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Homologs of inlG gene of AJ007319

104

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) LMRG_02647
( YP_005961400.1 )

internalin G

NC_017544
(Listeria monocytogenes 10403S)

0.0

100

2) inlG
( NP_463793.1 )

internalin G

NC_003210
(Listeria monocytogenes EGD-e)

0.0

100

3) LMKG_01662
( YP_005967182.1 )

internalin G

NC_017546
(Listeria monocytogenes FSL R2-561)

0.0

100

4) inlG
( YP_006683590.1 )

internalin G

NC_018588
(Listeria monocytogenes SLCC2372)

0.0

100

5) inlG
( YP_006686525.1 )

internalin G

NC_018589
(Listeria monocytogenes SLCC2479)

0.0

100

6) inlG
( YP_006695080.1 )

internalin G

NC_018592
(Listeria monocytogenes SLCC5850)

0.0

100

7) M642_13990
( YP_008273577.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

0.0

8) LMLG_0792
( YP_005970100.1 )

internalin G

NC_017547
(Listeria monocytogenes Finland 1988)

0.0

9) inlG
( YP_003412424.1 )

internalin G

NC_013766
(Listeria monocytogenes 08-5578)

0.0

10) inlG
( YP_003415513.1 )

internalin G

NC_013768
(Listeria monocytogenes 08-5923)

0.0

11) inlG
( YP_006697946.1 )

internalin G

NC_018593
(Listeria monocytogenes SLCC7179)

0.0

12) M639_01180
( YP_008294883.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

0.0

13) inlG
( YP_006689430.1 )

internalin G

NC_018590
(Listeria monocytogenes SLCC2376)

0.0

14) M640_00195
( YP_008300594.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

0.0

15) LM1816_16590
( YP_008286441.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

0.0

16) M644_14745
( YP_008285529.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

0.0

17) M645_00725
( YP_008303586.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

0.0

18) inlH
( NP_463794.1 )

internalin H

NC_003210
(Listeria monocytogenes EGD-e)

3e-101

19) LMKG_01661
( YP_005967183.1 )

internalin H protein

NC_017546
(Listeria monocytogenes FSL R2-561)

3e-101

20) inlH
( YP_006683591.1 )

internalin H

NC_018588
(Listeria monocytogenes SLCC2372)

3e-101

21) inlH
( YP_006686526.1 )

internalin H

NC_018589
(Listeria monocytogenes SLCC2479)

3e-101

22) inlC2
( YP_006689431.1 )

internalin C2

NC_018590
(Listeria monocytogenes SLCC2376)

1e-100

23) MUO_01495
( YP_006204530.1 )

internalin H (LPXTG motif)

NC_017728
(Listeria monocytogenes 07PF0776)

1e-100

24) inlH
( YP_002757004.1 )

internalin H (LPXTG motif)

NC_012488
(Listeria monocytogenes Clip81459)

1e-100

25) inlC2
( YP_012891.1 )

internalin C2

NC_002973
(Listeria monocytogenes F2365)

1e-100

26) M638_14050
( YP_008279419.1 )

internalin

NC_021825
(Listeria monocytogenes J2-1091)

1e-100

27) inlC2
( YP_006753396.1 )

internalin C2 (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

1e-100

28) inlA
( YP_007013848.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

1e-100

29) M643_11650
( YP_008281835.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

1e-100

30) M641_12485
( YP_008299996.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

1e-100

31) inlC2
( YP_006674951.1 )

internalin C2

NC_018585
(Listeria monocytogenes SLCC2378)

1e-100

32) inlC2
( YP_006692221.1 )

internalin C2

NC_018591
(Listeria monocytogenes SLCC2482)

1e-100

33) inlC2
( YP_006680716.1 )

internalin C2

NC_018587
(Listeria monocytogenes SLCC2755)

1e-100

34) inlC2
( YP_006672078.1 )

internalin C2

NC_018584
(Listeria monocytogenes ATCC 19117)

2e-100

35) LM220_01592
( YP_008288462.1 )

internalin

NC_021830
(Listeria monocytogenes J1-220)

2e-100

36) M637_03935
( YP_008274592.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

2e-100

37) LMOG_02567
( YP_005964238.1 )

internalin C2

NC_017545
(Listeria monocytogenes J0161)

3e-100

38) M640_00200
( YP_008300595.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

3e-100

39) LM1816_09035
( YP_008286440.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

3e-100

40) M644_14740
( YP_008285528.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

3e-100

41) M645_00730
( YP_008303587.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

3e-100

42) LMRG_02646
( YP_005961401.1 )

internalin C2

NC_017544
(Listeria monocytogenes 10403S)

3e-100

43) M639_01175
( YP_008294882.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

3e-100

44) inlC2
( YP_006695081.1 )

internalin C2

NC_018592
(Listeria monocytogenes SLCC5850)

3e-100

45) inlC2
( YP_006697947.1 )

internalin C2

NC_018593
(Listeria monocytogenes SLCC7179)

3e-100

46) inlC2
( YP_006677817.1 )

internalin C2

NC_018586
(Listeria monocytogenes SLCC2540)

3e-100

47) inlC2
( YP_003412425.1 )

internalin H

NC_013766
(Listeria monocytogenes 08-5578)

4e-100

48) inlC2
( YP_003415514.1 )

internalin H

NC_013768
(Listeria monocytogenes 08-5923)

4e-100

49) M642_13995
( YP_008273578.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

3e-99

50) LMLG_0791
( YP_005970101.1 )

internalin C2

NC_017547
(Listeria monocytogenes Finland 1988)

3e-99

51) inlD
( YP_006689432.1 )

internalin D

NC_018590
(Listeria monocytogenes SLCC2376)

4e-97

52) M640_00205
( YP_008300596.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

5e-97

53) LM1816_16585
( YP_008286439.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

5e-97

54) M644_14735
( YP_008285527.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

5e-97

55) M645_00735
( YP_008303588.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

5e-97

56) inlD
( YP_006697948.1 )

internalin D

NC_018593
(Listeria monocytogenes SLCC7179)

6e-97

57) inlD
( YP_012892.1 )

internalin D

NC_002973
(Listeria monocytogenes F2365)

1e-96

58) LM220_17725
( YP_008288463.1 )

internalin

NC_021830
(Listeria monocytogenes J1-220)

1e-96

59) M637_03940
( YP_008274593.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

1e-96

60) M638_14045
( YP_008279418.1 )

internalin

NC_021825
(Listeria monocytogenes J2-1091)

1e-96

61) inlA_2
( YP_007013849.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

1e-96

62) M643_11655
( YP_008281836.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

1e-96

63) M641_12480
( YP_008299995.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

1e-96

64) inlD
( YP_006674952.1 )

internalin D

NC_018585
(Listeria monocytogenes SLCC2378)

1e-96

65) inlD
( YP_006692222.1 )

internalin D

NC_018591
(Listeria monocytogenes SLCC2482)

1e-96

66) inlD
( YP_006680717.1 )

internalin D

NC_018587
(Listeria monocytogenes SLCC2755)

1e-96

67) inlD
( YP_003412426.1 )

internalin H

NC_013766
(Listeria monocytogenes 08-5578)

7e-97

68) inlD
( YP_003415515.1 )

internalin H

NC_013768
(Listeria monocytogenes 08-5923)

7e-97

69) LMRG_02851
( YP_005961402.1 )

internalin D

NC_017544
(Listeria monocytogenes 10403S)

8e-97

70) LMOG_02566
( YP_005964239.1 )

internalin D

NC_017545
(Listeria monocytogenes J0161)

8e-97

71) inlD
( YP_006695082.1 )

internalin D

NC_018592
(Listeria monocytogenes SLCC5850)

8e-97

72) M642_14000
( YP_008273579.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

1e-96

73) LMLG_0790
( YP_005970102.1 )

internalin D

NC_017547
(Listeria monocytogenes Finland 1988)

1e-96

74) M639_01170
( YP_008294881.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

1e-96

75) inlD
( YP_006677818.1 )

internalin D

NC_018586
(Listeria monocytogenes SLCC2540)

1e-96

76) MUO_01500
( YP_006204531.1 )

internalin D

NC_017728
(Listeria monocytogenes 07PF0776)

4e-96

77) inlD
( YP_002757005.1 )

internalin D

NC_012488
(Listeria monocytogenes Clip81459)

4e-96

78) inlD
( YP_006753397.1 )

internalin D (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

4e-96

79) LMOSLCC2376_0334
( YP_006689532.1 )

hypothetical protein

NC_018590
(Listeria monocytogenes SLCC2376)

7e-89

80) LMHCC_2280
( YP_002351232.1 )

internalin-A

NC_011660
(Listeria monocytogenes HCC23)

2e-87

81) lmo4a_0371
( YP_005925362.1 )

leucine-rich repeat domain protein (LPXTG motif)

NC_017529
(Listeria monocytogenes L99)

2e-87

82) LMM7_0382
( YP_005946446.1 )

hypothetical protein

NC_017537
(Listeria monocytogenes M7)

2e-87

83) LIV_2372
( YP_004856098.1 )

internalin peptidoglycan linked protein

NC_016011
(Listeria ivanovii PAM 55)

3e-86

84) LMOATCC19117_0379
( YP_006672180.1 )

hypothetical protein

NC_018584
(Listeria monocytogenes ATCC 19117)

5e-86

85) LM220_05057
( YP_008288562.1 )

internalin

NC_021830
(Listeria monocytogenes J1-220)

5e-86

86) LMOSLCC2540_0366
( YP_006677909.1 )

hypothetical protein

NC_018586
(Listeria monocytogenes SLCC2540)

5e-86

87) MUO_01955
( YP_006204614.1 )

internalin A

NC_017728
(Listeria monocytogenes 07PF0776)

6e-86

88) Lm4b_00372
( YP_002757087.1 )

internalin

NC_012488
(Listeria monocytogenes Clip81459)

6e-86

89) LMOL312_0352
( YP_006753481.1 )

leucine-rich repeat domain protein (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

6e-86

90) M643_12085
( YP_008281922.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

6e-86

91) M641_12050
( YP_008299909.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

