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PAthogenisity Island DataBase (PAI DB)

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Homologs of inlA gene of AJ012346

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) inlA
( YP_006672275.1 )

internalin A

NC_018584
(Listeria monocytogenes ATCC 19117)

0.0

2) inlA
( YP_013078.1 )

internalin A

NC_002973
(Listeria monocytogenes F2365)

0.0

3) LM220_06132
( YP_008288658.1 )

internalin

NC_021830
(Listeria monocytogenes J1-220)

0.0

4) M638_13120
( YP_008279234.1 )

internalin

NC_021825
(Listeria monocytogenes J2-1091)

0.0

5) inlA_6
( YP_007014043.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

0.0

6) inlA
( YP_006675135.1 )

internalin A

NC_018585
(Listeria monocytogenes SLCC2378)

0.0

7) LMHCC_2195
( YP_002351147.1 )

internalin-A

NC_011660
(Listeria monocytogenes HCC23)

0.0

8) inlA
( YP_005925444.1 )

internalin A

NC_017529
(Listeria monocytogenes L99)

0.0

9) inlA
( YP_005946531.1 )

internalin A

NC_017537
(Listeria monocytogenes M7)

0.0

10) inlA
( YP_006689630.1 )

internalin A

NC_018590
(Listeria monocytogenes SLCC2376)

0.0

11) inlA
( NP_463962.1 )

internalin A

NC_003210
(Listeria monocytogenes EGD-e)

0.0

100

12) LMKG_01477
( YP_005967350.1 )

internalin-A

NC_017546
(Listeria monocytogenes FSL R2-561)

0.0

100

13) inlA
( YP_006683764.1 )

internalin A

NC_018588
(Listeria monocytogenes SLCC2372)

0.0

100

14) M642_14825
( YP_008273742.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

0.0

15) LMLG_1991
( YP_005970265.1 )

internalin A

NC_017547
(Listeria monocytogenes Finland 1988)

0.0

16) inlA
( YP_006698115.1 )

internalin A

NC_018593
(Listeria monocytogenes SLCC7179)

0.0

17) inlA
( YP_003412585.1 )

Internalin A

NC_013766
(Listeria monocytogenes 08-5578)

0.0

18) inlA
( YP_003415674.1 )

Internalin A

NC_013768
(Listeria monocytogenes 08-5923)

0.0

19) LMOG_02646
( YP_005964423.1 )

internalin A

NC_017545
(Listeria monocytogenes J0161)

0.0

20) LMRG_00126
( YP_005961575.1 )

internalin A

NC_017544
(Listeria monocytogenes 10403S)

0.0

21) inlA
( YP_006695263.1 )

internalin A

NC_018592
(Listeria monocytogenes SLCC5850)

0.0

22) M637_04850
( YP_008274774.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

0.0

23) M643_12500
( YP_008282004.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

0.0

24) M641_11645
( YP_008299830.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

0.0

25) inlA
( YP_006692391.1 )

internalin A

NC_018591
(Listeria monocytogenes SLCC2482)

0.0

26) inlA
( YP_006677996.1 )

internalin A

NC_018586
(Listeria monocytogenes SLCC2540)

0.0

27) inlA
( YP_006680889.1 )

internalin A

NC_018587
(Listeria monocytogenes SLCC2755)

0.0

28) MUO_02455
( YP_006204706.1 )

internalin A

NC_017728
(Listeria monocytogenes 07PF0776)

0.0

29) inlA
( YP_002757172.1 )

Internalin A

NC_012488
(Listeria monocytogenes Clip81459)

0.0

30) inlA
( YP_006753578.1 )

internalin A (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

0.0

31) M639_00345
( YP_008294718.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

0.0

32) M640_01170
( YP_008300788.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

0.0

33) LM1816_01762
( YP_008286260.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

0.0

34) M644_13770
( YP_008285336.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

0.0

35) M645_01700
( YP_008303780.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

0.0

36) LIV_0353
( YP_004854169.1 )

putative internalin A

NC_016011
(Listeria ivanovii PAM 55)

0.0

37) LM5578_0443
( YP_003412561.1 )

hypothetical protein

NC_013766
(Listeria monocytogenes 08-5578)

1e-148

38) LM5923_0442
( YP_003415650.1 )

hypothetical protein

NC_013768
(Listeria monocytogenes 08-5923)

1e-148

39) lin0372
( NP_469717.1 )

cell surface protein

NC_003212
(Listeria innocua Clip11262)

2e-146

40) M639_00460
( YP_008294741.1 )

internalin F

NC_021837
(Listeria monocytogenes J2-031)

1e-145

41) LMRG_00102
( YP_005961553.1 )

internalin

NC_017544
(Listeria monocytogenes 10403S)

8e-145

42) inlF
( YP_006695239.1 )

internalin F

NC_018592
(Listeria monocytogenes SLCC5850)

8e-145

43) lmo0409
( NP_463939.1 )

hypothetical protein

NC_003210
(Listeria monocytogenes EGD-e)

9e-145

44) LMKG_01500
( YP_005967327.1 )

internalin F

NC_017546
(Listeria monocytogenes FSL R2-561)

9e-145

45) inlF
( YP_006683740.1 )

internalin F

NC_018588
(Listeria monocytogenes SLCC2372)

9e-145

46) inlF
( YP_006686674.1 )

internalin F

NC_018589
(Listeria monocytogenes SLCC2479)

9e-145

47) M642_14710
( YP_008273719.1 )

internalin F

NC_021823
(Listeria monocytogenes C1-387)

2e-144

48) inlF
( YP_006698090.1 )

internalin F

NC_018593
(Listeria monocytogenes SLCC7179)

3e-144

49) inlF
( YP_006672238.1 )

internalin F

NC_018584
(Listeria monocytogenes ATCC 19117)

1e-136

50) LM220_05422
( YP_008288619.1 )

internalin F

NC_021830
(Listeria monocytogenes J1-220)

1e-136

51) M640_01000
( YP_008300754.1 )

internalin F

NC_021839
(Listeria monocytogenes J1776)

1e-136

52) LM1816_01587
( YP_008286292.1 )

internalin F

NC_021829
(Listeria monocytogenes J1816)

1e-136

53) M644_13940
( YP_008285369.1 )

internalin F

NC_021827
(Listeria monocytogenes J1817)

1e-136

54) M645_01530
( YP_008303746.1 )

internalin F

NC_021840
(Listeria monocytogenes J1926)

1e-136

55) M643_12400
( YP_008281984.1 )

internalin F

NC_021826
(Listeria monocytogenes N1-011A)

2e-136

56) M641_11745
( YP_008299849.1 )

internalin F

NC_021838
(Listeria monocytogenes R2-502)

2e-136

57) inlF
( YP_006692370.1 )

internalin F

NC_018591
(Listeria monocytogenes SLCC2482)

2e-136

58) inlF
( YP_006680867.1 )

internalin F

NC_018587
(Listeria monocytogenes SLCC2755)

2e-136

59) MUO_02260
( YP_006204671.1 )

internalin, peptidoglycan bound protein (LPXTG motif)

NC_017728
(Listeria monocytogenes 07PF0776)

2e-136

60) inlF
( YP_002757146.1 )

internalin, peptidoglycan bound protein (LPXTG motif)

NC_012488
(Listeria monocytogenes Clip81459)

2e-136

61) inlF
( YP_006753549.1 )

internalin F (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

2e-136

62) inlF
( YP_006677974.1 )

internalin F

NC_018586
(Listeria monocytogenes SLCC2540)

4e-136

63) M637_04750
( YP_008274754.1 )

internalin F

NC_021824
(Listeria monocytogenes J2-064)

5e-136

64) inlF
( YP_013036.1 )

internalin

NC_002973
(Listeria monocytogenes F2365)

6e-136

65) M638_13315
( YP_008279273.1 )

internalin F

NC_021825
(Listeria monocytogenes J2-1091)

6e-136

66) inlA_5
( YP_007014002.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

6e-136

67) inlF
( YP_006675098.1 )

internalin F

NC_018585
(Listeria monocytogenes SLCC2378)

6e-136

68) LMLG_2940
( YP_005970242.1 )

internalin

NC_017547
(Listeria monocytogenes Finland 1988)

3e-125

• Sequence Alignments

1) inlA in NC_018584


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1057 bits (4008),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 782/800 (98%), Positives = 796/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

2) LM220_06132 in NC_021830


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1057 bits (4008),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 782/800 (98%), Positives = 796/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

3) inlA in NC_002973


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1057 bits (4008),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 782/800 (98%), Positives = 796/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

4) inlA_6 in NC_019556


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1057 bits (4008),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 782/800 (98%), Positives = 796/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

5) inlA in NC_018585


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1057 bits (4008),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 782/800 (98%), Positives = 796/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

6) M638_13120 in NC_021825


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1057 bits (4008),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 782/800 (98%), Positives = 796/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

7) LMHCC_2195 in NC_011660


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1056 bits (4004),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 798/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVLGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILV+GSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLASLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLA+LTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttSPSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTT+PSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

8) inlA in NC_017537


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1056 bits (4004),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 798/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVLGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILV+GSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLASLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLA+LTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttSPSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTT+PSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

9) inlA in NC_017529


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1056 bits (4004),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 798/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVLGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILV+GSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLASLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLA+LTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttSPSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTT+PSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

10) inlA in NC_018590


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1056 bits (4005),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 778/800 (98%), Positives = 796/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVLGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILV+GSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANL+NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYAFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSY+F+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFNINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQF+INSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTMTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+ TQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

11) inlA in NC_003210


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1035 bits (3924),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 800/800 (100%), Positives = 800/800 (100%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

12) LMKG_01477 in NC_017546


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1035 bits (3924),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 800/800 (100%), Positives = 800/800 (100%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

13) inlA in NC_018588


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1035 bits (3924),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 800/800 (100%), Positives = 800/800 (100%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

14) LMLG_1991 in NC_017547


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1032 bits (3911),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 793/800 (99%), Positives = 800/800 (100%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTD+ALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD+DPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWDFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKW+FSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFD+DGK+TTQ+VDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

15) M642_14825 in NC_021823


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1032 bits (3911),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 793/800 (99%), Positives = 800/800 (100%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTD+ALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD+DPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWDFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKW+FSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFD+DGK+TTQ+VDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

16) inlA in NC_018593


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1031 bits (3907),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 792/800 (99%), Positives = 800/800 (100%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTD+ALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD+DPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGY  600
            GGTKWNFSTDKMPTNDINLYAQFSINSYTATF+NDGVTTSQTVDYQGLLQEPT+PTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFD+DGK+TTQ+VDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKDASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSK+ASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

17) inlA in NC_013768


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1030 bits (3903),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 793/800 (99%), Positives = 799/800 (99%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTPPTKEGY  600
            GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPT+PTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

18) inlA in NC_013766


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1030 bits (3903),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 793/800 (99%), Positives = 799/800 (99%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTPPTKEGY  600
            GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPT+PTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

19) LMOG_02646 in NC_017545


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1029 bits (3901),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 792/800 (99%), Positives = 799/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTD+ALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD+DPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATF+NDGVTTSQTVDYQGLLQEPT+PTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKDASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSK+ASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

20) LMRG_00126 in NC_017544


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1028 bits (3897),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 792/800 (99%), Positives = 799/800 (99%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTD+ALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGY  600
            GGTKWNFSTDKMPTNDINLYAQFSINSYTATF+NDGVTTSQTVDYQGLLQEPT+PTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

