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Homologs of hrpV gene of AF069652

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpV
( YP_273540.1 )

type III negative regulator of hrp expression HrpV

NC_005773
(Pseudomonas syringae 1448A)

4e-47

2) Psyr_1202
( YP_234294.1 )

negative regulator of hrp expression HrpV

NC_007005
(Pseudomonas syringae B728a)

1e-43

3) hrpV
( NP_791218.1 )

negative regulator of hrp expression HrpV

NC_004578
(Pseudomonas syringae DC3000)

1e-40

4) Pmen_0021
( YP_001185528.1 )

hypothetical protein

NC_009439
(Pseudomonas mendocina ymp)

1e-30

5) hrpV
( YP_005210963.1 )

protein HrpV

NC_016830
(Pseudomonas fluorescens F113)

2e-18

• Sequence Alignments

1) hrpV in NC_005773


> AF069652|2|G2|3603322|AAC35807.1|Pseudomonas_syringae_Race_4|+|303..650|hrpV|-|negative 
regulator of hrp expression
Length=115

 Score =  180 bits (668),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 112/115 (98%), Positives = 113/115 (99%), Gaps = 0/115 (0%)

Query  1    MIEVKEKAAFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQ  60
            MIEVKEKAAFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQ
Sbjct  1    MIEVKEKAAFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQ  60

Query  61   MRFSEAERFRNYFLFLDVQRDFVVWHAVSDAPDAVTNLDDIRRHELMLAGLEHLA  115
            MRFSEAERFRN F FLDVQRDFVVWHAVSDAPDAVTNLDDIRRHELMLAG+EHLA
Sbjct  61   MRFSEAERFRNNFCFLDVQRDFVVWHAVSDAPDAVTNLDDIRRHELMLAGVEHLA  115

2) Psyr_1202 in NC_007005


> AF069652|2|G2|3603322|AAC35807.1|Pseudomonas_syringae_Race_4|+|303..650|hrpV|-|negative 
regulator of hrp expression
Length=115

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 101/115 (88%), Positives = 111/115 (97%), Gaps = 0/115 (0%)

Query  1    MIEVEEKTAFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQ  60
            MIEV EK+AFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQ
Sbjct  1    MIEVKEKAAFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQ  60

Query  61   LRFSEAERFNDYFLFLDMRRDFVVWHAVSDAPHAVTNLDDIRRNELILAGLDHLA  115
            +RFSEAERF + F FLD++RDFVVWHAVSDAP+AVTNLDDIRR+EL+LAG++HLA
Sbjct  61   MRFSEAERFRNNFCFLDVQRDFVVWHAVSDAPDAVTNLDDIRRHELMLAGVEHLA  115

3) hrpV in NC_004578


> AF069652|2|G2|3603322|AAC35807.1|Pseudomonas_syringae_Race_4|+|303..650|hrpV|-|negative 
regulator of hrp expression
Length=115

 Score =  158 bits (585),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 89/115 (78%), Positives = 106/115 (93%), Gaps = 0/115 (0%)

Query  1    MIEVTEKSAFYAQVAAQSPAVWPVANGVAFVSRREHHDWGIALHIEGRALRPDQLRDALQ  60
            MIEV EK+AFY +VAAQSPAVWPVANGV+FVSRREHHDWGIALHIEGRALRP+QLR+ALQ
Sbjct  1    MIEVKEKAAFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQ  60

Query  61   RRFMESERFNHYFLFLDVRRDFVVWHAVNEKPGSYASLDDIRRHELMLAGLDHLS  115
             RF E+ERF + F FLDV+RDFVVWHAV++ P++ ++LDDIRRHELMLAG++HL+
Sbjct  61   MRFSEAERFRNNFCFLDVQRDFVVWHAVSDAPDAVTNLDDIRRHELMLAGVEHLA  115

4) Pmen_0021 in NC_009439


> AF069652|2|G2|3603322|AAC35807.1|Pseudomonas_syringae_Race_4|+|303..650|hrpV|-|negative 
regulator of hrp expression
Length=115

 Score =  125 bits (458),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 68/114 (60%), Positives = 93/114 (82%), Gaps = 0/114 (0%)

Query  1    MKQVSQKLAFYEHVAAERSAVWPVASGVTFVSRREHQDWGIALHVESLAMSPEQLRNALE  60
            M +V +K AFY +VAA+ +AVWPVA+GV+FVSRREH+DWGIALH+E+ A+ PEQLR+AL+
Sbjct  1    MIEVKEKAAFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQ  60

Query  61   RRFVESDRYSDYFLFLNVQQDFVVWHASPDVEGVGDSLDDICREQLQLAGLGHL  114
             RF E++R+ + F FL+VQ+DFVVWHA +D  +   +LDDI R++L LAG+ HL
Sbjct  61   MRFSEAERFRNNFCFLDVQRDFVVWHAVSDAPDAVTNLDDIRRHELMLAGVEHL  114

5) hrpV in NC_016830


> AF069652|2|G2|3603322|AAC35807.1|Pseudomonas_syringae_Race_4|+|303..650|hrpV|-|negative 
regulator of hrp expression
Length=115

 Score = 84.9 bits (303),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 46/112 (42%), Positives = 79/112 (71%), Gaps = 0/112 (0%)

Query  8    VSTRQAFQKNIIAGIATYWEIAPGIEFCLRREPHSVGLALQIQSQALRANQIQHALERRF  67
            V  + AF  N+ A  ++ W +A G+ F  RRE H  G+AL+I+++ALR++Q+++AL+ RF
Sbjct  4    VKEKAAFYYNVAAQSPAVWPVANGVSFVSRREHHDWGIALHIEGRALRPEQLREALQMRF  63

Query  68   AQPTDYAQLFVFLDPQRALVVWQALPDAPLSTELLDEIQSRQLSLLGLEDLD  119
            +++  + + F FLD QR +VVW+A++DAP +   LD+I+ ++L L G+E+L 
Sbjct  64   SEAERFRNNFCFLDVQRDFVVWHAVSDAPDAVTNLDDIRRHELMLAGVEHLA  115