6e-86

92) LMOSLCC2482_0356
( YP_006692309.1 )

hypothetical protein

NC_018591
(Listeria monocytogenes SLCC2482)

6e-86

93) LMOSLCC2755_0355
( YP_006680805.1 )

hypothetical protein

NC_018587
(Listeria monocytogenes SLCC2755)

6e-86

94) M637_04410
( YP_008274687.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

9e-86

95) M640_00680
( YP_008300691.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

1e-85

96) LM1816_05613
( YP_008286351.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

1e-85

97) M644_14260
( YP_008285432.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

1e-85

98) M645_01210
( YP_008303683.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

1e-85

99) LMOf2365_0374
( YP_012983.1 )

internalin

NC_002973
(Listeria monocytogenes F2365)

3e-85

100) M638_13605
( YP_008279330.1 )

internalin

NC_021825
(Listeria monocytogenes J2-1091)

3e-85

101) inlA_4
( YP_007013942.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

3e-85

102) LMOSLCC2378_0371
( YP_006675040.1 )

hypothetical protein

NC_018585
(Listeria monocytogenes SLCC2378)

3e-85

103) lwe1429
( YP_849626.1 )

internalin-like protein

NC_008555
(Listeria welshimeri SLCC5334)

3e-79

104) lse_0367
( YP_003463606.1 )

hypothetical protein

NC_013891
(Listeria seeligeri SLCC3954)

1e-76

• Sequence Alignments

1) LMRG_02647 in NC_017544


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

2) inlG in NC_003210


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

3) LMKG_01662 in NC_017546


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

4) inlG in NC_018588


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

5) inlG in NC_018589


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

6) inlG in NC_018592


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  730 bits (2763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/490 (100%), Positives = 490/490 (100%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

7) LMLG_0792 in NC_017547


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  729 bits (2758),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/490 (99%), Positives = 489/490 (99%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNII  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNI 
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

8) M642_13990 in NC_021823


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  729 bits (2758),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/490 (99%), Positives = 489/490 (99%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNII  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNI 
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

9) inlG in NC_013768


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  728 bits (2754),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/490 (99%), Positives = 489/490 (99%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNIVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTN+VAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFIINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQF INSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

10) inlG in NC_018593


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  728 bits (2754),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/490 (99%), Positives = 489/490 (99%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNIVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTN+VAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFIINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQF INSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

11) inlG in NC_013766


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  728 bits (2754),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/490 (99%), Positives = 489/490 (99%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNIVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTN+VAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVVV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFIINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQF INSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

12) M639_01180 in NC_021837


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  727 bits (2752),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/490 (99%), Positives = 489/490 (99%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVEV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENV V
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360
            DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480
            NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

13) inlG in NC_018590


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  715 bits (2704),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 466/490 (96%), Positives = 484/490 (99%), Gaps = 0/490 (0%)

Query  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60
            MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120
            LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTNLNYLDLRENQISDAS  180
            NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLT+LNYLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLINMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFTSPNIT  240
            PL+NMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTF+SPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WDLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVAV  300
            W+LDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENV V
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DSLITEPAAPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTAAFDVD  360
            D+LITEPA PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTA+FDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETIKQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGNEWNFATDKMPAGNVTLYARFTK  420
            GET +QKVDYQALLQEPTAPTKDGYTFVGWYDAKTGG EW+FAT KMP++++TLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NASSDNSQIAPGNDDKNDKDNLTIKANDSANATSTKLPKTSDDSSMIPTVLGTLFIGGAL  480
            N+SSDNSQ APG+DDKNDKD+LTIKANDSA+ATSTKLPKTSDDSSMIPT+LGTLFIGGA+
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

14) LM1816_16590 in NC_021829


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  688 bits (2600),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 438/490 (90%), Positives = 476/490 (98%), Gaps = 0/490 (0%)

Query  1    MKQRKTSLLHVLLVVTAILGISLWVNASHGMEAQAESIAQPAPINEIFTDPALAEAVKTE  60
            MKQRKTS+LHVLLVVTAILGISLWVNASHGM AQAESIAQPAPINEIFTDPALA+ VKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKADVSDVVSQADLDQITKIDAEGKGISSLEGIQYLTNLNSLSVTSNQISDISPLTNLT  120
            LGK+ V+D V+Q+DL+QITK++A++KGI+S+EGIQYLTNLN L+V+SNQI++I+PL+NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KLDSLYLGENQISDLTPLSRLTTLTFVQLSINQIKDVTPLANLTNLTYLDLRENQISDAS  180
            +LDSLYLG+N+ISD+TPLS LT LTFVQLSINQIKDVTPLANLT+L YLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTNLTVLHLEKQQITADPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMT+LTVLHLEKQQITA PVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVAV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENV V
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DSLITEPAAPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTAAFDVD  360
            D+LITEPA PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTA+FDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGNEWNFATDKMPAGDVTLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGG EW+FAT KMP++D+TLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NASSDNSQIAPGNDDKNDKDNLTIKANDSANATSTKLPKTSDDSSMVPTVLGTLFIGGAL  480
            N+SSDNSQ APG+DDKNDKD+LTIKANDSA+ATSTKLPKTSDDSSM+PT+LGTLFIGGA+
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

15) M640_00195 in NC_021839


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  688 bits (2600),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 438/490 (90%), Positives = 476/490 (98%), Gaps = 0/490 (0%)

Query  1    MKQRKTSLLHVLLVVTAILGISLWVNASHGMEAQAESIAQPAPINEIFTDPALAEAVKTE  60
            MKQRKTS+LHVLLVVTAILGISLWVNASHGM AQAESIAQPAPINEIFTDPALA+ VKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKADVSDVVSQADLDQITKIDAEGKGISSLEGIQYLTNLNSLSVTSNQISDISPLTNLT  120
            LGK+ V+D V+Q+DL+QITK++A++KGI+S+EGIQYLTNLN L+V+SNQI++I+PL+NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KLDSLYLGENQISDLTPLSRLTTLTFVQLSINQIKDVTPLANLTNLTYLDLRENQISDAS  180
            +LDSLYLG+N+ISD+TPLS LT LTFVQLSINQIKDVTPLANLT+L YLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTNLTVLHLEKQQITADPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMT+LTVLHLEKQQITA PVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVAV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENV V
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DSLITEPAAPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTAAFDVD  360
            D+LITEPA PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTA+FDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGNEWNFATDKMPAGDVTLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGG EW+FAT KMP++D+TLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NASSDNSQIAPGNDDKNDKDNLTIKANDSANATSTKLPKTSDDSSMVPTVLGTLFIGGAL  480
            N+SSDNSQ APG+DDKNDKD+LTIKANDSA+ATSTKLPKTSDDSSM+PT+LGTLFIGGA+
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

16) M644_14745 in NC_021827


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  688 bits (2600),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 438/490 (90%), Positives = 476/490 (98%), Gaps = 0/490 (0%)

Query  1    MKQRKTSLLHVLLVVTAILGISLWVNASHGMEAQAESIAQPAPINEIFTDPALAEAVKTE  60
            MKQRKTS+LHVLLVVTAILGISLWVNASHGM AQAESIAQPAPINEIFTDPALA+ VKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKADVSDVVSQADLDQITKIDAEGKGISSLEGIQYLTNLNSLSVTSNQISDISPLTNLT  120
            LGK+ V+D V+Q+DL+QITK++A++KGI+S+EGIQYLTNLN L+V+SNQI++I+PL+NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KLDSLYLGENQISDLTPLSRLTTLTFVQLSINQIKDVTPLANLTNLTYLDLRENQISDAS  180
            +LDSLYLG+N+ISD+TPLS LT LTFVQLSINQIKDVTPLANLT+L YLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTNLTVLHLEKQQITADPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMT+LTVLHLEKQQITA PVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVAV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENV V
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DSLITEPAAPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTAAFDVD  360
            D+LITEPA PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTA+FDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGNEWNFATDKMPAGDVTLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGG EW+FAT KMP++D+TLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NASSDNSQIAPGNDDKNDKDNLTIKANDSANATSTKLPKTSDDSSMVPTVLGTLFIGGAL  480
            N+SSDNSQ APG+DDKNDKD+LTIKANDSA+ATSTKLPKTSDDSSM+PT+LGTLFIGGA+
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

17) M645_00725 in NC_021840


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  688 bits (2600),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 438/490 (90%), Positives = 476/490 (98%), Gaps = 0/490 (0%)

Query  1    MKQRKTSLLHVLLVVTAILGISLWVNASHGMEAQAESIAQPAPINEIFTDPALAEAVKTE  60
            MKQRKTS+LHVLLVVTAILGISLWVNASHGM AQAESIAQPAPINEIFTDPALA+ VKTE
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   LGKADVSDVVSQADLDQITKIDAEGKGISSLEGIQYLTNLNSLSVTSNQISDISPLTNLT  120
            LGK+ V+D V+Q+DL+QITK++A++KGI+S+EGIQYLTNLN L+V+SNQI++I+PL+NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KLDSLYLGENQISDLTPLSRLTTLTFVQLSINQIKDVTPLANLTNLTYLDLRENQISDAS  180
            +LDSLYLG+N+ISD+TPLS LT LTFVQLSINQIKDVTPLANLT+L YLDLRENQISDAS
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  181  PLVNMTNLTVLHLEKQQITADPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240
            PLVNMT+LTVLHLEKQQITA PVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT
Sbjct  181  PLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNIT  240

Query  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYIttfdvdgttttENVAV  300
            WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENV V
Sbjct  241  WNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVV  300

Query  301  DSLITEPAAPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTAAFDVD  360
            D+LITEPA PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTA+FDVD
Sbjct  301  DTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVD  360

Query  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGNEWNFATDKMPAGDVTLYARFTK  420
            GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGG EW+FAT KMP++D+TLYARFTK
Sbjct  361  GETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTK  420

Query  421  NASSDNSQIAPGNDDKNDKDNLTIKANDSANATSTKLPKTSDDSSMVPTVLGTLFIGGAL  480
            N+SSDNSQ APG+DDKNDKD+LTIKANDSA+ATSTKLPKTSDDSSM+PT+LGTLFIGGA+
Sbjct  421  NPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAI  480

