSAEWSEIDFDNALWTIPES  265
             L    +P +L K+  Y G P+TR AT+L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFPGRCDINKPMSEAS  313
            R             KMR  H+VPLSRQA  IL Q+K F G   L+F G  D +KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-ALYLDGRREMMQWYADYIDS  388
            H A  L+ RR M+QW AD++D+
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

379) CSSP291_04405 in NC_020260


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  242 bits (903),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 161/387 (42%), Positives = 259/387 (67%), Gaps = 25/387 (6%)

Query  26   LYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDISLAEARTKRDEARKTLANDKDPGEVK  85
            + L+V+ NGSKYWR++YR+ GK+K L++G YP+I+LA+AR +RDEARK LAN+ DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYADYVNRAFKNNVFPFVGSQPVNEIKP  145
            K + + Q  S + TF  +A+EWY ++   WS + A+ V +++ +N+F+ +G + + E+K 
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LELLSVLQRMEKRGAPELASKVRQRCSEVFRYAIVTGRAEYNPAADLGSALQGYEKQHYP  205
             +LL+ ++ +E  G  E+A++++QR + + RYA+ +G  +YNPA ++++A+ + ++QH P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTAAELPEFLQKLSQYTGSlvtllatrllmltglrtvELRMAEWSEIDFENHIWEIPKS  265
             L    +PE+L K+  YTG  +T  AT L +L  +R+ ELR A WSEIDFE  IW IP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHIVPlsaqslaalrqlkqlTGTYQFIFAGRNDVNKPMSEAS  313
            R             KMR  H+VPLS Q+LA L+Q+KQ+ G+ ++IF G +D +KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INMVIKRIGYDKR--ATGHGFRHTMSTILHEEGFNTAW----IETQLAHVDKNAIRGTYN  367
            +N  ++ +GYD +    GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLEGRKEMMQWYGDYLDGLRLDG  393
            H A+ LE R+ M+QW +D+LD+ R  G
Sbjct  355  HKAEHLEERRLMLQWWADFLDANREKG  381

380) ECL_03688 in NC_014121


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  242 bits (903),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 161/387 (42%), Positives = 259/387 (67%), Gaps = 25/387 (6%)

Query  26   LYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDISLAEARTKRDEARKTLANDKDPGEVK  85
            + L+V+ NGSKYWR++YR+ GK+K L++G YP+I+LA+AR +RDEARK LAN+ DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYADYVNRAFKNNVFPFVGSQPVNEIKP  145
            K + + Q  S + TF  +A+EWY ++   WS + A+ V +++ +N+F+ +G + + E+K 
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LELLSVLQRMEKRGAPELASKVRQRCSEVFRYAIVTGRAEYNPAADLGSALQGYEKQHYP  205
             +LL+ ++ +E  G  E+A++++QR + + RYA+ +G  +YNPA ++++A+ + ++QH P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTAAELPEFLQKLSQYTGSlvtllatrllmltglrtvELRMAEWSEIDFENHIWEIPKS  265
             L    +PE+L K+  YTG  +T  AT L +L  +R+ ELR A WSEIDFE  IW IP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHIVPlsaqslaalrqlkqlTGTYQFIFAGRNDVNKPMSEAS  313
            R             KMR  H+VPLS Q+LA L+Q+KQ+ G+ ++IF G +D +KPMSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INMVIKRIGYDKR--ATGHGFRHTMSTILHEEGFNTAW----IETQLAHVDKNAIRGTYN  367
            +N  ++ +GYD +    GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLEGRKEMMQWYGDYLDGLRLDG  393
            H A+ LE R+ M+QW +D+LD+ R  G
Sbjct  355  HKAEHLEERRLMLQWWADFLDANREKG  381

381) YPTB3886 in NC_006155


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  240 bits (895),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 246/382 (65%), Gaps = 25/382 (6%)

Query  26   MYLLVKPNGSKYWRLKYRFVGKEKMLSIGVYPDVSLADARQKRDEARKVLAAGGDPGEVK  85
            M LLV PNGSKYWRL+YR+ GK+KML++GVYP+++LADAR +RDEARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKLAQKLSSENTFEAIAREWHKQKADRWSLRYRDEIIDTFEKDIFPYLGRRPIAEIKP  145
            K DK+ Q  S   TF  +A EW      +WS    + ++ ++E ++F+ LG R IAE+K 
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MelletlrrlekrGALEKMRKVRQRCGEVFRYAIVTGRAEYNpapdlatalatpKKTHFP  205
             +LL  ++ +E  G LE   +++QR   + RYA+ +G  +YNPA ++A A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGVRTQELRFARWEDIDFEKRLWEIPSE  265
             L    +P ++  + +YTG  +T+ AT++ +   +R+ ELRFARW +IDFE  +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFIGRNDRAKPISKES  313
                          KM+  H+VPLS Q + +++ +K + G   L+FIG +D  KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IETQLAHVDKNAIRGTYN  367
            VN  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AHYLEGRREMMQWYGDNLES  388
            H A+ LE RR M+QW +D L++
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

382) YPTS_4103 in NC_010634


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  240 bits (895),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 246/382 (65%), Gaps = 25/382 (6%)

Query  26   MYLLVKPNGSKYWRLKYRFVGKEKMLSIGVYPDVSLADARQKRDEARKVLAAGGDPGEVK  85
            M LLV PNGSKYWRL+YR+ GK+KML++GVYP+++LADAR +RDEARK+LA G DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KADKLAQKLSSENTFEAIAREWHKQKADRWSLRYRDEIIDTFEKDIFPYLGRRPIAEIKP  145
            K DK+ Q  S   TF  +A EW      +WS    + ++ ++E ++F+ LG R IAE+K 
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWY-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  MelletlrrlekrGALEKMRKVRQRCGEVFRYAIVTGRAEYNpapdlatalatpKKTHFP  205
             +LL  ++ +E  G LE   +++QR   + RYA+ +G  +YNPA ++A A+A+ ++ H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGVRTQELRFARWEDIDFEKRLWEIPSE  265
             L    +P ++  + +YTG  +T+ AT++ +   +R+ ELRFARW +IDFE  +W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  ------------VIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFIGRNDRAKPISKES  313
                          KM+  H+VPLS Q + +++ +K + G   L+FIG +D  KP+S ++
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  VNQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IETQLAHVDKNAIRGTYN  367
            VN  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++N++R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AHYLEGRREMMQWYGDNLES  388
            H A+ LE RR M+QW +D L++
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

383) EAE_24695 in NC_015663


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  238 bits (889),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 253/382 (67%), Gaps = 25/382 (6%)

Query  26   LYLMVNTNGSKYWRMKYRFAGKEKKLSFGIYPDISLAEARTKRDEARKLLANDKDPGEVK  85
            + L+V+ NGSKYWR++YR+ GK+K L++G+YP+I+LA+AR +RDEARKLLAN+ DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KATLLAKKLSVTNTFEAIALEWYSAKVSGWSKSYADYVKRAFKNNVFPYLGSQPVNEIKP  145
            K   + +  S + TF  +A+EWY+++   WS   A+ V +++ +N+F+ LG + + E+K 
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LALLSVLQKMEKRGATELASKVRQRCNEVFRYAIVTGRAEYNPAADLGSALQGHEKQHYP  205
              LL+ ++ +E  G  E+A++++QR   + RYA+ +G  +YNPA ++++A+ + ++QH P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLTAAELPDFLQKLSNYSGSlitllatrllmltglrtVELRLAEWREIDFDNRIWEIPKT  265
             L    +P++L K+ +Y+G  +T  AT L +L  +R+ ELR+A W EIDF+  IW IP  
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMKRPHVVPlsaqslsalrqlKVLTGNYKLIFAGRNDVNIAMSEAS  313
            R             KM+  H+VPLS Q+L+ L+Q+K + G   LIF G +D + +MSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INMVIKRIGYDKR--ATGHGFRHTMSTILHEQGFNSAW----IETQLAHVDKNSIRGTYN  367
            +N  ++ +GYD +    GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLEGRREMMQWYADFMDA  388
            H A+ LE RR M+QW ADF+DA
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

384) Galf_2041 in NC_014394


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  238 bits (888),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 167/381 (44%), Positives = 247/381 (65%), Gaps = 21/381 (5%)

Query  26   MYIEVMPSGSKYWRLKYRYAGKEKRLALGVYPEVSLKdarerrdaarKLIANGTDPGEAK  85
            M + V P+GSKYWRL+YRY GK+K LALGVYPE++L DAR RRD ARKL+ANG DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QAQKREGKIAAANTFEAVAREWVENRSNDWTAGHKALTLRTLEQDAFPSIGRRPIAEISS  145
            + +K E   + A TF  VA EW    ++ W+ +H    L++LE++ F+++G R IAE+ +
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  SEVLATVRAIEKRGALEIAGRVLQRCSAVFRYAIATDRCKNNPAFKMSEALKSPTRSHYN  205
             ++LA ++A+E  G LE+A+R+ QR +A+ RYA+ ++    NPA  M+ A+ S  R H  
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  TIEKGGFPKLLRDIDGYQGSPMTTYILQLMALTFTRTGELVNAEWKEIDLDRAEWLIPAE  265
            ++E   +P LL  ID+Y G P+T    +L  L F R++EL  A W EID++ + W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHLVPLSVQAVAVFREAAKLSGDRVHVFPNRNDPSQPASNAI  313
            R             KMR  HLVPLS QA+A++++  ++ G +  +F   +D+ +P S+  
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  ILRALGRMGYTGKMT--GHGFRSAASTMLNENKSKWGIHRDTIELQLAHVEKNASRAAYN  371
            +  AL  MGY  K+   GHGFR+ A + L E+ + W+  RD++E Q++H+E+N+ RAAY 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIES-GLWS--RDAVERQMSHMERNSVRAAYI  354

