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Homologs of hrpS gene of AF069650

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HrpS
( YP_234283.1 )

type III transcriptional regulator HrpS

NC_007005
(Pseudomonas syringae B728a)

2e-127

2) hrpS
( YP_273530.1 )

type III transcriptional regulator HrpS

NC_005773
(Pseudomonas syringae 1448A)

4e-125

100

3) hrpS
( NP_791207.1 )

type III transcriptional regulator HrpS

NC_004578
(Pseudomonas syringae DC3000)

1e-121

4) Pmen_0032
( YP_001185539.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

3e-94

5) hrpR
( YP_273529.1 )

type III transcriptional regulator HrpR

NC_005773
(Pseudomonas syringae 1448A)

8e-83

6) hrpR
( NP_791206.1 )

type III transcriptional regulator HrpR

NC_004578
(Pseudomonas syringae DC3000)

8e-83

7) HrpR
( YP_234282.1 )

type III transcriptional regulator HrpR

NC_007005
(Pseudomonas syringae B728a)

6e-81

8) Dd1591_1896
( YP_003004225.1 )

sigma54 specific transcriptional regulator, Fis family

NC_012912
(Dickeya zeae Ech1591)

2e-78

9) hrpS
( YP_003883235.1 )

HrpS type III protein secretion system regulatory protein

NC_014500
(Dickeya dadantii 3937)

2e-77

10) Pmen_0033
( YP_001185540.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

3e-77

11) Dd586_1893
( YP_003333457.1 )

sigma54 specific transcriptional regulator, Fis family

NC_013592
(Dickeya dadantii Ech586)

3e-77

12) PSEBR_a5366
( YP_004356874.1 )

Fis family transcriptional regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

3e-76

13) hrpS
( YP_005210952.1 )

protein HrpS

NC_016830
(Pseudomonas fluorescens F113)

2e-75

14) Ser39006_2908
( YP_008523290.1 )

sigma54 specific transcriptional regulator, Fis family

NC_022268
(Serratia sp. ATCC 39006)

4e-75

15) rspS
( YP_006322245.1 )

type III secretion system transcriptional regulator RspS

NC_017911
(Pseudomonas fluorescens A506)

8e-75

16) hrpS
( YP_050185.1 )

sigma-54-dependent enhancer-binding protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

3e-73

17) PCC21_022790
( YP_006646935.1 )

HrpS

NC_018525
(Pectobacterium carotovorum PCC21)

5e-73

18) PC1_2201
( YP_003017776.1 )

Fis family sigma-54 specific transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

7e-72

19) hrpS
( YP_005818266.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein

NC_017445
(Erwinia sp. Ejp617)

7e-71

20) hrpS
( YP_005804080.1 )

Sigma-54-dependent enhancer-binding protein HrpS

NC_017390
(Erwinia pyrifoliae DSM 12163)

8e-71

21) hrpS
( YP_002650063.1 )

Hrp/hrc secretion/translocation pathway protein HrpS

NC_012214
(Erwinia pyrifoliae Ep1/96)

8e-71

22) hrpS
( YP_001906474.1 )

Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-70

23) rspR
( YP_002870393.1 )

putative type III secretion system, regulatory protein

NC_012660
(Pseudomonas fluorescens SBW25)

2e-69

24) hrpS
( YP_003539957.1 )

sigma-54-dependent enhancer-binding protein

NC_013971
(Erwinia amylovora ATCC 49946)

8e-69

25) hrpS
( YP_003529897.1 )

sigma-54-dependent enhancer-binding protein HrpS

NC_013961
(Erwinia amylovora CFBP1430)

8e-69

26) D781_3924
( YP_007346299.1 )

sigma-54 interacting regulator

NC_020064
(Serratia marcescens FGI94)

4e-68

27) H045_00470
( YP_007395666.1 )

type III secretion system transcriptional regulator RspS

NC_020209
(Pseudomonas poae RE*1-1-14)

1e-58

28) DCF50_p1771
( YP_006913758.1 )

Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains

NC_018867
(Dehalobacter sp. CF)

3e-44

29) DHBDCA_p1762
( YP_006910773.1 )

Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains

NC_018866
(Dehalobacter sp. DCA)

3e-44

30) atoC
( YP_003039858.1 )

acetoacetate metabolism regulatory protein atoc

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-42

31) SSON53_16880
( YP_005457882.1 )

formate hydrogenlyase transcriptional activator FhlA

NC_016822
(Shigella sonnei 53G)

2e-42

32) Nhal_2343
( YP_003527818.1 )

Fis family transcriptional regulator

NC_013960
(Nitrosococcus halophilus Nc 4)

3e-40

33) Entas_2343
( YP_004828859.1 )

Fis family sigma-54 specific transcriptional activator PspF

NC_015968
(Enterobacter asburiae LF7a)

3e-37

34) SCE1572_16595
( YP_008149739.1 )

hypothetical protein

NC_021658
(Sorangium cellulosum So0157-2)

3e-36

35) Glov_0737
( YP_001950983.1 )

sigma-54 specific transcriptional regulator

NC_010814
(Geobacter lovleyi SZ)

4e-36

36) L483_30985
( YP_008097932.1 )

Fis family transcriptional regulator

NC_021491
(Pseudomonas putida H8234)

5e-36

37) zraR [H]
( YP_007217885.1 )

sigma54 specific transcriptional regulator, Fis family ZraR - like protein

NC_019902
(Thioalkalivibrio nitratireducens DSM 14787)

7e-36

38) PP4_52350
( YP_008116272.1 )

hypothetical protein

NC_021505
(Pseudomonas putida NBRC 14164)

7e-36

39) PputGB1_5223
( YP_001671441.1 )

putative sigma-54 specific transcriptional regulator

NC_010322
(Pseudomonas putida GB-1)

8e-36

40) pspF
( YP_007873864.1 )

phage shock protein operon transcriptional activator

NC_021066
(Raoultella ornithinolytica B6)

9e-36

41) AvCA_31690
( YP_007894117.1 )

Sigma54 -dependent activator protein

NC_021149
(Azotobacter vinelandii CA)

1e-35

42) AvCA6_31690
( YP_007899166.1 )

Sigma54 -dependent activator protein

NC_021150
(Azotobacter vinelandii CA6)

1e-35

43) Avin_31690
( YP_002800307.1 )

Sigma54 -dependent activator protein

NC_012560
(Azotobacter vinelandii DJ)

1e-35

44) PPS_5018
( YP_004704425.1 )

sigma-54 dependent transcriptional regulator

NC_015733
(Pseudomonas putida S16)

1e-35

45) B479_25340
( YP_007231900.1 )

sigma-54 dependent transcriptional regulator

NC_019905
(Pseudomonas putida PC9)

1e-35

46) G655_05020
( YP_007707853.1 )

putative transcriptional regulator

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-35

47) PPUBIRD1_4959
( YP_005932714.1 )

Sigma-54 dependent transcriptional regulator

NC_017530
(Pseudomonas putida BIRD-1)

3e-35

48) PP_5166
( NP_747267.1 )

Fis family transcriptional regulator

NC_002947
(Pseudomonas putida KT2440)

3e-35

49) flbD
( YP_006535085.1 )

sigma-54 dependent transcriptional regulator

NC_018220
(Pseudomonas putida DOT-T1E)

4e-35

50) PputW619_0299
( YP_001747174.1 )

putative sigma-54 specific transcriptional regulator

NC_010501
(Pseudomonas putida W619)

4e-35

51) Sala_0205
( YP_615262.1 )

sigma-54 dependent trancsriptional regulator

NC_008048
(Sphingopyxis alaskensis RB2256)

1e-34

52) PLES_10441
( YP_002438650.1 )

putative transcriptional regulator

NC_011770
(Pseudomonas aeruginosa LESB58)

7e-35

53) NCGM2_5127
( YP_005983333.1 )

transcriptional regulator

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

7e-35

54) PA14_13000
( YP_789185.1 )

transcriptional regulator

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

7e-35

55) M062_20795
( YP_008134566.1 )

Fis family transcriptional regulator

NC_021577
(Pseudomonas aeruginosa RP73)

8e-35

56) PA3932
( NP_252621.1 )

transcriptional regulator

NC_002516
(Pseudomonas aeruginosa PAO1)

8e-35

57) PAM18_1008
( YP_005973597.1 )

putative transcriptional regulator

NC_017548
(Pseudomonas aeruginosa M18)

9e-35

58) PADK2_04665
( YP_006480928.1 )

transcriptional regulator

NC_018080
(Pseudomonas aeruginosa DK2)

9e-35

59) MDS_4670
( YP_004382453.1 )

sigma-54 factor interaction domain-containing protein

NC_015410
(Pseudomonas mendocina NK-01)

1e-34

60) Pput_5073
( YP_001270375.1 )

sigma-54 factor interaction domain-containing protein

NC_009512
(Pseudomonas putida F1)

2e-34

61) YSA_04462
( YP_006386302.1 )

sigma-54 factor interaction domain-containing protein

NC_017986
(Pseudomonas putida ND6)

2e-34

62) PCA10_01930
( YP_008100530.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

5e-33

63) Pfl01_0222
( YP_345955.1 )

response regulator receiver domain-containing protein

NC_007492
(Pseudomonas fluorescens Pf0-1)

6e-32

64) GU3_07590
( YP_005092024.1 )

Psp operon transcriptional activator PspF

NC_016745
(Oceanimonas sp. GK1)

2e-31

65) Nwat_2550
( YP_003761658.1 )

Fis family sigma-54 specific transcriptional regulator

NC_014315
(Nitrosococcus watsonii C-113)

3e-31

66) PFLU0214
( YP_002869907.1 )

putative sigma-54 dependent regulatory protein

NC_012660
(Pseudomonas fluorescens SBW25)

1e-30

67) PflA506_0225
( YP_006321768.1 )

sigma-54-binding protein

NC_017911
(Pseudomonas fluorescens A506)

4e-30

68) H681_21380
( YP_007659683.1 )

putative transcriptional regulator

NC_020829
(Pseudomonas denitrificans ATCC 13867)

5e-30

69) Plabr_2798
( YP_004270419.1 )

Fis family transcriptional regulator

NC_015174
(Planctomyces brasiliensis DSM 5305)

2e-29

70) MU9_2373
( YP_007505791.1 )

Psp operon transcriptional activator

NC_020418
(Morganella morganii KT)

3e-28

71) AnaeK_2390
( YP_002134746.1 )

Fis family transcriptional regulator

NC_011145
(Anaeromyxobacter sp. K)

1e-26

72) Anae109_1687
( YP_001378875.1 )

sigma-54 dependent trancsriptional regulator

NC_009675
(Anaeromyxobacter sp. Fw109-5)

1e-25

73) Pmen_4342
( YP_001189821.1 )

sigma-54 factor interaction domain-containing protein

NC_009439
(Pseudomonas mendocina ymp)

5e-26

• Sequence Alignments

1) HrpS in NC_007005


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  447 bits (1685),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 265/302 (88%), Positives = 291/302 (97%), Gaps = 0/302 (0%)

Query  1    MNLDDEFDDHLDAERVPNLGIVAESISQLGIDVLLSGETGTGKDTIARRIHNMSGRQGRF  60
            M+LD+ FDD+LD ERVPNLGIVAESISQLGIDVLLSGETGTGKDTIA+RIH +SGR+GR+
Sbjct  1    MDLDEGFDDDLDEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRL  60

Query  61   VPMNCAAIPESLAESELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKL  120
            V+MNCAAIPESLAESELFGVVSGAYTGADRSR+GYIEAAQGGTLYLDEIDSMPL+LQAKL
Sbjct  61   VAMNCAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKL  120

Query  121  LRVLETRALERLGSTSTINLDICVIASAQACLDDAVEEGKFRRDLYFRLNVLTLKLPPLR  180
            LRVLETRALERLGSTSTI+LD+CVIASAQ+ LDDAVE+GKFRRDLYFRLNVLTL+LPPLR
Sbjct  121  LRVLETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLR  180

Query  181  DQPERILPLFTRFVAASAKELSVPIPDVCPLLQQVLTGHHWPGNIRELKAAAKRHVLGFP  240
             QPERILPLF RF+AA+AKEL+V+ +DVCPLLQQVL GH+WPGNIRELKAAAKRHVLGFP
Sbjct  181  TQPERILPLFKRFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFP  240

Query  241  LLGADSQTEEHLACGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKEL  300
            +LG D+Q+EEHLACGLK QLRAIEKALIQQ+LKRHRNCIDAASLELD+PRRTLYRRIKEL
Sbjct  241  VLGVDPQSEEHLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKEL  300

Query  301  SI  302
             I
Sbjct  301  QI  302

2) hrpS in NC_005773


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  440 bits (1657),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 288/288 (100%), Positives = 288/288 (100%), Gaps = 0/288 (0%)

Query  15   RVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAE  74
            RVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAE
Sbjct  15   RVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAE  74

Query  75   SELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGS  134
            SELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGS
Sbjct  75   SELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGS  134

Query  135  TSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVltlqlpplrtqpERILPLFKRFM  194
            TSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFM
Sbjct  135  TSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFM  194

Query  195  AAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLAC  254
            AAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLAC
Sbjct  195  AAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLAC  254

Query  255  GLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302
            GLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI
Sbjct  255  GLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

3) hrpS in NC_004578


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  429 bits (1614),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 253/287 (89%), Positives = 276/287 (97%), Gaps = 0/287 (0%)

Query  16   VPNLGIVAESISQLGIDVLLSGETGTGKDTIARRIHEMSGRKGRLVAMNCAAIPESLAES  75
            VPNLGIVAESISQLGIDVLLSGETGTGKDTIA+RIH +SGRKGRLVAMNCAAIPESLAES
Sbjct  16   VPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAES  75

Query  76   ELFGVVSGAYTGADRSRVGYVEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGST  135
            ELFGVVSGAYTGADRSRVGY+EAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGST
Sbjct  76   ELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGST  135

Query  136  STIKLDICVIASAQCSLDDAVERGQFRRDLYFRLNVLTLKLPPLRNQSDRIVPLFTRFTA  195
            STIKLD+CVIASAQ SLDDAVE+G+FRRDLYFRLNVLTL+LPPLR Q++RI+PLF RF A
Sbjct  136  STIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMA  195

Query  196  AAARELGVPVPDVCPLLHKVLLGHDWPGNIRELKAAAKRHVLGFPLLGAEPQGEEHLACG  255
            AAA+EL V+ +DVCPLL++VLLGH+WPGNIRELKAAAKRHVLGFP+LG +PQ+EEHLACG
Sbjct  196  AAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACG  255

Query  256  LKSQLRVIEKALIQESLKRHDNCVDSVSLELDVPRRTLYRRIKELQI  302
            LKSQLR IEKALIQ+SLKRH NC+D+ SLELD+PRRTLYRRIKELQI
Sbjct  256  LKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

4) Pmen_0032 in NC_009439


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  337 bits (1265),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 193/292 (67%), Positives = 249/292 (86%), Gaps = 2/292 (0%)

Query  12   MNDGGLPNLEVVASSISELNIDVLLTGETGSGKDTLAQYLHKLSGRKGPFVAMNCAAIPE  71
            +++  +PNL +VA SIS+L IDVLL+GETG+GKDT+AQ +H +SGRKG +VAMNCAAIPE
Sbjct  11   LDEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPE  70

Query  72   SLFESELFGVTSGAYTGADHSRMGYVEAAQGGTLYLDEIDSMPAFLQAKLLRVLETRQIE  131
            SL ESELFGV SGAYTGAD+SR+GY+EAAQGGTLYLDEIDSMP  LQAKLLRVLETR +E
Sbjct  71   SLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALE  130

Query  132  RLGSTTPVPLDICVVASAQRSLDALVEQGEFRRDLYFRLNVLTLRLPALRQKREWIIPMF  191
            RLGST+ + LD+CV+ASAQ SLD  VEQG FRRDLYFRLNVLTL+LP+LR + E+I+P+F
Sbjct  131  RLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLF  190

Query  192  ERFAFEASQDMDTALPVIDPAIEHVLLNHDWPGNLRELKSAAKRHVLGINLLGIE--AEQ  249
             RF   A+++++ A + + P +++VLL H+WPGN+RELK+AAKRHVLG+ +LG++  +E+
Sbjct  191  KRFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEE  250

Query  250  PIECDLKCQLRLIEKVLIQESLQRHEHCIEAVLHELDIPRRTLYHRMKELDV  301
             + C+LK QLR IEK LIQ+SL+RH +CI+A   ELD+PRRTLY+R+KEL++
Sbjct  251  HLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

5) hrpR in NC_005773


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  299 bits (1121),  Expect = 8e-83, Method: Compositional matrix adjust.
 Identities = 176/274 (65%), Positives = 226/274 (83%), Gaps = 0/274 (0%)

Query  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90
            L++D+LL GETGTGKDT+A+RIH +S+R G +V+MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  29   LGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGA  88

Query  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGVERLGSTEFIPLDLRVIASA  150
             R+R GYIEA+ GGTLYLDEIDSMPLSLQAKLLRVLE+R++ERLGST  I LD+ VIASA
Sbjct  89   DRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASA  148

Query  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQEIAAEFQRPVPVL  210
            Q +LD+ VEQG FRRDL+FRLNVLTL+LP+LR + E+ILPLF +F    A E++ + + +
Sbjct  149  QSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNVASADV  208

Query  211  DNGRVQILLSHDWPGNVRELKSAAKRFVLGFPLLGAEPMDARDPVTGLRMQMRVIEKMLI  270
                 Q+LL+H+WPGN+RELK+AAKR VLGFP+LG +P    +   GL+ Q+R IEK LI
Sbjct  209  CPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLRAIEKALI  268

Query  271  QDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304
            Q++LKRHR+ +DA   EL++PRRTLY+R+KEL +
Sbjct  269  QQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

6) hrpR in NC_004578


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  299 bits (1122),  Expect = 8e-83, Method: Compositional matrix adjust.
 Identities = 177/274 (65%), Positives = 230/274 (84%), Gaps = 0/274 (0%)

Query  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90
            L++D+LL GETGTGKDT+A+RIH +S+R G +V+MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  29   LGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGA  88

Query  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150
             R+R GYIEA+ GGTLYLDEIDSMPLSLQAKLLRVLE+R++ERLGST  I +D+ +IASA
Sbjct  89   DRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASA  148

Query  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210
            Q +LD+ VEQG FRRDL+FRLNVLTL+LP+LR + E+ILPLF +F  + A E+  +++ +
Sbjct  149  QSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNVASADV  208

Query  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270
             +   Q+LL+H+WPGNIRELK+AAKR VLGFP+LG DP    + A GL++Q+R IEK LI
Sbjct  209  CPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLRAIEKALI  268

Query  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304
            Q++LKRHR+ +DA   EL++PRRTLY+R+KEL +
Sbjct  269  QQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

7) HrpR in NC_007005


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  293 bits (1098),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 176/278 (64%), Positives = 227/278 (82%), Gaps = 8/278 (2%)

Query  31   MDMDLLLCGETGTGKDTLASRIHELSSRTGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90
            +++D+LL GETGTGKDT+A RIH +S+R G +V+MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  29   LGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGA  88

Query  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGVERLGSTDFIPLDLRVIASA  150
             R+R GYIEA+ GGTLYLDEIDSMPLSLQAKLLRVLE+R++ERLGST  I LD+ VIASA
Sbjct  89   DRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASA  148

Query  151  QRPLDELVEQGLFRRDLFFRLNVLTLQLPALRKRREQILPLFDQF----TQDVAAESGRS  206
            Q +LD+ VEQG FRRDL+FRLNVLTLQLP+LR + E+ILPLF +F    ++++   S+  
Sbjct  149  QSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNVASADV  208

Query  207  VPTLDNRRVQILLSHDWPGNVRELKSAAKRFVLGLPLLGAEPVEARDPVTGLRMQMRVIE  266
             P L+    Q+LL+H+WPGN+RELK+AAKR VLG+P+LG +P    +   GL+ Q+R IE
Sbjct  209  CPLLQ----QVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLRAIE  264

Query  267  KMLIQDALKRHRHNFDAVLEELELPRRTLYHRMKELGV  304
            K LIQ++LKRHR+ +DA   EL++PRRTLY+R+KEL +
Sbjct  265  KALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

8) Dd1591_1896 in NC_012912


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  285 bits (1066),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 161/296 (55%), Positives = 237/296 (81%), Gaps = 6/296 (2%)

Query  26   SEDIHGSLASLIHTIAPLNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCAAVPET  85
             E+   +L+ + ++I+ L +D++L GETGTGKDT+A+RIH +SG  G LVA+NCAA+PE+
Sbjct  12   DEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPES  71

Query  86   LAESELFGVVSGAYTGASRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIER  145
            LAESELFGVVSGAYTGA RSR GY+E+A+ G L+LDEIDSMPL+LQAK+LRVLE+R++ER
Sbjct  72   LAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALER  131

Query  146  LGSTQFKPVDMRVIVATQTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTDIILPLFQ  205
            LGST    +D+ VI ++Q++L+  V++G+FRRDLYFRL+ + +QLP LR++ + ILPLF+
Sbjct  132  LGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFK  191

Query  206  RFLHDAAARLKLSVPGVSVIMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPIVADGDGA  265
            RF+  AA  L+++ ++V  ++Q+ LL H+WPGNIRELKAAA R VLG++ + +     ++
Sbjct  192  RFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGV-----DP  246

Query  266  ESDTPLT-SLKVRLRRIERFLIQEALQRNDHCIDTVVSELGIPKRTLYHRIKLLNV  320
            +S+  L+ +LK +LR IE+ LIQ++L+R+ +CID+   EL++P+RTLY+RIK L++
Sbjct  247  QSEEHLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

9) hrpS in NC_014500


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  282 bits (1055),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 158/297 (54%), Positives = 235/297 (80%), Gaps = 6/297 (2%)

Query  26   SEDIHGSLSSLIHTIAPLNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCAAVPET  85
             E+   +L+ + ++I+ L +D++L GETGTGKDT+A+RIH +SG  G LVA+NCAA+PE+
Sbjct  12   DEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPES  71

Query  86   LAESELFGVVSGAYTGASRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIER  145
            LAESELFGVVSGAYTGA RSR GY+E+A+ G L+LDEIDSMPL+LQAK+LRVLE+R++ER
Sbjct  72   LAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALER  131

Query  146  LGSTQFKPVDMRVIVATQTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLFE  205
            LGST    +D+ VI ++Q++L+  V++G+FRRDLYFRL+ + +QLP LR++ E ILPLF 
Sbjct  132  LGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFK  191

Query  206  RFLLEASARLKRPAPGLSAIIQEQLLMHGWPGNIRELKAAAERWVLGLSPVPIASDGDVQ  265
            RF+  A+  L+ +++++ +++Q+ LL H WPGNIRELKAAA R VLG++ + + ++++ +
Sbjct  192  RFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEH  251

Query  266  VMGEDTPLTSLKVRLRRIERFLIQEALQRNDHCIDTVVNELGIPKRTLYHRIKLLNV  322
            +        +LK +LR IE+ LIQ++L+R+ +CID+   EL++P+RTLY+RIK L++
Sbjct  252  LA------CGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

10) Pmen_0033 in NC_009439


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  281 bits (1050),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 170/292 (59%), Positives = 233/292 (80%), Gaps = 6/292 (2%)

Query  19   VPELGITLSA-GHFRMDLLLCGETGTGKDVLARHIHDLSGRTGAFVGINCAAIPEALAES  77
            VP+LGI   + +++ +D+LL GETGTGKD +A++IH +SGR G +V++NCAAIPE+LAES
Sbjct  16   VPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAES  75

Query  78   QLFGVASGAFTGANRSRQGYIEASNDGTLYLDEIDSMPLQLQAKLLRVLETRGVERLGTT  137
            +LFGV SGA+TGA+RSR GYIEA+++GTLYLDEIDSMPL LQAKLLRVLETR++ERLG+T
Sbjct  76   ELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGST  135

Query  138  KFIPLNLRIIASTQRPLEELVEQGLFRRDLLFRLNAMTLSLPPLRQRRELILPLFKRFTR  197
              I L++ +IAS+Q +L++ VEQG FRRDL FRLN +TL LPPLR + E ILPLFKRF  
Sbjct  136  STIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMA  195

Query  198  SLGAKQANGAQALDSQLIQLLLSHPWPGNIRELKSAAKRYVIGLPPIDAGVLADLEDGDF  257
            + +     ++  + + L Q+LL+H WPGNIRELK+AAKR V+G+P     VL+   +++ 
Sbjct  196  AAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFP-----VLGVDPQSEE  250

Query  258  PHDRGLKKRMRAVEKMLIQDALKRHKNGLEAVAEELGISRRTLYQRIKELDV  309
                GLK ++RA+EK LIQ++LKRH+N ++A + EL+++RRTLY+RIKEL++
Sbjct  251  HLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

11) Dd586_1893 in NC_013592


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  281 bits (1051),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 163/297 (55%), Positives = 236/297 (80%), Gaps = 7/297 (2%)

Query  26   LEDIHGP-LSSLIHTIAPLHVDIVLEGETGTGKDTLARRIHQLSGCPGPLVAVNCAAVPE  84
            L++ + P L+ + ++I+ L +D++L GETGTGKDT+A+RIH +SG  G LVA+NCAA+PE
Sbjct  11   LDEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPE  70

Query  85   TLAESELFGVVSGAYTGASRSRAGYLEIADKGILFLDEIDSMPLTLQAKMLRVLESRGIE  144
            +LAESELFGVVSGAYTGA RSR GY+E A+ G L+LDEIDSMPL+LQAK+LRVLE+R++E
Sbjct  71   SLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALE  130

Query  145  RLGSTQFKPVNMRVIVATQTPLHKLVEKGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLF  204
            RLGST    +++ VI ++Q++L+  VE+G+FRRDLYFRL+ + +QLP LR++ E ILPLF
Sbjct  131  RLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLF  190

Query  205  QRFLHDAAARLKRPVPGVSAMMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPVAADGGK  264
            +RF+  AA  L+ + ++V +++Q+ LL H+WPGNIRELKAAA R VLG++ + V +++  
Sbjct  191  KRFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--  248

Query  265  AGNDTPLT-SLKVRLRRIERFLIQEALQRNDHCIDNVVHELGIPKRTLYHRIKLLNV  320
               +  L+ +LK +LR IE+ LIQ++L+R+ +CID    EL++P+RTLY+RIK L++
Sbjct  249  ---EEHLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

12) PSEBR_a5366 in NC_015379


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  277 bits (1038),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 162/286 (57%), Positives = 228/286 (80%), Gaps = 1/286 (0%)

Query  19   NLEAFVQSVAPLMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQL  78
            NL    +S++ L IDVLL GETGTGKDT+A++IH +SG  G++VA+NCAAIPE+LAES+L
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESEL  77

Query  79   FGANTGAFTGANQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQS  138
            FG  +GA+TGA+++R G++EAA+ GTLYLDEIDSMPL+LQAKLLRVLE+R+++RLGST +
Sbjct  78   FGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTST  137

Query  139  IPVNMRVIASAQCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRRE  198
            I +++ VIASAQ +L++ VE+G FRRDLYFRLN+++L+LPPLR++ ERI+PLF+ ++   
Sbjct  138  IKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAA  197

Query  199  AQALDRPYVAPSPALLRQLLGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKL  258
            A+ L+ +     P L + LLG  WPGNIREL++AAKR VLG+P L    Q E++ +   L
Sbjct  198  AKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLAC-GL  256

Query  259  KEHLQQFEKILIEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQI  304
            K +L+ +EK LI++ ++RH++CID    EL+++RRTLY R+K LQI
Sbjct  257  KSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

13) hrpS in NC_016830


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  275 bits (1028),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 160/286 (56%), Positives = 225/286 (79%), Gaps = 1/286 (0%)

Query  19   NLEAFVQCVAPLMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQL  78
            NL    + ++ L IDVLL GETGTGKDT+A++IH +SG  G++VA+NCAAIPE+LAES+L
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESEL  77

Query  79   FGANTGAFTGASQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQN  138
            FG  +GA+TGA ++R G++EAA+ GTLYLDEIDSMPL+LQAKLLRVLE+R+++RLGST  
Sbjct  78   FGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTST  137

Query  139  IPVNMRVIASAQCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRRE  198
            I +++ VIASAQ +L++ VE+G FRRDLYFRLN+++L+LPPLR++ ERI+PLF+ ++   
Sbjct  138  IKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAA  197

Query  199  AQALDRPYVAPSPALLRQLIGYAWPGNIRELQSAAKRYVLGLPALPRAEQLEHNSSTLKL  258
            A+ L+ +     P L + L+G  WPGNIREL++AAKR VLG+P L    Q E++ +   L
Sbjct  198  AKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLAC-GL  256

Query  259  KEHLQQFEKILIEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQI  304
            K +L+ +EK LI++ ++RH++CID    EL+++RRTLY R+K LQI
Sbjct  257  KSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

14) Ser39006_2908 in NC_022268


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  274 bits (1025),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 161/296 (55%), Positives = 226/296 (77%), Gaps = 1/296 (0%)

Query  22   FEYPREDIHGTLLSLIND-IAPLNVDIVLEGETGTGKDTLARRIHKLSGCSGPLVAVNCA  80
            F+   ++ +   L+++ + I+ L +D++L GETGTGKDT+A+RIH +SG  G LVA+NCA
Sbjct  7    FDDDLDEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCA  66

Query  81   AIPESLAESELFGVVSGAYTGANRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLEN  140
            AIPESLAESELFGVVSGAYTGA+RSR GY+E+A+ G L+LDEIDSMPL+LQAK+LRVLE 
Sbjct  67   AIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLET  126

Query  141  RGIERLGSTQFKAVDMRVIVATQTPLSKLVEEGRFRRDLYFRLDTVKIQLPTLRSRIDII  200
            R++ERLGST    +D+ VI ++Q++L   VE+G+FRRDLYFRL+ + +QLP LR++ + I
Sbjct  127  RALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERI  186

Query  201  LPMFQRFTREASARLKRSSPPIPVSVHERLLTHSWQGNIRELKAAAERWVLGLPPLPMVM  260
            LP+F+RF   A+  L+ +S+ +   +++ LL H W GNIRELKAAA R VLG+P L +  
Sbjct  187  LPLFKRFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDP  246

Query  261  ETSAQHHPLLKERLRRIEKFLIQDALTRNGHCIDDVVTELGIPKRTLYHRIKLLNV  316
            ++  +    LK +LR IEK LIQ++L R+ +CID    EL++P+RTLY+RIK L++
Sbjct  247  QSEEHLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

15) rspS in NC_017911


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  273 bits (1021),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 163/279 (59%), Positives = 225/279 (81%), Gaps = 0/279 (0%)

Query  26   NNTAALNVDILLLGETGTGKDTLAQRIHRLSGRRGNFVAVNCAAIPESLAESQLFGVNSG  85
            ++ + L +D+LL GETGTGKDT+AQRIH +SGR+G +VA+NCAAIPESLAES+LFGV SG
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  86   AYTGAVQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLRVLECRGVERLGSTRFISVDMR  145
            AYTGA +SR G++EAA+ GTLYLDEIDSMPLSLQAKLLRVLE R++ERLGST  I +D+ 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  146  VIASAQQSLQIMVDQGAFRRDLYFRLNVVNIELPALRDRRERIIPLFLQMIQEEADQFNC  205
            VIASAQ SL+  V+QG FRRDLYFRLNV+ ++LP+LR + ERI+PLF + +   A ++N 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  206  TPPSPSDGLLHELLCHPWLGNVRELRSAAKRFVLGLPPLSAPACRQPPPQTDLKARLQQI  265
            +++     L + LL H W GN+REL++AAKR VLG+P L+  +  +     +LK++L+ I
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLRAI  263

Query  266  EKALIEESMYRHQHCVDTVAIELGVAKRTLYYRMKQLNI  304
            EKALI++S+ RH++C+D+ ++EL++++RTLY R+K+L+I
Sbjct  264  EKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

16) hrpS in NC_004547


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 156/291 (54%), Positives = 226/291 (78%), Gaps = 0/291 (0%)

Query  49   AEDIHSSLSPIINVIAPLNVDIVLEGETGTGKDTLANRIHQISQCSGPLVAVNCAAVPEN  108
             E+  ++L+ + + I+ L +D++L GETGTGKDT+A+RIH IS   G LVA+NCAA+PE+
Sbjct  12   DEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPES  71

Query  109  LAESELFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKR  168
            LAESELFGVVSGAYTGA+RSR GY+E+A+ G L+LDEIDSMP++LQAK+LRVLE+R++ R
Sbjct  72   LAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALER  131

Query  169  LGSTQFTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQ  228
            LGST    +D+ VI ++Q++L + VE+G FRRDLYFRL+ + +QLP LR++++ ILPLF+
Sbjct  132  LGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFK  191

Query  229  RFSQEAAVRLRMTLPPMTAEIDEQLLTHSWPGNIRELKAAADRWAMGLSPLAEIQQLLHP  288
            RF   AA  L ++ + + + +++ LL H WPGNIRELKAAA R  +G++ L+   Q  + 
Sbjct  192  RFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEH  251

Query  289  RPLQLKDRLKRIEKFLIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNV  339
             +  LK +L+ IEK LIQ++L+RH +CID   +EL++P+RTLY+R+K L++
Sbjct  252  LACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

17) PCC21_022790 in NC_018525


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  267 bits (999),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 156/300 (52%), Positives = 232/300 (78%), Gaps = 2/300 (0%)

Query  43   SSGHSTHTADDIHSSLAPIINVIAPLNVDIVLEGETGTGKDTLANRIHQLSRCSGPLVAV  102
              G   +  ++  ++L+ + + I+ L +D++L GETGTGKDT+A+RIH +S   G LVA+
Sbjct  4    DEGFDDDLDEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAM  63

Query  103  NCAAVPENLAESELFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRV  162
            NCAA+PE+LAESELFGVVSGAYTGA+RSR GY+E+A+ G L+LDEIDSMP++LQAK+LRV
Sbjct  64   NCAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRV  123

Query  163  LESRGVKRLGSTQFTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRS  222
            LE+R++ RLGST    +D+ VI ++Q++L + VE+G FRRDLYFRL+ + +QLP LR+++
Sbjct  124  LETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQP  183

Query  223  DLILPLFQRFSQEAAVRLKMTLPPMTAEIHEQLLTHSWPGNIRELKAAADRWALGLSPLA  282
            + ILPLF+RF   AA  L+++ + + + +++ LL H WPGNIRELKAAA R  LG++ L+
Sbjct  184  ERILPLFKRFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLG  243

Query  283  EIQPLLHPR-PLQLKDRLKRIEKFLIQDALRRHDHCIDDVIVELGIPKRTLYHRLKVLNV  341
             ++P  + + +  LK +L+ IEK LIQ++L+RH +CID   +EL++P+RTLY+R+K L++
Sbjct  244  -VDPQSEEHLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

18) PC1_2201 in NC_012917


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  263 bits (984),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 154/292 (53%), Positives = 228/292 (79%), Gaps = 2/292 (0%)

Query  47   ADDIHSSLSPIINVIAPLNVDIVLEGETGTGKDTLANRIHRLSRCSGPLVAVNCAAVPEN  106
             ++  ++L+ + + I+ L +D++L GETGTGKDT+A+RIH +S   G LVA+NCAA+PE+
Sbjct  12   DEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPES  71

Query  107  LAESELFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKR  166
            LAESELFGVVSGAYTGA+RSR GY+E+A+ G L+LDEIDSMP++LQAK+LRVLE+R++ R
Sbjct  72   LAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALER  131

Query  167  LGSTQFTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQ  226
            LGST    +D+ VI ++Q++L + VE+G FRRDLYFRL+ + +QLP LR++++ ILPLF+
Sbjct  132  LGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFK  191

Query  227  RFSQEAAVRLRMTQPPMTAEIYEQLLTHSWPGNIRELKAAADRWAMGLSPLAEIQPLLHP  286
            RF   AA  L ++ + + + + + LL H WPGNIRELKAAA R  +G++ L+ ++P  + 
Sbjct  192  RFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLG-VDPQSEE  250

Query  287  R-PLQLKDRLKRIEKFLIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNV  337
            + +  LK +L+ IEK LIQ++L+RH +CID   +EL++P+RTLY+R+K L++
Sbjct  251  HLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

19) hrpS in NC_017445


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  260 bits (971),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 155/285 (55%), Positives = 220/285 (78%), Gaps = 1/285 (0%)

