Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III transcriptional regulator HrpS |
NC_007005 (Pseudomonas syringae B728a) |
2e-127 |
88 |
|
type III transcriptional regulator HrpS |
NC_005773 (Pseudomonas syringae 1448A) |
4e-125 |
100 |
|
type III transcriptional regulator HrpS |
NC_004578 (Pseudomonas syringae DC3000) |
1e-121 |
89 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
3e-94 |
67 |
|
type III transcriptional regulator HrpR |
NC_005773 (Pseudomonas syringae 1448A) |
8e-83 |
65 |
|
type III transcriptional regulator HrpR |
NC_004578 (Pseudomonas syringae DC3000) |
8e-83 |
65 |
|
type III transcriptional regulator HrpR |
NC_007005 (Pseudomonas syringae B728a) |
6e-81 |
64 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_012912 (Dickeya zeae Ech1591) |
2e-78 |
55 |
|
HrpS type III protein secretion system regulatory protein |
NC_014500 (Dickeya dadantii 3937) |
2e-77 |
54 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
3e-77 |
59 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_013592 (Dickeya dadantii Ech586) |
3e-77 |
55 |
|
Fis family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
3e-76 |
57 |
|
protein HrpS |
NC_016830 (Pseudomonas fluorescens F113) |
2e-75 |
56 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_022268 (Serratia sp. ATCC 39006) |
4e-75 |
55 |
|
type III secretion system transcriptional regulator RspS |
NC_017911 (Pseudomonas fluorescens A506) |
8e-75 |
59 |
|
sigma-54-dependent enhancer-binding protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
3e-73 |
54 |
|
HrpS |
NC_018525 (Pectobacterium carotovorum PCC21) |
5e-73 |
52 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_012917 (Pectobacterium carotovorum PC1) |
7e-72 |
53 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein |
NC_017445 (Erwinia sp. Ejp617) |
7e-71 |
55 |
|
Sigma-54-dependent enhancer-binding protein HrpS |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
8e-71 |
55 |
|
Hrp/hrc secretion/translocation pathway protein HrpS |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
8e-71 |
55 |
|
Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster) |
NC_010694 (Erwinia tasmaniensis Et1/99) |
2e-70 |
55 |
|
putative type III secretion system, regulatory protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
2e-69 |
57 |
|
sigma-54-dependent enhancer-binding protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
8e-69 |
54 |
|
sigma-54-dependent enhancer-binding protein HrpS |
NC_013961 (Erwinia amylovora CFBP1430) |
8e-69 |
54 |
|
sigma-54 interacting regulator |
NC_020064 (Serratia marcescens FGI94) |
4e-68 |
55 |
|
type III secretion system transcriptional regulator RspS |
NC_020209 (Pseudomonas poae RE*1-1-14) |
1e-58 |
58 |
|
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
NC_018867 (Dehalobacter sp. CF) |
3e-44 |
41 |
|
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
NC_018866 (Dehalobacter sp. DCA) |
3e-44 |
41 |
|
acetoacetate metabolism regulatory protein atoc |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
2e-42 |
41 |
|
formate hydrogenlyase transcriptional activator FhlA |
NC_016822 (Shigella sonnei 53G) |
2e-42 |
41 |
|
Fis family transcriptional regulator |
NC_013960 (Nitrosococcus halophilus Nc 4) |
3e-40 |
44 |
|
Fis family sigma-54 specific transcriptional activator PspF |
NC_015968 (Enterobacter asburiae LF7a) |
3e-37 |
41 |
|
hypothetical protein |
NC_021658 (Sorangium cellulosum So0157-2) |
3e-36 |
42 |
|
sigma-54 specific transcriptional regulator |
NC_010814 (Geobacter lovleyi SZ) |
4e-36 |
42 |
|
Fis family transcriptional regulator |
NC_021491 (Pseudomonas putida H8234) |
5e-36 |
42 |
|
sigma54 specific transcriptional regulator, Fis family ZraR - like protein |
NC_019902 (Thioalkalivibrio nitratireducens DSM 14787) |
7e-36 |
41 |
|
hypothetical protein |
NC_021505 (Pseudomonas putida NBRC 14164) |
7e-36 |
42 |
|
putative sigma-54 specific transcriptional regulator |
NC_010322 (Pseudomonas putida GB-1) |
8e-36 |
43 |
|
phage shock protein operon transcriptional activator |
NC_021066 (Raoultella ornithinolytica B6) |
9e-36 |
41 |
|
Sigma54 -dependent activator protein |
NC_021149 (Azotobacter vinelandii CA) |
1e-35 |
43 |
|
Sigma54 -dependent activator protein |
NC_021150 (Azotobacter vinelandii CA6) |
1e-35 |
43 |
|
Sigma54 -dependent activator protein |
NC_012560 (Azotobacter vinelandii DJ) |
1e-35 |
43 |
|
sigma-54 dependent transcriptional regulator |
NC_015733 (Pseudomonas putida S16) |
1e-35 |
43 |
|
sigma-54 dependent transcriptional regulator |
NC_019905 (Pseudomonas putida PC9) |
1e-35 |
42 |
|
putative transcriptional regulator |
NC_020912 (Pseudomonas aeruginosa B136-33) |
2e-35 |
43 |
|
Sigma-54 dependent transcriptional regulator |
NC_017530 (Pseudomonas putida BIRD-1) |
3e-35 |
42 |
|
Fis family transcriptional regulator |
NC_002947 (Pseudomonas putida KT2440) |
3e-35 |
42 |
|
sigma-54 dependent transcriptional regulator |
NC_018220 (Pseudomonas putida DOT-T1E) |
4e-35 |
42 |
|
putative sigma-54 specific transcriptional regulator |
NC_010501 (Pseudomonas putida W619) |
4e-35 |
41 |
|
sigma-54 dependent trancsriptional regulator |
NC_008048 (Sphingopyxis alaskensis RB2256) |
1e-34 |
41 |
|
putative transcriptional regulator |
NC_011770 (Pseudomonas aeruginosa LESB58) |
7e-35 |
43 |
|
transcriptional regulator |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
7e-35 |
43 |
|
transcriptional regulator |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
7e-35 |
43 |
|
Fis family transcriptional regulator |
NC_021577 (Pseudomonas aeruginosa RP73) |
8e-35 |
43 |
|
transcriptional regulator |
NC_002516 (Pseudomonas aeruginosa PAO1) |
8e-35 |
42 |
|
putative transcriptional regulator |
NC_017548 (Pseudomonas aeruginosa M18) |
9e-35 |
43 |
|
transcriptional regulator |
NC_018080 (Pseudomonas aeruginosa DK2) |
9e-35 |
42 |
|
sigma-54 factor interaction domain-containing protein |
NC_015410 (Pseudomonas mendocina NK-01) |
1e-34 |
42 |
|
sigma-54 factor interaction domain-containing protein |
NC_009512 (Pseudomonas putida F1) |
2e-34 |
43 |
|
sigma-54 factor interaction domain-containing protein |
NC_017986 (Pseudomonas putida ND6) |
2e-34 |
43 |
|
hypothetical protein |
NC_021499 (Pseudomonas resinovorans NBRC 106553) |
5e-33 |
44 |
|
response regulator receiver domain-containing protein |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
6e-32 |
42 |
|
Psp operon transcriptional activator PspF |
NC_016745 (Oceanimonas sp. GK1) |
2e-31 |
41 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_014315 (Nitrosococcus watsonii C-113) |
3e-31 |
41 |
|
putative sigma-54 dependent regulatory protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
1e-30 |
41 |
|
sigma-54-binding protein |
NC_017911 (Pseudomonas fluorescens A506) |
4e-30 |
41 |
|
putative transcriptional regulator |
NC_020829 (Pseudomonas denitrificans ATCC 13867) |
5e-30 |
43 |
|
Fis family transcriptional regulator |
NC_015174 (Planctomyces brasiliensis DSM 5305) |
2e-29 |
41 |
|
Psp operon transcriptional activator |
NC_020418 (Morganella morganii KT) |
3e-28 |
41 |
|
Fis family transcriptional regulator |
NC_011145 (Anaeromyxobacter sp. K) |
1e-26 |
43 |
|
sigma-54 dependent trancsriptional regulator |
NC_009675 (Anaeromyxobacter sp. Fw109-5) |
1e-25 |
44 |
|
sigma-54 factor interaction domain-containing protein |
NC_009439 (Pseudomonas mendocina ymp) |
5e-26 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF069650' AND ph.id_pai_orf='2' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc