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Homologs of SE0041 gene of NC_004461_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE0041
( NP_763596.1 )

Abi-alpha protein

NC_004461
(Staphylococcus epidermidis ATCC 12228)

1e-167

100

2) MS7_0074
( YP_005756541.1 )

divergent AAA domain-containing protein

NC_017351
(Staphylococcus aureus 11819-97)

2e-167

3) OG1RF_10804
( YP_005707861.1 )

ATP-binding protein

NC_017316
(Enterococcus faecalis OG1RF)

4e-75

• Sequence Alignments

1) SE0041 in NC_004461


> NC_004461_R1|19|G19|27466959|NP_763596.1|Staphylococcus_epidermidis_ATCC_12228|+|17427..18581|-|SE0041|Abi-alpha 
protein
Length=384

 Score =  582 bits (2199),  Expect = 1e-167, Method: Compositional matrix adjust.
 Identities = 360/360 (100%), Positives = 360/360 (100%), Gaps = 0/360 (0%)

Query  1    MLKHKIINLIQEKREGSYWDFKAEYHKDKAELLHDIICLSNNLLNQEAYLILGVADNGHI  60
            MLKHKIINLIQEKREGSYWDFKAEYHKDKAELLHDIICLSNNLLNQEAYLILGVADNGHI
Sbjct  1    MLKHKIINLIQEKREGSYWDFKAEYHKDKAELLHDIICLSNNLLNQEAYLILGVADNGHI  60

Query  61   LGVAGDSNRKNQEELISFITGKKFAAGRHPKISLMTFEYEEKEIDVIIINPKGYVPYYLE  120
            LGVAGDSNRKNQEELISFITGKKFAAGRHPKISLMTFEYEEKEIDVIIINPKGYVPYYLE
Sbjct  61   LGVAGDSNRKNQEELISFITGKKFAAGRHPKISLMTFEYEEKEIDVIIINPKGYVPYYLE  120

Query  121  RAETDQKSKKNKTVNAGSIYTRVEDKNTPIDSTASPLDTEILWKMHFGLYPTPIKRLQNY  180
            RAETDQKSKKNKTVNAGSIYTRVEDKNTPIDSTASPLDTEILWKMHFGLYPTPIKRLQNY
Sbjct  121  RAETDQKSKKNKTVNAGSIYTRVEDKNTPIDSTASPLDTEILWKMHFGLYPTPIKRLQNY  180

Query  181  LLTPEKWMQNSTGYFHSESPEYIVYKNEDIEEKENYFNLVSPFYAYNQINSNTLYSYYEF  240
            LLTPEKWMQNSTGYFHSESPEYIVYKNEDIEEKENYFNLVSPFYAYNQINSNTLYSYYEF
Sbjct  181  LLTPEKWMQNSTGYFHSESPEYIVYKNEDIEEKENYFNLVSPFYAYNQINSNTLYSYYEF  240

Query  241  KYHSTVLYGCRCISLDSGIYTTPVPELGEINFNMHRDDTIYYRYFIEETMLYNIHLFMYK  300
            KYHSTVLYGCRCISLDSGIYTTPVPELGEINFNMHRDDTIYYRYFIEETMLYNIHLFMYK
Sbjct  241  KYHSTVLYGCRCISLDSGIYTTPVPELGEINFNMHRDDTIYYRYFIEETMLYNIHLFMYK  300

Query  301  GDSMEEKFAMDKFLECVLVYKSDVEKELFENYILDNWDKVNQSINENNKRVFGTEHLSQL  360
            GDSMEEKFAMDKFLECVLVYKSDVEKELFENYILDNWDKVNQSINENNKRVFGTEHLSQL
Sbjct  301  GDSMEEKFAMDKFLECVLVYKSDVEKELFENYILDNWDKVNQSINENNKRVFGTEHLSQL  360

2) MS7_0074 in NC_017351


> NC_004461_R1|19|G19|27466959|NP_763596.1|Staphylococcus_epidermidis_ATCC_12228|+|17427..18581|-|SE0041|Abi-alpha 
protein
Length=384

 Score =  581 bits (2196),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 359/360 (99%), Positives = 360/360 (100%), Gaps = 0/360 (0%)

Query  1    MLKHKIINLIQEKREGSYWDFKAEYHKDKAELLHDIICLSNNLLNQEAYLILGVADNGHI  60
            MLKHKIINLIQEKREGSYWDFKAEYHKDKAELLHDIICLSNNLLNQEAYLILGVADNGHI
Sbjct  1    MLKHKIINLIQEKREGSYWDFKAEYHKDKAELLHDIICLSNNLLNQEAYLILGVADNGHI  60

Query  61   LGVAGDSNRKNQEELISFITGKKFAAGRHPKISLMTFEYEEKEIDVIIINPKGYVPYYLE  120
            LGVAGDSNRKNQEELISFITGKKFAAGRHPKISLMTFEYEEKEIDVIIINPKGYVPYYLE
Sbjct  61   LGVAGDSNRKNQEELISFITGKKFAAGRHPKISLMTFEYEEKEIDVIIINPKGYVPYYLE  120

