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PAthogenisity Island DataBase (PAI DB)

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Homologs of papI gene of NC_008563_P4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) papI
( YP_854258.1 )

fimbrial regulatory protein

NC_008563
(Escherichia coli APEC O1)

5e-24

100

2) ECP_4543
( YP_672380.1 )

hypothetical protein

NC_008253
(Escherichia coli 536)

6e-23

• Sequence Alignments

1) papI in NC_008563


> NC_008563_P4|19|G18|117625211|YP_854258.1|Escherichia_coli_APEC_O1|-|19716..20021|papI|APECO1_3517|fimbrial 
regulatory protein
Length=101

 Score =  104 bits (377),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 101/101 (100%), Positives = 101/101 (100%), Gaps = 0/101 (0%)

Query  1    MLPCPVLMVSAEPYLLFPVITGnsgpgnplppappqflpfsLHHACSEIPVFHSSYIHSS  60
            MLPCPVLMVSAEPYLLFPVITGNSGPGNPLPPAPPQFLPFSLHHACSEIPVFHSSYIHSS
Sbjct  1    MLPCPVLMVSAEPYLLFPVITGNSGPGNPLPPAPPQFLPFSLHHACSEIPVFHSSYIHSS  60

Query  61   HCNKVSSNNKNHAFCYQRKGIFILcvccvccvccvcFICAI  101
            HCNKVSSNNKNHAFCYQRKGIFILCVCCVCCVCCVCFICAI
Sbjct  61   HCNKVSSNNKNHAFCYQRKGIFILCVCCVCCVCCVCFICAI  101

2) ECP_4543 in NC_008253


> NC_008563_P4|19|G18|117625211|YP_854258.1|Escherichia_coli_APEC_O1|-|19716..20021|papI|APECO1_3517|fimbrial 
regulatory protein
Length=101

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 74/84 (89%), Positives = 77/84 (92%), Gaps = 0/84 (0%)

Query  1   MLPCLALMESAEPHLLFPVITGNSVPDNPLPPAPPQFLRFSLHYACSEIPVFHSSYIHSS  60
           MLPC  LM SAEP LLFPVITGNS P+NPLPPAPPQFL FSLH ACSEIPVFHSSYIHSS
Sbjct  1   MLPCPVLMVSAEPYLLFPVITGNSGPGNPLPPAPPQFLPFSLHHACSEIPVFHSSYIHSS  60

Query  61  HCNKVSSNNKNHALCYQRKDIFIL  84
           HCNKVSSNNKNHA+CYQRK+IFIL
Sbjct  61  HCNKVSSNNKNHAFCYQRKGIFIL  84