Query  12   TLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESEL  71
             L+ +  +++ L ID++L GETGTGKDT+A++IH +SG KG+LVA+NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESEL  77

Query  72   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRF  131
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPLSLQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTST  137

Query  132  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKA  191
              +++ VI ++Q++L   VE+G FRRDLYFRLN +++QL PLR++ E I+PLF+ F+  A
Sbjct  138  IKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAA  197

Query  192  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERP-QLK  250
            A  L+ A+ ++     + LL+  WPGNIRELKAAA R VLG+P LG+  +  ++ +  LK
Sbjct  198  AKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLK  257

Query  251  ELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  295
              +R IEK +I++ L RH + ID A+ EL++P RTLY+RIK L++
Sbjct  258  SQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

20) hrpS in NC_017390


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  260 bits (970),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 155/285 (55%), Positives = 220/285 (78%), Gaps = 1/285 (0%)

Query  33   TLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT+A++IH +SG KG+LVA+NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTQF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPLSLQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKA  212
              +++ VI ++Q++L   VE+G FRRDLYFRLN +++QL PLR++ E I+PLF+ F+  A
Sbjct  138  IKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAA  197

Query  213  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERP-QLK  271
            A  L+ A+ ++     + LL+  WPGNIRELKAAA R VLG+P LG+  +  ++ +  LK
Sbjct  198  AKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLK  257

Query  272  ELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK +I++ L RH + ID A+ EL++P RTLY+RIK L++
Sbjct  258  SQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

21) hrpS in NC_012214


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  260 bits (970),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 155/285 (55%), Positives = 220/285 (78%), Gaps = 1/285 (0%)

Query  33   TLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT+A++IH +SG KG+LVA+NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTQF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPLSLQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKA  212
              +++ VI ++Q++L   VE+G FRRDLYFRLN +++QL PLR++ E I+PLF+ F+  A
Sbjct  138  IKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAA  197

Query  213  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERP-QLK  271
            A  L+ A+ ++     + LL+  WPGNIRELKAAA R VLG+P LG+  +  ++ +  LK
Sbjct  198  AKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLK  257

Query  272  ELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK +I++ L RH + ID A+ EL++P RTLY+RIK L++
Sbjct  258  SQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

22) hrpS in NC_010694


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  258 bits (964),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 155/285 (55%), Positives = 219/285 (77%), Gaps = 1/285 (0%)

Query  33   TLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCSGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT+A++IH +SG  G+LVA+NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAAHNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPLSLQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEIIIPLFRYFIQQA  212
              +++ VI ++Q++L   VE+G FRRDLYFRLN +++QL PLR++ E I+PLF+ F+  A
Sbjct  138  IKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAA  197

Query  213  ATTLQCPQREITQEHYECLLSYGWPGNIRELKAAAERFVLGLPPLGFSCHCEDERP-RLK  271
            A  L+ +  ++     + LL+  WPGNIRELKAAA R VLG+P LG   + E++ +  LK
Sbjct  198  AKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLK  257

Query  272  EMMRRIEKSLIHDCLLRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK+LI++ L RH + ID A+ EL++P RTLY+RIK L++
Sbjct  258  SQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

23) rspR in NC_012660


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  255 bits (952),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 162/286 (57%), Positives = 221/286 (78%), Gaps = 0/286 (0%)

Query  19   PDIEEILSGTAQLNIDILLLGETGTGKDTLAQRIHRLSGRRGSFIAVNCAAIPETLAESQ  78
            P++  +  + +QL ID+LL GETGTGKDT+AQRIH +SGR+G ++A+NCAAIPE+LAES+
Sbjct  17   PNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESE  76

Query  79   LFGVNSGAYTGAVQSRAGFIEAAHLGTLYLDEIDSMPLSLQAKLLRTLESRGVERLGSTR  138
            LFGV SGAYTGA +SR G+IEAA+ GTLYLDEIDSMPLSLQAKLLR LE+R++ERLGST 
Sbjct  77   LFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTS  136

Query  139  FIPVDMRVIASAQQSLYEMVERGTFRRDLYFRLSVVNIQLPSLRECRDRIIPLFLTMIRQ  198
             I +D+ VIASAQ SL + VE+G FRRDLYFRL+V+ +QLP+LR   +RI+PLF   +  
Sbjct  137  TIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAA  196

Query  199  EAESFKCPYpqppssllqqllCHPWPGNVRELSSTAKRFVLGLPPLSVRGKNPKISEASL  258
             A  ++ + ++  + L Q LL H WPGN+REL ++AKR VLG+P L+V  ++      +L
Sbjct  197  AAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGL  256

Query  259  KERLQRIEKSLIEESLHRHNGNVDLAAADLRVAKRTFYYRMKQLGI  304
            K +L+ IEK+LI++SL RH   +D A+ +L +++RT+Y R+K+L I
Sbjct  257  KSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

24) hrpS in NC_013971


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  253 bits (945),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 152/285 (54%), Positives = 219/285 (77%), Gaps = 1/285 (0%)

Query  33   TLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT+A++IH +SG +G+LVA+NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPLSLQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPMFRSFIQKA  212
              +++ VI ++Q++L   VE+G FRRDLYFRLN +++QL PLR++ E I+P+F+ F+  A
Sbjct  138  IKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAA  197

Query  213  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDLPCHCGQERP-QLK  271
            A  L+ A+ ++     + LL+  WPGNIRELKAAA R VLG+P L++  +  ++ +  LK
Sbjct  198  AKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLK  257

Query  272  ELMRRIEKNVIYDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK +I + L RH + ID A+ EL++P RTLY+RIK L++
Sbjct  258  SQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

25) hrpS in NC_013961


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  253 bits (945),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 152/285 (54%), Positives = 219/285 (77%), Gaps = 1/285 (0%)

Query  33   TLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT+A++IH +SG +G+LVA+NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPLSLQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPMFRSFIQKA  212
              +++ VI ++Q++L   VE+G FRRDLYFRLN +++QL PLR++ E I+P+F+ F+  A
Sbjct  138  IKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAA  197

Query  213  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDLPCHCGQERP-QLK  271
            A  L+ A+ ++     + LL+  WPGNIRELKAAA R VLG+P L++  +  ++ +  LK
Sbjct  198  AKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLK  257

Query  272  ELMRRIEKNVIYDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK +I + L RH + ID A+ EL++P RTLY+RIK L++
Sbjct  258  SQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

26) D781_3924 in NC_020064


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  251 bits (936),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 154/281 (55%), Positives = 218/281 (78%), Gaps = 1/281 (0%)

Query  44   LTKIVAPLHVDVLLEGETGTGKDTLARRIYELSGGNGPFVPVNCGAIPESLAESELFGVE  103
            ++  ++ L +DVLL GETGTGKDT+A+RI  +SG +G +V++NC+AIPESLAESELFGV 
Sbjct  22   VAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVV  81

Query  104  AGAYTGASHARAGYLETANNGILFLDEIDSMPLTVQAKLLRVLETRTITRLGSTKPISLH  163
            +GAYTGA ++R GY+E+A+ G L+LDEIDSMPL++QAKLLRVLETR++ RLGST  I L+
Sbjct  82   SGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLD  141

Query  164  LRVIVAAQTPLEQLVEAGRFRRDLCFRLNTIKLETPTLRSRPELIIPLFRRFAIESALRL  223
            + VI +AQ++L++ VE G+FRRDL FRLN + L+ P LR++PE I+PLF+RF   +A  L
Sbjct  142  VCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  224  GMPHPPRSTALDEALLLHCWPGNLRELKAAAERFILGLPPLN-QALPQESGAVLLKERLK  282
             ++ +     L++ LL H WPGN+RELKAAA R +LG+P L  ++ ++E  A  LK +L+
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLR  261

Query  283  RIERSLIHDCLhrhdhriddvvhELGIPRRTLYHRLKQLNI  323
             IE++LI++ L RH + ID    EL++PRRTLY+R+K+L+I
Sbjct  262  AIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

27) H045_00470 in NC_020209


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  218 bits (813),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 139/240 (58%), Positives = 191/240 (80%), Gaps = 0/240 (0%)

Query  1    MNCAAIPESLAESQLFGVNSGAFTGAMQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLR  60
            MNCAAIPESLAES+LFGV SGA+TGA +SR G++EAA+ GTLYLDEIDSMPLSLQAKLLR
Sbjct  63   MNCAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLR  122

Query  61   VLESRGVERLGSTRFIPVDMRVIASAQHSLHAMVEQGTFRRDLFFRLNVVTIQLPALRDQ  120
            VLE+R++ERLGST  I +D+ VIASAQ SL+  VEQG FRRDL+FRLNV+T+QLP+LR Q
Sbjct  123  VLETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQ  182

Query  121  RERIVPLFLQMVRQEAELFECPAPTPTAELLQQLLCQSWLGNIRELRSTAKRFVlglppl  180
             ERI+PLF + +   A  ++ +++   + L Q LL + W GNIREL+++AKR VLG+P L
Sbjct  183  PERILPLFKRFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

Query  181  spplsKPQGNEMSLKARLQEIEKALIEESMQRNDRCVDRVAIEMGIAKRTLYHRMKQLAI  240
            +      +    +LK++L+ IEKALI++S++R+  C+D  ++E+++++RTLY+R+K+L I
Sbjct  243  GVDPQSEEHLACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

28) dctD in NC_011983


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  179 bits (662),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 113/279 (41%), Positives = 187/279 (68%), Gaps = 8/279 (2%)

Query  20   IADTDVDVLVTGETGSGKEVVASLLHRWSRRAKGNFVALNCGALPETVIESELFGHEPGA  79
            I++ ++DVL++GETG+GK+ +A  +H  S R KG +VA+NC+A+PE++ ESELFG  +GA
Sbjct  26   ISQLGIDVLLSGETGTGKDTIAQRIHTISGR-KGRLVAMNCAAIPESLAESELFGVVSGA  84

Query  80   FTGAQKKRIGRIEHASAGTLFLDEIESMPPAVQVQLLRVLEMREVTPLGTNEVRPVDLRV  139
            +TGA++ R+G IE A +GTL+LDEI+SMP ++Q +LLRVLE R +  LG+     +D+ V
Sbjct  85   YTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCV  144

Query  140  VAAAKVDLGDPRQRGDFREDLYYRLNVVTISIPPLRDRRDDIPLLFGYFAERAASRFKRD  199
            +A+A+  L+D+ ++G FR DLY+RLNV+T+ +PPLR + + I  LF  F   AA  ++  
Sbjct  145  IASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNVA  204

Query  200  VPTMSTAIRRHLQHHDWPGNVRELSHFAERFVLGLESAAGSKPGETPSTDTVLP--LPAR  257
             + +   +++ L  H+WPGN+REL   A R VLG+        G  P ++  L+  L ++
Sbjct  205  SADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL-----GVDPQSEEHLACGLKSQ  259

Query  258  VERYEADLIRETLAQNGGDVRRTIEALGIPRKTFYDKLQ  296
            +   E  LI+++L ++   +  +   L++PR+T+Y +++
Sbjct  260  LRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIK  298

29) DHBDCA_p1762 in NC_018866


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 117/289 (41%), Positives = 192/289 (67%), Gaps = 13/289 (4%)

Query  38   ARNISKSTYNVLLNGESGTGKEIFAQAIHHDYCPEGPFVALNCASIPRNLIESELFGYEG  97
            A +IS+   +VLL+GE+GTGK+ +AQ IH      G +VA+NCA+IP +L ESELFG  +
Sbjct  23   AESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVS  82

Query  98   GAFTGANKNGQPGKIEAANGGTLFLDEIGDMPLEVQPVLLRVLEDKRVVRINSSKYTTVN  157
            GA+TGA++ ++ G IEAA+GGTL+LDEI+ MPL +Q+ LLRVLE + + R+ S+    ++
Sbjct  83   GAYTGADR-SRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLD  141

Query  158  FRLIAATNQNLFQMVQEKTFRSDLYFRLSVLAIDIPPLRDRGKDILLLAHYFLDQISKEI  217
              +IA+++ +L + V++  FR DLYFRL+VL++++PPLR +   IL L   F+   +KE+
Sbjct  142  VCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  218  QCEPPKLSFEVYKALVEYTWPGNIRQLKNAMVYAVFKAKNGILNIGDLPNEIKHRQTTVS  277
            +  ++ +   + + L+   WPGNIR+LK A       AK  +L +  L  +  + +  ++
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAA-------AKRHVLGFPVLGVD-PQSEEHLA  253

