Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of y2410 gene of NC_004088_P1

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) E2348C_2909
( - )

NC_011601
(Escherichia coli E2348/69)

0.0

2) unnamed
( - )

NC_007608
(Shigella boydii Sb227)

0.0

3) ECED1_5133
( - )

NC_011745
(Escherichia coli ED1a)

0.0

99.5

• Sequence Alignments

1) E2348C_2909 in NC_011601


>NC_004088_P1|19|G18|22126294|NP_669717.1|Yersinia_pestis_KIM|-|34017..34799|-|y2410|transposase/IS 
          Length = 783

 Score = 1423 bits (3672), Expect = 0.0
 Identities = 735/750 (98%)
 Strand = Plus / Plus

Query: 1   atgatggaactgcaacatcaacgactgatggcgctcgccgggcagttgcaaccggaaagc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4   atgatggaactgcaacatcaacgactgatggcgctcgccgggcagttgcaactggaaagc 63

Query: 61  cttataagcgcagcgcctgcgttgtcacaacaggcagtagaccaggaatggagttatatg 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 64  cttataagcgcagcgcctgcgctgtcacaacaggcagtagaccaggaatggagttatatg 123

Query: 121 gactttctggagcatcggcttcatgaagaaaaactggcacgtcatcaacgtaaacaggcg 180
           ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gacttcctggagcatctgcttcatgaagaaaaactggcacgtcatcaacgtaaacaggcg 183

Query: 181 atgtatacccgaatggcagccttcccggcggtgaaaacgttcgaagagtatgacttcaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atgtatacccgaatggcagccttcccggcggtgaaaacgttcgaagagtatgacttcaca 243

Query: 241 ttcgccaccggagcaccgcagaagcaactccagtcgttacgctcactcagcttcatagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttcgccaccggagcaccgcagaagcaactccagtcgttacgctcactcagcttcatagaa 303

Query: 301 cgtaatgaaaatatcgtattactggggccatcaggtgtggggaaaacccatctggcaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cgtaatgaaaatatcgtattactggggccatcaggtgtggggaaaacccatctggcaata 363

Query: 361 gcgatgggctaggaagcagtccgtgcaggtatcaaggttcgcttcacaacagcagcagat 420
           ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 364 gcgatgggctatgaagcagtccgtgcaggtatcaaagttcgcttcacaacagcagcagat 423

Query: 421 ctgttacttcagttatttacggcacaacgtcagggccgttataaaacgacgcttcagcgt 480
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctgttacttcagttatctacggcacaacgtcagggccgttataaaacgacgcttcagcgt 483

Query: 481 ggagtaatgaccccccgcctgctcatcattgatgaaataggctatctgccgttcagtcag 540
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggagtaatggccccccgcctgctcatcattgatgaaataggctatctgccgttcagtcag 543

Query: 541 gaagaagcaaagctgtacttccaggtcatcgctaaacgttacgaaaagagcgcaatgatc 600
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaagaagcaaagctgttcttccaggtcatcgctaaacgttacgaaaagagcgcaatgatc 603

Query: 601 ctgacatccaatttgtcgttcgggcagtgggatcaaacgttcgccggtgatgcagccctg 660
           |||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 604 ctgacatccaatctgccgttcgggcagtgggatcaaacgttcgccggtgatgcagcactg 663

Query: 661 acctcagcgatgctggaccgtatcttacactactcacatgtcattcaaatcaaaggagaa 720
           |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 664 acctcagcgatgctggaccgtatcttacaccactcacatgtcgttcaaatcaaaggagaa 723

Query: 721 agctatcgactcagatagaaacgaaaggcc 750
           ||||||||||||||| ||||||||||||||
Sbjct: 724 agctatcgactcagacagaaacgaaaggcc 753

2) unnamed in NC_007608


>NC_004088_P1|19|G18|22126294|NP_669717.1|Yersinia_pestis_KIM|-|34017..34799|-|y2410|transposase/IS 
          Length = 783

 Score = 1398 bits (3607), Expect = 0.0
 Identities = 718/725 (99%)
 Strand = Plus / Plus

Query: 1   aaagccttataagcgcagcgcctgcgctgtcacaacaggcagtagaccaggaatggagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59  aaagccttataagcgcagcgcctgcgctgtcacaacaggcagtagaccaggaatggagtt 118

Query: 61  atatggacttcctggagcatctgcttcatgaagaaaaactggcacgtcatcaacgtaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atatggacttcctggagcatctgcttcatgaagaaaaactggcacgtcatcaacgtaaac 178

Query: 121 aggcgatgtatacccgaatggcagccttcccggcggtgaaaacgttcgaagagtatgact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aggcgatgtatacccgaatggcagccttcccggcggtgaaaacgttcgaagagtatgact 238

Query: 181 tcacattcgccaccggagcaccgcagaagcaactccagtcgttacgctcactcagcttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tcacattcgccaccggagcaccgcagaagcaactccagtcgttacgctcactcagcttca 298

Query: 241 tagaacgtaatgaaaatatcgtattactggggccatcaggtgtggggaaaacccatctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tagaacgtaatgaaaatatcgtattactggggccatcaggtgtggggaaaacccatctgg 358

Query: 301 caatcgcgatgggctatgaagcagtccgtgcaggtatccaagttcgcttcacaacagcag 360
           |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 359 caatagcgatgggctatgaagcagtccgtgcaggtatcaaagttcgcttcacaacagcag 418

Query: 361 cagatctgttacttcagttatctacggcacaacgtcagggccgttataaaacgacgcttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cagatctgttacttcagttatctacggcacaacgtcagggccgttataaaacgacgcttc 478

Query: 421 agcgtggagtaatggccccccgcctgctcatcattgatgaaataggctatctgccgttca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agcgtggagtaatggccccccgcctgctcatcattgatgaaataggctatctgccgttca 538

Query: 481 gtcagaaagaagcaaaactgttcttccaggtcatcgctaaacgttatgaaaagagcgcaa 540
           ||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 539 gtcaggaagaagcaaagctgttcttccaggtcatcgctaaacgttacgaaaagagcgcaa 598

Query: 541 tgatcctgacatccaatctaccgttcgggcagtgggatcaaacgttcgccggtgatgcag 600
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgatcctgacatccaatctgccgttcgggcagtgggatcaaacgttcgccggtgatgcag 658

Query: 601 cactgacctcagcgatgctgggccgtatcttacaccactcacatgtcgttcaaatcaaag 660
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cactgacctcagcgatgctggaccgtatcttacaccactcacatgtcgttcaaatcaaag 718

Query: 661 gagaaagctatcgactcagacagaaacgaaaggccggggttatagcagaagctaatcctg 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gagaaagctatcgactcagacagaaacgaaaggccggggttatagcagaagctaatcctg 778

Query: 721 agtaa 725
           |||||
Sbjct: 779 agtaa 783

3) ECED1_5133 in NC_011745


>NC_004088_P1|19|G18|22126294|NP_669717.1|Yersinia_pestis_KIM|-|34017..34799|-|y2410|transposase/IS 
          Length = 783

 Score = 1165 bits (3006), Expect = 0.0
 Identities = 597/600 (100%)
 Strand = Plus / Plus

Query: 1   atgtatacccgaatggcagccttcccggcggtgaaaacgttcgaagagtatgacttcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atgtatacccgaatggcagccttcccggcggtgaaaacgttcgaagagtatgacttcaca 243

Query: 61  ttcgccaccggagcaccgcagaagcaactccagtcgttacgctcactcagcttcatagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttcgccaccggagcaccgcagaagcaactccagtcgttacgctcactcagcttcatagaa 303

Query: 121 cgtaatgaaaatatcgtattactggggccatcaggtgtggggaaaacccatctggcaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cgtaatgaaaatatcgtattactggggccatcaggtgtggggaaaacccatctggcaata 363

Query: 181 gcgatgggctatgaagcagtccgtgcaggtatcaaggttcgcttcacaacagcagcagat 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 364 gcgatgggctatgaagcagtccgtgcaggtatcaaagttcgcttcacaacagcagcagat 423

Query: 241 ctgttacttcagttatctacggcacaacgtcagggccgttataaaacgacgcttcagcgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctgttacttcagttatctacggcacaacgtcagggccgttataaaacgacgcttcagcgt 483

Query: 301 ggagtaatggccccccgcctgctcatcattgatgaaataggctatctgccgttcagtcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggagtaatggccccccgcctgctcatcattgatgaaataggctatctgccgttcagtcag 543

Query: 361 gaagaagcaaaactgttcttccaggtcatcgctaaacgttacgaaaagagcgcaatgatc 420
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaagaagcaaagctgttcttccaggtcatcgctaaacgttacgaaaagagcgcaatgatc 603

Query: 421 ctgacatccaatctgccgttcgggcagtgggatcaaacgttcgccggtgatgcagcactg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctgacatccaatctgccgttcgggcagtgggatcaaacgttcgccggtgatgcagcactg 663

Query: 481 acctcagcgatgctggaccgtatcttacaccactcacatgtcgttcaaatcaaaggagaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 acctcagcgatgctggaccgtatcttacaccactcacatgtcgttcaaatcaaaggagaa 723

Query: 541 agctatcgactcagacagaaacgaaaggccggggttatagctgaagctaatcctgagtaa 600
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 724 agctatcgactcagacagaaacgaaaggccggggttatagcagaagctaatcctgagtaa 783