Query  481  LILRKKTTNI  490
            LILRKKTTNI
Sbjct  481  LILRKKTTNI  490

18) inlH in NC_003210


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  362 bits (1360),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 222/456 (49%), Positives = 324/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGTK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGG  
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTG  451
            WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV YQ+LL+EP APTKDGYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddpttntptgng----dgtSNPS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + +      N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (566),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

19) LMKG_01661 in NC_017546


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  362 bits (1360),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 222/456 (49%), Positives = 324/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGTK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGG  
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTG  451
            WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV YQ+LL+EP APTKDGYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddpttntptgng----dgtSNPS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + +      N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (566),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

20) inlH in NC_018588


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  362 bits (1360),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 222/456 (49%), Positives = 324/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGTK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGG  
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTG  451
            WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV YQ+LL+EP APTKDGYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddpttntptgng----dgtSNPS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + +      N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (566),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

21) inlH in NC_018589


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  362 bits (1360),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 222/456 (49%), Positives = 324/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGTK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGG  
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTG  451
            WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV YQ+LL+EP APTKDGYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddpttntptgng----dgtSNPS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + +      N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (566),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

22) inlC2 in NC_018590


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 220/426 (52%), Positives = 313/426 (74%), Gaps = 8/426 (1%)

Query  126  ELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGL  185
            EL+  ++ +  + ++L+ I  L+     I  +  +  L+NL++L +  NQIT+I+PLA L
Sbjct  60   ELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANL  119

Query  186  TNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQISDV  245
            TNL+ L +G+ ++SD+TPL+ L++LT ++   N+I D++PLA L +L  ++L++NQISD 
Sbjct  120  TNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDA  179

Query  246  SPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYASPNL  305
            SPL N+++L ++ L +Q IT  PV YQ NLV P+++K + G  ++P+TIS+NGT+ASPN+
Sbjct  180  SPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNI  239

Query  306  TWNLTSFINNVSYTFNQSVTF-KNTTVPFSGTVTQPLTEA---YTAVFDVDGKQTSMTVG  361
            TWNL SF ++VSY FNQ +T+  N  V F+GTV QP+ EA   Y + FDVDG  T+  V 
Sbjct  240  TWNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVV  299

Query  362  ANELIKEPAAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFTINSYTASFDN  421
             + LI EPA PTKEGYTF+GWYDA TGGN WDF+ DKMPA N+TLYAQFTINSYTA+FD 
Sbjct  300  VDTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDV  359

Query  422  DGKITTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFT  481
            DG  T QKV YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FT
Sbjct  360  DGETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFT  419

Query  482  Kndspnpndptpntptgng----dgtsnpSNSGGNTTLPTAGDENTMLPIFVGVFLLGTA  537
            KN S++ ++ +P     N+       +N S  + +T LP ++D+++M+P ++G +++G A
Sbjct  420  KNPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGA  479

Query  538  TLILRK  543
             LILRK
Sbjct  480  ILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 104/201 (52%), Positives = 148/201 (74%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITNLTPLKNLT  120
             GK++VTD VTQ+DL+ I  L A + G+ +IEGIQYL NL  L +  NQITN+TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNTQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

23) MUO_01495 in NC_017728


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGSSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

24) inlH in NC_012488


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGSSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

25) inlC2 in NC_018642


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGSSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

26) inlC2 in NC_018587


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDFA DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFSKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+F+KN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (578),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 101/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DV+PLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

27) inlC2 in NC_002973


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGSSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

28) inlA in NC_019556


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGSSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

29) inlC2 in NC_018591


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDFA DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFSKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+F+KN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (578),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 101/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DV+PLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

30) inlC2 in NC_018585


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGSSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

31) M638_14050 in NC_021825


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGSSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

32) M643_11650 in NC_021826


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDFA DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFSKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+F+KN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (578),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 101/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DV+PLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

33) M641_12485 in NC_021838


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDFA DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFSKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+F+KN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  157 bits (578),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 101/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DV+PLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

34) inlC2 in NC_018584


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  359 bits (1348),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVAPLAGLSNLQVLYLDLNQITDLSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQIT+++PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  156 bits (577),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DV+PLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  LSPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

35) LM220_01592 in NC_021830


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  359 bits (1348),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVAPLAGLSNLQVLYLDLNQITDLSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQIT+++PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  156 bits (577),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DV+PLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  LSPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

36) M637_03935 in NC_021824


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  359 bits (1349),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 328/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVAPLAGLSNLQVLYLDLNQITDLSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQIT+++PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTATFD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (564),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 101/201 (51%), Positives = 148/201 (74%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDLALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF D ALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DV+PLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  LSPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

37) LMOG_02567 in NC_017545


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  359 bits (1348),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 218/426 (52%), Positives = 313/426 (74%), Gaps = 8/426 (1%)

Query  126  ELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGL  185
            EL+  ++ +  + ++L+ I  L+     I  +  +  L+NL++L +  NQIT+I+PLA L
Sbjct  60   ELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANL  119

Query  186  TNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQITDI  245
            TNL+ L +G+ ++SD+TPL+ L++LT ++   N+I D++PLA L +L  ++L++NQI+D 
Sbjct  120  TNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDA  179

Query  246  SPLANISNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYASPNL  305
            SPL N+++L ++ L +Q IT  PV YQ NLV P+++K + G  ++P+TIS+NGT+ASPN+
Sbjct  180  SPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNI  239

Query  306  TWNLTSFINNVSYTFNQSVTF-KNTTVPFSGTVTQPLTEA---YTAVFDVDGKQTSMTVG  361
            TWNL SF ++VSY FNQ +T+  N  V F+GTV QP+ EA   Y + FDVDG  T+  V 
Sbjct  240  TWNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVV  299

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFTINSYTASFDN  421
             + LI EP+ PTKEGYTF+GWYDA TGGN WDF+ DKMPA N+TLYAQFTINSYTA+FD 
Sbjct  300  VDTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDV  359

Query  422  DGKITTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFT  481
            DG  T QKV YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FT
Sbjct  360  DGETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFT  419

Query  482  Kndspnpndptpntptgng----dgtsnpSNSGGNTTLPTAGDENTMLPIFIGVFLLGTA  537
            KN S++ ++ +P     N+       +N S  + +T LP ++D+++M+P ++G +++G A
Sbjct  420  KNPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGA  479

Query  538  TLILRK  543
             LILRK
Sbjct  480  ILILRK  485


 Score =  157 bits (581),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 104/201 (52%), Positives = 148/201 (74%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITNLTPLKNLT  120
             GK++VTD VTQ+DL+ I  L A + G+ +IEGIQYL NL  L +  NQITN+TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNTQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

38) LM1816_09035 in NC_021829


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRA  215
             +  +  L+NL++L +  NQIT+I+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSMTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  156 bits (574),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 148/201 (74%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I  L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNTQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

39) M640_00200 in NC_021839


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRA  215
             +  +  L+NL++L +  NQIT+I+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSMTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  156 bits (574),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 148/201 (74%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I  L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNTQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

40) M644_14740 in NC_021827


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRA  215
             +  +  L+NL++L +  NQIT+I+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSMTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  156 bits (574),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 148/201 (74%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I  L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNTQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

41) M645_00730 in NC_021840


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRA  215
             +  +  L+NL++L +  NQIT+I+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSMTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  156 bits (574),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 148/201 (74%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I  L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNTQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

42) LMRG_02646 in NC_017544


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  358 bits (1346),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 225/456 (50%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNIVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+I+K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFGVDKMPAENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKG  451
            WDF+VDKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (565),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

43) inlC2 in NC_018592


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  358 bits (1346),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 225/456 (50%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNIVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+I+K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFGVDKMPAENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKG  451
            WDF+VDKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (565),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

44) inlC2 in NC_018593


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  358 bits (1346),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 224/456 (50%), Positives = 325/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFATDKMPAENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPVAPTKDGYTFTG  451
            WDFA DKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP APTKDGYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGNKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGG  WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  155 bits (573),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 99/201 (50%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVLKIVLMVTAILSISLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SVL ++L+VTAIL+ISL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

45) M639_01175 in NC_021837


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  358 bits (1346),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 225/456 (50%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNIVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+I+K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFGVDKMPAENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKG  451
            WDF+VDKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (565),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

46) inlC2 in NC_018586


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  358 bits (1346),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVAPLAGLSNLQVLYLDLNQITDLSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRA  215
             +  +  L+NL++L +  NQIT+++PLA LTNL+ L +G+N+++D+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N+++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +++  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFSTDKMPAENITLYAQFTINSYTAKFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKG  451
            WDF+ DKMPA N+TLYAQFTINSYTA FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  DSGGNTTLPTTGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP T+D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  156 bits (577),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 102/201 (51%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTA  60
            MK+R  SV+ ++L+V+AILGISL V +S+G   +AESIAQP+PIN IF DPALA+ VKT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   TGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ I+ L A + G+ +IEGIQYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDL--NQITD  178
            ++  L L++N + +V++++GL  +  ++L+  QI DV+PLA L++L+  YLDL  NQI+D
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  LSPLAGLTNLQYLSIGNNQVN  199
             SPL  +T+L  L + ++Q+ 
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

47) inlC2 in NC_013768


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  358 bits (1345),  Expect = 4e-100, Method: Compositional matrix adjust.
 Identities = 225/456 (50%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNIVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+I+K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFGVDKMPAENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKG  451
            WDF+VDKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (564),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGFSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

48) inlC2 in NC_013766


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  358 bits (1345),  Expect = 4e-100, Method: Compositional matrix adjust.
 Identities = 225/456 (50%), Positives = 327/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNIVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+I+K + G  ++P+TIS+NGT+ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA TGGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFGVDKMPAENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKG  451
            WDF+VDKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGTKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGGT WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  153 bits (564),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 98/201 (49%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVFKLVLMVTAILGFSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SV+ ++L+VTAILG+SL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