Query  278  VTQNNDPLPLRDIQKEAIMHALCKNKN-KDEAARELGLSKSTLYRKIKE  325
               +++   LR I+K  I ++L +++N  D A+ EL++++ TLYR+IKE
Sbjct  254  CGLKSQ---LRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKE  299

30) DCF50_p1771 in NC_018867


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  172 bits (635),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 117/289 (41%), Positives = 192/289 (67%), Gaps = 13/289 (4%)

Query  38   ARNISKSTYNVLLNGESGTGKEIFAQAIHHDYCPEGPFVALNCASIPRNLIESELFGYEG  97
            A +IS+   +VLL+GE+GTGK+ +AQ IH      G +VA+NCA+IP +L ESELFG  +
Sbjct  23   AESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVS  82

Query  98   GAFTGANKNGQPGKIEAANGGTLFLDEIGDMPLEVQPVLLRVLEDKRVVRINSSKYTTVN  157
            GA+TGA++ ++ G IEAA+GGTL+LDEI+ MPL +Q+ LLRVLE + + R+ S+    ++
Sbjct  83   GAYTGADR-SRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLD  141

Query  158  FRLIAATNQNLFQMVQEKTFRSDLYFRLSVLAIDIPPLRDRGKDILLLAHYFLDQISKEI  217
              +IA+++ +L + V++  FR DLYFRL+VL++++PPLR +   IL L   F+   +KE+
Sbjct  142  VCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  218  QCEPPKLSFEVYKALVEYTWPGNIRQLKNAMVYAVFKAKNGILNIGDLPNEIKHRQTTVS  277
            +  ++ +   + + L+   WPGNIR+LK A       AK  +L +  L  +  + +  ++
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAA-------AKRHVLGFPVLGVD-PQSEEHLA  253

Query  278  VTQNNDPLPLRDIQKEAIMHALCKNKN-KDEAARELGLSKSTLYRKIKE  325
               +++   LR I+K  I ++L +++N  D A+ EL++++ TLYR+IKE
Sbjct  254  CGLKSQ---LRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKE  299

31) atoC in NC_012962


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  166 bits (613),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 117/292 (41%), Positives = 188/292 (65%), Gaps = 24/292 (8%)

Query  45   VLITGESGTGKELIAKAIHYHSPRAKGPFIKINCGALPESLLESELFGHEKGAFTGAQIQ  104
            VL++GE+GTGK+ IA+ IH  S R KG ++ +NC+A+PESL ESELFG   GA+TGA+  
Sbjct  33   VLLSGETGTGKDTIAQRIHTISGR-KGRLVAMNCAAIPESLAESELFGVVSGAYTGADRS  91

Query  105  RQGLFERANQGTLLLDEVGEMSLNLQAKLLRVLQEKEFERLGGNQTIKTDIRLIAATNRN  164
            R G +E A+ GTL LDE++ M+L+LQAKLLRVL+ + +ERLG+  TIK D+ +IA+++ +
Sbjct  92   RVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASAQSS  151

Query  165  LATMVERAEFRQDLFYRLNVIHLSPPPLRERPEDIALLAQHFLQKFSAENNKEIIELDAS  224
            L   VE++ FR+DL++RLNV+ L  PPLR +PE I  L ++F+   +A ++ ++   D  
Sbjct  152  LDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMA--AAAKELNVASADVC  209

Query  225  TL--PILAAYHWPGNVRELSNALERAVIMSTGSVIFPDDLPEHLLFKPPLPLSSEHQQTL  282
             L   +L + +WPGN+REL  A  R                 H+L  P L + ++ ++ L
Sbjct  210  PLLQQVLLGHEWPGNIRELKAAAKR-----------------HVLGFPVLGVDPQSEEHL  252

Query  283  ERSHSLKESIKAYERKLISAALANNQGNRSQTARMLGISRRALMYKLQEYRI  334
              + +LK  ++A E+ LI  +L  ++     ++  L+++RR+L  +++E +I
Sbjct  253  --ACGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

32) SSON53_16880 in NC_016822


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  166 bits (612),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 120/293 (41%), Positives = 177/293 (61%), Gaps = 14/293 (4%)

Query  85   VEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHE  144
             E ++Q +  VL+ GETGTGK+ IA+ IH +SGR+ R +V MNCAA+P +L ES+LFG  
Sbjct  23   AESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGR-LVAMNCAAIPESLAESELFGVV  81

Query  145  RGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTD  204
             GA+TGA   R+G +E A+ ++L+LDE++ MPL LQ+KLLRVL+ + +ERLGS   I+ D
Sbjct  82   SGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLD  141

Query  205  VRLIAATNRDLKKMVADREFHSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRL  264
            V +IA+++  L   V +  F+ DLY+RLNV+ ++LPPLR +PE I  L K F    A+ L
Sbjct  142  VCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  265  GRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDIVL-PEPETPP  323
                  + +   + L   EWPGN+REL     R V         L++P + + P++E   
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHV---------LGFPVLGVDPQSEEHL  252

Query  324  AATVVAQEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGI  376
            A  + +Q    E  LI + LK     +    +A+  L++ R TL  R+K L I
Sbjct  253  ACGLKSQLRAIEKALIQQSLKRHRNCID---AASLELDMPRRTLYRRIKELQI  302

33) Nhal_2343 in NC_013960


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  158 bits (584),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 121/276 (44%), Positives = 180/276 (66%), Gaps = 14/276 (5%)

Query  48   VLISGESGTGKEVLAHYIHR-HSRCCEGPFVAINCAAIPENMLEATLFGYEKGAFTGAHQ  106
            VL+SGE+GTGK+ +A+ IH   +R   G +VA+NCAAIPE++ E+ LFG   GA+TGA++
Sbjct  33   VLLSGETGTGKDTIAQRIHTISGR--KGRLVAMNCAAIPESLAESELFGVVSGAYTGADR  90

Query  107  TRPGKFEQAQGGTLLLDEISEMDLDLQAKLLRVLQEREVERLGGCKVIPLDVRILATTNQ  166
            +R G +E AQGGTL LDEI  M L LQAKLLRVL+ R +ERLG+   I LDV ++A+++ 
Sbjct  91   SRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASAQS  150

Query  167  DLREQIGNGQFREDLYYRLNVFPLQLPPLRERTQDIlplarrltasraaaVGRLPPRLTL  226
             L + + +G+FR DLY+RLNV+ LQLPPLR + + ILPL +R+ A+ A  +   ++ +  
Sbjct  151  SLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNVASADVCP  210

Query  227  AAETKLLAHPWPGNIRELDNVIQRALILEEGEAITAQALAFEAGMEAPLPRGVGELSKDL  286
              +  LL+H WPGNIREL    +R       + +    L+ ++  E  L+ G   L  +L
Sbjct  211  LLQQVLLGHEWPGNIRELKAAAKR-------HVLGFPVLGVDPQSEEHLACG---LKSQL  260

Query  287  KSHEKQLILDTLARCGGRRKQAAAQLGISERTLRYK  322
            ++ EK LI ++L R       A+ +L+++ RTL Y+
Sbjct  261  RAIEKALIQQSLKRHRNCIDAASLELDMPRRTL-YR  295

34) Entas_2343 in NC_015968


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  148 bits (546),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 96/235 (41%), Positives = 155/235 (66%), Gaps = 4/235 (1%)

Query  3    EFKDNLLGEANSFLEVLEQVSRLAPLNKPVLIIGERGTGKELIANRLHFLSGRWDGPFIS  62
             F D+L  E  + L ++ +   ++ L   VL+ GE GTGK+ IA+R+H +SGR  G +++
Sbjct  6    GFDDDLDEERVPNLGIVAE--SISQLGIDVLLSGETGTGKDTIAQRIHTISGR-KGRLVA  62

Query  63   LNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMLVQEKLLR  122
            +NCAA+ E+L +SELFG  +GA+TGA++ + G +E A+GGTL+LDE+ + P+ +Q KLLR
Sbjct  63   MNCAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLR  122

Query  123  VIEYGELERVGGSQPLQVNVRLVCATNADLPQMVAQDKFRADLLDRLAFDVVQLPPLRER  182
            V+E   LER+G++  ++++V ++ ++++ L + V Q+KFR DL  RL    +QLPPLR +
Sbjct  123  VLETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQ  182

Query  183  QSDIMLLAEQFAIQMCRELGLPLFPGFSDYARETLLGYHWPGNIRELKNVVERSV  237
               I+ L  +F     +EL ++  ++     ++ LLG +WPGNIRELK    R V
Sbjct  183  PERILPLFKRFMAAAAKELNVA-SADVCPLLQQVLLGHEWPGNIRELKAAAKRHV  236

35) SCE1572_16595 in NC_021658


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  145 bits (533),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 118/286 (42%), Positives = 189/286 (67%), Gaps = 7/286 (2%)

Query  24   ETVAPTPLPVLILGETGTGKEVVAEWIAGMSRHPRERFVKVNCAslseslveselFGHER  83
            E+++   + VL+ GETGTGK+ +A++I  +S + + R+V +NCA+++ESL ESELFG   
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGR-KGRLVAMNCAAIPESLAESELFGVVS  82

Query  84   GAFTGAVAPREGLFEAAHEGTLFLDEVGELSPRTQAKLLRTLEYGEIVRVGSTRPRRVDV  143
            GA+TGA  +R G +EAA+ GTL+LDE++ ++   QAKLLR LE   + R+GST   ++DV
Sbjct  83   GAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDV  142

Query  144  RVIAATHRDLEQMVRDGDFRQDLYFRLNAVTLRIPPLRARTTEVlplaelfaarlarrlg  203
             VIA+++  L++ V +G FR+DLYFRLN +TL++PPLR++   +LPL   F A  A+ L 
Sbjct  143  CVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELN  202

Query  204  rpaprlapeaTAALLAHTWPGNIRELRHVIDRAVVMSKGGPIVADHLMLEAPREKADAGI  263
             +++ + P     LL+H WPGNIREL+    R V+   G P+++ +     + E    G+
Sbjct  203  VASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVL---GFPVLGVD---PQSEEHLACGL  256

Query  264  KGDLRTFERDRIVAALDRTRQNQTRAAELLGVSRRTLTNKLNAYGI  309
            K++LR++E+  I  +L R R+    A+  L+++RRTL  +++   I
Sbjct  257  KSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302

36) Glov_0737 in NC_010814


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  145 bits (533),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 119/287 (42%), Positives = 186/287 (65%), Gaps = 10/287 (3%)

Query  120  AERIADSRLSVIITGETGTGKELFAKAIHFNSPRSAKPFVAVNCSAIPETIFESEMFGIE  179
            AE I++  + V+++GETGTGK+ +A+ IH  S R ++ +VA+NC+AIPE++ ESE+FG+ 
Sbjct  23   AESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGR-LVAMNCAAIPESLAESELFGVV  81

Query  180  KGVATGVE-ARIGKIQQAQGGTLFLDEVGEMPLQLQAKllrvleertlervGSRTAIPVD  238
             G  TG + +R+G I+ AQGGTL+LDE++ MPL LQAKLLRVLE R+LER+GS ++I +D
Sbjct  82   SGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLD  141

Query  239  LRIIAATNRDLTKEIAKGSFREDLYYRLNGVTLRIPPLRERKGDIDLIARQFLEKWGRSC  298
            + +IA+++  L   + +G FR DLY+RLN +TL++PPLR +   I  + ++F+   ++  
Sbjct  142  VCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  299  GRPPMRIAKEALERLRGYTWPGNVRELDNEIERAVALAYGDTITMTDLSDPLQQQTTLPA  358
              ++  +     + L G  WPGN+REL     R V L++        L+   Q +  L A
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHV-LGF------PVLGVDPQSEEHL-A  253

Query  359  AGGKSLLKDSEKQLIEQALKEAKGNKTQAAERLGMSREGLRKKLKRL  405
             G KS L+  EK LI+Q+LK  +     A+  L+M+R  L +++K L
Sbjct  254  CGLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKEL  300