21) inlA in NC_018592


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1028 bits (3897),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 792/800 (99%), Positives = 799/800 (99%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTD+ALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFSQPVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTFSQPVTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGY  600
            GGTKWNFSTDKMPTNDINLYAQFSINSYTATF+NDGVTTSQTVDYQGLLQEPT+PTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

22) inlA in NC_018587


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1024 bits (3882),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKAASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSK ASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

23) inlA in NC_018591


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1024 bits (3882),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKAASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSK ASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

24) inlA in NC_018586


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1024 bits (3882),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKAASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSK ASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

25) M637_04850 in NC_021824


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1024 bits (3882),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKAASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSK ASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

26) M643_12500 in NC_021826


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1024 bits (3882),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKAASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSK ASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

27) M641_11645 in NC_021838


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1024 bits (3882),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKAASLPTTGDSDNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSK ASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

28) MUO_02455 in NC_017728


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1022 bits (3874),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 780/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPVNQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTP+NQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSYNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDS NALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

29) inlA in NC_012488


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1022 bits (3874),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 780/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPVNQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTP+NQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSYNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDS NALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

30) inlA in NC_018642


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1022 bits (3874),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 780/800 (98%), Positives = 795/800 (99%), Gaps = 0/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPVNQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTP+NQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLT+LQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TFVGWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsntsntstgnsasttstmnaYDPYNSKEASLPTTGDSYNALYLL  780
            TNNGGNTTPPSANIPGS+TSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDS NALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  IGLLAVGTAVALTKKARASK  800
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

31) M639_00345 in NC_021837


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1019 bits (3862),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 787/800 (99%), Positives = 798/800 (99%), Gaps = 0/800 (0%)

Query  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTV  60
            MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTD+ALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITD+DPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYKANVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAKT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TF+GWFDA+T
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWNFSTDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGTKWNFSTDKMPTNDI+LYAQFSINSYTAT+DNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIPgsdtsntstgnsasttstMNAYDPYNSKEASLPTTGDSDNalyll  780
            TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  781  lgllavgtamaltKKARASK  800
            LGLLAVGTAMALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

32) LM1816_01762 in NC_021829


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1018 bits (3859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 775/800 (97%), Positives = 791/800 (99%), Gaps = 3/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TF+GWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTNWNFSTDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGT+WNFSTDKMPTNDI+LYAQFSINSYTAT+DNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYAFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGY+FKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIP---gsntstgnsasttstMNAYDPYNSKEASLPTTGDSYNALYLL  777
            TNNGGNTTPPSANIP    SNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDS NALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  778  IGLLAVGTAVALTKKARASK  797
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

33) M640_01170 in NC_021839


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1018 bits (3859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 775/800 (97%), Positives = 791/800 (99%), Gaps = 3/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TF+GWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTNWNFSTDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGT+WNFSTDKMPTNDI+LYAQFSINSYTAT+DNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYAFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGY+FKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIP---gsntstgnsasttstMNAYDPYNSKEASLPTTGDSYNALYLL  777
            TNNGGNTTPPSANIP    SNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDS NALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  778  IGLLAVGTAVALTKKARASK  797
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

34) M644_13770 in NC_021827


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1018 bits (3859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 775/800 (97%), Positives = 791/800 (99%), Gaps = 3/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TF+GWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTNWNFSTDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGT+WNFSTDKMPTNDI+LYAQFSINSYTAT+DNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYAFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGY+FKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIP---gsntstgnsasttstMNAYDPYNSKEASLPTTGDSYNALYLL  777
            TNNGGNTTPPSANIP    SNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDS NALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  778  IGLLAVGTAVALTKKARASK  797
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

35) M645_01700 in NC_021840


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score = 1018 bits (3859),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 775/800 (97%), Positives = 791/800 (99%), Gaps = 3/800 (0%)

Query  1    MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60
            MR+KRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLT  120
            LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG+EYLNNLTQINFSNNQLTDITPLK+LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLVDILMNNNQIADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNTISDIS  180
            KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240
            ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  ISDITPLGILTNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTEL  300
            ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  KLGANQISNISPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSL  360
            KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNP  420
            TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ WTN+
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVNYKVNVSIPNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIG  480
            PVNYK NVSIPNTVKNVTGALIAPATISDGGSY+EPDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  KGTTTFSGTVTQPLKAIFNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQT  540
            KGTTTFSGTVTQPLKAIFN KFHVDGKETTKEVEAGNLLTEPAKPVKEG TF+GWFDAQT
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTNWNFSTDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600
            GGT+WNFSTDKMPTNDI+LYAQFSINSYTAT+DNDGVTTSQTVDYQGLLQEPTAPTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLK  660
            TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGK+TTQAVDYQGLLK
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKTPTKAGYAFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAppttggntppt  720
            EPK+PTKAGY+FKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  tnnggnttppSANIP---gsntstgnsasttstMNAYDPYNSKEASLPTTGDSYNALYLL  777
            TNNGGNTTPPSANIP    SNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDS NALYLL
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  778  IGLLAVGTAVALTKKARASK  797
            +GLLAVGTA+ALTKKARASK
Sbjct  781  LGLLAVGTAMALTKKARASK  800

36) LIV_0353 in NC_016011


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  789 bits (2988),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 535/798 (68%), Positives = 680/798 (86%), Gaps = 1/798 (0%)

Query  1    MRKEQYVWLRSillailvgvgglyvaTSNGTNVEAATISNPTPINTLFTDPALAEVVKTD  60
            MRK +YVWL+SIL+AILV  +G+ + TSNGTN +AATI++ TPIN +FTD ALAE +KT 
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  61   LGKATVSDTVTQTDLDGITSLEADRKGITSIAGVEYLNNVTQLDFSYNQITDLTPLANLT  120
            LGK+ V+DTV+QTDLD +T+L+ADR GI SI GVEYLNN+TQ++FS NQ+TD+TPL NLT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  121  KLTSLVMNNNQIADLTPLQNLTSLTELTLFYNKITDVaplanltnltnlaitDNEISDVT  180
            KL  ++MNNNQIAD+TPL NLT+LT LTLF N+ITD+ PL NLTNL  L ++ N ISD++
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  181  PIGNLTNLEGLSIGNKVTDIKPLANLTKLERLNLSRNKITDISPVAKLINLQSLSLDNNQ  240
            +++ LT+L+ LS+GN+VTD+KPLANLT LERL++S NK++DIS +AKL NL+SL   NNQ
Sbjct  181  ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQ  240

Query  241  FSDLTPLGILTNLTELSLYSNHLSDIGTLASLTNLKKLNLMDNQISNLAPIsnltnltdl  300
            +SD+TPLGILTNL ELSL +N+L DIGTLASLTNL  L+L +NQISNLAP+S LT+LT+L
Sbjct  241  ISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL  300

Query  301  nlstnQISDLKPISNLTNLTVLQVPTNQLEDISPISSLPNLEFLTLYTNQISDLSPLENL  360
            +L++NQIS++ P++ LT LT L++  NQLEDISPIS+L NL +LTLY N+ISD+SP+ +L
Sbjct  301  KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL  360

Query  361  TKLKQLFFYDNKVSDVSPIANLTSLQELSAGTNQISDLTPLAKLTRLTQLGLDKQKVTSQ  420
            TKL++LFFY+NKVSDVS++ANLT+++ LSAG NQISDLTPLA+LTR+TQLGL+ Q  T+ 
Sbjct  361  TKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA  420

Query  421  PVKYQSNLVVPNAVKNVTGALINPATISDNGTYTNPDITWNLPSYTNEVSYTFNQSVTIG  480
            PV+Y++N+ +PN+VKNVTGALI PATISD G+YT+PDITWNLPSYTNEVSYTF+Q+VTIG
Sbjct  421  PVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG  480

Query  481  RGTATFSGTVTQPLKAIFNVKYHVNGNETATEVESGNLLTEPKVPTKTGYTFTGWFDAET  540
            +GT+TFSGTVTQPLKAIFNVK+HV+G+ET+ EVE+GNLLTEP  P K G TF GWFDA+T
Sbjct  481  KGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQT  540

Query  541  GGTKWDFMTNKMPTNDLDLYAQFTINDYTATLNEDGKTSTQTVKYQELLQEPPTPTKEGY  600
            GGTKW+F T+KMPTND++LYAQF+IN YTAT+++DG T++QTV YQ LLQEP +PTKEGY
Sbjct  541  GGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGY  600

Query  601  TFKGWYDAKTGGNKWDFTTSKMPAKDITLYAQFSANSYTVTLDVDGKQTKQKADYQSLVK  660
            TFKGWYDAKTGG+KWDF+TSKMPAK+ITLYAQ+SANSYT T+DVDGK T Q  DYQ+L+K
Sbjct  601  TFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLK  660

Query  661  EPKVPTKAGYTFTGWYDAEKGGNKWDFASDKMPANDITLYAQFTKDPVtppnqpnnggsg  720
            EPK PTKAGYTF GWYD   +G+KWDFA+DKMPANDITLYAQFTK+PV+PP    N  + 
Sbjct  661  EPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPT  720

Query  721  stpsgtipgnNTSNTQMGNSQSATGDNMSGYDPYNAYN-YQGQGTGLPTTGDSDNAIYIL  779
            +  +G     +++    + S+++TG++ S     NAY+ Y+++ ++LPTTGDSDNA+Y+L
Sbjct  721  TNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLL  780

Query  780  LGLLLVGTAFAITKKVRT  797
            LGLL VGTA A+TKK R+
Sbjct  781  LGLLAVGTAMALTKKARA  798

37) LM5923_0442 in NC_013768


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  520 bits (1960),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 309/695 (45%), Positives = 489/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnlts-------  346
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L         
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  347  ---------------lqltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                           L   +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSTDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + +  G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFNVEGNASEVETITEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E +   NL+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  251 bits (938),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 116/209 (56%), Positives = 160/209 (77%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFIKE  738
               +G KWDF T KMPANDITLYA+F K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

38) LM5578_0443 in NC_013766


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  520 bits (1960),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 309/695 (45%), Positives = 489/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnlts-------  346
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L         
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  347  ---------------lqltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                           L   +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSTDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + +  G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFNVEGNASEVETITEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E +   NL+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  251 bits (938),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 116/209 (56%), Positives = 160/209 (77%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFIKE  738
               +G KWDF T KMPANDITLYA+F K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

39) lin0372 in NC_003212


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  512 bits (1931),  Expect = 2e-146, Method: Compositional matrix adjust.
 Identities = 292/577 (51%), Positives = 424/577 (74%), Gaps = 23/577 (3%)

Query  39   INQIFPDDALAKEIQTALGKSSTAEVVTQTDLDTINSLTLTSKGISSIEGMNYLTNLGTL  98
            I +I P   L++    +L ++  +++    +L  +N L L+S+ IS I +++ LT+L  L
Sbjct  132  IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL  191

Query  99   ILSSNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGL  158
             ++ NQV+D+ PL  LT L  L++S+N +SDIS L++L NL++L   + QI+DITPL+ L
Sbjct  192  SFG-NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250

Query  159  TNLKGLGLYNNQLENLSGVNNLQQLRSLNVSNNKLTNLDELQALSNLGVLYANGNQINNL  218
            TNL  L+L  NQL +++ + +L +L  L+++NN+++NL  L +L++L  L   +NQI+N+
Sbjct  251  TNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNI  310

Query  219  QGLSTLKNLFLLDLSTNQ----------------------IVDTTPLAGLTNVQTLYLSN  256
              L+ L  L  L+L+ NQ                      I D +P+++LT++Q L++ N
Sbjct  311  SPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370

Query  257  NQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIVNEPISFESTITI  316
            N++SDV++L++L N++WL  ++N+IS++ PL +LT++T + + +Q   N P+++ + ++I
Sbjct  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430

Query  317  PNLIKNIAEQTIDPDTISDSGVYANGSVTWNLPTYIPKVSYTFIERDTVGNATGNFSGTV  376
            PN +KN++   I P TISD+G Y++  +TWNLP+Y   VSYTF +  T+G++T  FSGTV
Sbjct  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490

Query  377  EQPLVQYFKATFNIEGQETTENVETGTLLQEPPTPVKEGYTFNGWYDAETGGTKWDFTAD  436
             QPL   F+  F+++G+ETT +VE+G LL EP+ PVKEG TF GW+DA+TGGTKW+F++D
Sbjct  491  TQPLKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTD  550

Query  437  TMPANDITLYAQFSINSYTATFDVDGVTSTQTVDYQGLLEEPPAPTKDGYTFKGWYDAKT  496
             MP+NDI LYAQFSINSYTATFD DGVT++QTVDYQGLL+EP APTK+GYTFKGWYDAKT
Sbjct  551  KMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKT  610

Query  497  GGTKWDFTNNQMPAKDITLYAQFSINSYTATFDVDGVISTQTVDYQGLLEEPPAPTKDGY  556
            GG KWDF+ ++MPAK+ITLYAQ+S NSYTATFDVDG  +TQ+VDYQGLL EP APTK GY
Sbjct  611  GGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGY  670

Query  557  TFKGWYDAKSGGTKWDFANNQMPAKDIILYAQFSKDA  593
            TFKGWYD K++G KWDFA ++MPA+DI LYAQF+K++
Sbjct  671  TFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNP  707


 Score =  168 bits (621),  Expect = 9e-43, Method: Compositional matrix adjust.
 Identities = 125/310 (41%), Positives = 207/310 (67%), Gaps = 6/310 (1%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDayaaaappaa-----INQIFPDDALAKEIQTA  55
            M+ K  + L  +L   +V+G+ V I+    + A +++      INQIF D ALA  ++T 
Sbjct  1    MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTV  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSIEGMNYLTNLGTLILSSNQVSDISPLKGLT  115
            LGK++ ++ V+QTDLD + +L     GI SI+G++YL NL  + +S+NQ++DI+PLK LT
Sbjct  61   LGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYNNQLENLS  175
            +L  + ++ N I+DI++L+NL NL +L + + QITDI PL  LTNL+ L L +N + ++S
Sbjct  121  KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDIS  180

Query  176  GVNNLQQLRSLNVSNNKLTNLDELQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTN  235
            +++ L  L+ L+ +N+ +T+L  L  L+ L  L  ++N+++++  L+ L NL  L  + N
Sbjct  181  ALSGLTSLQQLSFGNQ-VTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNN  239

Query  236  QIVDTTPLAGLTNVQTLYLSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTI  295
            QI D TPL+ LTN++ L L+ NQ+ D+  L+SL NL  LD+++N+ISN+ PL++LTKLT 
Sbjct  240  QISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTE  299

Query  296  IQMTNQLIVN  305
            +++  + I N
Sbjct  300  LKLGANQISN  309


 Score = 65.8 bits (230),  Expect = 7e-12, Method: Compositional matrix adjust.
 Identities = 52/165 (32%), Positives = 100/165 (61%), Gaps = 0/165 (0%)

Query  145  NDAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVSNNKLTNLDELQALSN  204
            +D+ I +I   ++L++     L + ++ +  +  +L+Q+ +L+     + ++D ++ L+N
Sbjct  40   QDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNN  99

Query  205  LGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIVDTTPLAGLTNVQTLYLSNNQISDVTG  264
            L  +  + NQ+ ++  L  L +L  + ++ NQI D TPLA LTN+  L L NNQI+D+  
Sbjct  100  LTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDP  159

Query  265  LSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIVNEPIS  309
            L +L NL++L++S N IS+I +L++LT L  +   NQ+    P++
Sbjct  160  LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLA  204

40) M639_00460 in NC_021837


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  510 bits (1924),  Expect = 1e-145, Method: Compositional matrix adjust.
 Identities = 308/695 (45%), Positives = 491/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLTKIQSSDFSNQMITNPERNFSKTLSVPN  391
                               +N+I+D++PLANLT+I   ++++Q  TN+  N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  251 bits (937),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 116/209 (56%), Positives = 160/209 (77%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFIKE  738
               +G KWDF T KMPANDITLYA+F K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

41) LMRG_00102 in NC_017544


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  507 bits (1913),  Expect = 8e-145, Method: Compositional matrix adjust.
 Identities = 308/695 (45%), Positives = 491/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  248 bits (927),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 115/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+T+ GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

42) inlF in NC_018592


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  507 bits (1913),  Expect = 8e-145, Method: Compositional matrix adjust.
 Identities = 308/695 (45%), Positives = 491/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  248 bits (927),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 115/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+T+ GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

43) lmo0409 in NC_003210


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  507 bits (1913),  Expect = 9e-145, Method: Compositional matrix adjust.
 Identities = 308/695 (45%), Positives = 490/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAAPQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  251 bits (939),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 116/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

44) LMKG_01500 in NC_017546


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  507 bits (1913),  Expect = 9e-145, Method: Compositional matrix adjust.
 Identities = 308/695 (45%), Positives = 490/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAAPQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  251 bits (939),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 116/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