49) LMLG_0791 in NC_017547


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  355 bits (1335),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 324/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGIYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NG +ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKIGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA  GGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFGVDKMPAENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKG  451
            WDF+VDKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGNKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGG  WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  155 bits (573),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 99/201 (50%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVLKIVLMVTAILSISLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SVL ++L+VTAIL+ISL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

50) M642_13995 in NC_021823


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  355 bits (1335),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 221/456 (49%), Positives = 324/456 (72%), Gaps = 14/456 (3%)

Query  102  GLELKDNQITDLTPLKN------LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQIT  155
            G+  + + I++ +P+++      L+     EL+  ++ +  + ++L+ I  L+     I 
Sbjct  30   GMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGIN  89

Query  156  DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKA  215
             +  +  L+NL++L +  NQITNI+PLA LTNL+ L +G+ ++SD+TPL+ L++LT ++ 
Sbjct  90   SIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQL  149

Query  216  DDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNL  275
              N+I D++PLA+L +L  ++L++NQISD SPL N ++L ++ L +Q IT  PV YQ NL
Sbjct  150  SINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

Query  276  VVPNVVKGPSGAPIAPATISDNGIYASPNLTWNLTSFINNVSYTFNQSVTF-KNTTVPFS  334
            V P+++K + G  ++P+TIS+NG +ASPN+TWNL SF ++VSY FNQ +T+  N  V F+
Sbjct  210  VAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFA  269

Query  335  GTVTQPLTEA---YTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKIGGNK  391
            GTV QP+ EA   Y + FDVDG  T+  V  + LI EP+ PTKEGYTF+GWYDA  GGN 
Sbjct  270  GTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNE  329

Query  392  WDFGVDKMPAENITLYAQFTINSYTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKG  451
            WDF+VDKMPA N+TLYAQFTINSYTA+FD DG  T QKV YQ+LL+EP+APTK GYTF G
Sbjct  330  WDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVG  389

Query  452  WYDAKTGGNKWDFATGKMPAGNITLYAQFTKndspnpndptpntptgng----dgtsnpS  507
            WYDAKTGG  WDFAT+KMP+++ITLYA+FTKN S++ ++ +P     N+       +N S
Sbjct  390  WYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDS  449

Query  508  NSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  543
              + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  450  ADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  155 bits (573),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 99/201 (50%), Positives = 149/201 (75%), Gaps = 4/201 (1%)

Query  1    MKKRWNSVLKIVLMVTAILSISLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIA  60
            MK+R  SVL ++L+VTAIL+ISL V +S+G+  +AESI+QP++IN IF DPALA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  61   AGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLT  120
             GK++VTD VTQ+DL+ IT L A + G+ +IEG+QYL NL  L +  NQIT++TPL NLT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  121  KITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDL--NQITN  178
            ++  L L++N + +V++++GL  +  ++L+  QI DVTPLA L++L+  YLDL  NQI++
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLN--YLDLRENQISD  178

Query  179  ISPLAGLTNLQYLSIGNAQVS  199
             SPL  +T+L  L + + Q++
Sbjct  179  ASPLVNMTDLTVLHLEKQQIT  199

51) inlD in NC_018590


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  348 bits (1308),  Expect = 4e-97, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 310/416 (75%), Gaps = 15/416 (3%)

Query  160  SNLNNLETIELSNNQITDISPISGLKNLIGLGIDNNKISDLSPISGLSKLNHLTADNNQI  219
            ++LN++  +E  ++ I  I  I  L NL  LG+ +N+I++++P++ L++L+ L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDGNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI+WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGIKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGG  WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  215 bits (800),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 156/443 (36%), Positives = 270/443 (61%), Gaps = 31/443 (6%)

Query  1    MKRNKKALRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKATL  60
             +R+   L++L+ ++ +++IS+WV +S     QA  IAQP+PINEIFTD  LA+ +K+ L
Sbjct  2    KQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTEL  61

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYLNNIDTLVLNNNKITTLNPLAGLSR  120
             K S T +V+Q++L+ I+ + A+   I S+EG QYL N++ L +++N+IT + PLA L+ 
Sbjct  62   GKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTN  121

Query  121  LSILELSNNQLNDISALSNVTNLHQLRLDGNQIKQLNGVSNLNNLETIELSNNQITDISP  180
            L  L L++N+++D+++LS +T+L  ++L  NQIK++  ++NL +L+ ++L +NQI+D SP
Sbjct  122  LDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASP  181

Query  181  ISGLKNLIGLGIDNNKISDLSPI--SGLSKLNHLTADNNQISDLSPISSLGAMEIMRLDG  238
            +  + +L  L +++++I+  + +  + L   + L     ++   + IS+ G+     + +
Sbjct  182  LVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGT-----FAS  236

Query  239  NQIS-DVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ  297
             +I+ ++ +++  +++SY F     ++D + +        F G  +  Q I   PV Y  
Sbjct  237  PNITWNLDSFT--SEVSYDFNQKITLGDNGKV-------TFAGTVV--QPIVEAPVNYIT  285

Query  298  ELVVPNNIKDE---MGALISPDTISDNGVYASPNISWNLANYTNQVS---YTFNKQLAQG  351
             + V      E   +++LI+  + + +  Y+ +  +W    Y  + +     F  +   +
Sbjct  286  TFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAETGGNEWDFAVDKMPA  339

Query  352  SFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGIK  411
            +     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+GYTF GWYDAKTGG  
Sbjct  340  TNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTE  399

Query  412  WDFATDKMPAEDITLYAQFTINS  434
            WDFAT KMP+ DITLYA+FT N+
Sbjct  400  WDFATSKMPTSDITLYARFTKNP  422

52) LM1816_16585 in NC_021829


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  348 bits (1306),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 210/416 (51%), Positives = 311/416 (75%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI+WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVIQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV+QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtsnpsnsggnttLPTAGDENTMLPIFVGVFLLGTAMLILRK  563
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A+LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  197 bits (730),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 165/462 (36%), Positives = 269/462 (59%), Gaps = 68/462 (14%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKAT  59
            MK+ KT+ L++L+ ++ +++IS+WV +S     QA  IAQP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+QT+L+ I  + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  238  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNISWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +  +W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  340  VS-----YTFNKQLAQGS--FSGTVIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAP  392
             +     ++ +K  A     ++   I    N+YTATFDVDG  TN+ V+   LLQEPTAP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTI----NSYTATFDVDGETTNQKVDYQALLQEPTAP  380

Query  393  TKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            TK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  381  TKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

53) M640_00205 in NC_021839


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  348 bits (1306),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 210/416 (51%), Positives = 311/416 (75%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI+WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVIQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV+QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtsnpsnsggnttLPTAGDENTMLPIFVGVFLLGTAMLILRK  563
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A+LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  197 bits (730),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 165/462 (36%), Positives = 269/462 (59%), Gaps = 68/462 (14%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKAT  59
            MK+ KT+ L++L+ ++ +++IS+WV +S     QA  IAQP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+QT+L+ I  + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  238  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNISWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +  +W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  340  VS-----YTFNKQLAQGS--FSGTVIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAP  392
             +     ++ +K  A     ++   I    N+YTATFDVDG  TN+ V+   LLQEPTAP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTI----NSYTATFDVDGETTNQKVDYQALLQEPTAP  380

Query  393  TKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            TK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  381  TKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

54) M644_14735 in NC_021827


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  348 bits (1306),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 210/416 (51%), Positives = 311/416 (75%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI+WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVIQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV+QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtsnpsnsggnttLPTAGDENTMLPIFVGVFLLGTAMLILRK  563
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A+LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  197 bits (730),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 165/462 (36%), Positives = 269/462 (59%), Gaps = 68/462 (14%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKAT  59
            MK+ KT+ L++L+ ++ +++IS+WV +S     QA  IAQP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+QT+L+ I  + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  238  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNISWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +  +W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  340  VS-----YTFNKQLAQGS--FSGTVIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAP  392
             +     ++ +K  A     ++   I    N+YTATFDVDG  TN+ V+   LLQEPTAP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTI----NSYTATFDVDGETTNQKVDYQALLQEPTAP  380

Query  393  TKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            TK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  381  TKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

55) M645_00735 in NC_021840


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  348 bits (1306),  Expect = 5e-97, Method: Compositional matrix adjust.
 Identities = 210/416 (51%), Positives = 311/416 (75%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI+WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVIQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV+QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtsnpsnsggnttLPTAGDENTMLPIFVGVFLLGTAMLILRK  563
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A+LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  197 bits (730),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 165/462 (36%), Positives = 269/462 (59%), Gaps = 68/462 (14%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKAT  59
            MK+ KT+ L++L+ ++ +++IS+WV +S     QA  IAQP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+QT+L+ I  + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  238  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNISWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +  +W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  340  VS-----YTFNKQLAQGS--FSGTVIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAP  392
             +     ++ +K  A     ++   I    N+YTATFDVDG  TN+ V+   LLQEPTAP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTI----NSYTATFDVDGETTNQKVDYQALLQEPTAP  380

Query  393  TKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            TK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  381  TKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

56) inlD in NC_018593


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  348 bits (1305),  Expect = 6e-97, Method: Compositional matrix adjust.
 Identities = 209/418 (50%), Positives = 305/418 (73%), Gaps = 15/418 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRKTS  564
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK +
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRKKT  487


 Score =  200 bits (742),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 164/465 (36%), Positives = 270/465 (59%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGKS-SKEVQAAEIGQPTPINEIFTDENLANAIKIT  58
            MK+ KT+ L++L+ ++ +++IS+WV  S +   QA  I+QP+PINEIFTD  LA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPNTTSDVSQTELDSISEVTAESSNIASLEGVQYlnnldtlvlnnnKITTLNPLAGLT  118
            L+K + T +V+QT+L+ I+ + A+   I S+EG+QY                      LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +L++L  S+NQ+++I++L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

57) LM220_17725 in NC_021830


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (735),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

58) inlD in NC_018587


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  199 bits (738),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 164/458 (36%), Positives = 267/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LHILVTLAVVMVISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ LH+L+ ++ ++ IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

59) inlD in NC_002973


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (735),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

60) inlA_2 in NC_019556


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (735),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

61) inlD in NC_018591


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  199 bits (738),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 164/458 (36%), Positives = 267/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LHILVTLAVVMVISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ LH+L+ ++ ++ IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

62) inlD in NC_018585


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (735),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

63) M637_03940 in NC_021824


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (735),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

64) M638_14045 in NC_021825


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (735),  Expect = 7e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

65) M643_11655 in NC_021826


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  199 bits (738),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 164/458 (36%), Positives = 267/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LHILVTLAVVMVISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ LH+L+ ++ ++ IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

66) M641_12480 in NC_021838


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1302),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  199 bits (738),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 164/458 (36%), Positives = 267/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LHILVTLAVVMVISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ LH+L+ ++ ++ IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

67) inlD in NC_013768


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1304),  Expect = 7e-97, Method: Compositional matrix adjust.
 Identities = 209/416 (51%), Positives = 304/416 (74%), Gaps = 15/416 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  562
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 163/465 (36%), Positives = 268/465 (58%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTS-SKEVQAAEIGQPTPINEIFTDENLANAIKTT  58
            MK+ KT+ L++L+ ++ +++IS+WV +S +   QA  I+QP+PINEIFTD  LA+ +KT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLS  118
            L+K S +  V+Q +L+ +  + A+   I S+EG+QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +LN+L  S+NQ+++I +L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

68) inlD in NC_013766


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1304),  Expect = 7e-97, Method: Compositional matrix adjust.
 Identities = 209/416 (51%), Positives = 304/416 (74%), Gaps = 15/416 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  562
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 163/465 (36%), Positives = 268/465 (58%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTS-SKEVQAAEIGQPTPINEIFTDENLANAIKTT  58
            MK+ KT+ L++L+ ++ +++IS+WV +S +   QA  I+QP+PINEIFTD  LA+ +KT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLS  118
            L+K S +  V+Q +L+ +  + A+   I S+EG+QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +LN+L  S+NQ+++I +L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

69) LMRG_02851 in NC_017544


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1303),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 209/416 (51%), Positives = 304/416 (74%), Gaps = 15/416 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  562
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 163/465 (36%), Positives = 269/465 (58%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTS-SKEVQAAEIGQPTPINEIFTDENLANAIKTT  58
            MK+ KT+ L++L+ ++ +++IS+WV +S +   QA  I+QP+PINEIFTD  LA+ +KT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLT  118
            L+K S +  V+Q +L+ +  + A+   I S+EG+QY                      LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +L++L  S+NQ+++I++L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

70) LMOG_02566 in NC_017545


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1303),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 209/416 (51%), Positives = 304/416 (74%), Gaps = 15/416 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  562
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 164/465 (36%), Positives = 269/465 (58%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGKS-SKEVQAAEIGQPTPINEIFTDENLANAIKIT  58
            MK+ KT+ L++L+ ++ +++IS+WV  S +   QA  I+QP+PINEIFTD  LA+ +K  
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPNTTSDVSQTELDSISEVTAESSNIASLEGTQYlnnldtlvlnnnKITTLNPLAGLT  118
            L+K + T +V+QT+L+ I+ + A+   I S+EG QY                      LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +L++L  S+NQ+++I++L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

71) inlD in NC_018592


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  347 bits (1303),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 209/416 (51%), Positives = 304/416 (74%), Gaps = 15/416 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  562
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 163/465 (36%), Positives = 269/465 (58%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTS-SKEVQAAEIGQPTPINEIFTDENLANAIKTT  58
            MK+ KT+ L++L+ ++ +++IS+WV +S +   QA  I+QP+PINEIFTD  LA+ +KT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLT  118
            L+K S +  V+Q +L+ +  + A+   I S+EG+QY                      LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +L++L  S+NQ+++I++L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

72) LMLG_0790 in NC_017547


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  346 bits (1300),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 303/416 (73%), Gaps = 15/416 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGG  WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  562
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  199 bits (740),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 165/465 (36%), Positives = 269/465 (58%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTS-SKEVQAAEIGQPTPINEIFTDENLANAIKTT  58
            MK+ KT+ L++L+ ++ +++IS+WV +S +   QA  I+QP+PINEIFTD  LA+ +KT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLT  118
            L+K S +  V+Q +L+ +  + A+   I S+EG+QY                      LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +LN+L  S+NQ+++I +L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGGT WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

73) inlD in NC_018586


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  346 bits (1301),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 207/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNITLYAQFTKNATPDSndp  511
            YQ+LL+EP+APTKDGYTF+GWYDAKTGGT WDFAT KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnATLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + ++ LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 6e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

74) M642_14000 in NC_021823


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  346 bits (1300),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 303/416 (73%), Gaps = 15/416 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGG  WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  562
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  199 bits (740),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 165/465 (36%), Positives = 269/465 (58%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTS-SKEVQAAEIGQPTPINEIFTDENLANAIKTT  58
            MK+ KT+ L++L+ ++ +++IS+WV +S +   QA  I+QP+PINEIFTD  LA+ +KT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLT  118
            L+K S +  V+Q +L+ +  + A+   I S+EG+QY                      LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +LN+L  S+NQ+++I +L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGGT WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

75) M639_01170 in NC_021837


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  346 bits (1300),  Expect = 1e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 303/416 (73%), Gaps = 15/416 (3%)

Query  159  SNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQI  218
            ++L ++  +E  ++ I +I  +  L NL  LG+ +N+I++++P++ L++L+ L  + N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  219  SDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFF  278
            SD+ PLS L+ +  ++L  NQI DVTP+ANL++LNY+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  279  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQ  338
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P+TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  339  VSYTFNKQLAYG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEAVEETKLLQEPIA  390
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP  
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  391  PTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  450
            PTKEGYTF+GWYDA TGG  WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  451  YQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKndnpnpddp  510
            YQ+LL+EP APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN +++  + 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  511  ttntptgng----dgtSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRK  562
            +      N+       +N S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  199 bits (740),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 165/465 (36%), Positives = 269/465 (58%), Gaps = 75/465 (16%)

Query  1    MKRNKTA-LRILVTLAVVMAISFWVGTS-SKEVQAAEIGQPTPINEIFTDENLANAIKTT  58
            MK+ KT+ L++L+ ++ +++IS+WV +S +   QA  I+QP+PINEIFTD  LA+ +KT 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  59   LSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLT  118
            L+K S +  V+Q +L+ +  + A+   I S+EG+QY                      LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  119  KLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAIS  178
            +LN+L  S+NQ+++I +L+N+TNL+ L L++N+I ++  +S L +L  ++LS NQI  ++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  179  PVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPL--SNLAAMEVMRLD  236
            P++ L +L  L++ +N+ISD SP+  ++ L  L  + +QI+    +  +NL A ++++  
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILK--  216

Query  237  GNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  284
             N  ++V P + ++N    F + N   ++ S    F S   ++    ITL++        
Sbjct  217  -NAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  285  ---QKITSEPVLYQQELVVPNNIKDE---MGALIAPATISDNGVYASPNINWNLPNYTNQ  338
               Q I   PV Y   + V      E   +++LI+ ++ + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFS--GW----YDAE  324

Query  339  VS-----YTFNKQLA-----YGSFSGTVTQPLHNAYTATFDVDGVKTNEAVEETKLLQEP  388
             +     ++ +K  A     Y+ F+        N+YTATFDVDG  TN+ V+   LLQEP
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFT-------INSYTATFDVDGETTNQKVDYQALLQEP  377

Query  389  IAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINS  433
             APTK+GYTF GWYDAKTGGT WDFAT KMP+ DITLYA+FT N+
Sbjct  378  TAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

76) MUO_01500 in NC_017728


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  345 bits (1295),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

77) inlD in NC_012488


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  345 bits (1295),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

78) inlD in NC_018642


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  345 bits (1295),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 307/416 (74%), Gaps = 15/416 (3%)

Query  160  SNLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQI  219
            ++L ++  +E  ++ I  I  +  L NL  LG+  N+I++++P+A L++L  L  ++N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  220  SDLSPISSLGAMEIMRLDKNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFF  279
            SD++P+S+L  + +++L  NQI DVTP+ANL++L+Y+ L ENQISD S   PL N  ++ 
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS---PLVNMTDLT  189

Query  280  GITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQ  339
             + L++Q+IT+ PV+YQ +LV P+ +K+  G +++P TIS+NG +ASPNI WNL ++T++
Sbjct  190  VLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSE  249

Query  340  VSYTFNKQLAQG-----SFSGTVTQPLHNA---YTATFDVDGVKTNEVVEETKLLQEPTA  391
            VSY FN++++ G     +F+GTV QP+ +A   Y +TFDVDG  T E V    L+ EP+ 
Sbjct  250  VSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAE  309

Query  392  PTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVT  451
            PTKEGYTF+GWYDA TGGN WDFA DKMPA ++TLYAQFTINSYTATFD+DG  T QKV 
Sbjct  310  PTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVD  369

Query  452  YQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDSNDp  511
            YQ+LL+EP+APTKDGYTF GWYDAKTGGT WDFAT+KMP+++ITLYA+FTKN+++D+++ 
Sbjct  370  YQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQT  429

Query  512  ttvtptgng----ngtstpsnsggnttLPTAGDENTMLPIFVGVFLLGTATLILRK  563
            +      N+       +  S  + +T LP ++D+++M+P ++G +++G A LILRK
Sbjct  430  APGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRK  485


 Score =  198 bits (736),  Expect = 5e-52, Method: Compositional matrix adjust.
 Identities = 163/458 (36%), Positives = 268/458 (59%), Gaps = 60/458 (13%)

Query  1    MKRKKTA-LRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKAT  59
            MK++KT+ L++L+ ++ +++IS+WV +S     QA  I QP+PINEIFTD  LA+ +K+ 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  60   LNKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLS  119
            L K S T +V+Q++L+ I+ + A+   I S+EG QY                      L+
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY----------------------LT  98

Query  120  KLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDIS  179
            +L +L  + NQ+++I++LAN+T+L+ L L++N+I ++  +S L +L  ++LS NQI D++
Sbjct  99   NLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  180  PVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPI--SSLGAMEIMRLD  237
            P++ L +L  L++  N+ISD SP+  ++ L+ L  +++QI+  + +  ++L A +I+   
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDIL---  215

Query  238  KNQISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFG----ITLDN--------  285
            KN  ++V P + ++N +  F + N   ++ S    F S   ++    ITL++        
Sbjct  216  KNAYGEVVPPTTISNNG-TFASPNITWNLDS----FTSEVSYDFNQKITLGDNGKVTFAG  270

Query  286  ---QKITSEPVLYQQELVVPNNIKDE---MGALISPDTISDNGVYASPNIKWNLANYTNQ  339
               Q I   PV Y   + V      E   +++LI+  + + +  Y+ +   W    Y  +
Sbjct  271  TVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG--W----YDAE  324

Query  340  VS---YTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEG  396
             +     F  +   ++     +Q   N+YTATFDVDG  TN+ V+   LLQEPTAPTK+G
Sbjct  325  TGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDG  384

Query  397  YTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINS  434
            YTF GWYDAKTGG  WDFAT KMP+ DITLYA+FT N+
Sbjct  385  YTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

79) LMOSLCC2376_0334 in NC_018590


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  321 bits (1204),  Expect = 7e-89, Method: Compositional matrix adjust.
 Identities = 190/416 (46%), Positives = 295/416 (71%), Gaps = 6/416 (1%)

Query  178  NNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSANQI  237
             +L+Q+  L+   + + +++ +Q L+NL +L  + NQI N+  ++ L NL  L L+ N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  238  GDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQ  297
            +D TPL+GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT+++
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLH  192

Query  298  MTNQLIVNEPISFESTITIPNLIKNIAEQTIDPDTISDNGVYANESVTWNLPTFIPKVSY  357
            + +Q I   P+ +++ +  P+++KN   + + P TIS+NG +A+ ++TWNL +F + VSY
Sbjct  193  LEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSY  252

Query  358  TFNERDTVG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPAIPVK  413
             FN++ T+G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EPA P K
Sbjct  253  DFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTK  312

Query  414  EGYTFNGWYDAETGGTKWDFTADTMPVNDITLYAQFSINSYTATFDVDGVISTQTVDYQG  473
            EGYTF+GWYDAETGG  WDF+ D MP  ++TLYAQF+INSYTATFDVDG  + Q VDYQ+
Sbjct  313  EGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQA  372

Query  474  LLEEPPAPTKEGYTFKGWYDAKSGGTKWDFTNNQMPAKDITLYAQFSKDAAsggdgggtd  533
            LL+EP APTK+GYTF GWYDAK+GGT WDF+ ++MP+ DITLYA+F+K+++S+    + +
Sbjct  373  LLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPG  432

Query  534  egggnsenstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
             ++ N  +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  433  KDDKNDKDKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  169 bits (626),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 152/469 (33%), Positives = 267/469 (57%), Gaps = 63/469 (13%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDNALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILSGNQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL                    
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN-------------------  101

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYDNQLENLS  175
               ML +S+N I++I++L+NL NL++L + D +I+D+TPLSGLT+L  + L  NQ+ +++
Sbjct  102  ---MLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  176  GVNNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSAN  235
             + NL +L  L++  N++++   L  +++L VL  + +QI     +    NL   D+  N
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQ-TNLVAPDILKN  217

Query  236  QIGDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTI  295
              G+  P + ++N  T + S N   ++ +++S ++ D     ++KI+    L    K+T+
Sbjct  218  AYGEVVPPTTISNNGT-FASPNITWNLDSFTSEVSYD----FNQKIT----LGDNGKVTF  268

Query  296  IQMTNQLIVNEPISFESTITIPNLIKNIAEQTIDPDTISDNGVYANESVTWNLPTFIPKV  355
                 Q IV+ P+++ +T+ +        + T   + +  + + ++       P+   K 
Sbjct  269  AGTVVQPIVEAPVNYITTFDV--------DGTTTTENVVVDTLITE-------PAEPTKE  313

Query  356  SYTFN---ERDTVGN----ATGNFSGTVEQPLVQY----FKATFNIDGQETTENVETGTL  404
            +YTF+   + +T GN    A ++ ++T      Q+    + ATF++DG+ T ++V+  +L
Sbjct  314  GYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQAL  373

Query  405  LQEPAIPVKEGYTFNGWYDAETGGTKWDFTADTMPVNDITLYAQFSINS  453
            LQEP+ P K+GYTF GWYDA TGGT WDF++  MP +DITLYA+F+ N+
Sbjct  374  LQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

80) LMHCC_2280 in NC_011660


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  316 bits (1184),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 188/416 (46%), Positives = 295/416 (71%), Gaps = 6/416 (1%)

Query  178  NNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSANQI  237
             +L+Q+  L+   + + +++ +Q L+NL +L  + NQI N+  ++ L NL  L L+ N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  238  VDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQ  297
             D TPL+GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT+++
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLH  192

Query  298  MTNQLIVNEPISFESTITIPNLIKNIAEQTIDPDTISDNGVYANESVTWNLPTYIPKVSY  357
            + +Q I   P+ +++ +  P+++KN   + + P TIS+NG +A+ ++TWNL ++ + VSY
Sbjct  193  LEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSY  252

Query  358  TFIERDTVG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVK  413
             F ++ T+G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P K
Sbjct  253  DFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTK  312

Query  414  EGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQTVDYQG  473
            EGYTF+GWYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q VDYQ+
Sbjct  313  EGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQA  372

Query  474  LLEEPPAPTKEGYTFKGWYDAKSGGTKWDFTNNQMPAKDITLYAQFSKdaasggddggtd  533
            LL+EP APTK+GYTF GWYDAK+GGT WDF+ ++MP+ DITLYA+F+K+++S+  + + +
Sbjct  373  LLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPG  432

Query  534  egggnsenstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
             ++ N  +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  433  KDDKNDKDKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  166 bits (615),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 151/469 (33%), Positives = 266/469 (57%), Gaps = 63/469 (13%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDNALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILSGNQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL                    
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN-------------------  101

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYDNQLENLS  175
               ML +S+N I++I++L+NL NL++L + D +I+D+TPLSGLT+L  + L  NQ+ +++
Sbjct  102  ---MLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  176  GVNNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSAN  235
             + NL +L  L++  N++++   L  +++L VL  + +QI     +    NL   D+  N
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQ-TNLVAPDILKN  217

Query  236  QIVDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTI  295
               +  P + ++N  T + S N   ++ +++S ++ D     ++KI+    L    K+T+
Sbjct  218  AYGEVVPPTTISNNGT-FASPNITWNLDSFTSEVSYD----FNQKIT----LGDNGKVTF  268

Query  296  IQMTNQLIVNEPISFESTITIPNLIKNIAEQTIDPDTISDNGVYANESVTWNLPTYIPKV  355
                 Q IV+ P+++ +T+ +        + T   + +  + + ++       P+   K 
Sbjct  269  AGTVVQPIVEAPVNYITTFDV--------DGTTTTENVVVDTLITE-------PAEPTKE  313

Query  356  SYTFI---ERDTVGN----ATGNFSGTVEQPLVQY----FKATFNIDGQETTENVETGTL  404
            +YTF    + +T GN    A ++ ++T      Q+    + ATF++DG+ T ++V+  +L
Sbjct  314  GYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQAL  373

Query  405  LQEPPTPVKEGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINS  453
            LQEP +P K+GYTF GWYDA TGGT WDF++  MP++DITLYA+F+ N+
Sbjct  374  LQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

81) LMM7_0382 in NC_017537


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  316 bits (1184),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 188/416 (46%), Positives = 295/416 (71%), Gaps = 6/416 (1%)

Query  178  NNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSANQI  237
             +L+Q+  L+   + + +++ +Q L+NL +L  + NQI N+  ++ L NL  L L+ N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  238  VDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQ  297
             D TPL+GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT+++
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLH  192

Query  298  MTNQLIVNEPISFESTITIPNLIKNIAEQTIDPDTISDNGVYANESVTWNLPTYIPKVSY  357
            + +Q I   P+ +++ +  P+++KN   + + P TIS+NG +A+ ++TWNL ++ + VSY
Sbjct  193  LEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSY  252

Query  358  TFIERDTVG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVK  413
             F ++ T+G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P K
Sbjct  253  DFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTK  312

Query  414  EGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQTVDYQG  473
            EGYTF+GWYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q VDYQ+
Sbjct  313  EGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQA  372

Query  474  LLEEPPAPTKEGYTFKGWYDAKSGGTKWDFTNNQMPAKDITLYAQFSKdaasggddggtd  533
            LL+EP APTK+GYTF GWYDAK+GGT WDF+ ++MP+ DITLYA+F+K+++S+  + + +
Sbjct  373  LLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPG  432

Query  534  egggnsenstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
             ++ N  +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  433  KDDKNDKDKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  166 bits (615),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 151/469 (33%), Positives = 266/469 (57%), Gaps = 63/469 (13%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDNALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILSGNQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL                    
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN-------------------  101

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYDNQLENLS  175
               ML +S+N I++I++L+NL NL++L + D +I+D+TPLSGLT+L  + L  NQ+ +++
Sbjct  102  ---MLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  176  GVNNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSAN  235
             + NL +L  L++  N++++   L  +++L VL  + +QI     +    NL   D+  N
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQ-TNLVAPDILKN  217

Query  236  QIVDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTI  295
               +  P + ++N  T + S N   ++ +++S ++ D     ++KI+    L    K+T+
Sbjct  218  AYGEVVPPTTISNNGT-FASPNITWNLDSFTSEVSYD----FNQKIT----LGDNGKVTF  268

Query  296  IQMTNQLIVNEPISFESTITIPNLIKNIAEQTIDPDTISDNGVYANESVTWNLPTYIPKV  355
                 Q IV+ P+++ +T+ +        + T   + +  + + ++       P+   K 
Sbjct  269  AGTVVQPIVEAPVNYITTFDV--------DGTTTTENVVVDTLITE-------PAEPTKE  313

Query  356  SYTFI---ERDTVGN----ATGNFSGTVEQPLVQY----FKATFNIDGQETTENVETGTL  404
            +YTF    + +T GN    A ++ ++T      Q+    + ATF++DG+ T ++V+  +L
Sbjct  314  GYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQAL  373

Query  405  LQEPPTPVKEGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINS  453
            LQEP +P K+GYTF GWYDA TGGT WDF++  MP++DITLYA+F+ N+
Sbjct  374  LQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

82) lmo4a_0371 in NC_017529


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  316 bits (1184),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 188/416 (46%), Positives = 295/416 (71%), Gaps = 6/416 (1%)

Query  178  NNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSANQI  237
             +L+Q+  L+   + + +++ +Q L+NL +L  + NQI N+  ++ L NL  L L+ N+I
Sbjct  73   TDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKI  132

Query  238  VDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQ  297
             D TPL+GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT+++
Sbjct  133  SDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLH  192

Query  298  MTNQLIVNEPISFESTITIPNLIKNIAEQTIDPDTISDNGVYANESVTWNLPTYIPKVSY  357
            + +Q I   P+ +++ +  P+++KN   + + P TIS+NG +A+ ++TWNL ++ + VSY
Sbjct  193  LEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSY  252

Query  358  TFIERDTVG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVK  413
             F ++ T+G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P K
Sbjct  253  DFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTK  312

Query  414  EGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQTVDYQG  473
            EGYTF+GWYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q VDYQ+
Sbjct  313  EGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQA  372

Query  474  LLEEPPAPTKEGYTFKGWYDAKSGGTKWDFTNNQMPAKDITLYAQFSKdaasggddggtd  533
            LL+EP APTK+GYTF GWYDAK+GGT WDF+ ++MP+ DITLYA+F+K+++S+  + + +
Sbjct  373  LLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPG  432

Query  534  egggnsenstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
             ++ N  +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  433  KDDKNDKDKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  166 bits (615),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 151/469 (33%), Positives = 266/469 (57%), Gaps = 63/469 (13%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDNALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILSGNQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL                    
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN-------------------  101

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYDNQLENLS  175
               ML +S+N I++I++L+NL NL++L + D +I+D+TPLSGLT+L  + L  NQ+ +++
Sbjct  102  ---MLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVT  158

Query  176  GVNNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSAN  235
             + NL +L  L++  N++++   L  +++L VL  + +QI     +    NL   D+  N
Sbjct  159  PLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQ-TNLVAPDILKN  217

Query  236  QIVDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTI  295
               +  P + ++N  T + S N   ++ +++S ++ D     ++KI+    L    K+T+
Sbjct  218  AYGEVVPPTTISNNGT-FASPNITWNLDSFTSEVSYD----FNQKIT----LGDNGKVTF  268

Query  296  IQMTNQLIVNEPISFESTITIPNLIKNIAEQTIDPDTISDNGVYANESVTWNLPTYIPKV  355
                 Q IV+ P+++ +T+ +        + T   + +  + + ++       P+   K 
Sbjct  269  AGTVVQPIVEAPVNYITTFDV--------DGTTTTENVVVDTLITE-------PAEPTKE  313

Query  356  SYTFI---ERDTVGN----ATGNFSGTVEQPLVQY----FKATFNIDGQETTENVETGTL  404
            +YTF    + +T GN    A ++ ++T      Q+    + ATF++DG+ T ++V+  +L
Sbjct  314  GYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQAL  373

Query  405  LQEPPTPVKEGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINS  453
            LQEP +P K+GYTF GWYDA TGGT WDF++  MP++DITLYA+F+ N+
Sbjct  374  LQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNP  422

83) LIV_2372 in NC_016011


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  312 bits (1170),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 181/407 (45%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  24   KTSYVMTSKAASLTTPTPINQLFPDPNLAEVVREALGRWNVTDAVSQSELDSIDTLRASH  83
            ++S  M ++A S++ P+PIN++F DP LA+ V+  LG+ +VTD V+Q++L+ I  L A +
Sbjct  26   NASHGMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADD  85

Query  84   KSIKRIDGIQYLTNLKL----------------------LYFFDNQISDISKLAELTDLR  121
            K+I+ I+GIQYLTNL++                      LY+ DN+ISD++ L+ LT+L 
Sbjct  86   KGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLT  145

Query  122  YLSLKDNQVKDVSALSKLNRLNELILDNNQVIDISPLAGLKNLIVLDIRNQTYTNPAINY  181
            ++ L  NQ+KDV++L++L +LN L L +NQ+ D SPL  + +L VL++ +Q  T +++ Y
Sbjct  146  FVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVY  205

Query  182  QENIAIPITVRNETSTLLQYLKVSNNGKVANPNLMWNLSAYVPEVSYSFSEYLTVGG-AR  240
            Q N+  P  ++N  + ++    +SNNG  A+PN+ WNL ++ +EVSY F++ +T+G+ ++
Sbjct  206  QTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGK  265

Query  241  TFFTGKVVQPL--KPVSAKAYYDIDGVETEEKMQAGMLLTEPKTPTKEGYTFKGWYSAEA  298
              F+G VVQP+   PV+  + +D+DG  T E++  + L+TEP  PTKEGYTF GWY AE+
Sbjct  266  VTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAET  325

Query  299  FGKKWNFTTDYTPSYDFTLYAQFKVNSYTATLEVGGKTTTQKVEYQKYLQEPGMPSKKGY  358
             G+ W+F+ D  P+ + TLYAQF +NSYTAT++V+G TT QKV+YQ  LQEP  P+K GY
Sbjct  326  GGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGY  385

Query  359  SFEGWYDAKKGGKKWDFVMNKMPAKDITLYAQFKKKTESESNIQVNG  405
            +F GWYDAK GG  WDF  +KMP+ DITLYA+F K+  S+++    G
Sbjct  386  TFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPG  432

84) LMOATCC19117_0379 in NC_018584


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  312 bits (1168),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 198/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPSYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL S+ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.9 bits (82),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

85) LM220_05057 in NC_021830


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  312 bits (1168),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 198/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPSYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL S+ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.9 bits (82),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

86) LMOSLCC2540_0366 in NC_018586


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  312 bits (1168),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 198/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPSYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL S+ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.9 bits (82),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

87) MUO_01955 in NC_017728


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  311 bits (1166),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 197/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

88) Lm4b_00372 in NC_012488


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  311 bits (1166),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 197/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

89) LMOL312_0352 in NC_018642


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  311 bits (1166),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 197/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

90) LMOSLCC2755_0355 in NC_018587


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  311 bits (1166),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 197/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

91) LMOSLCC2482_0356 in NC_018591


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  311 bits (1166),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 197/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

92) M643_12085 in NC_021826


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  311 bits (1166),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 197/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

93) M641_12050 in NC_021838


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  311 bits (1166),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 197/469 (43%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.3, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

94) M637_04410 in NC_021824


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  311 bits (1164),  Expect = 9e-86, Method: Compositional matrix adjust.
 Identities = 197/469 (43%), Positives = 310/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPSYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL S+ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTAIFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTA FDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

95) LM1816_05613 in NC_021829


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  310 bits (1162),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 196/469 (42%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGISSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT +++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.9 bits (82),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

96) M640_00680 in NC_021839


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  310 bits (1162),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 196/469 (42%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGISSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT +++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.9 bits (82),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

97) M644_14260 in NC_021827


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  310 bits (1162),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 196/469 (42%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGISSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT +++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.9 bits (82),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

98) M645_01210 in NC_021840


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  310 bits (1162),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 196/469 (42%), Positives = 311/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGISSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT +++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDTISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P TIS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WDF+ D MPA ++TLYAQF+INSYTATFDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.9 bits (82),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

99) LMOf2365_0374 in NC_002973


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  309 bits (1157),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 194/469 (42%), Positives = 310/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDSISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P +IS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDYTADTMPANDITLYAQFSINSYTAIFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WD++ D MPA ++TLYAQF+INSYTA FDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

100) inlA_4 in NC_019556


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  309 bits (1157),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 194/469 (42%), Positives = 310/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDSISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P +IS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDYTADTMPANDITLYAQFSINSYTAIFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WD++ D MPA ++TLYAQF+INSYTA FDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

101) LMOSLCC2378_0371 in NC_018585


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  309 bits (1157),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 194/469 (42%), Positives = 310/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDSISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P +IS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDYTADTMPANDITLYAQFSINSYTAIFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WD++ D MPA ++TLYAQF+INSYTA FDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

102) M638_13605 in NC_021825


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  309 bits (1157),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 194/469 (42%), Positives = 310/469 (67%), Gaps = 28/469 (5%)

Query  125  NPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLR  184
             PI++I + + L +    ++  + VTD    ++L ++  L   ++ ++++ G++ L +L 
Sbjct  42   APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLN  101

Query  185  SLNVSNNKLTNLDELQALSNLSVLYANEnqinnlqglsnlnnlflldlsanQIVDTTPLA  244
             L VS+N++TN+  L  L+NL  LY  +N                      +I D TPL+
Sbjct  102  MLGVSSNQITNITPLANLTNLDSLYLGDN----------------------KISDVTPLS  139

Query  245  GLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIV  304
            GLT++  + +S NQI DVT L++L +L+ LD+ +N+IS+  PL ++T LT++++ +Q I 
Sbjct  140  GLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQIT  199

Query  305  NEPISFESTVTIPNLIKNIAEQTIDPDSISDNGVYANEAVTWNLPTYIPKVSYTFIERDT  364
              P+ +++ +  P+++KN   + + P +IS+NG +A+  +TWNL ++ + VSY F ++ T
Sbjct  200  AAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKIT  259

Query  365  IG-NATGNFSGTVEQPLVQ---YFKATFNIDGQETTENVETGTLLQEPPTPVKEGYTFNG  420
            +G N+   F+GTV QP+V+    + +TF++DG  TTENV  +TL+ EP+ P KEGYTF+G
Sbjct  260  LGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSG  319