37) L483_30985 in NC_021491


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  144 bits (529),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 95/230 (42%), Positives = 147/230 (64%), Gaps = 8/230 (3%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSARLQR  223
            ++A++   L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F++  +  L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLVSEAAQQVLEAHFWPGNTRELE-----NVIHFALLVNDGAEIQPED  268
            + + V    QQVL +H WPGN REL      +V+ F++L   G + Q+E+
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL---GVDPQSEE  250

38) zraR [H] in NC_019902


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  144 bits (528),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 95/232 (41%), Positives = 152/232 (66%), Gaps = 5/232 (2%)

Query  1    MASDFDDLLIGD-SPELRAVVNAARIVAEVDVTVLVHGESGTGKELLARAIHGSSRRSRA  59
            +  +FDD L  +  P+L  V ++   ++++++ VL+ GE+GTGK+ +A+ IH  S R ++
Sbjct  3    LDEGFDDDLDEERVPNLGIVAES---ISQLGIDVLLSGETGTGKDTIAQRIHTISGR-KG  58

Query  60   PMATINCAALPEQLIESELFGHRRGAFTGATGDQPGRIRNAAGGTLFLDEIGEMPLASQA  119
             + ++NCAA+PE L ESELFG   GA+TGA   + G I  A GGTL+LDEI+ MPL+ QA
Sbjct  59   RLVAMNCAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQA  118

Query  120  KLLRFLETGECQAIGQPKPERVDVRVVAATNRDLLAEVREGRFREDLYYRLHVVPLELPP  179
            KLLR LET   + +G     ++DV V+A+++  L   V +G+FR DLY+RL+V+ L+LPP
Sbjct  119  KLLRVLETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPP  178

Query  180  LRERRGDVPILIEHLTRALARQHGLPPPIYQTDALQILARYHWPGNVRELRN  231
            LR +   +  L+ ++  A A++  ++++       Q+L   +WPGN+REL+ 
Sbjct  179  LRTQPERILPLFKRFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKA  230

39) PP4_52350 in NC_021505


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  143 bits (527),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 144/224 (65%), Gaps = 5/224 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F++  +  L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLVSEAAQQVLEAHFWPGNTRELE-----NVIHFALLVNDSE  262
            + + V    QQVL +H WPGN REL      +V+ F++L  D++
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQ  247

40) PputGB1_5223 in NC_010322


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  143 bits (526),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 92/219 (43%), Positives = 141/219 (65%), Gaps = 5/219 (2%)

Query  44   ERLAPQPVPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F++  +  L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLVSEAAQQVLEAHFWPGNTRELE-----NVIHFALL  257
            + + V    QQVL +H WPGN REL      +V+ F++L
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

41) pspF in NC_021066


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  143 bits (527),  Expect = 9e-36, Method: Compositional matrix adjust.
 Identities = 94/234 (41%), Positives = 155/234 (67%), Gaps = 4/234 (1%)

Query  4    YKDNLLGEANSFLEVLEQVSRLAPLDKPVLVIGERGTGKELIANRLHFLSSRWQGPFISL  63
            + D+L  E  + L ++ +   ++ L+  VL+ GE GTGK+ IA+R+H +S+R +G ++++
Sbjct  7    FDDDLDEERVPNLGIVAE--SISQLGIDVLLSGETGTGKDTIAQRIHTISGR-KGRLVAM  63

Query  64   NCAALNENLLDSELFGHEAGAFTGASKRHPGRFERADGGTLFLDELATAPMLVQEKLLRV  123
            NCAA+ E+L +SELFG  +GA+TGA + + G +E A+GGTL+LDE+ + P+ +Q KLLRV
Sbjct  64   NCAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRV  123

Query  124  IEYGELERVGGSQPLQVNVRLVCATNADLPQMVEAGHFRADLLDRLAFDVVQLPPLRDRQ  183
            +E   LER+G++  ++++V ++ ++++ L + VE G FR DL  RL    +QLPPLR + 
Sbjct  124  LETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQP  183

Query  184  SDIMLLANQFAIQMCRELGLPLFPGFSDRARETLLGYRWPGNIRELKNVVERSV  237
              I+ L ++F     +EL ++  ++     ++ LLG  WPGNIRELK    R V
Sbjct  184  ERILPLFKRFMAAAAKELNVA-SADVCPLLQQVLLGHEWPGNIRELKAAAKRHV  236

42) AvCA6_31690 in NC_021150


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/218 (43%), Positives = 143/218 (66%), Gaps = 0/218 (0%)

Query  33   DPRSRKLRDEVERLAPTGLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTW  92
            + R  +L    E ++  G+ VL+ GE+GTGK+ +A++IH  SGR G +VA+NC+A++ + 
Sbjct  13   EERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESL  72

Query  93   AEAELFGHAAGAYAGSACSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRV  152
            AE+ELFG  +GAY+G+  SR G + +A+GGTLYLDEI+ +PL+LQ+KLL  LETR + R+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  153  GTQQPTPVDVRLVAASSVDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEY  212
            G+     +DV ++A++   L +AV  GKF   L   L+   L+LP+LR +P  ILPL   
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  213  FLGVYAQRLGLPLPQLGTAAQFALERYSWPGNTRELES  250
            F++  A+ L ++ +++    Q  L    WPGN REL +
Sbjct  193  FMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKA  230

43) AvCA_31690 in NC_021149


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/218 (43%), Positives = 143/218 (66%), Gaps = 0/218 (0%)

Query  33   DPRSRKLRDEVERLAPTGLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTW  92
            + R  +L    E ++  G+ VL+ GE+GTGK+ +A++IH  SGR G +VA+NC+A++ + 
Sbjct  13   EERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESL  72

Query  93   AEAELFGHAAGAYAGSACSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRV  152
            AE+ELFG  +GAY+G+  SR G + +A+GGTLYLDEI+ +PL+LQ+KLL  LETR + R+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  153  GTQQPTPVDVRLVAASSVDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEY  212
            G+     +DV ++A++   L +AV  GKF   L   L+   L+LP+LR +P  ILPL   
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  213  FLGVYAQRLGLPLPQLGTAAQFALERYSWPGNTRELES  250
            F++  A+ L ++ +++    Q  L    WPGN REL +
Sbjct  193  FMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKA  230

44) Avin_31690 in NC_012560


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/218 (43%), Positives = 143/218 (66%), Gaps = 0/218 (0%)

Query  33   DPRSRKLRDEVERLAPTGLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTW  92
            + R  +L    E ++  G+ VL+ GE+GTGK+ +A++IH  SGR G +VA+NC+A++ + 
Sbjct  13   EERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESL  72

Query  93   AEAELFGHAAGAYAGSACSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRV  152
            AE+ELFG  +GAY+G+  SR G + +A+GGTLYLDEI+ +PL+LQ+KLL  LETR + R+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  153  GTQQPTPVDVRLVAASSVDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEY  212
            G+     +DV ++A++   L +AV  GKF   L   L+   L+LP+LR +P  ILPL   
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  213  FLGVYAQRLGLPLPQLGTAAQFALERYSWPGNTRELES  250
            F++  A+ L ++ +++    Q  L    WPGN REL +
Sbjct  193  FMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKA  230

45) PPS_5018 in NC_015733


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 92/219 (43%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  44   EHLAPQPLPVLIRGETGTGKELLARQIHRASDRSGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  SQGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGTLELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   TL+LPPLR +P  ILPL   F++  +  L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLVSEAAQQALEAHPWPGNTRELE-----NVIHFALL  257
            + + V    QQ L +H WPGN REL      +V+ F++L
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

46) B479_25340 in NC_019905


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 141/219 (65%), Gaps = 5/219 (2%)

Query  44   EHLAPQSLPVLIRGETGTGKELLARQIHRASDRSGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++  ++ VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  SQGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F++  +  L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLVSEAAQQALEAHPWPGNTRELE-----NVIHFALL  257
            + + V    QQ L +H WPGN REL      +V+ F++L
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

47) G655_05020 in NC_020912


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  142 bits (522),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 101/236 (43%), Positives = 153/236 (65%), Gaps = 11/236 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI+ +PL+LQA+LL+ LE R + R+G+   I  DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFMGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR +P  ILPL   FM+  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSDKEEILPQHLNFG  270
            +++ + +    Q+VL +  WPGNIREL      +V+ F++L  D +    +HL  G
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--EEHLACG  255

48) PPUBIRD1_4959 in NC_017530


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 141/224 (63%), Gaps = 5/224 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFAGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F +  +  L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLVSEAAQRVLEGHFWPGNTRELE-----NVIHFALLVNDGE  262
            + + V    Q+VL GH WPGN REL      +V+ F++L  D +
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQ  247

49) PP_5166 in NC_002947


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  141 bits (519),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 141/224 (63%), Gaps = 5/224 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFAGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F +  +  L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLVSEAAQRVLEGHFWPGNTRELE-----NVIHFALLVNDGE  262
            + + V    Q+VL GH WPGN REL      +V+ F++L  D +
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQ  247

50) flbD in NC_018220


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 91/219 (42%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  THGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F++  +  L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLVSEAAQRVLEAHFWPGNTRELE-----NVIHFALL  257
            + + V    Q+VL +H WPGN REL      +V+ F++L
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

51) PputW619_0299 in NC_010501


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 143/224 (64%), Gaps = 5/224 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLARVVKAGRFNERLYQYLHEGALELPPLRERCGDILPLAEYFVGIYCARLQR  223
            ++A++   L   V  G+F   LY  L+  +L+LPPLR +   ILPL   F++     L+ 
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLISEAAQQVLEAHTWPGNTRELE-----NIIHFALLVNDSE  262
            + + +    QQVL +H WPGN REL      +++ F++L  D++
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQ  247

52) Sala_0205 in NC_008048


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  140 bits (514),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 97/240 (41%), Positives = 153/240 (64%), Gaps = 10/240 (4%)

Query  27   LDRPVLVIGERGTGKELIAERLHRLSTRWDRPYVIMNCAAMPETLIESELFGHEAGAFTG  86
            L+  VL+ GE GTGK+ IA+R+H +S R +R  V MNCAA+PE+L ESELFG  +GA+TG
Sbjct  29   LGIDVLLSGETGTGKDTIAQRIHTISGRKGR-LVAMNCAAIPESLAESELFGVVSGAYTG  87

Query  87   ATRSRAGRFEEADGGTLFLDELATMSMGAQERLLRAVEYGEITRVGASRPIRVDVRIVAA  146
            A RSR G +E A+GGTL+LDE+ +M+++ Q +LLR +E   + R+G++  I++DV ++A+
Sbjct  88   ADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIAS  147

Query  147  TNEHLPALVEENRFRADLLDRLSFEVITLPPLRAREGDIEVLATYFGQRMAAVVGWD---  203
            ++  L   VE+ +FR DL  RL+   + LPPLR++   I  L+ +  +R  A  + +   
Sbjct  148  AQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERI--LPLF--KRFMAAAAKELNV  203

Query  204  EWPGFGPRALAAMEGHDWPGNVRELRNVIERAVYRWGDPTKPIDALSFDPFASPWQPTVR  263
              ++  P     + GH+WPGN+REL+    R V   G P   +D+ S + +A   ++ +R
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHV--LGFPVLGVDPQSEEHLACGLKSQLR  261

53) PLES_10441 in NC_011770


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  140 bits (515),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 100/236 (43%), Positives = 152/236 (65%), Gaps = 11/236 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFIGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR +P  ILPL   F++  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSDKEEILPQHLNFG  270
            +++ + +    Q+VL +  WPGNIREL      +V+ F++L  D +    +HL  G
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--EEHLACG  255

54) NCGM2_5127 in NC_017549


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  140 bits (516),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 100/236 (43%), Positives = 153/236 (65%), Gaps = 11/236 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI+ +PL+LQA+LL+ LE R + R+G+   I  DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFIGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR +P  ILPL   F++  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSDKEEILPQHLNFG  270
            +++ + +    Q+VL +  WPGNIREL      +V+ F++L  D +    +HL  G
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--EEHLACG  255

55) PA14_13000 in NC_008463


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  140 bits (516),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 100/236 (43%), Positives = 153/236 (65%), Gaps = 11/236 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI+ +PL+LQA+LL+ LE R + R+G+   I  DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFIGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR +P  ILPL   F++  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSDKEEILPQHLNFG  270
            +++ + +    Q+VL +  WPGNIREL      +V+ F++L  D +    +HL  G
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--EEHLACG  255

56) M062_20795 in NC_021577


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  140 bits (515),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 100/236 (43%), Positives = 152/236 (65%), Gaps = 11/236 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFVGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR +P  ILPL   F++  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSDKEEILPQHLNFG  270
            +++ + +    Q+VL +  WPGNIREL      +V+ F++L  D +    +HL  G
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--EEHLACG  255

57) PA3932 in NC_002516


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  140 bits (515),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 99/236 (42%), Positives = 152/236 (65%), Gaps = 11/236 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  102  THNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            +  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFIGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR +P  ILPL   F++  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSDKEEILPQHLNFG  270
            +++ + +    Q+VL +  WPGNIREL      +V+ F++L  D +    +HL  G
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--EEHLACG  255

58) PAM18_1008 in NC_017548


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  140 bits (514),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 100/236 (43%), Positives = 152/236 (65%), Gaps = 11/236 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFVGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR +P  ILPL   F++  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  220  DLPVPTIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSDKEEILPQHLNFG  270
            +++ + +    Q+VL +  WPGNIREL      +V+ F++L  D +    +HL  G
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--EEHLACG  255

59) PADK2_04665 in NC_018080


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  140 bits (514),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 99/236 (42%), Positives = 152/236 (65%), Gaps = 11/236 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFVGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR +P  ILPL   F++  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  220  DLPVPAIGVETQRILESYPWPGNIRELE-----NVVHFALLVSDKEEILPQHLNFG  270
            +++ + +    Q++L +  WPGNIREL      +V+ F++L  D +    +HL  G
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS--EEHLACG  255

60) MDS_4670 in NC_015410


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 100/242 (42%), Positives = 154/242 (64%), Gaps = 7/242 (2%)

Query  32   DARSRQLRERAEALADNGLPLLILGETGTGKELLARYIHRQSERAGLFVAVSCAAISPQW  91
            + R  +L   AE++++ G+ +L+ GETGTGK+ +A+ IH  S R G +VA++CAAI+   
Sbjct  13   EERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESL  72

Query  92   GEAELFGHLGGAHVGAASSRAGWFGSANGGTLYLDEIADLSRTLQSKLLAALETREVYRV  151
            +E+ELFG ++GA  GA  SR G + +A+GGTLYLDEI  ++ +LQ+KLL  LETR + R+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  152  GASQALPVDVRLVAASSIDLARAVAAGTFDERLYAYLCDGQLRFPALRERVGDILPLAEY  211
            G++ ++ +DV ++A++   L  AV  G F   LY  L    L++P+LR +   ILPL   
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  212  FLGIHASRLDLAIPPISPAAQAVLESHRWPGNTRELE-----NVIHFALLLAGNAEIGPE  266
            F++  A  L++A + + P  Q VL +H WPGN REL      +V+ F++L  G    + E
Sbjct  193  FMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL--GVDPQSEE  250

Query  267  HL  268
            HL
Sbjct  251  HL  252

61) YSA_04462 in NC_017986


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 90/212 (43%), Positives = 137/212 (65%), Gaps = 5/212 (2%)

Query  51   LPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAGTHGGTAS  110
            + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G+  G+  
Sbjct  31   IDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGADR  90

Query  111  SRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            SR G + +A GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV ++A++  
Sbjct  91   SRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASAQS  150

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQRPLPLVSE  230
             L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F++  +  L+ + + V  
Sbjct  151  SLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNVASADVCP  210

Query  231  AAQRVLEAHFWPGNTRELE-----NVIHFALL  257
              Q+VL +H WPGN REL      +V+ F++L
Sbjct  211  LLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

62) Pput_5073 in NC_009512


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 90/212 (43%), Positives = 137/212 (65%), Gaps = 5/212 (2%)

Query  51   LPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAGTHGGTAS  110
            + VL+ GETGTGK+ +A++IH  S+R G +V++NCAAI+ + A++ELFG  +G+  G+  
Sbjct  31   IDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGADR  90

Query  111  SRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            SR G + +A GGTLYLDEI  +PL++Q+KLL  LE R + R+G+     +DV ++A++  
Sbjct  91   SRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCVIASAQS  150

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQRPLPLVSE  230
             L   V  G+F   LY  L   +L+LPPLR +P  ILPL   F++  +  L+ + + V  
Sbjct  151  SLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNVASADVCP  210

Query  231  AAQRVLEAHFWPGNTRELE-----NVIHFALL  257
              Q+VL +H WPGN REL      +V+ F++L
Sbjct  211  LLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

63) M892_03825 in NC_022269


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  136 bits (500),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 99/241 (42%), Positives = 158/241 (66%), Gaps = 8/241 (3%)

Query  10   PAFLAVLDKVSQLAPIERPVLIIGERGTGKELIAQRLHYLSKRWDKPLLSLNCATLSEGL  69
            P +  V + +SQL+ I+  VL+ GE GTGK+ IAQR+H +S R ++ L+++NCA+++E+L
Sbjct  17   PNLGIVAESISQLG-ID--VLLSGETGTGKDTIAQRIHTISGRKGR-LVAMNCAAIPESL  72

Query  70   IDSELFGHESGSFTGSKGKHKGRFERAEGGTLFLDELATAPLLVQEKLLRVIEYGEYERV  129
             +SELFG  SG++TG+   + G +E A+GGTL+LDE+ + PL +Q KLLRV+E    ER+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  130  GGHTALTADVRLVCATNADLPKLAEQGDFRADLLDRLAFDVIMLPPLRERKEDILSLAEH  189
            G+ +++  DV ++ ++++ L    EQG FR DL  RL    + LPPLR + E IL+L  +
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  190  YAIKMCRELQLEYFVGFTEEAQQSLLDYEWPGNVRELKNVIERAI--YRH-GLNSDPIEH  246
            +     +EL++    +     QQ LL+ EWPGN+RELK    R +  +   G+++++ EH
Sbjct  193  FMAAAAKELNVAS-ADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEH  251

Query  247  L  247
            L
Sbjct  252  L  252

64) pspF in NC_012582


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  135 bits (494),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 157/242 (65%), Gaps = 8/242 (3%)

Query  10   PAFLAVLDKVSRLAPIDRPVLIIGERGTGKELIAQRLHYLSKRWEQPLVSLNCSTLSEGL  69
            P +  V + +S+L+ ID  VL+ GE GTGK+ IAQR+H +S R  + LV++NC++++E+L
Sbjct  17   PNLGIVAESISQLG-ID--VLLSGETGTGKDTIAQRIHTISGRKGR-LVAMNCAAIPESL  72

Query  70   IDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYGQYERV  129
             +SELFG  SG++TGA   + G +E A+GGTL+LDE+ + PLS+Q KLLRV+E    ER+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  130  GGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIALLAEH  189
            G+   ++ +V ++ +++++L +  +QG FR DL  RL    ++LP+LR +PE I  L  +
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  190  FAIRMCRELQVPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQ---HGLNSQPIEQ  246
            F     +EL+V+   +  P   + L +  WPGN+RELK    R V      G+++Q+ E+
Sbjct  193  FMAAAAKELNVA-SADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEH  251

Query  247  LV  248
            L 
Sbjct  252  LA  253

65) pspF in NC_009457


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  135 bits (494),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 98/242 (41%), Positives = 157/242 (65%), Gaps = 8/242 (3%)

Query  10   PAFLAVLDKVSRLAPIDRPVLIIGERGTGKELIAQRLHYLSKRWEQPLVSLNCSTLSEGL  69
            P +  V + +S+L+ ID  VL+ GE GTGK+ IAQR+H +S R  + LV++NC++++E+L
Sbjct  17   PNLGIVAESISQLG-ID--VLLSGETGTGKDTIAQRIHTISGRKGR-LVAMNCAAIPESL  72

Query  70   IDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYGQYERV  129
             +SELFG  SG++TGA   + G +E A+GGTL+LDE+ + PLS+Q KLLRV+E    ER+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  130  GGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIALLAEH  189
            G+   ++ +V ++ +++++L +  +QG FR DL  RL    ++LP+LR +PE I  L  +
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  190  FAIRMCRELQVPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQ---HGLNSQPIEQ  246
            F     +EL+V+   +  P   + L +  WPGN+RELK    R V      G+++Q+ E+
Sbjct  193  FMAAAAKELNVA-SADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEH  251

Query  247  LV  248
            L 
Sbjct  252  LA  253

66) PCA10_01930 in NC_021499


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  134 bits (491),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 97/221 (44%), Positives = 147/221 (67%), Gaps = 0/221 (0%)

Query  32   DERSRRLREEVDQLAPGDLPVLIQGETGTGKELLARQIHRSSDRPGLFVAVSCSAISKSY  91
            +ER   L    + ++  ++ VL+ GETGTGK+ +A++IH  S+R G +VA++C+AI+ S 
Sbjct  13   EERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESL  72

Query  92   AEAELFGHTPGAYNGAASSRAGWFGSANGGTLYLDEIGDlplplqakllaalESREVTRV  151
            AE+ELFG  +GAY GA  SR G + +A+GGTLYLDEI+ +PL+LQAKLL  LE+R + R+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  152  GAQQPTPVDVRLVAATSIDLAEAVRVGKFNARLYQYLNEGRVELPPLRERPDDILPLAEY  211
            G+     +DV ++A++   L +AV  GKF   LY  LN   ++LPPLR +P+ ILPL   
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  212  FLGIYAQRLDLPLPLISAAAQAVLEAYPWPGNTRELENSVH  252
            F++  A+ L+++ + + +  Q VL +  WPGN REL  +  
Sbjct  193  FMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAK  233

67) Pfl01_0222 in NC_007492


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  130 bits (478),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 92/222 (42%), Positives = 150/222 (68%), Gaps = 8/222 (3%)

Query  40   EEMAQLAPRSISVLIRGETGTGKELLARHIHRASDRSGLFVSVNCGAISPTYADAELFgy  99
            E ++QL+   I VL+ GETGTGK+ +A++IH  S+R G +V++NC+AI+ + A++ELFG 
Sbjct  24   ESISQLG---IDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGV  80

Query  100  aagsysgsassragWFGSANGGTLYLDEIGDLPLPIQIKLLSALENHEVTRVGAHQPSPV  159
             +G+Y+G+  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +
Sbjct  81   VSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKL  140

Query  160  DVRLVAATSIDLAQAVAAGKFHERLYHYLSEGHLELPALRARVGDILSLAEYFLGIYSQR  219
            DV ++A++   L +AV  GKF+  LY  L+   L+LP+LR++   IL+L   F++  ++ 
Sbjct  141  DVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKE  200

Query  220  LDLPVPLISEAAQQVLEQHSWPGNTRELE-----NVIHFALL  256
            L+++ + +    QQVL  H WPGN REL      +V+ F++L
Sbjct  201  LNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

68) GU3_07590 in NC_016745


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  129 bits (471),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 155/231 (68%), Gaps = 4/231 (1%)

Query  2    DSELLGQSNPLLGVLDEVSRLAPLDRPVLVVGERGTGKELVAHRLHYLSTRWQQPFVSIN  61
            D +L  +  P LG++ E   ++ L+  VL+ GE GTGK+ +A+R+H +S R +  +V++N
Sbjct  8    DDDLDEERVPNLGIVAE--SISQLGIDVLLSGETGTGKDTIAQRIHTISGR-KGRLVAMN  64

Query  62   CATLAeslleselFGHEAGAFTGAQKRHAGRFERADGGTLFLDELATTSPRVQEKLLRVI  121
            CA+++ESL ESELFG  +GA+TGA++ + G +E A+GGTL+LDE+ + +  +Q KLLRV+
Sbjct  65   CAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVL  124

Query  122  EYGEFERVGGSLPVRVDVRLLCATNQDLPGLVNKGEFRADLLDRLAFDVITLPPLRARED  181
            E   +ER+G++  +++DV ++ +++  L + V++G FR DL  RL    + LPPLR++ +
Sbjct  125  ETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPE  184

Query  182  DVLQLAEHFAVKWSAELGRPLFAGFTPEARRQLLAHPWPGNVRELKNTVER  232
             +L L  +F    + EL  +  A+  P  ++ LL+H WPGN+RELK +  R
Sbjct  185  RILPLFKRFMAAAAKELNVA-SADVCPLLQQVLLGHEWPGNIRELKAAAKR  234

69) Nwat_2550 in NC_014315


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  129 bits (471),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 91/227 (41%), Positives = 149/227 (66%), Gaps = 6/227 (2%)

