Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of unnamed gene of AF447814

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECO26_p1-29
( - )

NC_013369
(Escherichia coli 11368)

e-277

96.2

2) EC042_pAA025
( - )

NC_017627
(Escherichia coli 042)

e-231

94.2

• Sequence Alignments

1) ECO26_p1-29 in NC_013369


>AF447814|2|G2|18265861|AAL67334.1|Escherichia_coli_CFT073|+|354..1028|-|-|L0015-like 
          Length = 675

 Score = 951 bits (2454), Expect = e-277
 Identities = 505/527 (96%)
 Strand = Plus / Plus

Query: 13  gaaagccagttccgtcagaaagaccagcaactaagtctggttgaagagacggaggccttc 72
           ||||||||| |||||||||||||||||||||| |||||||||||||||||| || |||||
Sbjct: 64  gaaagccagctccgtcagaaagaccagcaactgagtctggttgaagagacgaagaccttc 123

Query: 73  ctgtgctctgcactggcacgtgccgaagaaaagatcgaagaagatgaacgggaaatagaa 132
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctgcgctctgcactggcacgtgccgaagaaaagatcgaagaagatgaacgggaaatagaa 183

Query: 133 catctgcagactcagatagaaaaactgcgccggatgctgttcggtacccgttctgaaaaa 192
           ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 184 catctgcgggctcagatagaaaaactgcgccggatgctgttcggtacctgttctgaaaaa 243

Query: 193 ctgcgtcgtgaagttgaacaggctgaggccctgctgaaacaacgcgaacaggacagcgat 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctgcgtcgtgaagttgaacaggctgaggccctgctgaaacaacgcgaacaggacagcgat 303

Query: 253 cgttacagtgggcgggaagacgctccacaggttccccgccagttgagacagccgcgccat 312
           |||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||
Sbjct: 304 cgttacagtgggcgggaagacgatccacaggttccccgccagttgcggcagtcgcgccat 363

Query: 313 cgtcgtccgttaccggcacaccttccccatgcaatacaccgtctggagtctgaagaaagc 372
           ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 364 cgtcgtccgttcccggcacaccttccccgtgaaatacaccgtctggagtctgaagaaagc 423

Query: 373 tgttgcccggagtgtggcggtgagctggattatctggaggaagtcagtgcagaacaactg 432
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 424 tgttgcccggagtgtggcggtgagctggattatctgggggaagtcagtgcagaacaactg 483

Query: 433 gaactggtgagcagcgccctgaaagtgatccgcactgttcgggt-aaaaaagcctgtaca 491
           ||||||||||||||||| ||||||||||||||||| |  ||||| |||||||||||||||
Sbjct: 484 gaactggtgagcagcgctctgaaagtgatccgcacagaacgggtaaaaaaagcctgtaca 543

Query: 492 aaatgtgactgcatcgttgaagcaccggcgccgtcccgcc-cgatag 537
           |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 544 aaatgtgactgcatcgttgaagcaccggcgccgtcccgccgcgatag 590

2) EC042_pAA025 in NC_017627


>AF447814|2|G2|18265861|AAL67334.1|Escherichia_coli_CFT073|+|354..1028|-|-|L0015-like 
          Length = 675

 Score = 798 bits (2059), Expect = e-231
 Identities = 417/443 (94%)
 Strand = Plus / Plus

Query: 67  ctccgtcagaaagaccaacaactgagtctggttgaagagacggaggccttcctgcgttct 126
           ||||||||||||||||| |||||||||||||||||||||||| || |||||||||| |||
Sbjct: 73  ctccgtcagaaagaccagcaactgagtctggttgaagagacgaagaccttcctgcgctct 132

Query: 127 gtgctggcacgtgccgaagaaaagatcgaagaagatgaacgggaaatagaacatctgcgg 186
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gcactggcacgtgccgaagaaaagatcgaagaagatgaacgggaaatagaacatctgcgg 192

Query: 187 gctcagatagaaaaactgcgccggatgctgttcggtacccgttctgaaaaactgcgtcgt 246
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 193 gctcagatagaaaaactgcgccggatgctgttcggtacctgttctgaaaaactgcgtcgt 252

Query: 247 gaagttgaacaggctgaggccctgctgaagcaacgcgaacaggacagcgatcgttacagt 306
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 253 gaagttgaacaggctgaggccctgctgaaacaacgcgaacaggacagcgatcgttacagt 312

Query: 307 gggcgagaggatgacccgcaggttccccgccagttgcgacagtcacgccatcgtcgtccg 366
           ||||| || || || || |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 313 gggcgggaagacgatccacaggttccccgccagttgcggcagtcgcgccatcgtcgtccg 372

Query: 367 ttaccggagcatctgccccgcgaaataaaccgcctggagcctgaagaaagctgttgcccg 426
           || ||||  || || ||||| |||||| |||| |||||| ||||||||||||||||||||
Sbjct: 373 ttcccggcacaccttccccgtgaaatacaccgtctggagtctgaagaaagctgttgcccg 432

Query: 427 gagtgtggcggtgagctggattatctgggggaagtcagtgcagaacaactggaactggtg 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gagtgtggcggtgagctggattatctgggggaagtcagtgcagaacaactggaactggtg 492

Query: 487 agcagcgccctaaaagtgatccg 509
           |||||||| || |||||||||||
Sbjct: 493 agcagcgctctgaaagtgatccg 515


 Score = 75 bits (193), Expect = 1e-13
 Identities = 39/41 (95%)
 Strand = Plus / Plus

Query: 1  atgagtcagaaatacctcattcgcatcgcagagctggaaag 41
          |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 28 atgagtcagaaatacctcattcgcattgcagaactggaaag 68