Query  121  KAETDQKSKKNKTVNAGSIYTRVEDKNTPIDSTASPLDTEILWKMHFGLYPTPIKRLQNY  180
            +AETDQKSKKNKTVNAGSIYTRVEDKNTPIDSTASPLDTEILWKMHFGLYPTPIKRLQNY
Sbjct  121  RAETDQKSKKNKTVNAGSIYTRVEDKNTPIDSTASPLDTEILWKMHFGLYPTPIKRLQNY  180

Query  181  LLTPEKWMQNSTGYFHSESPEYIVYKNEDIEEKENYFNLVSPFYAYNQINSNTLYSYYEF  240
            LLTPEKWMQNSTGYFHSESPEYIVYKNEDIEEKENYFNLVSPFYAYNQINSNTLYSYYEF
Sbjct  181  LLTPEKWMQNSTGYFHSESPEYIVYKNEDIEEKENYFNLVSPFYAYNQINSNTLYSYYEF  240

Query  241  KYHSTVLYGCRCISLDSGIYTTPVPELGEINFNMHRDDTIYYRYFIEETMLYNIHLFMYK  300
            KYHSTVLYGCRCISLDSGIYTTPVPELGEINFNMHRDDTIYYRYFIEETMLYNIHLFMYK
Sbjct  241  KYHSTVLYGCRCISLDSGIYTTPVPELGEINFNMHRDDTIYYRYFIEETMLYNIHLFMYK  300

Query  301  GDSMEEKFAMDKFLECVLVYKSDVEKELFENYILDNWDKVNQSINENNKRVFGTEHLSQL  360
            GDSMEEKFAMDKFLECVLVYKSDVEKELFENYILDNWDKVNQSINENNKRVFGTEHLSQL
Sbjct  301  GDSMEEKFAMDKFLECVLVYKSDVEKELFENYILDNWDKVNQSINENNKRVFGTEHLSQL  360

3) OG1RF_10804 in NC_017316


> NC_004461_R1|19|G19|27466959|NP_763596.1|Staphylococcus_epidermidis_ATCC_12228|+|17427..18581|-|SE0041|Abi-alpha 
protein
Length=384

 Score =  275 bits (1027),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 171/350 (49%), Positives = 243/350 (70%), Gaps = 9/350 (2%)

Query  1    MLETEILELICEKREGAYWDFKQEYHENKAKLLHDIICLANNLENRNAYLIFGISDSGEV  60
            ML   I++LI EKREG+YWDFK EYH +KA LLHDIICL+NNL N++AYLI+G++D+G++
Sbjct  1    MLKHKIINLIQEKREGSYWDFKAEYHKDKAELLHDIICLSNNLLNQEAYLILGVADNGHI  60

Query  61   IGVEQDAKRKNQEHMVSFMQGKKFAGENTPYITLKTMIIEAHEIDVLIIKHTDKVPFYLA  120
            +GV  D++RKNQE+++SF+ GKKFA+   P I+L T   E  EIDV+II+  + VP+YL 
Sbjct  61   LGVAGDSNRKNQEELISFITGKKFAAGRHPKISLMTFEYEEKEIDVIIINPKGYVPYYLE  120

Query  121  EPFRDGRT----TVGAGNIYIRVEDRNTPIDKTASPQHTEELWKRRFGLTPFPLQRLNKM  176
             +  D ++    TV AG+IY RVED+NTPID TASP +TE LWK +FGL P P++RL++ 
Sbjct  121  RAETDQKSKKNKTVNAGSIYTRVEDKNTPIDSTASPLDTEILWKMHFGLYPTPIKRLQNY  180

Query  177  LIQKKHWKTNENGYYFEESPEFTIVTNDE----HEYSRLKGVPFYAYNQTNSKIIYNYYE  232
            L+    W  N  GY+  ESPE+ +  N++    ++Y  L + PFYAYNQ NS+ +Y+YYE
Sbjct  181  LLTPEKWMQNSTGYFHSESPEYIVYKNEDIEEKENYFNLVS-PFYAYNQINSNTLYSYYE  239

Query  233  CRYHGTTLYETQTIALDAGRYHTPVPEKGFIRYDNAHGPLLDYRYFVKGTTKYYLHEFMV  292
             +YH+T LY  + I+LD+G Y TPVPE G I ++  ++  + YRYF+  T  Y +H FM 
Sbjct  240  FKYHSTVLYGCRCISLDSGIYTTPVPELGEINFNMHRDDTIYYRYFIEETMLYNIHLFMY  299

Query  293  DSDSDEARTALRKFLKVVLVFESDEEREQFESHIKNNFSDILKRLESAVK  342
             +DS E + A+ KFL  VLV+ SD E+E FE+ I +N   + + ++   K
Sbjct  300  KGDSMEEKFAMDKFLECVLVYKSDVEKELFENYILDNWDKVNQSINENNK  349