45) inlF in NC_018588


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  507 bits (1913),  Expect = 9e-145, Method: Compositional matrix adjust.
 Identities = 308/695 (45%), Positives = 490/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAAPQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  251 bits (939),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 116/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

46) inlF in NC_018589


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  507 bits (1913),  Expect = 9e-145, Method: Compositional matrix adjust.
 Identities = 308/695 (45%), Positives = 490/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAAPQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  251 bits (939),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 116/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

47) M642_14710 in NC_021823


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  506 bits (1908),  Expect = 2e-144, Method: Compositional matrix adjust.
 Identities = 306/695 (45%), Positives = 489/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLSKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANL++I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDEE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYD  
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  250 bits (934),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 115/209 (56%), Positives = 159/209 (77%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDEETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+D +TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFIKE  738
               +G KWDF T KMPANDITLYA+F K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

48) inlF in NC_018593


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  505 bits (1906),  Expect = 3e-144, Method: Compositional matrix adjust.
 Identities = 308/695 (45%), Positives = 489/695 (71%), Gaps = 48/695 (6%)

Query  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANLT+I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSTDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + +  G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F+V+G+ +  E  + + L+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKFHVDGKETTKEVEAGN-LLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYDA 
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQG  631
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK G
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  632  YTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666
            YTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704


 Score =  250 bits (935),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 116/209 (56%), Positives = 160/209 (77%), Gaps = 0/209 (0%)

Query  530  YQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557

Query  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617

Query  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEDVVNYDALIPEPTSPSKTGFTFEGWYD  709
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+TF GWYD
Sbjct  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677

Query  710  AEVGGTKWDFKTMKMPANDITLYAHFIKE  738
               +G KWDF T KMPANDITLYA+F K+
Sbjct  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706

49) inlF in NC_018584


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1809),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 297/671 (45%), Positives = 470/671 (71%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EP++P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y++LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

50) LM220_05422 in NC_021830


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1809),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 297/671 (45%), Positives = 470/671 (71%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EP++P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y++LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

51) LM1816_01587 in NC_021829


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1809),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 297/671 (45%), Positives = 470/671 (71%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EP++P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y++LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

52) M640_01000 in NC_021839


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1809),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 297/671 (45%), Positives = 470/671 (71%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EP++P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y++LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

53) M644_13940 in NC_021827


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1809),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 297/671 (45%), Positives = 470/671 (71%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EP++P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y++LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

54) M645_01530 in NC_021840


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1809),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 297/671 (45%), Positives = 470/671 (71%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EP++P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y++LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

55) inlF in NC_018587


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1808),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 298/671 (45%), Positives = 469/671 (70%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

56) inlF in NC_018591


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1808),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 298/671 (45%), Positives = 469/671 (70%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

57) M643_12400 in NC_021826


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1808),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 298/671 (45%), Positives = 469/671 (70%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

58) M641_11745 in NC_021838


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  480 bits (1808),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 298/671 (45%), Positives = 469/671 (70%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

59) MUO_02260 in NC_017728


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 297/668 (45%), Positives = 467/668 (70%), Gaps = 47/668 (7%)

Query  43   APINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnle  102
            +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL NL 
Sbjct  42   TPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLT  101

Query  103  ylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLA  162
             +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI PL 
Sbjct  102  QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK  161

Query  163  NLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESKVKD  202
            NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +KV D
Sbjct  162  NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD  221

Query  203  VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIG  262
            ++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L ++
Sbjct  222  ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLA  281

Query  263  NNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnlsql  322
            NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL +L
Sbjct  282  NNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL  341

Query  323  nslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHITDIR  360
              L L  N+++  D+  +++LT+L  LF+                      ++N+I+D+ 
Sbjct  342  TYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT  399

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P++ 
Sbjct  400  PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT  459

Query  421  WSSPSYLPEVRYTFKQDVVVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            W+ PSY  EV YTF Q V +G  T++++G + QPL+    +NV F++DG+ +  K V   
Sbjct  460  WNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEVEAG  516

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD DG
Sbjct  517  NLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDG  576

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
               +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA+++ +
Sbjct  577  VTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSAN  636

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMPAND
Sbjct  637  SYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPAND  696

Query  661  VTLYAHFT  668
            +TLYA+FT
Sbjct  697  ITLYAQFT  704

60) inlF in NC_012488


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 297/668 (45%), Positives = 467/668 (70%), Gaps = 47/668 (7%)

Query  43   APINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnle  102
            +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL NL 
Sbjct  42   TPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLT  101

Query  103  ylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLA  162
             +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI PL 
Sbjct  102  QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK  161

Query  163  NLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESKVKD  202
            NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +KV D
Sbjct  162  NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD  221

Query  203  VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIG  262
            ++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L ++
Sbjct  222  ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLA  281

Query  263  NNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnlsql  322
            NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL +L
Sbjct  282  NNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL  341

Query  323  nslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHITDIR  360
              L L  N+++  D+  +++LT+L  LF+                      ++N+I+D+ 
Sbjct  342  TYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT  399

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P++ 
Sbjct  400  PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT  459

Query  421  WSSPSYLPEVRYTFKQDVVVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            W+ PSY  EV YTF Q V +G  T++++G + QPL+    +NV F++DG+ +  K V   
Sbjct  460  WNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEVEAG  516

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD DG
Sbjct  517  NLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDG  576

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
               +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA+++ +
Sbjct  577  VTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSAN  636

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMPAND
Sbjct  637  SYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPAND  696

Query  661  VTLYAHFT  668
            +TLYA+FT
Sbjct  697  ITLYAQFT  704

61) inlF in NC_018642


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  479 bits (1806),  Expect = 2e-136, Method: Compositional matrix adjust.
 Identities = 297/668 (45%), Positives = 467/668 (70%), Gaps = 47/668 (7%)

Query  43   APINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnle  102
            +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL NL 
Sbjct  42   TPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLT  101

Query  103  ylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLA  162
             +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI PL 
Sbjct  102  QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK  161

Query  163  NLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESKVKD  202
            NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +KV D
Sbjct  162  NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD  221

Query  203  VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIG  262
            ++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L ++
Sbjct  222  ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLA  281

Query  263  NNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnlsql  322
            NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL +L
Sbjct  282  NNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL  341

Query  323  nslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHITDIR  360
              L L  N+++  D+  +++LT+L  LF+                      ++N+I+D+ 
Sbjct  342  TYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT  399

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P++ 
Sbjct  400  PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT  459

Query  421  WSSPSYLPEVRYTFKQDVVVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            W+ PSY  EV YTF Q V +G  T++++G + QPL+    +NV F++DG+ +  K V   
Sbjct  460  WNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEVEAG  516

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD DG
Sbjct  517  NLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDG  576

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
               +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA+++ +
Sbjct  577  VTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSAN  636

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMPAND
Sbjct  637  SYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPAND  696

Query  661  VTLYAHFT  668
            +TLYA+FT
Sbjct  697  ITLYAQFT  704

62) inlF in NC_018586


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  478 bits (1803),  Expect = 4e-136, Method: Compositional matrix adjust.
 Identities = 298/671 (45%), Positives = 469/671 (70%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  AKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
              D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPLDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TISSYQANFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY A FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

63) M637_04750 in NC_021824


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  478 bits (1802),  Expect = 5e-136, Method: Compositional matrix adjust.
 Identities = 298/671 (45%), Positives = 469/671 (70%), Gaps = 47/671 (7%)

Query  40   TPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeylt  99
            T  +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL 
Sbjct  39   TQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLN  98

Query  100  nleylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDIS  159
            NL  +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI 
Sbjct  99   NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID  158

Query  160  PLANLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESK  199
            PL NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +K
Sbjct  159  PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK  218

Query  200  VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL  259
            V D++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L
Sbjct  219  VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL  278

Query  260  KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnl  319
             ++NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL
Sbjct  279  DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNL  338

Query  320  sqlnslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHIT  357
             +L  L L  N+++  D+  +++LT+L  LF+                      ++N+I+
Sbjct  339  KNLTYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS  396

Query  358  DIRPLASLSKMDSADFANQVIKKPARNFLKTLSVPNNITSIDGTLVTPKTISNNGTYDAP  417
            D+ PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P
Sbjct  397  DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP  456

Query  418  NVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPLDYNVTFNIDGNTSEVKTV  477
            ++ W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V
Sbjct  457  DITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEV  513

Query  478  TEEDLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFD  537
               +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD
Sbjct  514  EAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFD  573

Query  538  IDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHF  597
             DG   +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA++
Sbjct  574  NDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQY  633

Query  598  TVSSYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMP  657
            + +SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T KMP
Sbjct  634  SANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMP  693

Query  658  ANDVTLYAHFT  668
            AND+TLYA+FT
Sbjct  694  ANDITLYAQFT  704

64) inlF in NC_002973


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  478 bits (1801),  Expect = 6e-136, Method: Compositional matrix adjust.
 Identities = 296/668 (45%), Positives = 468/668 (71%), Gaps = 47/668 (7%)

Query  43   APINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnle  102
            +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL NL 
Sbjct  42   TPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLT  101

Query  103  ylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLA  162
             +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI PL 
Sbjct  102  QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK  161

Query  163  NLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESKVKD  202
            NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +KV D
Sbjct  162  NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD  221

Query  203  VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIG  262
            ++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L ++
Sbjct  222  ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLA  281

Query  263  NNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnlsql  322
            NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL +L
Sbjct  282  NNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL  341

Query  323  nslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHITDIR  360
              L L  N+++  D+  +++LT+L  LF+                      ++N+I+D+ 
Sbjct  342  TYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT  399

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P++ 
Sbjct  400  PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT  459

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V   
Sbjct  460  WNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEVEAG  516

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD DG
Sbjct  517  NLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDG  576

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
               +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA+++ +
Sbjct  577  VTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSAN  636

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKIPAND  660
            SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T K+PAND
Sbjct  637  SYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPAND  696

Query  661  VTLYAHFT  668
            +TLYA+FT
Sbjct  697  ITLYAQFT  704

65) inlA_5 in NC_019556


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  478 bits (1801),  Expect = 6e-136, Method: Compositional matrix adjust.
 Identities = 296/668 (45%), Positives = 468/668 (71%), Gaps = 47/668 (7%)

Query  43   APINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnle  102
            +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL NL 
Sbjct  42   TPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLT  101

Query  103  ylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLA  162
             +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI PL 
Sbjct  102  QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK  161

Query  163  NLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESKVKD  202
            NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +KV D
Sbjct  162  NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD  221

Query  203  VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIG  262
            ++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L ++
Sbjct  222  ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLA  281

Query  263  NNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnlsql  322
            NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL +L
Sbjct  282  NNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL  341

Query  323  nslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHITDIR  360
              L L  N+++  D+  +++LT+L  LF+                      ++N+I+D+ 
Sbjct  342  TYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT  399

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P++ 
Sbjct  400  PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT  459

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V   
Sbjct  460  WNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEVEAG  516

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD DG
Sbjct  517  NLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDG  576

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
               +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA+++ +
Sbjct  577  VTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSAN  636

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKIPAND  660
            SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T K+PAND
Sbjct  637  SYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPAND  696

Query  661  VTLYAHFT  668
            +TLYA+FT
Sbjct  697  ITLYAQFT  704

66) inlF in NC_018585


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  478 bits (1801),  Expect = 6e-136, Method: Compositional matrix adjust.
 Identities = 296/668 (45%), Positives = 468/668 (71%), Gaps = 47/668 (7%)

Query  43   APINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnle  102
            +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL NL 
Sbjct  42   TPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLT  101

Query  103  ylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLA  162
             +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI PL 
Sbjct  102  QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK  161

Query  163  NLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESKVKD  202
            NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +KV D
Sbjct  162  NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD  221

Query  203  VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIG  262
            ++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L ++
Sbjct  222  ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLA  281

Query  263  NNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnlsql  322
            NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL +L
Sbjct  282  NNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL  341

Query  323  nslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHITDIR  360
              L L  N+++  D+  +++LT+L  LF+                      ++N+I+D+ 
Sbjct  342  TYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT  399

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P++ 
Sbjct  400  PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT  459

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V   
Sbjct  460  WNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEVEAG  516

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD DG
Sbjct  517  NLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDG  576

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
               +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA+++ +
Sbjct  577  VTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSAN  636

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKIPAND  660
            SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T K+PAND
Sbjct  637  SYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPAND  696

Query  661  VTLYAHFT  668
            +TLYA+FT
Sbjct  697  ITLYAQFT  704

67) M638_13315 in NC_021825


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  478 bits (1801),  Expect = 6e-136, Method: Compositional matrix adjust.
 Identities = 296/668 (45%), Positives = 468/668 (71%), Gaps = 47/668 (7%)

Query  43   APINQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnle  102
            +PINQIF D+ LAE +++VL K++VTD V+Q +L+ +T L      + SI+G+EYL NL 
Sbjct  42   TPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLT  101

Query  103  ylnlngnQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLA  162
             +N++ NQ+TDI+PL NL KL ++ +  N+I+DI++L NLTNL  L L +++I+DI PL 
Sbjct  102  QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK  161

Query  163  NLTKMYSLNLGAN--------------------HNLSDLSPLSNMTGLNYLTVTESKVKD  202
            NLT++  L+L++N                    ++++DL PL+N+T L+ L ++ +KV D
Sbjct  162  NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD  221

Query  203  VTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIG  262
            ++ +A+LT+L SL    NQI DI+PL+ LT+L+ ++   NQ+ DI  +A++T L  L ++
Sbjct  222  ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLA  281

Query  263  NNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVlnnlsql  322
            NN+I++L+PL+ L++LT L +G+NQIS+I+++ +LT L  L++  NQ+ DIS ++NL +L
Sbjct  282  NNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL  341

Query  323  nslflnnnqlGNEDMEVIGGLTNLTTLFL----------------------SQNHITDIR  360
              L L  N+++  D+  +++LT+L  LF+                      ++N+I+D+ 
Sbjct  342  TYLTLYFNNIS--DISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT  399

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+++   ++ +Q   +++ N+   +S+PN + ++ G+L++P TIS+ G+Y  P++ 
Sbjct  400  PLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT  459

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            W+ PSY  EV YTF Q V++G  T++++G + QPL+    +NV F++DG+ +  K V   
Sbjct  460  WNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAI--FNVKFHVDGKET-TKEVEAG  516

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +L+ EPA+P K+G TF GW+DA+TGGTKW+F+T++MP+ND+ LYA+FS+NSY   FD DG
Sbjct  517  NLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDG  576

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
               +++V Y+ LL+EPTAPTK+GYTF GWYDA TGG+KWDF T KMPA+++TLYA+++ +
Sbjct  577  VTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSAN  636

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKIPAND  660
            SY   FD+DG  T +A+ Y+ LL+EP +PTK GYTF GWYD  T+G+KWDF T K+PAND
Sbjct  637  SYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPAND  696

Query  661  VTLYAHFT  668
            +TLYA+FT
Sbjct  697  ITLYAQFT  704

68) LMLG_2940 in NC_017547


> AJ012346|2|G2|12054782|CAC20628.1|Listeria_monocytogenes_EGD|+|1533..3935|inlA|-|internalin 
A
Length=800

 Score =  442 bits (1665),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 278/693 (41%), Positives = 464/693 (67%), Gaps = 52/693 (7%)

Query  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72

Query  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132

Query  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNS-----------------  176
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+                 
Sbjct  133  ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS  192

Query  177  ---NISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTK  233
               +++DL+P+ N+T L+ L+++++ + D++ LA +T+L  L  ++NQI D++PL+ LT+
Sbjct  193  FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN  252

Query  234  LDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISM  293
            LD+++  +N++ DI  +++LT L  LDL++N+I++L+P++ L KLT L L+ NQI+NIS 
Sbjct  253  LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP  312

Query  294  LEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltsl------  347
            L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L      
Sbjct  313  LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK  372

Query  348  ----------------qltqnHITDISPLANLSKIQYSDFSNQMITNLERNFSKTLSVPN  391
                               +N+I+D++PLANL++I   ++++Q  TN   N+   +S+PN
Sbjct  373  VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPN  432

Query  392  NITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQ  451
             + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +TQ
Sbjct  433  TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQ  492

Query  452  PLKELLDYKVTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTT  511
            PLK +  ++V F   +       V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F+T
Sbjct  493  PLKAI--FNVKF-HVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFST  549

Query  512  GQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDEE  571
            ++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y+ LL+EPT+PTK+GYTF GWYD  
Sbjct  550  DKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAK  609

Query  572  TGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIPYS--MNRPLQPNKVI  629
            TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y   ++ P  P K  
Sbjct  610  TGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAG  669

Query  630  HLMVG--MTQKQAERSGISKRRKCPRMMSLYMH  660
                G    + ++ + +++  +  +  ++LY +
Sbjct  670  YTFKGWYDEKTDGKKWDFATDKMPANDITLYAQ  702