Query  421  WYDAETGGTKWDYTADTMPANDITLYAQFSINSYTAIFDVDGVISTQAVEYQGLLEEPPA  480
            WYDAETGG  WD++ D MPA ++TLYAQF+INSYTA FDVDG  + Q V+YQ+LL+EP A
Sbjct  320  WYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTA  379

Query  481  PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDAssggdgggtdegggnse  540
            PTKDGYTF GWYDAKTGGT WDF+ ++MP++DITLYA+F+K++SS+    + + ++ N  
Sbjct  380  PTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDK  439

Query  541  nstegAPNTSDIDTINHIVLPATGDDHVLFPIFIGTFLTSLALLTLRRK  589
            +     +N S   T     LP T+DD  ++P ++GT++ + A+L LR+K
Sbjct  440  DKLTIKANDSADATSTK--LPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/200 (39%), Positives = 137/200 (69%), Gaps = 5/200 (2%)

Query  1    MKSKGRLFLYVVLALSIVIGTNVFIKIDa-----haaaappaaISQIFPDDALATEIQTT  55
            MK +    L V+L ++ ++G ++ ++          + A PA+I++IF D ALA E++T 
Sbjct  1    MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTE  60

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LGK+S ++ VTQTDL+ I  L    KGI+S+EG++YLTNL  L +++NQ+++I+PL  LT
Sbjct  61   LGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLT  120

Query  116  NLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLS  175
            NL  L L++N ISD+++LS L +L  ++++  Q+ D+TPL+ LT+L+ L+L +NQ+ + S
Sbjct  121  NLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDAS  180

Query  176  GVNSLHQLRSLNVSNNKLTN  195
             + ++ +L  L++ ++++T 
Sbjct  181  PLVNMTDLTVLHLEKQQITA  200


 Score = 26.6 bits (81),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 24/78 (31%), Positives = 45/78 (58%), Gaps = 0/78 (0%)

Query  56   LGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYltnlgtliltgnQVSDISPLKGLT  115
            LG +  ++V   ++L  +  + L+ + I  +  +  LT+L  L L  NQ+SD SPL  +T
Sbjct  127  LGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMT  186

Query  116  NLTMLQLSGNPISDISAL  133
            +LT+L+L  + I+  + +
Sbjct  187  DLTVLHLEKQQITAAPVV  204

103) lwe1429 in NC_008555


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  289 bits (1081),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 186/462 (41%), Positives = 313/462 (68%), Gaps = 12/462 (2%)

Query  129  NLGENLQLKDITALSGLTTLTNFTVGSLELSDISALSNLANLTDLWIASPKLSNISALSN  188
            ++++   +++I + ++L+   +  +G   ++D  + ++L ++T L      +++I ++  
Sbjct  37   SIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQY  96

Query  189  LTNLESLTVRISPISDFSPVANLINLRNLVLDQDGLKDSDLIYLNNLTKLTELSLIDNNI  248
            LTNL+ L V  + I++++P+ANL NL +L L+++  K SD+  L+ LT+LT + L  N+I
Sbjct  97   LTNLNMLGVSSNQITNITPLANLTNLDSLYLGDN--KISDVTPLSGLTQLTFVQLSINQI  154

Query  249  SDIRslvnltsltslslddnQIKDISSLSGLANNLSYLNISGQNINNPIIPFQTDLSIPN  308
             D+ +L NLT L  L L +NQI D S+L  +++ L+ L++  Q+I  + + +QT+L  P+
Sbjct  155  KDVTPLANLTKLNYLDLRENQISDASPLVNMTD-LTVLHLEKQQITAAPVVYQTNLVAPD  213

Query  309  NVIGIDGTLLDPLPDYISDEGKYNSPNITWNLPTYVPEVNYVYYQTIPISQGETAIFQGI  368
             +    G ++ P    IS++G + SPNITWNL ++ +EV+Y + Q I +++     F G 
Sbjct  214  ILKNAYGEVVPPTT--ISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFAGT  271

Query  369  VYQPLQEEAVSYKVVFNIEGKETNEMVEVDSFLEEPATPTKEGYTFTGWYDAKIGGNKWD  428
            V QP+ E +V+Y   F+++G  T E V VD+++ EPA PTKEGYTF+GWYDA  GGN WD
Sbjct  272  VVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNEWD  331

Query  429  FASDTMPANDITLYAQFSINNYTATFNIDGKETTESVAYQNLVTEPTAPVKEGYTFTGWY  488
            FA D MPA ++TLYAQF+IN+YTATF++DG  T + V YQ L+ EPTAP K+GYTF GWY
Sbjct  332  FAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWY  391

Query  489  DAKTGGNKWDFASDIMPANNITLYARFAKNTSPKNDKGTPAKGNNGSNTNMKLTASPNPI  548
            DAKTGG  WDFA+  MP+++ITLYARF+KN S+ N + +P+K+++  + ++ + A+    
Sbjct  392  DAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKAN----  447

Query  549  EGKTSKPSNKQLPSTGDENNFLPIFLGVLCISLASVLVFWRK  590
               ++ +++ +LP T+D+++ +P +LG L I+ +++L++++K
Sbjct  448  --DSADATSTKLPKTSDDSSMIPTILGTLFIG-GAILILRKK  486


 Score =  131 bits (482),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 89/235 (38%), Positives = 154/235 (66%), Gaps = 26/235 (11%)

Query  1    MKTKCILLLRITQNLLALMLIAAVSMWIIIGNETEVQADTITQPTAINELFPDSDLAEVM  60
            MK +   +L++   LL +  I ++S+W+  ++    QA++I+QP++INE+F D+ LA+ +
Sbjct  1    MKQRKTSVLHV---LLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEV  57

Query  61   RVELGKTSVNDIISQNELDTLTILNGGNKNIKSIEGIQYLNNLVKIDLNENDISNINNLA  120
            + ELGKTSV D ++Q +L+ +T L++++K I+SIEGIQYL NL  ++++ N+I+NI  LA
Sbjct  58   KTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLA  117

Query  121  GLTNLKNLNLGENLQLKDITALSGLTTLTNFTVGSLELSDISALSNLANLTDLWIASPKL  180
             LTNL +L LG+N ++ D+T+LSGLT LT F    L +++I                   
Sbjct  118  NLTNLDSLYLGDN-KISDVTPLSGLTQLT-FV--QLSINQI-------------------  154

Query  181  SNISALSNLTNLESLTVRISPISDFSPVANLINLRNLVLDQDGLKDSDLIYLNNL  235
             ++++L+NLT+L+ L +R + ISD SP+ N+ +L  L L+++ +  + ++Y  NL
Sbjct  155  KDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNL  209

104) lse_0367 in NC_013891


> AJ007319|2|G2|3980134|CAA07456.1|Listeria_monocytogenes_EGD|+|435..1907|inlG|-|internalin 
G
Length=490

 Score =  280 bits (1048),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 284/407 (70%), Gaps = 10/407 (2%)

Query  55   SVDTIVTQQILADISTFSMQSHEVSNLEGLEYLTGANSIDLY-GGKNITDLSPLSGLNNL  113
            ++++I   Q L++++ +++ S++++N+  L  LT  +S  LY G+++I+D++PLSGL +L
Sbjct  87   GINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDS--LYLGDNKISDVTPLSGLTQL  144

Query  114  TNLDIAFNNVTDLSPIANLNNLYSFSATGNSINDISPLANMTTLRYLSLNSQTITNPELN  173
            T +++++N++ D++P+ANL +L  +    N I+D SPL NMT L  L L+ Q IT + + 
Sbjct  145  TFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVV  204

Query  174  YTslisipnniinlnGTIIAPSTISDNGVYEEPNVEWDLPAYLPAVSYKFSKYVSVA-NA  232
            Y + +  P+ + N  G +++P+TIS+NG +  PN+ W+L ++ + VSY F++ ++++ N+
Sbjct  205  YQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNG  264

Query  233  EATFSGTVNQPLKEV-LDYTVDFDVDGVVSDTESITEGNLITAPAEPTKTGYTFLGWYDA  291
              TF+GTV QP+ E  ++Y   FDVDG  + TE++  + LIT PAEPTK GYTF GWYDA
Sbjct  265  KVTFAGTVVQPIVEAPVNYITTFDVDGTTT-TENVVVDTLITEPAEPTKEGYTFSGWYDA  323

Query  292  AEGGNKWDFSSDKMPASDITLYAQFSLNSYDVNFDVDGTTSSETVDYNELIQEPQNPIKP  351
              GGN WDF+ DKMPA+++TLYAQF++NSY   FDVDG T+++ VDY+ L+QEP  P K 
Sbjct  324  ETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKD  383

Query  352  GYTFTGWYDAKEGGNKWNFETDKMPANDVTLYARFSLISDTPNNNQGGATPKGPKQKHTL  411
            GYTF GWYDAK GG  W+F T KMP++D+TLYARF+  + +++N+Q ++   + ++K+ L
Sbjct  384  GYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFT-KNPSSDNSQTAPGKDDKNDKDKL  442

Query  412  TIktesstktkeVARKTLPVTGDANSLPLLITGMVLLSSVLFICRKR  458
            TI    +  + + +   LP T+D +S+   I G +++++ ++I RK+
Sbjct  443  TI---KANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRKK  486


 Score = 44.0 bits (147),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 43/147 (30%), Positives = 81/147 (56%), Gaps = 24/147 (16%)

Query  24   AGNASASLPAKISEVFPdddlanaiann-lnVSVDTIVTQQILADISTFSMQSHEVSNLE  82
            A   S + PA I+E+F D  LA+ +  +  + SV   VTQ  L +I+ +  +   ++++E
Sbjct  33   AQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIE  92

Query  83   GLEYLTGANSIDLYGGKNITDLSPLSGLNNLTNLDIAFNNVTDLSPIANLNNLYSFSATG  142
            G++YLT                       NL  L+++ N++T+++P+ANL NL S+   +
Sbjct  93   GIQYLT-----------------------NLNMLGVSSNQITNITPLANLTNLDSLYLGD  129

Query  143  NSINDISPLANMTTLRYLSLNSQTITN  169
            N I+D++PL+ +T L ++ L+ + I +
Sbjct  130  NKISDVTPLSGLTQLTFVQLSINQIKD  156