Query  372  F-AEYLDERRTMMQQWADHLD  391
              AE L+ERR M+Q WAD LD
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

385) W5S_3565 in NC_017845


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  238 bits (887),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 251/382 (66%), Gaps = 25/382 (6%)

Query  26   LYLLVKPNGARYWRLKYRVAGKEKLLALGVYPDVTLadarakrdeakrGIAGGIDPSEAK  85
            + LLV PNG++YWRL+YR  GK+K+LALGVYP++TLADAR +RDEA++ +A G+DP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RKEKAILEAQVNNTFQDIATEWHSSKLKKWSEGYASDIMEAFNKDVFPYIGKKPIAEIKP  145
            +++K  +E     TF+++A EW +++ KKWSE+ A  ++ +++ ++F+ +G + IAE+K 
Sbjct  61   KNDK--VEQSKARTFKEVAIEWYGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  LELLNVLRRMEGRGATEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESSHYP  205
             +LL  ++ +E  G  E A +++QR   + RYA+ +G  +YNPA ++++A+ + +  H P
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  FLAAPDLPAFFEALSSYSGSMLVVLAARLLIITGLRTGELRGATWKEIDSDTAVWEIPAE  265
             L    +P ++  + SY+G  L   A+ L ++  +R++ELR A W EID ++++W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMRRPHIVPLSSQAQAIIARIREMTGRYPHIFPGRNDPRKTMSEAS  313
            R             KMR  H+VPLS QA AI+ +I++  G    IF G +D++K MSE +
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INQVFKRIGYSGKVT--GHGFRHTMSTILHEQGYNTAW----IETQLAHVDKNSIRGTYN  367
            +N  ++ +GY  KV   GHGFR    + L E G    W    +E Q++H+++NS+R++Y 
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSRDAVERQMSHMERNSVRAAYI  354

Query  368  H-AQYLDGRREMLQWYADYMDA  388
            H A+ L+ RR MLQW AD++DA
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

386) Mesau_02378 in NC_019973


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  237 bits (884),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 155/380 (41%), Positives = 244/380 (65%), Gaps = 22/380 (5%)

Query  26   LQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLISLAEAREARDTAKRLLLRGIDPALER  85
            ++L V+P GS+ WRL YR+ GKQK+LALG YP I+LA+AR  RD A++LL  G+DP+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KLQKASAED--TFRSIAED-YVDKLK-KEGRADRTITKVKWLLDFAYPAFGDKCVREIDP  141
            K +K       TF+ +A + Y  + K  E++A+R +     L D  ++A+G++ + E+  
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKS---LEDNLFAALGERNIAELKT  117

Query  142  VTILAALRSVEDRGRYESARRLRSTIGSVFRYAIATARADLDPTVALRGALVGPTVTPRA  201
              +LA++++VE  GR E A RL+    ++ RYA+ ++  D +P+  + GA+ +     R+
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  202  AVTDPMALGGLLRAINAFDGQPTTRAALKLMALLFPRPGELRAAGWDEFDFESSVWSIPE  261
            A+ +   +  LL  I+++ G+P TR A  L  L+F R++ELR A W E+DFE+S+W+IP 
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  262  GR------------MKMRRPHRVPLSRQAVGVLTSLRRISGGGSLLFPSVRSGLRPISDN  309
             R             KMR  H VPLSRQA+++L  ++++ G+  L+F + + + +P+S+N
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  310  TLNAALRRMGYG-KEEATAHGFRATASTLLNECGKWHPDAIERQLAHVENNDVRRAYA-R  367
            T+N+ALR MGY+ K E  +HGFR+ A + L E G W  DA+ERQ++H+E N VR AY  +
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  368  AEHWEERVKMMQWWADYLEE  387
            AEH EER  M+QWWAD+L+ 
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

387) Mesci_2349 in NC_014923


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  237 bits (884),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 155/380 (41%), Positives = 244/380 (65%), Gaps = 22/380 (5%)

Query  26   LQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLISLAEAREARDTAKRLLLRGIDPALER  85
            ++L V+P GS+ WRL YR+ GKQK+LALG YP I+LA+AR  RD A++LL  G+DP+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KLQKASAED--TFRSIAED-YVDKLK-KEGRADRTITKVKWLLDFAYPAFGDKCVREIDP  141
            K +K       TF+ +A + Y  + K  E++A+R +     L D  ++A+G++ + E+  
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKS---LEDNLFAALGERNIAELKT  117

Query  142  VTILAALRSVEDRGRYESARRLRSTIGSVFRYAIATARADLDPTVALRGALVGPTVTPRA  201
              +LA++++VE  GR E A RL+    ++ RYA+ ++  D +P+  + GA+ +     R+
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  202  AVTDPMALGGLLRAINAFDGQPTTRAALKLMALLFPRPGELRAAGWDEFDFESSVWSIPE  261
            A+ +   +  LL  I+++ G+P TR A  L  L+F R++ELR A W E+DFE+S+W+IP 
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  262  GR------------MKMRRPHRVPLSRQAVGVLTSLRRISGGGSLLFPSVRSGLRPISDN  309
             R             KMR  H VPLSRQA+++L  ++++ G+  L+F + + + +P+S+N
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  310  TLNAALRRMGYG-KEEATAHGFRATASTLLNECGKWHPDAIERQLAHVENNDVRRAYA-R  367
            T+N+ALR MGY+ K E  +HGFR+ A + L E G W  DA+ERQ++H+E N VR AY  +
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  368  AEHWEERVKMMQWWADYLEE  387
            AEH EER  M+QWWAD+L+ 
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

388) Mesop_2493 in NC_015675


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  237 bits (884),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 155/380 (41%), Positives = 244/380 (65%), Gaps = 22/380 (5%)

Query  26   LQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLISLAEAREARDTAKRLLLRGIDPALER  85
            ++L V+P GS+ WRL YR+ GKQK+LALG YP I+LA+AR  RD A++LL  G+DP+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KLQKASAED--TFRSIAED-YVDKLK-KEGRADRTITKVKWLLDFAYPAFGDKCVREIDP  141
            K +K       TF+ +A + Y  + K  E++A+R +     L D  ++A+G++ + E+  
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKS---LEDNLFAALGERNIAELKT  117

Query  142  VTILAALRSVEDRGRYESARRLRSTIGSVFRYAIATARADLDPTVALRGALVGPTVTPRA  201
              +LA++++VE  GR E A RL+    ++ RYA+ ++  D +P+  + GA+ +     R+
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  202  AVTDPMALGGLLRAINAFDGQPTTRAALKLMALLFPRPGELRAAGWDEFDFESSVWSIPE  261
            A+ +   +  LL  I+++ G+P TR A  L  L+F R++ELR A W E+DFE+S+W+IP 
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  262  GR------------MKMRRPHRVPLSRQAVGVLTSLRRISGGGSLLFPSVRSGLRPISDN  309
             R             KMR  H VPLSRQA+++L  ++++ G+  L+F + + + +P+S+N
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  310  TLNAALRRMGYG-KEEATAHGFRATASTLLNECGKWHPDAIERQLAHVENNDVRRAYA-R  367
            T+N+ALR MGY+ K E  +HGFR+ A + L E G W  DA+ERQ++H+E N VR AY  +
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  368  AEHWEERVKMMQWWADYLEE  387
            AEH EER  M+QWWAD+L+ 
Sbjct  357  AEHLEERRLMLQWWADFLDA  376

389) Bcen_1752 in NC_008060


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 165/381 (44%), Positives = 248/381 (66%), Gaps = 23/381 (6%)

Query  26   MFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVTLATARKKRDEAREQIAAGIDPGEak  85
            M LLV+PNG+KYWRL YR+ GKQK LALGVYP +TLA AR +RDEAR  +A G+DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kdarraaeiaaansfeavaREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPIAEIDS  145
            K+ +     A +    A+  EW+++++  WS++ A++VL+SLE ++F+ +G R IAE+ +
Sbjct  61   KNDKVEQSKARTFKEVAI--EWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQTVLKKGPGVQ  205
             ++L+ ++ VE  G  E A R+ QR+ A+ +Y++ +G    NPA ++ +      +   Q
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA---SCNRQ  174

Query  206  HMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTFVRTTEMIRAEWSEFDEAAAEWRV  265
            H + +    IP+L+  ID+Y G  +TR A  L  L F+R++E+  A WSE+D  A+ W +
Sbjct  175  HRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  266  PPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQ-GRSHIS  312
            PPER             KMR  H+VPLSRQAL +L Q++ + G H ++F + + ++  +S
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  313  NNTMLYALYRMGYKSR--MTGHGFRGLAATALRELGF-GRDVVERQMAHAERNQVTAAYV  369
            +NT+  AL  MGY ++  + GHGFR +A ++L E G+ +RD VERQM+H ERN V AAY+
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  370  H-AEYLPERRRMMQAWGDHLD  389
            H AE L ERR M+Q W+D LD
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

390) Bcen2424_2364 in NC_008542


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 165/381 (44%), Positives = 248/381 (66%), Gaps = 23/381 (6%)

Query  26   MFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVTLATARKKRDEAREQIAAGIDPGEak  85
            M LLV+PNG+KYWRL YR+ GKQK LALGVYP +TLA AR +RDEAR  +A G+DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kdarraaeiaaansfeavaREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPIAEIDS  145
            K+ +     A +    A+  EW+++++  WS++ A++VL+SLE ++F+ +G R IAE+ +
Sbjct  61   KNDKVEQSKARTFKEVAI--EWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQTVLKKGPGVQ  205
             ++L+ ++ VE  G  E A R+ QR+ A+ +Y++ +G    NPA ++ +      +   Q
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA---SCNRQ  174

