Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
DNA-binding helix-turn-helix protein |
NC_013895 (Clostridiales genomosp. UPII9-5) |
6e-50 |
100 |
|
transcriptional regulator |
NC_018608 (Staphylococcus aureus 08BA02176) |
6e-50 |
100 |
|
transcriptional regulator, putative |
NC_017333 (Staphylococcus aureus ST398) |
6e-50 |
100 |
|
Tn916-associated transcriptional regulator |
NC_014925 (Staphylococcus pseudintermedius HKU10-03) |
6e-50 |
100 |
|
FIG00630611: hypothetical protein |
NC_021485 (Streptococcus agalactiae 09mas018883) |
6e-50 |
100 |
|
Tn916, transcriptional regulator |
NC_004116 (Streptococcus agalactiae 2603V/R) |
6e-50 |
100 |
|
FIG00630611: hypothetical protein |
NC_021507 (Streptococcus agalactiae ILRI112) |
6e-50 |
100 |
|
putative transcriptional regulator protein |
NC_022239 (Streptococcus anginosus C238) |
6e-50 |
100 |
|
putative transcriptional regulator protein |
NC_022238 (Streptococcus constellatus C1050) |
6e-50 |
100 |
|
Tn916 ORF9 transcriptional regulator, putative |
NC_017576 (Streptococcus gallolyticus ATCC 43143) |
6e-50 |
100 |
|
transcriptional regulator (Tn916) |
NC_013798 (Streptococcus gallolyticus UCN34) |
6e-50 |
100 |
|
putative transcriptional regulator protein |
NC_022237 (Streptococcus intermedius C270) |
6e-50 |
100 |
|
transcriptional regulator, putative |
NC_021900 (Streptococcus lutetiensis 033) |
6e-50 |
100 |
|
transcriptional regulator |
NC_021175 (Streptococcus oligofermentans AS 1.3089) |
6e-50 |
100 |
|
transcriptional regulator |
NC_014498 (Streptococcus pneumoniae 670-6B) |
6e-50 |
100 |
|
conjugative transposon regulatory protein |
NC_011900 (Streptococcus pneumoniae ATCC 700669) |
6e-50 |
100 |
|
transcriptional regulator |
NC_010380 (Streptococcus pneumoniae Hungary19A-6) |
6e-50 |
100 |
|
transcriptional regulator, putative |
NC_012467 (Streptococcus pneumoniae P1031) |
6e-50 |
100 |
|
transcriptional regulator |
NC_017769 (Streptococcus pneumoniae ST556) |
6e-50 |
100 |
|
transcriptional regulator, putative |
NC_012469 (Streptococcus pneumoniae Taiwan19F-14) |
6e-50 |
100 |
|
Tn916 transcriptional regulator |
NC_014251 (Streptococcus pneumoniae TCH8431/19A) |
6e-50 |
100 |
|
Tn916, transcriptional regulator |
NC_009442 (Streptococcus suis 05ZYH33) |
6e-50 |
100 |
|
Tn916, transcriptional regulator |
NC_009443 (Streptococcus suis 98HAH33) |
6e-50 |
100 |
|
DNA-binding protein |
NC_012926 (Streptococcus suis BM407) |
6e-50 |
100 |
|
DNA-binding protein |
NC_012924 (Streptococcus suis SC84) |
6e-50 |
100 |
|
hypothetical protein |
NC_021213 (Streptococcus suis TL13) |
6e-50 |
100 |
|
helix-turn-helix protein |
NC_021994 (Enterococcus faecium AUS0085) |
1e-49 |
99 |
|
helix-turn-helix domain-containing protein |
NC_017022 (Enterococcus faecium Aus0004) |
4e-47 |
89 |
|
putative HTH-type transcriptional regulator |
NC_021670 (Staphylococcus aureus Bmb9393) |
4e-47 |
89 |
|
putative transcriptional regulator |
NC_017341 (Staphylococcus aureus JKD6008) |
4e-47 |
89 |
|
hypothetical protein |
NC_009782 (Staphylococcus aureus Mu3) |
4e-47 |
89 |
|
transcriptional regulator |
NC_002758 (Staphylococcus aureus Mu50) |
4e-47 |
89 |
|
Transcriptional regulator, Tn916 |
NC_017347 (Staphylococcus aureus T0131) |
4e-47 |
89 |
|
putative DNA-binding protein |
NC_017331 (Staphylococcus aureus TW20) |
4e-47 |
89 |
|
transcriptional regulator |
NC_017568 (Staphylococcus pseudintermedius ED99) |
4e-47 |
89 |
|
transcriptional regulator, Tn916 |
NC_013853 (Streptococcus mitis B6) |
4e-47 |
89 |
|
Helix-turn-helix. |
NC_021016 (butyrate-producing bacterium SSC/2) |
3e-40 |
75 |
|
Helix-turn-helix. |
NC_021022 ([Ruminococcus] obeum A2-162) |
3e-39 |
74 |
|
Helix-turn-helix. |
NC_021035 (butyrate-producing bacterium SS3/4) |
4e-38 |
75 |
|
HTH-type transcriptional regulator |
NC_009089 (Clostridium difficile 630) |
4e-38 |
75 |
|
HTH-type transcriptional regulator |
NC_009089 (Clostridium difficile 630) |
6e-37 |
88 |
|
transcriptional regulator |
NC_016630 (Filifactor alocis ATCC 35896) |
4e-36 |
88 |
|
Predicted transcription factor, homolog of eukaryotic MBF1 |
NC_021015 ([Ruminococcus] torques L2-14) |
2e-27 |
50 |
|
Predicted transcriptional regulators |
NC_021018 (Coprococcus sp. ART55/1) |
1e-21 |
49 |
|
Helix-turn-helix. |
NC_021043 (Eubacterium siraeum V10Sc8a) |
6e-20 |
50 |
|
Helix-turn-helix. |
NC_021013 (Ruminococcus bromii L2-63) |
6e-20 |
50 |
|
Helix-turn-helix. |
NC_021035 (butyrate-producing bacterium SS3/4) |
5e-18 |
47 |
|
HTH-type transcriptional regulator |
NC_009089 (Clostridium difficile 630) |
7e-17 |
43 |
|
Helix-turn-helix. |
NC_021040 (Roseburia intestinalis M50/1) |
2e-16 |
43 |
|
Helix-turn-helix. |
NC_021013 (Ruminococcus bromii L2-63) |
3e-16 |
44 |
|
HTH-type transcriptional regulator |
NC_009089 (Clostridium difficile 630) |
7e-16 |
44 |
|
Helix-turn-helix. |
NC_021047 (Clostridium saccharolyticum K10) |
2e-15 |
41 |
|
Helix-turn-helix. |
NC_021022 ([Ruminococcus] obeum A2-162) |
2e-15 |
41 |
|
Predicted transcriptional regulators |
NC_021022 ([Ruminococcus] obeum A2-162) |
2e-12 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_009443_P1' AND ph.id_pai_orf='19' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc