> AF306797|2|G2|11139683|AAG31795.1|Vibrio_cholerae_SCE256|+|1409..2242|tcpN|-|toxin
co-regulated pilus virulence regulatory
protein
Length=277
Score = 355 bits (1332), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 220/273 (81%), Positives = 251/273 (92%), Gaps = 0/273 (0%)
Query 3 GKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEinsssiillk 62
+ SF NVY + KFDTY FN+++I+DYK+FWI+ G AKL+DKNCLVSY I +SS++LLK
Sbjct 4 NNTSFLVNVYDLKKFDTYAFNKVFIDDYKIFWINKGSAKLVDKNCLVSYTITASSVVLLK 63
Query 63 knsiQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCEHN 122
KNSIQRFSL SLSDE+I+V V+TI + F+ SL+ Y+ GDLMIRNLY+E+KDLLLWNCE N
Sbjct 64 KNSIQRFSLMSLSDESISVCVLTIKNKFVNSLRHYLQGDLMIRNLYNEKKDLLLWNCELN 123
Query 123 DIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDI 182
DI+VL+E+V+ + + +YS++FLK+FFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDI
Sbjct 124 DISVLGEIVSTYDQTQYSEDFLKIFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDI 183
Query 183 TRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQ 242
TRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQ
Sbjct 184 TRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQ 243
Query 243 SGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAE 275
SGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAE
Sbjct 244 SGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAE 276
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