Query  24   VAATEVTALIIGETGTGKELLAQAIHAESQRankafaaincaaLPEGLAESELFGHRRGA  83
            ++   +  L+ GETGTGK+ +AQ IH+ S R  +  A    A +PE+LAESELFG   GA
Sbjct  26   ISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAA-IPESLAESELFGVVSGA  84

Query  84   FSGAIHDHLGRFRAAEGGTVFLDEVNELSPAIQAKLLRFLESGECQAIGDTRVQHCDVRV  143
            ++GA + ++G + AA+GGT++LDE++ ++ ++QAKLLR LE+   + +G T     DV V
Sbjct  85   YTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCV  144

Query  144  IAATNCNLNQRIQEGRFRQDLYYRLHVVPLEIPPLRAREGDIHRLLKHFCAVFAQHHHGL  203
            IA+++ +L++ +++G+FR+DLY+RL+V+ L++PPLR++   I  L+K+F    A     L
Sbjct  145  IASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRF---MAAAAKEL  201

Query  204  TPAGFNAAAL--RVLNLYSWPGNVRELRNFCERMMVLLPGQIVTPQN  248
              A+ +  +L  +VL    WPGN+REL+    R ++ +P   V PQ+
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQS  248

70) PFLU0214 in NC_012660


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 147/219 (68%), Gaps = 5/219 (2%)

Query  44   ESLAPRALPVLIRGETGSGKELLARHIHRGSDRTGLFVSVNCGAISPTYADAELFGYaag  103
            ES++  ++ VL+ GETG+GK+ +A++IH  S+R G +V++NC+AI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  ahsgaassragWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPVDVR  163
            A +GA  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLAQAVAAGKFHERLFHYLSEGQLDLPALRERVGDILSLAEYFLGIYSQRLDL  223
            ++A++   L +AV  GKF+  L+  L+   L+LP+LR +   IL+L   F++  ++ L++
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLISDAAQRVLEHHTWPGNTRELE-----NVIHFALL  257
            + + +    Q+VL  H WPGN REL      +V+ F++L
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

71) PflA506_0225 in NC_017911


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  124 bits (455),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 88/219 (41%), Positives = 147/219 (68%), Gaps = 5/219 (2%)

Query  44   ESLAPRALPVLIRGETGSGKELLARHIHRGSDRTGLFVSVNCGAISPTYADAELFgyaag  103
            ES++  ++ VL+ GETG+GK+ +A++IH  S+R G +V++NC+AI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  104  shsgaassragWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPVDVR  163
            + +GA  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  164  LVAATSIDLAQAVAVGKFHERLFHYLSEGRLDLPALRERVGDILSLAEYFLGIYSQRLDL  223
            ++A++   L +AV  GKF+  L+  L+   L+LP+LR +   IL+L   F++  ++ L++
Sbjct  144  VIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNV  203

Query  224  PVPLISDAAQQVLEHHTWPGNTRELE-----NVIHFALL  257
            + + +    QQVL  H WPGN REL      +V+ F++L
Sbjct  204  ASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL  242

72) H681_21380 in NC_020829


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  124 bits (454),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 101/235 (43%), Positives = 153/235 (66%), Gaps = 13/235 (5%)

Query  43   ERLAPLPQPVLIHGETGTGKELLARHIHRASERPGLFVAVSCGALSRNYAETELFGYAPG  102
            E ++ L   VL+ GETGTGK+ +A++IH  S R G +VA++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAESELFGVVSG  83

Query  103  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLSLQQKllrvlqerevlrvGAREPVPVDVR  162
            A  G+  SR G + +A+GGTLYLDEI  +PLSLQ KLLRVL+ R + R+G+   + +DV 
Sbjct  84   AYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVC  143

Query  163  LVAATSVDLGQAVKAGKFLEGLKQY--LHDGNLTLPPLRERIGDIQPLAEYFLGVHAQRL  220
            ++A++   L++AV  GKF  +L  Y  L+   L LPPLR +   I PL   F++  A+ L
Sbjct  144  VIASAQSSLDDAVEQGKFRRDL--YFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  221  ELPVPQIAGDTQRVLESYPWPGNIRELE-----NVIHFALL-VSPDEEIRPEHLN  269
            +++ +++    Q+VL +  WPGNIREL      +V+ F++L V P+ E   EHL 
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSE---EHLA  253

73) Plabr_2798 in NC_015174


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  123 bits (448),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 106/264 (41%), Positives = 169/264 (65%), Gaps = 8/264 (3%)

Query  30   VARSSATVLLLGETGTGKEMIARAIHELSPRGSGPYIRVNCGAlseslleselFGHVKGA  89
            +++ +  VLL GETGTGK+ IA+ IH +S R  G  + +NC+A++ESL ESELFG V GA
Sbjct  26   ISQLGIDVLLSGETGTGKDTIAQRIHTISGR-KGRLVAMNCAAIPESLAESELFGVVSGA  84

Query  90   FTSAVENRTGRFEAAHGGTIFLDEINSMSFPLQVKLLRVLQEQEFERVGDTRTISVDTRI  149
            +T+A  +R G +EAA+GGT++LDEI+SM+++LQ KLLRVL+ + +ER+G T TI +D  +
Sbjct  85   YTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDVCV  144

Query  150  VAATNRDLLDEVEAGEFREDLYYRLNVCPIFlpplrdrptdlpelADHFIKKYARENDFQ  209
            +A+++  L D VE G FR DLY+RLNV  + LPPLR +P  +  L  +F+   A+E +  
Sbjct  145  IASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKELNVA  204

Query  210  PLQMQEETMKLLQQYGWPGNVRELENYVERAI----VMATTGKFSPDL---LPPHVRGMT  262
            + ++     ++L    WPGN+REL     R +    V++   +   +L   L +++R++ 
Sbjct  205  SADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLACGLKSQLRAIE  264

Query  263  PVRLGMSKKKDLESISEELVSLGM  286
               +  S K++ + I    + L+M
Sbjct  265  KALIQQSLKRHRNCIDAASLELDM  288

74) MU9_2373 in NC_020418


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  118 bits (432),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 95/236 (41%), Positives = 152/236 (65%), Gaps = 11/236 (4%)

Query  9    IGIDNTFLDAL--EKVSRLAKIARP-------VLICGERGTGKELFAHRLHYLSPRWDEP  59
            +++D+ F D L  E+V+ L+ +A +       VL+ GE GTGK+ +A+R+H +S R    
Sbjct  1    MDLDEGFDDDLDEERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGR-KGR  59

Query  60   FIalncaalndnlldSELFGHESGAFTGAQRRHQGRFERADGGTLFLDELGTAPLTVQEK  119
            ++A+NCAA+ ++L +SELFG  SGA+TGA+R + G +E A+GGTL+LDE+++ PL++Q K
Sbjct  60   LVAMNCAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAK  119

Query  120  LLRVIEYGEFERVGGQQTLKADVRIVCATNADLPALAAEGKFRPDLLDRLAFDVVNIPPL  179
            LLRV+E   +ER+G+  T+K DV ++ ++++ L     +GKFR DL  RL    +++PPL
Sbjct  120  LLRVLETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPL  179

Query  180  RERPRDLTELAGHFAVQMCQEMGTPFFAGFSPHALQQMQNYHWPGNIRELKNVIER  235
            R +P  +  L  +F     +E+  +  A+  P   Q +   +WPGNIRELK    R
Sbjct  180  RTQPERILPLFKRFMAAAAKELNVA-SADVCPLLQQVLLGHEWPGNIRELKAAAKR  234

75) AnaeK_2390 in NC_011145


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  113 bits (411),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 103/243 (43%), Positives = 151/243 (63%), Gaps = 5/243 (2%)

Query  17   EADLVAASAPMRRLVAEVARVAPRDVTVLLRGETGTGKErvasllharsrraaGPLVRCN  76
            + DL     P   +VAE   ++  ++ VLL GETGTGK+ +A  +H+ S R  G LV  N
Sbjct  8    DDDLDEERVPNLGIVAE--SISQLGIDVLLSGETGTGKDTIAQRIHTISGRK-GRLVAMN  64

Query  77   CaaipaalaeaelfgaargaYTGAVEARRGFFSAADGGTLVLDEIGELPHALQPKLLRAL  136
            CAAIP +LAE+ELFG   GAYTGA  +R G++ AA+GGTL LDEI+ +P +LQ+KLLR L
Sbjct  65   CAAIPESLAESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVL  124

Query  137  QEGELQPVGAGRIERVDVRVVACTNRDLAAEVRAGRFREDLYYRLAVVELVVPPLRDRRE  196
            +   L+ +G+    ++DV V+A ++  L   V  G+FR DLY+RL V+ L +PPLR + E
Sbjct  125  ETRALERLGSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPE  184

Query  197  DVPalaavlarrlgarFGVAPVRLSPALVERLAAADWPGNVRQLENAIARMIALAPGPVL  256
             + +L   +    +  + VA+  + P L + L + +WPGN+R+L  A  R +     PVL
Sbjct  185  RILPLFKRFMAAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHV--LGFPVL  242

Query  257  GPE  259
            G +
Sbjct  243  GVD  245

76) Anae109_1687 in NC_009675


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  110 bits (399),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 107/244 (44%), Positives = 167/244 (69%), Gaps = 10/244 (4%)

Query  45   AHDFADSDAPVVILGESGTGKEVVARALHAASPRGARPFVPVNVaalpaelleselFGHV  104
            A+ +++ +  V++ GE+GTGK+ +A+ +H+ S R +R +V++N AA+P  L ESELFG V
Sbjct  23   AESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGR-LVAMNCAAIPESLAESELFGVV  81

Query  105  RGAFTGATGDKQGLLEAADGGTLFLDEIAEMPLALQAKLLRALEDGEIRRVGDTRSFGVD  164
             GA+TGA   + G +EAA+GGTL+LDEI  MPL+LQAKLLR LE   + R+G T ++ +D
Sbjct  82   SGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLD  141

Query  165  VRFVCATHRDLAQRVTAGQFREDlyyrlkvlvlrlpplrerveDILPLARQFLAAERR--  222
            V  + +++  L + V  G+FR DLY+RL+VL L+LPPLR + E ILPL ++F+AA  +  
Sbjct  142  VCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKRFMAAAAKEL  201

Query  223  --PAAGLSAEAEERLLAHPWPGNVRELQ-NVMRHA---AVLARGAEVRPEHLPEELQRPA  276
              ++A++ +  ++ LL+H WPGN+REL+    RH    +VL+ +++   EHL+  L+   
Sbjct  202  NVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQ-SEEHLACGLKSQL  260

Query  277  RRAE  280
            R  E
Sbjct  261  RAIE  264

77) Pmen_4342 in NC_009439


> AF069650|2|G2|3603313|AAC35800.1|Pseudomonas_syringae_Race_4|+|978..1886|hrpS|-|transcriptional 
regulator
Length=302

 Score =  110 bits (402),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 101/244 (42%), Positives = 148/244 (61%), Gaps = 9/244 (3%)

Query  32   DPRSRQLRERAEVLAGNGQPLLILGETGTGKELLARYIHRQSERGGLFVALSCAAISPQW  91
            + R  +L   AE ++  G  +L+ GETGTGK+ +A+ IH  S R G +VA++CAAI+   
Sbjct  13   EERVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESL  72

Query  92   GEAELFghvggahvgaassragWFGSANGGTLYLDEIADLSRPLQSKLLAALETREVYRV  151
            +E+ELFG V+GA  GA  SR G + +A+GGTLYLDEI  ++ +LQ+KLL  LETR + R+
Sbjct  73   AESELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERL  132

Query  152  GASQALPADVRLVAASSIDLARAVAAGTFDERLYAYLCDGQLLFPALRQRVGDILPLAEY  211
            G++ ++  DV ++A++   L  AV  G F   LY  L    L +P+LR +   ILPL   
Sbjct  133  GSTSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVLTLQLPPLRTQPERILPLFKR  192

Query  212  FLGIHASRLGLGLAVPPISPAAQAVLEAHRWPGNTRELE-----NVIHFALLLAGNAEIG  266
            F++  A    L +A + + P  Q VL +H WPGN REL      +V+ F++L  G    +
Sbjct  193  FMAAAAK--ELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVL--GVDPQS  248

Query  267  PEHL  270
             EHL
Sbjct  249  EEHL  252