Query  206  HMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTFVRTTEMIRAEWSEFDEAAAEWRV  265
            H + +    IP+L+  ID+Y G  +TR A  L  L F+R++E+  A WSE+D  A+ W +
Sbjct  175  HRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  266  PPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQ-GRSHIS  312
            PPER             KMR  H+VPLSRQAL +L Q++ + G H ++F + + ++  +S
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  313  NNTMLYALYRMGYKSR--MTGHGFRGLAATALRELGF-GRDVVERQMAHAERNQVTAAYV  369
            +NT+  AL  MGY ++  + GHGFR +A ++L E G+ +RD VERQM+H ERN V AAY+
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  370  H-AEYLPERRRMMQAWGDHLD  389
            H AE L ERR M+Q W+D LD
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

391) Despr_0274 in NC_014972


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 165/388 (43%), Positives = 268/388 (70%), Gaps = 11/388 (2%)

Query  25   LYLLVKSTG-KYFRFNYRFQDKQKTLALGVYPDVSlagarerlaearkliaDGIDPGEQR  83
            + LLV + G KY R++YR+++KQK LALGVYP+++LA+AR R  EARKL+A+G+DPG+++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  84   KMDKEAATNLNSVEAVAREWFLKNKHTWTDNHARDIITRLEANVFPWLGRTPIADVTAPM  143
            K DK   ++  +   VA EW+  NK  W+++HA+ ++  LE N+F+ LG   IA++ +  
Sbjct  61   KNDKVEQSKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD  119

Query  144  LLAVLRRIEDRGAIETAHRIKQMCGQVFRYAVATGRAERDPSADLRGALPPPPSKSMATI  203
            LLA ++ +E  G +E A R++Q    + RYAV +G  + +P+ ++ GA+++   +  +++
Sbjct  120  LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL  179

Query  204  TDPKGVSALLRAIRGYKGEIITRCALRLAPLTFVRPGELRHAEWADIDLDRAEWKIPPEK  263
             + K ++ LL  I +Y G  +TR A  L+ L F+R++ELR A W++ID++ + W IPPE+
Sbjct  180  -ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPER  238

Query  264  RKL---KKALKAIP-QNFHFVPLSRQALAVLRELQPLTGEGRYVFPSLRTGERPMSENTV  319
              +   K + ++   +  H+VPLSRQALA+L++++ + G    +F + + +++PMSENTV
Sbjct  239  EPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTV  298

Query  320  NAALRRMGY-AKDEMTGHGFRAMASTLLHEQG-WPSDVIERQLAHKERNSVKAAYNY-AQ  376
            N+ALR MGY +K E+ GHGFR+MA + L E G W+ D +ERQ++H ERNSV+AAY   A+
Sbjct  299  NSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAE  358

Query  377  HIPERRKMMQAWADYLDALEKGADIIPI  404
            H+ ERR M+Q WAD+LDA ++  +I P+
Sbjct  359  HLEERRLMLQWWADFLDA-NREKGISPF  385

392) Fraau_1988 in NC_017033


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  234 bits (871),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 168/391 (43%), Positives = 259/391 (67%), Gaps = 21/391 (5%)

Query  26   MYLEVMPNGSRYWRLKYRFGGKEKRLALGVYPGISladarkrredarrlladGIDPGAAR  85
            M L V PNGS+YWRL+YR+ GK+K LALGVYP I+LADAR RR++AR+LLA+G+DPG  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEAKQEATAEAGGAVTFEQVARQWLARQDV-AEVTANKNQWLLEEYLFPSIGQRPIADIT  144
            K+ K     E + A TF +VA +W + +   +E  A++    LE+ LF+++G+R IA++ 
Sbjct  61   KNDK----VEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  145  PRELLAALRETEDKGLLETARRSKIKAGQVFRYAIIEGLCEADPMASLRGALKTTRNRHH  204
             R+LLA+++  E  G LE A R + ++  + RYA+  GL + +P   + GA+ ++ NR+H
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQH  175

Query  205  AAITDPVQIGGLMRAMDGFAGTFTVRCALLLSALLFVRPGELRKAEWAEMDLDGAMWRIP  264
             +  +  +I  L+  +D+++G    R A  L+ L+F+R++ELR A W+E+D+++++W IP
Sbjct  176  RPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  265  GEK------------MKMGAPHLVPLSEQALAILRDLHGLTGHARYVFSGLRTDSRPMSE  312
             E+             KM + HLVPLS QALAIL+++  + G    +F G +   +PMSE
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  313  NTVNTALRALGYD-KATMTAHGFRSMAATRLNEMG-WNADAIERQLAHAESNKVRDAYTS  370
            NTVN+ALR +GYD K  + +HGFR+MA + L E G W+ DA+ERQ++H E N VR AY  
Sbjct  296  NTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIH  355

Query  371  QAQYLPERQKMMQAWADYLDSLKAGGTVVAF  401
            +A+ L ER+ M+Q WAD+LD+ +  G + +F
Sbjct  356  KAEHLEERRLMLQWWADFLDANREKG-ISPF  385

393) Bamb_2421 in NC_008390


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  232 bits (866),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 163/381 (43%), Positives = 247/381 (65%), Gaps = 23/381 (6%)

Query  26   MFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRDEAREQIAAGIDPGEak  85
            M LLV+PNG+KYWRL YR+ GKQK LALGVYP +TLA AR +RDEAR  +A G+DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kdakraaeiaaansfeavaREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPMAEIDS  145
            K+ K     A +    A+  EW+++++  WS++ A++VL+SLE ++F+ +G R +AE+ +
Sbjct  61   KNDKVEQSKARTFKEVAI--EWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQTVLKKGPGVQ  205
             ++L+ ++ VE  G  E A R+ QR+ A+ +Y++ +G    NPA ++ +      +   Q
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA---SCNRQ  174

Query  206  HMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALTFVRTTEMIRAEWSEFDEAAAEWRV  265
            H + +    IP+L+  ID+Y G  +TR A  L  L F+R++E+  A WSE+D  A+ W +
Sbjct  175  HRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  266  PPER------------MKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQ-GRSHIS  312
            PPER             KMR  H+VPLSRQAL +L Q++ + G H ++F + + ++  +S
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  313  NNTMLYTLYHMGYKSR--MTGHGFRGPTATALRELGF-GRDVVERQMAHAERNQVTAAYV  369
            +NT+  +L  MGY ++  + GHGFR  + ++L E G+ +RD VERQM+H ERN V AAY+
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  370  H-AEYLPERRRMMQVWGDHLD  389
            H AE L ERR M+Q W+D LD
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

394) Mpe_A1087 in NC_008825


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  228 bits (850),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 160/396 (41%), Positives = 248/396 (63%), Gaps = 21/396 (5%)

Query  23   LYLEVTAAGGRYWRMKYRHGGKEKRLAFGVYPEVTLraardrrdearrVLDQGGDPGELR  82
            + L V + G++YWR++YR  GK+K LA+GVYPE+TL  AR RRDEAR++L +G DPG+ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  83   KaakaqaaheaSNTFEAVARDWLTHQADSWEAVTLARIKAAFKADVFPQLGARPMAQIKP  142
            K  + +  +  + TF  VA +W       W      R+  ++  ++F+ LG R +A++K 
Sbjct  61   K--NDKVEQSKARTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  143  REVATVVKAIEARGAGDMAARVLQRIRAVFRFAVVHERIDSNPMLDLQPGELLKPRQVRH  202
            R++ + +KA+E  G  ++AAR+ QR  A+ R+AV    ID NP  ++  +     RQ  H
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--H  175

Query  203  RAALADRDLPVFLEKLAAYDGDVSTSAALRLLMLTAVRPGELRGARWDEIDMDAAEWRIP  262
            R+AL  + +P +L K+ +Y G   T  A  L +L  +R++ELR ARW EID +A+ W IP
Sbjct  176  RPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  263  AER------------MKMRSPHVVPLSRQALDVLQLMQPLSGERELVFPSPYYPGKPLSE  310
            +ER             KMR+ H+VPLSRQAL +L+ ++ + G ++L+F +   + KP+SE
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  311  NTLNSALARMGY--KGLATAHGFRALFSTVANESGH-SPDVIERQLAHVERNAVRAAY-H  366
            NT+NSAL  MGY  K    +HGFR++  +   ESG  S D +ERQ++H+ERN+VRAAY H
Sbjct  296  NTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIH  355

Query  367  RSTYLKDRAQLMQWWADYLDGRRSGKVVPLSSARVA  402
            ++  L +R  ++QWWAD+LD+ R   + P+  A++ 
Sbjct  356  KAEHLEERRLMLQWWADFLDANREKGISPFEYAKIN  391

395) RSc0968 in NC_003295


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  228 bits (850),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 166/378 (44%), Positives = 244/378 (65%), Gaps = 20/378 (5%)

Query  26   MYLEVMPNGSKYWRLKYRIAGKEKRLALGVYPSVGlaqartarddarrliaaGTDPSQAR  85
            M L V PNGSKYWRL+YR  GK+K LALGVYP + LA+AR  RD+AR+L+A G DP++ +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KEAKLATTTARTHTFEVVAREWHEKQSATWVPTYATKVLHSLETDIFPDLGARPITEITA  145
            K+ K+  + ART  F  VA EW   +   W    A +VL SLE ++F+ LG R I+E+ +
Sbjct  61   KNDKVEQSKART--FKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PQMLATLRKVESRDALETVARLQQRCSAVFRYAVVTGRAAHNPCTDLKGAFKTAKVQHMA  205
             ++LA ++ VE  + LE  ARLQQR +A+ RYAV +G    NP  ++ GA  + + QH +
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  RVQANEVPTLIKNIRGYDGDLITRIALQFMALTFVRTKELIGAQWSEIDFETEEWRIPAE  265
             ++ + +P L+ +I +Y G  +TR A ++  L F+R+ EL  A+WSEIDFE+  W IP+E
Sbjct  178  ALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKMREPHFVPLSWQAIALLRAAEKMTGNRQYVF-QSPKGRTHISNNT  312
            R             KMR  H+VPLS+QA+A+L+   +  G ++ +F  +  ++  +S+NT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  313  ILYALYRLGYHSRMT--GHGFRGLASTMLHEQGF-NPDVIERQLAHAERNKVRAAYNH-A  368
            +  AL  +GY++++   GHGFR +A + L E G+ + D +ERQ++H ERN VRAAY H A
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  369  QYLPERRRMMQHWADHLD  386
            + L ERR M+Q WAD LD
Sbjct  358  EHLEERRLMLQWWADFLD  375

396) NH8B_1001 in NC_016002


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  228 bits (850),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 159/380 (42%), Positives = 241/380 (64%), Gaps = 16/380 (4%)

Query  32   VMPTGAKYWRLKYRFGGKEKSLAIGVYPEVSIKEARQKKDAARRLLADGVDPGEKKKAIK  91
            V P G+KYWRL+YR+ GK+K LA+GVYPE+++ +AR ++D AR+LLA+GVDPG+KKK  K
Sbjct  5    VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDK  64

Query  92   RDQTIEDASSFRAVAIEWHEKMAAEWAPRHAAAVLRSLEMYLFPALGDRPIAQITAMELM  151
             +Q+   A +F+ VAIEW       W+  HA  VL+SLE  LF+ALG+R IA++ + +L+
Sbjct  65   VEQS--KARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLL  121

Query  152  LELRKVEQLGLHDTTKRLRERCTAIFRRAEVTGRASSNPAAALVDEFISPVSAPQPALEQ  211
              ++ VE  G  + + RL++R TAI R A  +G    NPA  + +   S     +PALE 
Sbjct  122  APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALEL  181

Query  212  EDLPAFLDALSTTDRITLQTKYLVQLIMILFTRIGETVRAEWDHIDLEAGVWEIPPE---  268
              +P +L  + +     L T+   +L +++F R +E   A W +ID+EA++W IPPE   
Sbjct  182  KRIPELLTKIDSYTGRPL-TRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP  240

Query  269  TRKLKRKLMANA--SAHVVPLPRQAVEIFRQLQAFKLGDSNYVFPSFRYRKNHMSEATPL  326
               +K+   ++   ++H+VPL+RQA+ I++Q++ F  G  + +F + +   + MSE T  
Sbjct  241  IPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC-GAHDLIFIGNHDSHKPMSENTVN  299

Query  327  KAYERMGYGGNNKAHGHVVTHGFRATASTILNEAGF-NPDAIERQLSHKEPNKVRAAY-N  384
             A   MGY+ +     +V  HGFR+ A + L E+G+ + DA+ERQ+SH E N VRAAY +
Sbjct  300  SALRVMGYDTK----VEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIH  355

Query  385  RAKYLEERRKMLQCWADYLD  404
            +A  LEERR MLQ WAD+LD
Sbjct  356  KAEHLEERRLMLQWWADFLD  375

397) SJA_C1-32120 in NC_014006


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  226 bits (843),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 157/387 (41%), Positives = 250/387 (65%), Gaps = 26/387 (6%)

Query  26   LFLYVTPKGGRYWRMNYRYLGKQKTLAFGVWPDTGLADAREQRDAARKLLARGEDPAERI  85
            + L V P+G++YWR++YRY GKQK LA+GV P+  LADAR +RD ARKLLA G DP+++ 
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KLDRIAATVAASNSFKAVADEWLIKVER--EDRSAATMKKLRWLLAFINASIGKRPIASI  143
            K D++  +   + +FK VA EW     +  ED++   +K L      + A++G R IA +
Sbjct  61   KNDKVEQS--KARTFKEVAIEWYGTNKKWSEDHAHRVLKSLE---DNLFAALGERNIAEL  115

Query  144  SAQELLVMLRKMEGKGRYETAKRLRSTCSQIFRYAIATARAERDVAADLRGALIAPKPVH  203
             +++LL  ++ +E  GR E A RL+   + I RYA+ ++  + + A ++ GA+ + +  H
Sbjct  116  KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH  175

Query  204  RAAITSAPGAGALLRAIESFEGHSNTR--AALRLLPHVFVRPGELRFAEWADFDLEKAIW  261
            R+A+        LL  I+S+ G++ TR  + L LL  +F+R++ELRFA W+++D+E +IW
Sbjct  176  RPALELKR-IPELLTKIDSYTGRPLTRWATELTLL--IFIRSSELRFARWSEIDFEASIW  232

Query  262  TIPPHK------------TKMRRAHSIPLSKQAIAIIGSIEHDADYSRFLFPSLRSVDRP  309
            TIPP++            +KMR +H +PLS+QA+AI+  I +  +   ++F + +  ++P
Sbjct  233  TIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKP  292

Query  310  MSENTINAALRRMGY-AQDEMTGHGFRAMAATLLNEMGLWHPDAIERQLAHCDNNAVRRA  368
            MSENT+N+ALR MGY ++ E+ GHGFR+MA + L E GLW  DA+ERQ++H + N+VR A
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  369  YT-RGEYWDERVRMMQHWSDHLDFLRD  394
            Y  ++E  +ER  M+Q W+D LD  R+
Sbjct  353  YIHKAEHLEERRLMLQWWADFLDANRE  379

398) XALc_1804 in NC_013722


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  226 bits (844),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 157/385 (41%), Positives = 258/385 (68%), Gaps = 27/385 (7%)

Query  26   LYLLMRPDGARWWRWDYRRPNTGKRNTLSLGTYPDTGladardkrdaarkllaaGVDPGE  85
            + LL++P+G++ WR +YR    GK++ L+LG YP+  LADAR +RD ARKLLA GVDPG+
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   QRKRAKEQAAMVAPAGETFETVAREWMARQTVARVTAEKNRWLLETF---LFPEIGSRPI  142
            ++K  K + +     + TF  VA EW +  T  + + +  +++L ++   LF+ +G R I
Sbjct  59   KKKNDKVEQSK----ARTFKEVAIEWYG--TNKKWSEDHAHRVLKSLEDNLFAALGERNI  112

Query  143  GEITPRELLDALRKIEATGKLETAGRAKIKAGQVFRYAMLEGKAEIDPTASLRGALKTVK  202
            +E+  R+LL +++ +E +G+LE A+R + ++  + RYA+  G  + +P+  + GA+ + +
Sbjct  113  AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN  172

Query  203  ARHHASITDPVKIGQLLRAIEGFIGQPVTHAALKLAPLVFVRPGELRAAEWGEIDLDAAM  262
             R+H +  +  +I +LL  I+++ G+P+T+ A  L+ L+F+R++ELR A W+EID++A++
Sbjct  173  -RQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASI  231

Query  263  WRIRPER------------MKMKAAHLVPLSSQAVAILRDLHALTGGGPHVFPGLR-PNR  309
            W I PER             KM+++HLVPLS QA+AIL+++  + G+   +F G + +++
Sbjct  232  WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHK  291

Query  310  PMSENTINAALRGLGYASD-EMTGHGFRSMAATRLNEMG-WNPDAIERQLAHAETNKVRE  367
            PMSENT+N+ALR +GY +  E+ GHGFR+MA + L E G W+ DA+ERQ++H E N VR 
Sbjct  292  PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRA  351

Query  368  AYTHAAQYLPERIRMMQAWADYLDG  392
            AY H A+ L ER  M+Q WAD+LD+
Sbjct  352  AYIHKAEHLEERRLMLQWWADFLDA  376

399) Fraau_3064 in NC_017033


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  226 bits (841),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 163/386 (43%), Positives = 260/386 (68%), Gaps = 22/386 (5%)

Query  27   MFLHITTKG-RYWRLKYRVAGKEKLLALGVYPEVSLaearkrrdearrVIGEGGDPSAIR  85
            M L +  +G +YWRL+YR  GK+K+LALGVYPE++LA+AR RRDEAR+++++G DP+  +
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   RTTKVTAVLATANTFQAVAEEWLAQHKARMAPATYNKAVWMLGDLVYPWLGRRPISDIEA  145
            +  KV    + A TF+ VA EW + +K +    + ++ +  L D +++ LG R I+++ +
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGTNKKWSEDHA-HRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PELLAVLRRIEARGAHTTAHRTKQRCGQVFRYAIATGRAKRDPSADLRGALAPLNPTSRA  205
             +LLA ++ +E  G    A R +QR   + RYA+ +G    +P+ ++ GA+A+ N   R+
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  206  AITDPLRVGELLRAIDGYSGTFPVIC-ALRLAPMLFVRPGELRHAEWAEFDLDQSLWRIP  264
            A+ +  R+ ELL  ID+Y+G  P+   A  L+ ++F+R++ELR A W+E+D++ S+W IP
Sbjct  178  AL-ELKRIPELLTKIDSYTGR-PLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  265  AEK------------MKMRDEHLVPLPDQALAILRDLLPLTGPDGFLFPGERSASRPMSE  312
            +E+             KMR  HLVPL+ QALAIL+++  + G+++++F G++ + +PMSE
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  313  NTVNAALRRLGYD-KDTMTGHGFRAMASTRLNELG-WSPDVIERQLAHAERNKVRAAY-N  369
            NTVN+ALR +GYD K  + GHGFR+MA + L E G WS D +ERQ++H ERN VRAAY +
Sbjct  296  NTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIH  355

Query  370  RAQYLPERQRMMQAWADYLDSLKAGG  395
            +A+ L ER+ M+Q WAD+LD+ +  G
Sbjct  356  KAEHLEERRLMLQWWADFLDANREKG  381

400) int in NC_020409


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  224 bits (836),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 161/384 (42%), Positives = 243/384 (64%), Gaps = 23/384 (5%)

Query  28   LEVTPTGSKLWRLRYRYNDKGKMMALGKLTDVDLAQA---RDECRKWKRCLREGFDPALV  84
            L V P GSK WRL+YRY++K KM+ALG   ++ LA+A   RDE RK    L +G DP+  
Sbjct  3    LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKL---LANGVDPGDK  59

Query  85   KKEEDARSSGKDSFETVTREWFAKFKQKWAEQTGVRKLARLESHVFPLIGSLPIDKVDAP  144
            KK++    S   +F  V+ EW++  ++KW+E+ + R L  LE ++F+ +G   I  + + 
Sbjct  60   KKNDKVEQSKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  145  QIRRVVLRLESLEKLHTAHRVKNIIGEIMRYAVAMGLILHNPVPDLAGVLPPTKEIHRAS  204
            ++   +  +E   +L+ A R+++    IMRYAV  GLI  NP  ++AG +++ +  HR++
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  205  IVDPKGIGGLLRAIDEYQGSLVTRCALKLAPITFVRPGELRHAEWSEIDYEGKEWRIPAE  264
            + + K I  LL  ID Y G  +TR A  L+ + F+R++ELR A WSEID+E+  W IP+E
Sbjct  179  L-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  265  K------------MKMKRPHVVPLSRQAVEVLKEVELVTGHGGYIFPSERSSARPMSNNT  312
            +             KM+  H+VPLSRQA+ +LK++    G  + IF +++ S +PMS+NT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  313  INAALRRMGY-TKDEMTGHGFRSMASTNLNELGF-HPDHIERQLAHVEANRVRAAYNY-A  369
            +N+ALR MGY TK E+ GHGFR+MA ++L E G+   D +ERQ++H+E N VRAAY   A
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  370  EHLVERKKMMQAWADWLDGVKAGG  393
            EHL ER+ M+Q WAD LD+ +  G
Sbjct  358  EHLEERRLMLQWWADFLDANREKG  381

401) BCAL2961 in NC_011000


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  224 bits (835),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 160/381 (42%), Positives = 250/381 (66%), Gaps = 15/381 (3%)

Query  26   LFLLVTPAGQRYWRLKYRAAGKEKLLALGVYPDVTlaaarrkrdeareklaaGIDPGEAK  85
            + LLV P G +YWRL+YR  GK+K+LALGVYP++TLA AR +RDEAR  LA G+DPG+ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   KAEKRTARLSAENSFEAVAREWHIKYAPT--WSESHGSRILRRLEVDAFPWIGSKPIAEL  143
            K +K     S   +F  VA EW   Y+    WSE H+ R+L+ LE + F+ +G + IAEL
Sbjct  61   KNDKVEQ--SKARTFKEVAIEW---YGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL  115

Query  144  APPDVLEVLRRVEKRGALETAHRLHANVSQVCRYAVATGRAQRDVTADLRGALPPVQQEH  203
               D+L  ++ VE  G LE A RL+   + + RYAV +G  + + + ++ GA+++ +++H
Sbjct  116  KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH  175

Query  204  MAAVTDPKQVAELLRSIDGYQGTFPVLCALRLFPLLFQRPGELRAAEWSEFDLDASTWEI  263
             +A+ + K+++ELL  ID+Y G      A  L  L+F R++ELR A WSE+D++AS W I
Sbjct  176  RPAL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  264  PSER-----MKRTKQGKASGGAHIVPLSAQAVAILRDLHALTGNSRFLFPSVRTKDRPMS  318
            P+ER     +K++ +G     +H+VPLS QA+AIL+++  + G   ++F + +  ++PMS
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  319  DNTINGALRRLGYDGDT-MTGHGFRAMARTILDEVLGVPVAIVEAQLAHAVKDPLGRAY-  376
            +NT+N+ALR +GYD    + GHGFR+MA + L E    +   VE Q++H  ++++  AY 
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  377  NRTAHLPQRREMMQRWADYLD  397
            +++ HL +RR M+Q+WAD+LD
Sbjct  355  HKAEHLEERRLMLQWWADFLD  375

402) XALc_1632 in NC_013722


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  224 bits (834),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 157/386 (41%), Positives = 255/386 (67%), Gaps = 27/386 (6%)

Query  1    MRPDGARWWRWDYRRPNTGKRNTLSLGTYPDTGladardkrdaarkllaaGVDPGEQRKR  60
            ++P+G++ WR +YR    GK++ L+LG YP+  LADAR +RD ARKLLA GVDPG+++K 
Sbjct  5    VHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN  62

Query  61   AKEQAAMVAPAGETFETVARAWMARQTVARVTAEKNRWLLETF---LFPEIGSRPIGEIT  117
             K + +     + TF  VA  W +  T  + + +  +++L ++   LF+ +G R I+E+ 
Sbjct  63   DKVEQSK----ARTFKEVAIEWYG--TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  118  PRELLDALRKIEATGKLETAGRAKIKAGQVFRYAMLEGKAEIDPTASLRGALKTVKARHH  177
             R+LL +++ +E +G+LE A+R + ++  + RYA+  G  + +P+  + GA+ + + R+H
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-RQH  175

Query  178  AAVTDPVKIGQLLRAIEGFIGQPVTHAALKLAPLVFVRPGELRAAEWGEIDLDAAMWRIR  237
             +  +  +I +LL  I+++ G+P+T+ A  L+ L+F+R++ELR A W+EID++A++W I 
Sbjct  176  RPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIP  235

Query  238  PER------------MKMKAAHLVPLSSQAVAILRDLHALTGGGPHVFPGLR-PNRPMSE  284
            PER             KM+++HLVPLS QA+AIL+++  + G+   +F G + +++PMSE
Sbjct  236  PEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSE  295

Query  285  NTINSALRALGYSGD-EMTGHGFRSMAATRLNEMG-WNADAIERQLAHAETNKVREAYTH  342
            NT+NSALR +GY    E+ GHGFR+MA + L E G W+ DA+ERQ++H E N VR AY H
Sbjct  296  NTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIH  355

Query  343  AAQYLPERVRMMQAWADYLDSLRTGG  368
             A+ L ER  M+Q WAD+LD+ R  G
Sbjct  356  KAEHLEERRLMLQWWADFLDANREKG  381

403) LFML04_0012 in NC_018649


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  223 bits (832),  Expect = 8e-60, Method: Compositional matrix adjust.
 Identities = 154/361 (43%), Positives = 237/361 (66%), Gaps = 18/361 (4%)

Query  1    MGVYPETSLrearerrdeakkkieSGIDPSHARKAKKESDSGADTFETIAREWFEKFSPT  60
            +GVYPE +L +AR RRDEA+K + +G+DP++ +K  K  +S A TF  +A EW+   +  
Sbjct  28   LGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWYGT-NKK  86

Query  61   WSPSHGDRIIRRLERDIFPWLGKRSIKDIKAPEFLAVLRRIESRGAVETAHRASQNCGQV  120
            WS  H++R+++ LE ++F+ LG R+I ++K+ ++LA ++ +E  G +E A R  Q    +
Sbjct  87   WSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAI  146

Query  121  FRYAAAMGRTEGDPSGDLRGAIPPTTTKHHASITDPKEIGGLLRAIDSYEGGLVVRCALK  180
             RYA   G  + +P+ ++ GA+++   +H++++ + K I  LL  IDSY G  + R A  
Sbjct  147  MRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWATE  205

Query  181  LAPLVFVRPGELRRAEWSEIDFEKMEWRIPAEK------------MKMREQHIVPLSRQA  228
            L+ L+F+R++ELR A WSEIDFE   W IP+E+             KMR  H+VPLSRQA
Sbjct  206  LTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQA  265

Query  229  LGILRELQPLTGEGKYLFPSPRSWDRPMSENAVLAALRRMGYSGD-QMTGHGFRSMASTI  287
            L+IL++++ + G    +F + +  ++PMSEN+V +ALR MGY    ++ GHGFR+MA + 
Sbjct  266  LAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSS  325

Query  288  LIEQG-WNRDAIERQLAHAERDEIRAAYNY-AQHLPERRKMMQAWANYLDELRIDGQILP  345
            LIE G W+RDA+ERQ++H ER+ +RAAY   A+HL ERR M+Q WA++LD  R  G I P
Sbjct  326  LIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDANREKG-ISP  384

Query  346  F  346
            F
Sbjct  385  F  385

404) GM18_2884 in NC_014973


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  222 bits (828),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 153/381 (41%), Positives = 251/381 (66%), Gaps = 20/381 (5%)

Query  31   LFLLVTPSGGKLWRFKYQFGGKEKLLAFGSYPEISlaeareklaaarkQVAAGIDPSGTK  90
            + LLV P+G+K WR++Y++ GK+K+LA+G YPEI+LA+AR +   ARK +A G+DP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  91   KALKAAQVAASESAFEIVAREWHTRFLNTWTAGHAGTILKRLERDVFPWVGNRPIGEIEP  150
            K  K  Q  +   +F  VA EW     + W+ +HA  +LK LE ++F+ +G+R I+E+  
Sbjct  61   KNDKVEQ--SKARTFKEVAIEWYGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  151  PEILAVLRRVESRGALETAHRIKTICGQVFRYAVATGRATRDVAADLKGALPPAPEKHHA  210
             ++LA ++ VE  G LE A R++     + RYAV +G    + A ++ GA+++   +H++
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177

Query  211  SITDPKEVAQLLRAIQGYEGRFIVRCALRLSPLFFVRPGELRHAEWSEVDFEEALWTIPA  270
            ++ + K +++LL  I++Y GR + R A  L+ L+F+R++ELR A WSE+DFE ++WTIP+
Sbjct  178  AL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  271  ER------------MKMKASHIVPLSSQALEILKELHSFTGRGRYLFPCARSAARPMSNN  318
            ER             KM+++H+VPLS QAL ILK++  F G    +F   + + +PMS+N
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  319  AVNAALRRMGFD-KDTMTGHGFRATA-RTILDELLNIRPDYIEHQLAHAVKDPNGRAY-N  375
            +VN+ALR MG+D K  + GHGFR+ A  ++++  L  R D +E+Q++H  +++   AY +
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSR-DAVERQMSHMERNSVRAAYIH  355

Query  376  RTAHLAERRKMMQTWADYLDG  396
            ++ HL ERR M+Q WAD+LD+
Sbjct  356  KAEHLEERRLMLQWWADFLDA  376

405) A11S_1005 in NC_020812


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  219 bits (815),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 156/387 (41%), Positives = 243/387 (63%), Gaps = 21/387 (5%)

Query  26   LYLEITPKGSKLWRMKYRYGGKEKRLALGQYPEVSLADARDGRDKARKLLAEHNDPSLAK  85
            + L + P+GSK WR++YRY GK+K LALG YPE++LADAR  RD ARKLLA+  DP+  K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   QEKKRLAQASAANTFEALALEWHEKNKGNWSPNHASTVLRRLEQDLFPAIGNLPIKEITT  145
            ++ K   + S A TF  +A+EW   NK +WS +HA  VL+ LE++LF+A+G+  I E+ T
Sbjct  61   KNDK--VEQSKARTFKEVAIEWYGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PRLAIVIENIEKRGAYDIARRALQYSRAIFAYAQLRGKIDTNPADIKAKDFLAPIKQGHY  205
              L   I  +E  G  ++A R  Q + AI  YA   G ID NPA+  A   +A+ ++ H 
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA-VASCNRQHR  176

Query  206  AAMEAKDLPEFLSKLYSNEARLFISTQLALEMMLLTFVRTSELIKARWDEFDFEKRQWII  265
            +A+E K +PE+L+K+ S  +R +  T+ A E+ LL F+R+SEL  ARW E+DFE   W I
Sbjct  177  PALELKRIPELLTKIDSYTGRPL--TRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  266  PAER------------MKMNRDHIVPLSKQVLRILEQLKPISEHREFLFPGQRNPKTHMS  313
            P+ER             KM   H+VPLS+Q L IL Q+K +   ++++F G++++   MS
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  314  NGAILMALKRMGYHG--IHTGHGFRALAMTTIMEELGYPHEVPDTQLAHAKGDSVRRAY-  370
            + ++  AL+ MGY+      GHGFR++A ++++E    +++  + Q++H   +SVR AY 
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  371  DRTKFLAQRKKMMQEWADYIENISHKN  397
            +++  L +R+ M+Q WAD+++   +K 
Sbjct  355  HKAEHLEERRLMLQWWADFLDANREKG  381

406) XCV2217 in NC_007508


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  218 bits (812),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 164/391 (42%), Positives = 266/391 (69%), Gaps = 28/391 (7%)

Query  26   LYLLMRPDGARWWRWDYRRPVTGKRNTLSLGTYPDTGladarekrdaarkllaaGVDPGE  85
            + LL++P+G++ WR +YR    GK++ L+LG YP+  LADAR +RD ARKLLA GVDPG+
Sbjct  1    MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD  58

Query  86   QRKQAKQERAALVDAAGETFEVVAREWMARQTVARVTAEKNRWLLETF---LFPEIGSRP  142
            ++K+ K E     ++ + TF  VA EW +  T  + + +  +++L ++   LF+ +G R 
Sbjct  59   KKKNDKVE-----QSKARTFKEVAIEWYG--TNKKWSEDHAHRVLKSLEDNLFAALGERN  111

Query  143  IGEITPRELLDALRKIEATGKLETAARAKIKAGQVFRYAMLEGKAEIDPTaslrgalkaa  202
            I+E+  R+LL +++ +E +G+LE AAR + ++  + RYA+  G  + +P+  + GA+ + 
Sbjct  112  IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC  171

Query  203  karhhaaVTEPAKIGQLLRAIEGFSGQPVTHAALKLAPLVFVRPGELRAAEWAEIDLDAA  262
            + +H++A+ E  +I +LL  I++++G+P+T+ A  L+ L+F+R++ELR A W+EID++A+
Sbjct  172  NRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEAS  230

Query  263  MWRIRPER------------MKMKAAHLVPLSSQAVAILRDLHALTGGGHHVFPGLR-PN  309
            +W I PER             KM+++HLVPLS QA+AIL+++  + G+ + +F G + ++
Sbjct  231  IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSH  290

Query  310  RPMSENTVNAALRALGYSGD-EMTGHGFRSMAATRLNELG-WNADAVERQLAHAETNKVR  367
            +PMSENTVN+ALR +GY    E+ GHGFR+MA + L E G W+ DAVERQ++H E N VR
Sbjct  291  KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVR  350

Query  368  EAYTHAAQYLHERVRMMQAWADYLDGLRSVG  398
             AY H A+ L+ER  M+Q WAD+LD+ R  G
Sbjct  351  AAYIHKAEHLEERRLMLQWWADFLDANREKG  381

407) AvCA6_40500 in NC_021150


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  212 bits (790),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 152/377 (41%), Positives = 239/377 (64%), Gaps = 19/377 (5%)

Query  28   LEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVTLQKARQLRDAARQLLAEGKDPSAERKA  87
            L V P GSK WR +YR++G+ KMLALGVYP +TL  AR  RD AR+LLA+G DP +++K 
Sbjct  3    LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-GDKKK  61

Query  88   EQEAQQSDGLTFETLAREWHAYRAPRWAKSTADKTAAYLESDLLPVLGKRPVKAITRPEL  147
            ++  +QS + TF  +A EW +    +W+   A++    LE +L++ LG R +  +   +L
Sbjct  62   NDKVEQSKARTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  148  VELLHGIEDRGAHNVAKKCRQWLSQIFRFGLAKGSVDANPATDLDvvaahapatrhhphv  207
            +  + ++E  G  +VA + +Q+ + I R+++  G +D NPA ++   A  +   +H+P +
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPAL  179

Query  208  tFAELPELLGKIEGASINVLTRHAIRLLVLTGVRPGELRAAPWSEFDLKAAVWTIPKER-  266
             +  +PELL KI++ +   LTR A  L +L  +R++ELR A WSE+D+ A++WTIP ER 
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  267  -----------MKARRPHIVPLPRQAMAILRELQEITGAYELVFAGRNNSARPMSENTVN  315
                        K R  H+VPL+RQA+AIL++++++ GA +L+F G ++S +PMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  316  KALADAGYRGRQT--GHGFRHLLSTELNSRGY-NRDWIERQLAHGDQDEMRDTYNH-ATY  371
             AL   GY  +    GHGFR +  + L   G  +RD +ERQ++H +++ +R +Y H A  
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  372  LEQRRDMMQAWADSIDA  388
            LE+RR M+Q WAD +DA
Sbjct  360  LEERRLMLQWWADFLDA  376

408) AvCA_40500 in NC_021149


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  212 bits (790),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 152/377 (41%), Positives = 239/377 (64%), Gaps = 19/377 (5%)

Query  28   LEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVTLQKARQLRDAARQLLAEGKDPSAERKA  87
            L V P GSK WR +YR++G+ KMLALGVYP +TL  AR  RD AR+LLA+G DP +++K 
Sbjct  3    LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-GDKKK  61

Query  88   EQEAQQSDGLTFETLAREWHAYRAPRWAKSTADKTAAYLESDLLPVLGKRPVKAITRPEL  147
            ++  +QS + TF  +A EW +    +W+   A++    LE +L++ LG R +  +   +L
Sbjct  62   NDKVEQSKARTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  148  VELLHGIEDRGAHNVAKKCRQWLSQIFRFGLAKGSVDANPATDLDvvaahapatrhhphv  207
            +  + ++E  G  +VA + +Q+ + I R+++  G +D NPA ++   A  +   +H+P +
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPAL  179

Query  208  tFAELPELLGKIEGASINVLTRHAIRLLVLTGVRPGELRAAPWSEFDLKAAVWTIPKER-  266
             +  +PELL KI++ +   LTR A  L +L  +R++ELR A WSE+D+ A++WTIP ER 
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  267  -----------MKARRPHIVPLPRQAMAILRELQEITGAYELVFAGRNNSARPMSENTVN  315
                        K R  H+VPL+RQA+AIL++++++ GA +L+F G ++S +PMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  316  KALADAGYRGRQT--GHGFRHLLSTELNSRGY-NRDWIERQLAHGDQDEMRDTYNH-ATY  371
             AL   GY  +    GHGFR +  + L   G  +RD +ERQ++H +++ +R +Y H A  
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  372  LEQRRDMMQAWADSIDA  388
            LE+RR M+Q WAD +DA
Sbjct  360  LEERRLMLQWWADFLDA  376

409) Avin_40500 in NC_012560


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  212 bits (790),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 152/377 (41%), Positives = 239/377 (64%), Gaps = 19/377 (5%)

Query  28   LEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVTLQKARQLRDAARQLLAEGKDPSAERKA  87
            L V P GSK WR +YR++G+ KMLALGVYP +TL  AR  RD AR+LLA+G DP +++K 
Sbjct  3    LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-GDKKK  61

Query  88   EQEAQQSDGLTFETLAREWHAYRAPRWAKSTADKTAAYLESDLLPVLGKRPVKAITRPEL  147
            ++  +QS + TF  +A EW +    +W+   A++    LE +L++ LG R +  +   +L
Sbjct  62   NDKVEQSKARTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL  120

Query  148  VELLHGIEDRGAHNVAKKCRQWLSQIFRFGLAKGSVDANPATDLDvvaahapatrhhphv  207
            +  + ++E  G  +VA + +Q+ + I R+++  G +D NPA ++   A  +   +H+P +
Sbjct  121  LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPAL  179

Query  208  tFAELPELLGKIEGASINVLTRHAIRLLVLTGVRPGELRAAPWSEFDLKAAVWTIPKER-  266
             +  +PELL KI++ +   LTR A  L +L  +R++ELR A WSE+D+ A++WTIP ER 
Sbjct  180  ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE  239

Query  267  -----------MKARRPHIVPLPRQAMAILRELQEITGAYELVFAGRNNSARPMSENTVN  315
                        K R  H+VPL+RQA+AIL++++++ GA +L+F G ++S +PMSENTVN
Sbjct  240  PIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENTVN  299

Query  316  KALADAGYRGRQT--GHGFRHLLSTELNSRGY-NRDWIERQLAHGDQDEMRDTYNH-ATY  371
             AL   GY  +    GHGFR +  + L   G  +RD +ERQ++H +++ +R +Y H A  
Sbjct  300  SALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEH  359

Query  372  LEQRRDMMQAWADSIDA  388
            LE+RR M+Q WAD +DA
Sbjct  360  LEERRLMLQWWADFLDA  376

410) Tbd_2005 in NC_007404


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  212 bits (789),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 153/380 (41%), Positives = 243/380 (64%), Gaps = 22/380 (5%)

Query  42   LYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDVSLararqkrddaraMLADGTDPGEQR  100
            + LLV+  G KYWR++YR+ GK+K LALGVY++++LA AR +RD+AR +LA+G DPG+++
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  101  KETKRANQAAQANSFEAVAREWHAMKLKRKWTQSTADKTMAQLEAYVFPEMGHLPIASVK  160
            K+ K   + ++A +F  VA EW + +  +KW++  A++ +  LE  +F+ +G+  IA +K
Sbjct  61   KNDK--VEQSKARTFKEVAIEWYGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAELK  116

Query  161  ASQLLAMLRKVENRGIAYTAVRLREVCGQIFRYGVATGRAEDNPAAHLLGALHKPEVNHR  220
            + +LLA ++ VE  G    A RL++    I RY+V +G  + NPA ++ GA+   + +HR
Sbjct  117  TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR  176

Query  221  PAITDRRGFGAFLRDLREATGYDAVTRHAAYFALLTFVRAQEFRYAKWEEIDWQAKEWKV  280
            PA+  +R +  +L  +   TG  ++TR A+ ++LL F+R+ E+R+A+W EID +A  W +
Sbjct  177  PALELKR-IPELLTKIDSYTG-RPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  281  PAKR---------MKTGKALPAHTVPLSQQALALLTELKNLTGHSPYLFPKVKGYGDAEV  331
            P+ R          + +K   +H VPLS+QALA+L ++K++ G    +F  +   +    
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIF--IGNHDSHKP  292

Query  332  ISENTVGKMLNKMGYQGR--QCVHGFRASARSILSEQG-WSREAMERQLDHKETDSTVAA  388
            +SENTV   L  MGY+ +   C HGFR+ A S L E G WSR+A+ERQ+ H E +S  AA
Sbjct  293  MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAA  352

Query  389  YA-RSEHLPERRNMMQAWAD  407
            Y  ++EHL ERR M+Q WAD
Sbjct  353  YIHKAEHLEERRLMLQWWAD  372

411) Bcep1808_2451 in NC_009256


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  210 bits (781),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 165/382 (44%), Positives = 242/382 (64%), Gaps = 23/382 (6%)

Query  26   LLLLITPAGGKRWIFKYRIDGKEKSLALGTYPDVSLaeararrdsareKLAAGVDPSEak  85
            + LL+ P G+K W ++YR +GK+K LALG YP+++LA+AR RRD AR  LA GVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kadkraaqlaaaSSFEIVAREWFETQRGGWSEVYAGKVINCLEVDVFPRLGARPIANIDA  145
            K DK     A   +F  VA EW+ T++  WSE  A +V++ LE ++F+ LG R IA++ +
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PELLAIIRAVESRGVRETAKRVLQRSRAVFQYGIMTGRCSRNPAADIDAETVLKKSTGVQ  205
             +LLA I+AVE  G  E A R+ QR+ A+ +Y++ +G    NPA ++ +      S   Q
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA---SCNRQ  174

Query  206  HMARVKVTEIPQLMRDIDEYSGDLVTRLALRFMALTFVRTKEMIQAEWHEIDVGAAEWRV  265
            H + + +  IP+L+  ID Y+G  +TR A  +  L F+R+ E+  A W EID  A+ W +
Sbjct  175  HRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  266  PAER------------MKMRDPHIVPLSRQALDVLAQLREINGQRRFVFYSVQ-GRSHIS  312
            P+ER             KMR  H+VPLSRQAL +L Q++++ G + ++F + + ++  +S
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  313  NNTMLYALYRMGYKSRMT--GHGFRGLAATTLRELG-YSRDVVERQMAHAERNQVTAAYV  369
            +NT+  AL  MGY +++   GHGFR +A ++L E G  SRD VERQM+H ERN V AAY+
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  370  H-AEYLPERRKMMQHWADHLDE  390
            H AE L ERR M+Q WAD LD 
Sbjct  355  HKAEHLEERRLMLQWWADFLDA  376

412) Bamb_2400 in NC_008390


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  209 bits (777),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 166/397 (42%), Positives = 250/397 (63%), Gaps = 24/397 (6%)

Query  26   LLLLITPAGGKRWVLKYRVDSKEKSLALGTYPDVSLaeararrdnareKLAAGVDPSEak  85
            + LL+ P G+K W L+YR ++K+K LALG YP+++LA+AR RRD+AR  LA GVDP++ K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kadkraaqlaaaSSFEIVAREWFDTQRGGWSEVYAGKVISCLEVDVFPRLGARPIASIDA  145
            K DK     A   +F  VA EW++T++  WSE  A +V+  LE ++F+ LG R IA + +
Sbjct  61   KNDKVEQSKA--RTFKEVAIEWYGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PELLAIIRTVESRGVRETAKRVLQRSRAVFQYGIMTGRCARNPAADIDAETVLKKSTGVQ  205
             +LLA I++VE  G  E A R+ QR+ A+ +Y++ +G    NPA ++ +      S   Q
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA---SCNRQ  174

Query  206  HMARVKATEIPRLMRDIDEYSGDLVTRLALRFMALTFVRTKEMIQAEWPEIDVDAAEWRV  265
            H + +    IP L+  ID Y+G  +TR A  +  L F+R+ E+  A W+EID +A+ W +
Sbjct  175  HRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTI  234

Query  266  PAER------------MKMRDPHIVPLSRQALGVLAQLREINGQQRFVFYSVQ-GRSHIS  312
            P+ER             KMR  H+VPLSRQAL++L Q++++ G + ++F + + ++  +S
Sbjct  235  PPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMS  294

Query  313  NNTMLYALYRMGYKSRMT--GHGFRGLAATALRELG-YSRDVVERQMAHAERNQVTAAYV  369
            +NT+  AL  MGY +++   GHGFR +A ++L E G  SRD VERQM+H ERN V AAY+
Sbjct  295  ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYI  354

Query  370  H-AEYLPERREMMQHWADRLDELRA-GAAILSFPSLA  404
            H AE L ERR M+Q WAD LD  R  G + + ++ + 
Sbjct  355  HKAEHLEERRLMLQWWADFLDANREKGISPFEYAKIN  391

413) NCGM2_0360 in NC_017549


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  205 bits (761),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 153/379 (41%), Positives = 250/379 (66%), Gaps = 19/379 (5%)

Query  26   LYLLVNPNGSKLWRLKYRVGGKEKGLAFGAYPTVTLqqarqrrdearqqlaqGEDPGeqk  85
            + LLV+PNGSK WRL+YR  GK+K LA+G YP +TL +AR RRDEAR+ LA+G DPG++K
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60

Query  86   kaskqakkvseLTFETLAREWYAYNAPRWAESTAYKAKLYLENDLIPGIGSRPIAAITRP  145
            K  K  +  +  TF  +A EWY+    +W+E  A +    LE++L++++G R IA +   
Sbjct  61   KNDKVEQSKAR-TFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR  118

Query  146  DLVDLVRKVEARGTLNAAGKIRQWLHQIYRYALAKGVVESNPATDLDVVaapakaarhhp  205
            DL+  ++ VE  G L+ A++++Q+   I RYA+  G+++ NPA ++    A+ +  ++ +
Sbjct  119  DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA  178

Query  206  hlpFAELPELLEKLATAKLHTLTRSAIRLLMLTAVRPGELRAAPWCEFDLDTATWTIPAA  265
               +  +PELL K+ +   + LTR A  L +L  +R++ELR A W E+D++++ WTIP+ 
Sbjct  179  LE-LKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237

Query  266  R------------MKARRSHVVPLPRQAVTILRQLHELTGSYSLLFPGQQNAERPMSENT  313
            R             K R +H+VPL+RQA++IL+Q+ ++ G+  L+F G++++++PMSENT
Sbjct  238  REPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSENT  297

Query  314  INKALRLVGYGGRQT--GHGFRHLLSTELNSRGY-NRDWIERQLAHGDKDEIRGTYNH-A  369
            +N ALR++GY+ +    GHGFR +  + L   G  +RD +ERQ++H +++ +R++Y H A
Sbjct  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKA  357

Query  370  TYLEQRRGMMQAWADSIDA  388
              LE+RR M+Q WAD +DA
Sbjct  358  EHLEERRLMLQWWADFLDA  376

414) Msil_1557 in NC_011666


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  204 bits (757),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 153/379 (41%), Positives = 244/379 (65%), Gaps = 24/379 (6%)

Query  26   LQLWLMPDGAKRWRLAYRFAGGQKLLAIGVYPAIGLrearearegaKRILAEGNDPslak  85
            ++L + P+G+K WRL YR+ G QK+LA+GVYP I L +AR  R+ A+++LA+G DP  + 
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP--GD  58

Query  86   klakaakatasaNTFDAVSTE--LLDKKRREGKAERTLDKL-GWLFSLARPAIGVRPIAE  142
            K  +     + A TF  V+ E    +KK+ E+ A+R L  L + LF+    A+G R IAE
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYGTNKKWSEDHAHRVLKSLEDNLFA----ALGERNIAE  114

Query  143  ISAREILAVLRSVESRGTHETAKRLRATISEVFRYAVATDRADSDPTVALKGALAAPIVK  202
            + +R++LA +++VE  G  E A RL+   + + RYAV ++  D +P+  + GA+A+   +
Sbjct  115  LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ  174

Query  203  HRAAIIEPKAFGGLLRAIATYEGSPETCaalellalTFVRPGELRAAEWVEFDFDNGVWS  262
            HR+A +E K +  LL  I +Y G P T  A EL  L F+R++ELR A W E+DF+ ++W+
Sbjct  175  HRPA-LELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWT  233

Query  263  IPGEK------------MKMKRPHRVPLAARAVGLLQELQTITGHGKFLFPSVRSAARCM  310
            IP E+             KM+  H VPL+ +A+++L++++ + G   ++F + + + + M
Sbjct  234  IPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPM  293

Query  311  SENTINAALRRLGFE-KDEMTGHGFRSAASSMLNESGLWNPDAIERQLAHVDNDSVRRAY  369
            SENT+N+ALR +G++ K E+ GHGFR+ A S L ESGLW+ DA+ERQ++H++ +SVR AY
Sbjct  294  SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAY  353

Query  370  A-RADYWDERIRMMSWWAD  387
              +A+  +ER  M+ WWAD
Sbjct  354  IHKAEHLEERRLMLQWWAD  372

415) AMEC673_10230 in NC_018678


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  198 bits (734),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 119/282 (43%), Positives = 185/282 (66%), Gaps = 19/282 (6%)

Query  5    LKDNSFASLGKRPISTIRPRDVIETVRDIEKRGALDVAQRVLQDIGRVCRYAVQIERINF  64
            L DN FA+LG R I+ ++ RD++  ++ +E  G L+VA R+ Q    + RYAVQ   I++
Sbjct  99   LEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY  158

Query  65   NPASELSDVLKSRKVEHRASLPREQLPAFVKALSTYEEKGRLLTKYAIQLLVLTFVRPGE  124
            NPA E+++ + S + +HR++L   ++P ++  + +Y   GR LT+ A +L +L F+R++E
Sbjct  159  NPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSY--TGRPLTRWATELTLLIFIRSSE  216

Query  125  LRGARWEEFNFEENIWRIPAER------------MKMRSEHIVPLSKQAIEVIDRIRSIT  172
            LR ARW E++FE +IW IP+ER             KMR+ H+VPLS+QA+ ++ +I+ + 
Sbjct  217  LRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFC  276

Query  173  HQYSLLFPSERDRNEPMSDNTMRRAIFKMGYDGTKPGKAKANPHGFRATASSILNEQGF-  231
                L+F +++D + PMS+NT+  A+  MGYD     K     HGFR+ A S L E G+ 
Sbjct  277  GAHDLIFIGNHDSHKPMSENTVNSALRVMGYD----TKVEVCGHGFRTMACSSLIESGLW  332

Query  232  NPDAIERQLSHMERNGVRAAYTHHARYLDERKNMMQWWADYV  273
            + DA+ERQ+SHMERN+VRAAY H A  L+ER+ M+QWWAD++
Sbjct  333  SRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFL  374

416) NAL212_2545 in NC_015222


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  197 bits (731),  Expect = 9e-52, Method: Compositional matrix adjust.
 Identities = 157/387 (41%), Positives = 246/387 (64%), Gaps = 20/387 (5%)

Query  26   MYIEVKPNGAKYWRMAYRFADKQKTLALGVYPDVTLADARDRRNEARKLLANGADPGAVk  85
            M + V PNG+KYWR+ YR+ +KQK LALGVYP++TLADAR RR+EARKLLANG DPG   
Sbjct  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD--  58

Query  86   qsqkkqakiaasnsFELIAREFHSLKTPMWSTNHAADWIKTLEREIFPKFGNYPISEIDA  145
            + ++ +   + + +F  +A E  +     WS +HA   +K+LE ++F+ +G+  I+E+ +
Sbjct  59   KKKNDKVEQSKARTFKEVAIEWYG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117

Query  146  PAVLDAIRAIESRDAHEvaarvlqrvravcaYAIATGRARHNPASEIKGALAPQPKIKHF  205
              +L +I+A+E  +  EVAAR+ QR  A+  YA+ +G    NPA E+ GA+A+  + +H 
Sbjct  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHR  176

Query  206  AALTEKELPDFLRAVAAYPCYPLTKYATALLMLTFVRTGEVRGAKWCEFDLDAKLWKIPA  265
            +AL  K +P++L  + +Y   PLT+ AT L +L F+R++E+R A+W E+D++A +W IP+
Sbjct  177  PALELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFEASIWTIPP  236

Query  266  ER------------MKSREPHIVPLAKQAIEILGELHPLTGHGEHLFPNRTGNGKVISEN  313
            ER             K R  H+VPL++QA+ IL ++  + G  + +F    ++ K +SEN
Sbjct  237  EREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFIGNHDSHKPMSEN  296

Query  314  TVLKVIERLGYKGRMT--GHGFRTIASTYLNGVGMIRPDVIEAQLAHTEanatraa-ynr  370
            TV   +  +GY  ++   GHGFRT+A + L   G+   D +E Q++H E N+ RAA  ++
Sbjct  297  TVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHK  356

Query  371  anyMEYRAAMMQFWADTLDA-MEAGIT  396
            A+ +E R  M+Q WAD LDA  E GI+
Sbjct  357  AEHLEERRLMLQWWADFLDANREKGIS  383

417) A1S_2908 in NC_009085


> AJ494981|2|G1|23954220|CAD42017.1|Escherichia_coli_536|+|416..1603|intB|-|bacteriophage 
P4 integrase
Length=395

 Score =  193 bits (716),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 142/346 (42%), Positives = 226/346 (66%), Gaps = 7/346 (2%)

Query  1    MIAEGVDPKEQLSILLAKKNNVNTLENVVRVWLDAYAVRKPLSEDTKNKQLRKFENHLFP  60
            ++A+GVDP ++       +++  T+ +V   W   Y+  K  SED  ++ L+ +E++LF+
Sbjct  49   LLANGVDPGDKKKNDKVEQSKARTFKEVAIEW---YGTNKKWSEDHAHRVLKSLEDNLFA  105

Query  61   KFKDKAIEQITLRDLKDALNVIYDHSP-DNAQRIRASLIQVYSYAVQHSYIQTNIARDLE  119
             + ++ I ++  RDL  +++ +   +  + A R++     +  YAVQ + I+ N A+++ 
Sbjct  106  ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA  165

Query  120  DMDLSARKNHRATFRSLDLIPQLIRRIKADSGNPltklclllglhtflRSSEIRFARWNE  179
            +   S  ++HR+++  L  IP+L+ +I + +G PLT+    L L  F+RSSE+RFARW+E
Sbjct  166  GAVASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWATELTLLIFIRSSELRFARWSE  224

Query  180  IDFEAEIWRIPPRRRLIEGVKHSDRGAKMKEEHLVPLSKQSIEILEKVYQYSGDCDFVFP  239
            IDFEA IW IPP R  I GVKHS+RG+KM+  HLVPLS+Q++ IL ++ Q+ G  D++F 
Sbjct  225  IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQIKQFCGAHDLIFI  284

Query  240  SLNNKRIFISENTPNDALRRMGY-TKEEISFHGFRALARSALGEMSIFSRDALEKQMSHQ  298
            + ++ +  +SENT N ALR MGY TK E+  HGFR++A S+L E ++ SRDA+E+QMSH 
Sbjct  285  GNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSRDAVERQMSHM  344

Query  299  ERNETVGAYTHIAEYLEEREKIMQIWSDWLSAIENGDYISPHEYGR  344
            ERN   +AY H AE LEER  ++Q W+D L A  + + ISP EY++
Sbjct  345  ERNSVRAAYIHKAEHLEERRLMLQWWADFLDANREKG-ISPFEYAK  389